Sed0022402 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTCTTTCATCATTTTCAGTTCAGCCATTGAAATTTTCAGAACCAGCTCAAAATGATGGTGAGTTAACTCTGTTTTATTAATGCTCTTTTTTTTTTTCTGAATTATTTGTTAGGAATGAATATCACTAACATATTATCAAAGCCACACACATGCAGCTTTAAGAGTCACAAAAAAAAAAAAAATCCCTTATAAACAAAAAGAGATTAAATTTTTTTATTTTTAGTTTTTTAAAGTGTCACATCATCAACCGCATGTATGGGGTGCAGCCACATCTGCATCTAAATCTTTTTCTTGATATGTATTTTCATGCGTTTATGTTAAAAAAGATTTAGGTGGAGTTCAGACTGCAGCAAAATCGCATGTCACCCCTTTAATGACCACAATAAAAAAAAAAAACATTGTGGTCATTAAAGTTGTAGTATATGATTGGGGTGCAACCTGAGCTCCACCTAAATCTTCCTCGTTCTTGTTTGAGGATGTGGTTTTATATACTAACAGTACTATTTTGTGTGTAGAAAGTGCAGGTGGAAGTGAACTTACATGACGACAAAGAAAAGCGAAAGGCCTTGAAATCAGTTTCTGATCTTCTAGGTAGTAATAATCAATCCCTCTAAAACACTCCCAACTATTTCCACCATAGATTAATACATAAAAACACCATTCACTACTCTCTTTCTAAGTTGTTGATGCCAAAATTTTAAATAAAGAAAAATTTCTCTACACATTAGGAAATGTAACTTAAAACACATATTTCATAATTTGAGGCCATACCATTATTTTATAAAAAAAAGAAGAAAAAAAAATTGTTTGATGATGTTATGTGTATCTTAAGTTGGGTTCCTCTGTATGTAAGCTTTTCTATTTAAATATATATTTCTAGATTCCGTTCTATATTTAGACAAAATATTAGAAGAAAATTGTATTGCATGACTTTTGAGCATTTCAGTTTTAAATTTCTATATTTTGTATACTTTTTTATAACTAAATTGTGTATACTAATTGAGTAAGAATGGTATTTGAGAAGAGTTTTATGTAATTGAGAAGTAGGCGAAAGAATTTAGTGTGTTTGTAACCATTTTTCACGTACTTTAAAAAAAAAGTACGATAACTTTTTTCAATTTCAAAGTTTTCCACGTAAATTCTTGTGTTTTCTTATTTCAATTTTTTGATAATCATATCGATTTATTCCTACAATAATAAGAAAGGTTTTTCCCAACAAACCTGCCATAATTTCTACTTGCAGGAATTCGATCAATTGCAGTGAAGGACAAGAACATAACTGTAAATGGAAATGTAAACCCCATTGATGTGCATGCTAAGGTTCAAAAGCATTGGCCCGACGCCAAGCTCGTGAAGGTCGAGGAGATCAAGTCGGTAAAGCCGAACAAAGAACCAGAGAAGGCAAAGACAAACAAAGAAGCAGTGAAGCAAAAACCAAACAAAGAAGTAGAGAAAGCAAAGCCAAACAGCTCTGTTAAAAGAGCTGGTTAAAAGAAGAGGTTTCTTTTGGTAAAACAGTCTTATTTTGTTTATAACTGTATTCATAATCGTAGTGTGTTATATGGATCCACATGTCATTGTAGTTTTGATCACTTTATCAATCAAATTTCTCTTTTTTATGAGCACTTTTATTTCTTACTTTTACAAATGAGACTACATTTTATTTATATTCTCAAACAATTTTACAAGTTTTTCTCGGTACGATAGATTTGAATTGAAATTTTAATCAACAAAGAAAGGGTATCTCAAATTAGAAGAATATTTTGTGATGATAAAAAAAAATTAGTGAAACAATATCAGATGCGAGT CTTCTTTCATCATTTTCAGTTCAGCCATTGAAATTTTCAGAACCAGCTCAAAATGATGAAAGTGCAGGTGGAAGTGAACTTACATGACGACAAAGAAAAGCGAAAGGCCTTGAAATCAGTTTCTGATCTTCTAGGAATTCGATCAATTGCAGTGAAGGACAAGAACATAACTGTAAATGGAAATGTAAACCCCATTGATGTGCATGCTAAGGTTCAAAAGCATTGGCCCGACGCCAAGCTCGTGAAGGTCGAGGAGATCAAGTCGGTAAAGCCGAACAAAGAACCAGAGAAGGCAAAGACAAACAAAGAAGCAGTGAAGCAAAAACCAAACAAAGAAGTAGAGAAAGCAAAGCCAAACAGCTCTGTTAAAAGAGCTGGTTAAAAGAAGAGGTTTCTTTTGGTAAAACAGTCTTATTTTGTTTATAACTGTATTCATAATCGTAGTGTGTTATATGGATCCACATGTCATTGTAGTTTTGATCACTTTATCAATCAAATTTCTCTTTTTTATGAGCACTTTTATTTCTTACTTTTACAAATGAGACTACATTTTATTTATATTCTCAAACAATTTTACAAGTTTTTCTCGGTACGATAGATTTGAATTGAAATTTTAATCAACAAAGAAAGGGTATCTCAAATTAGAAGAATATTTTGTGATGATAAAAAAAAATTAGTGAAACAATATCAGATGCGAGT ATGATGAAAGTGCAGGTGGAAGTGAACTTACATGACGACAAAGAAAAGCGAAAGGCCTTGAAATCAGTTTCTGATCTTCTAGGAATTCGATCAATTGCAGTGAAGGACAAGAACATAACTGTAAATGGAAATGTAAACCCCATTGATGTGCATGCTAAGGTTCAAAAGCATTGGCCCGACGCCAAGCTCGTGAAGGTCGAGGAGATCAAGTCGGTAAAGCCGAACAAAGAACCAGAGAAGGCAAAGACAAACAAAGAAGCAGTGAAGCAAAAACCAAACAAAGAAGTAGAGAAAGCAAAGCCAAACAGCTCTGTTAAAAGAGCTGGTTAA MMKVQVEVNLHDDKEKRKALKSVSDLLGIRSIAVKDKNITVNGNVNPIDVHAKVQKHWPDAKLVKVEEIKSVKPNKEPEKAKTNKEAVKQKPNKEVEKAKPNSSVKRAG Homology
BLAST of Sed0022402 vs. NCBI nr
Match: XP_022157166.1 (heavy metal-associated isoprenylated plant protein 39-like [Momordica charantia]) HSP 1 Score: 77.8 bits (190), Expect = 6.5e-11 Identity = 45/96 (46.88%), Postives = 68/96 (70.83%), Query Frame = 0
BLAST of Sed0022402 vs. NCBI nr
Match: XP_011654720.1 (heavy metal-associated isoprenylated plant protein 39 isoform X2 [Cucumis sativus] >XP_031741997.1 heavy metal-associated isoprenylated plant protein 39 isoform X3 [Cucumis sativus] >KGN50059.1 hypothetical protein Csa_000173 [Cucumis sativus]) HSP 1 Score: 77.4 bits (189), Expect = 8.4e-11 Identity = 48/89 (53.93%), Postives = 65/89 (73.03%), Query Frame = 0
BLAST of Sed0022402 vs. NCBI nr
Match: XP_008437334.1 (PREDICTED: heavy metal-associated isoprenylated plant protein 3-like [Cucumis melo]) HSP 1 Score: 77.0 bits (188), Expect = 1.1e-10 Identity = 48/89 (53.93%), Postives = 64/89 (71.91%), Query Frame = 0
BLAST of Sed0022402 vs. NCBI nr
Match: KAA0042722.1 (heavy metal-associated isoprenylated plant protein 3-like [Cucumis melo var. makuwa]) HSP 1 Score: 75.9 bits (185), Expect = 2.5e-10 Identity = 47/87 (54.02%), Postives = 63/87 (72.41%), Query Frame = 0
BLAST of Sed0022402 vs. NCBI nr
Match: XP_008437332.1 (PREDICTED: heavy metal-associated isoprenylated plant protein 3 [Cucumis melo]) HSP 1 Score: 75.5 bits (184), Expect = 3.2e-10 Identity = 48/93 (51.61%), Postives = 63/93 (67.74%), Query Frame = 0
BLAST of Sed0022402 vs. ExPASy Swiss-Prot
Match: O03982 (Heavy metal-associated isoprenylated plant protein 39 OS=Arabidopsis thaliana OX=3702 GN=HIPP39 PE=2 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 9.7e-10 Identity = 49/119 (41.18%), Postives = 72/119 (60.50%), Query Frame = 0
BLAST of Sed0022402 vs. ExPASy TrEMBL
Match: A0A6J1DX64 (heavy metal-associated isoprenylated plant protein 39-like OS=Momordica charantia OX=3673 GN=LOC111023948 PE=4 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 3.1e-11 Identity = 45/96 (46.88%), Postives = 68/96 (70.83%), Query Frame = 0
BLAST of Sed0022402 vs. ExPASy TrEMBL
Match: A0A0A0KMH8 (HMA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G152240 PE=4 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 4.1e-11 Identity = 48/89 (53.93%), Postives = 65/89 (73.03%), Query Frame = 0
BLAST of Sed0022402 vs. ExPASy TrEMBL
Match: A0A1S3AUD2 (heavy metal-associated isoprenylated plant protein 3-like OS=Cucumis melo OX=3656 GN=LOC103482786 PE=4 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 5.3e-11 Identity = 48/89 (53.93%), Postives = 64/89 (71.91%), Query Frame = 0
BLAST of Sed0022402 vs. ExPASy TrEMBL
Match: A0A5A7TH40 (Heavy metal-associated isoprenylated plant protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G002210 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 1.2e-10 Identity = 47/87 (54.02%), Postives = 63/87 (72.41%), Query Frame = 0
BLAST of Sed0022402 vs. ExPASy TrEMBL
Match: A0A1S3ATW9 (heavy metal-associated isoprenylated plant protein 3 OS=Cucumis melo OX=3656 GN=LOC103482784 PE=4 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 1.6e-10 Identity = 48/93 (51.61%), Postives = 63/93 (67.74%), Query Frame = 0
BLAST of Sed0022402 vs. TAIR 10
Match: AT1G01490.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 64.3 bits (155), Expect = 6.9e-11 Identity = 49/119 (41.18%), Postives = 72/119 (60.50%), Query Frame = 0
BLAST of Sed0022402 vs. TAIR 10
Match: AT1G01490.2 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 64.3 bits (155), Expect = 6.9e-11 Identity = 49/119 (41.18%), Postives = 72/119 (60.50%), Query Frame = 0
BLAST of Sed0022402 vs. TAIR 10
Match: AT5G52740.1 (Copper transport protein family ) HSP 1 Score: 42.0 bits (97), Expect = 3.7e-04 Identity = 29/82 (35.37%), Postives = 47/82 (57.32%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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