Sed0022384 (gene) Chayote v1

Overview
NameSed0022384
Typegene
OrganismSechium edule (Chayote v1)
DescriptionPaternally-expressed gene 3 protein
LocationLG03: 8848638 .. 8850032 (-)
RNA-Seq ExpressionSed0022384
SyntenySed0022384
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGCATCTCATTGCAAGGTCGTTTATAGTGCATCCTGCAACAAGGTCGTTTATGGCGCATCTCATCGCAAGGTCGTTTATAGCTCATCCCATCGCAAAGCGCACCCTGCGAAAAGGTCGTTTATAGCGCATCCCGCGACAAGGTTGTTCATAGTGCATCCCGCGACAAGGTCGTTCATAGTGCATCCTGCAACAAGGTCGTTTATGGCGCATCTCATCGCAAGGTCGTTTATAGTGCATCCTGCAACAAGGTCGTTTATAGCGCATCCTGCAACAAGGTCGTTTATAGCGCATCCTGCAACAAGGTCGCTTATAGCGCATCCCGCAACAAGGTCGCTTTATAGCGCATCCCGCAACAAGGTCGCTTTATAGCGCATCCCGCAACAAGGTCGCTTTATAGCGCATCCTGCAACAAGGTCGTTTATAGCGCATCCTGCAACAAGGTCGTTTATAGCGCATCCTGCAACAAGGTCGTTTATAGCGCATCCTGCAACAAGGTCGTTTATAGCGCATCCTGCAACAAGGTCGTTTATAGCGCATCCTGCAACAAGGTCGTTTATAGCGCATCCTGCAACAAGGTCGTTTATAGCGCATCCTGCAACAAAGTCGTTTATAGCGCATCCTGCAACAAAGTCGTTTATAGCGCATCCTGCAACAAGGTCGTTTATAGCGCATCCAGCAACAAGGTCGTTTACAGCGCATCCCGTCACAAGGTCATTTATAGCGCATCTCGTTGCAAAGCGCACTCAGCCACAAGGTCGTTTATAGCACATCCGGTGACAAGGTCATTTATAGCATCATCAAGGGTCATCTATAGCATCATCAAAGGTCAGATCTCATGGAGGATCGGGTATCTTATTTTATCTCTATGAGATGAGAAGCGTCTTTGCAACAAATTCTCGACCGAAAAAAGCTCTCAAGTGGCCAAATCTTGTTTAGAAAAAAAAAAAAAAAAAAACATTTTGAAGAAAAAAATGTTTAAAACTAAAAGGGTCATTTAAACCAAAAGTTGTGGGATCTTTTCAATATTTTCAATCCATTCAGTATGAATATGTTGATCACTAAGGTTGTTCCATTAAAAGTCAGTTGCTATTTAAAGAAAATTATGATAAATTTTGTCAAATTAAAAGGGTTATTGCAATTTGGAAGAATAAAGTCTAAACCATATTCAAGATAAAAATTCAAACTAAGATTAAAAAAAAAAAAAAGGAGACAAGACTATCAATGAAGCAAAAAAAGCTCACAATCCTCATATATTCAACCAAAATTTATGGTACAAGATCCAAAAGAAATATGTGATCATGATGGATAGAAATACAAAAAAAAAAGAGATTGTTGTAATATGGTTACTGTGATAAAGAAAAAAGAAATCTTTTACTCCCATGATTCAATC

mRNA sequence

ATGGCGCATCTCATTGCAAGGTCGTTTATAGTGCATCCTGCAACAAGGTCGTTTATGGCGCATCTCATCGCAAGGTCGTTTATAGCGCATCCTGCAACAAGGTCGTTTATAGCGCATCCTGCAACAAGGTCGTTTATAGCGCATCCTGCAACAAGGTCGTTTATAGCGCATCCTGCAACAAGGTCGTTTATAGCGCATCCTGCAACAAGGTCGTTTATAGCGCATCCTGCAACAAGGTCGTTTATAGCGCATCCTGCAACAAAGTCGTTTATAGCGCATCCTGCAACAAAGTCGTTTATAGCGCATCCTGCAACAAGGTCGTTTATAGCGCATCCAGCAACAAGGTCGTTTACAGCGCATCCCGTCACAAGGTCATTTATAGCGCATCTCGTTGCAAAGCGCACTCAGCCACAAGGTCGTTTATAGCACATCCGGTGACAAGGTCATTTATAGCATCATCAAGGGTCATCTATAGCATCATCAAAGGTCAGATCTCATGGAGGATCGGGTATCTTATTTTATCTCTATGAGATGAGAAGCGTCTTTGCAACAAATTCTCGACCGAAAAAAGCTCTCAAGTGGCCAAATCTTGTTTAGAAAAAAAAAAAAAAAAAAACATTTTGAAGAAAAAAATGTTTAAAACTAAAAGGGTCATTTAAACCAAAAGTTGTGGGATCTTTTCAATATTTTCAATCCATTCAGTATGAATATGTTGATCACTAAGGTTGTTCCATTAAAAGTCAGTTGCTATTTAAAGAAAATTATGATAAATTTTGTCAAATTAAAAGGGTTATTGCAATTTGGAAGAATAAAGTCTAAACCATATTCAAGATAAAAATTCAAACTAAGATTAAAAAAAAAAAAAAGGAGACAAGACTATCAATGAAGCAAAAAAAGCTCACAATCCTCATATATTCAACCAAAATTTATGGTACAAGATCCAAAAGAAATATGTGATCATGATGGATAGAAATACAAAAAAAAAAGAGATTGTTGTAATATGGTTACTGTGATAAAGAAAAAAGAAATCTTTTACTCCCATGATTCAATC

Coding sequence (CDS)

ATGGCGCATCTCATTGCAAGGTCGTTTATAGTGCATCCTGCAACAAGGTCGTTTATGGCGCATCTCATCGCAAGGTCGTTTATAGCGCATCCTGCAACAAGGTCGTTTATAGCGCATCCTGCAACAAGGTCGTTTATAGCGCATCCTGCAACAAGGTCGTTTATAGCGCATCCTGCAACAAGGTCGTTTATAGCGCATCCTGCAACAAGGTCGTTTATAGCGCATCCTGCAACAAGGTCGTTTATAGCGCATCCTGCAACAAAGTCGTTTATAGCGCATCCTGCAACAAAGTCGTTTATAGCGCATCCTGCAACAAGGTCGTTTATAGCGCATCCAGCAACAAGGTCGTTTACAGCGCATCCCGTCACAAGGTCATTTATAGCGCATCTCGTTGCAAAGCGCACTCAGCCACAAGGTCGTTTATAG

Protein sequence

MAHLIARSFIVHPATRSFMAHLIARSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATKSFIAHPATKSFIAHPATRSFIAHPATRSFTAHPVTRSFIAHLVAKRTQPQGRL
Homology
BLAST of Sed0022384 vs. NCBI nr
Match: CAB1324049.1 (unnamed protein product, partial [Coregonus sp. 'balchen'])

HSP 1 Score: 93.2 bits (230), Expect = 1.9e-15
Identity = 64/130 (49.23%), Postives = 80/130 (61.54%), Query Frame = 0

Query: 2   AHLIARSFIVHPATRSFMAHLIARSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATR 61
           AH  + S   HPA+ S  AH  + S  AHPA+ S  AHPA+ S  AHPA+ S  AHPA+ 
Sbjct: 616 AHPASSSSPAHPASSSSPAHPASSSSPAHPASSSSPAHPASSSSPAHPASSSSPAHPASS 675

Query: 62  SFIAHPATRSFIAHPATRSFI--AHPATKSFIAHPATKSFIAHPATRSFIAHPATRSFTA 121
           S  AHPA+ S  AHPA+ S    AHPA+ S  +HPA+ S  AHPA+ S  AHPA+ S  A
Sbjct: 676 SSPAHPASSSSPAHPASSSSSSPAHPASSSSPSHPASISSPAHPASSSSPAHPASSSSPA 735

Query: 122 HPVTRSFIAH 130
           HP + S  +H
Sbjct: 736 HPASSSSPSH 745

BLAST of Sed0022384 vs. NCBI nr
Match: WP_052045004.1 (M10 family metallopeptidase C-terminal domain-containing protein [Arsenophonus endosymbiont of Nilaparvata lugens])

HSP 1 Score: 89.0 bits (219), Expect = 3.6e-14
Identity = 58/132 (43.94%), Postives = 74/132 (56.06%), Query Frame = 0

Query: 2   AHLIARSFIVHPATRSFMAHLIARSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATR 61
           AH    +   HP T +  AH    +  AH AT +  AHP T++  AHPAT +  AHPAT 
Sbjct: 114 AHPPTTTPTAHPTTTTPTAHPTTTTPTAHLATTTPTAHP-TKTPTAHPATTTPTAHPATT 173

Query: 62  SFIAHPATRSFIAHPATRSFIAHPATKSFIAHPATKSFIAHPATRSFIAHPATRSFTAHP 121
           +  AHP T +  AHPAT +  AHP T +  AHP T +  AHP T +   HP T + TAHP
Sbjct: 174 TSTAHPTTTTPTAHPATTTSTAHPTTTTPTAHPPTTTPTAHPTTTTSTVHPTTTTSTAHP 233

Query: 122 VTRSFIAHLVAK 134
            T S I+H+  K
Sbjct: 234 TTTSPISHVKIK 244

BLAST of Sed0022384 vs. NCBI nr
Match: KAE8578264.1 (hypothetical protein XENTR_v10023422 [Xenopus tropicalis])

HSP 1 Score: 89.0 bits (219), Expect = 3.6e-14
Identity = 44/120 (36.67%), Postives = 70/120 (58.33%), Query Frame = 0

Query: 9   FIVHPATRSFMAHLIARSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPA 68
           +IV PA   ++A      +I HPA   ++A PA   ++  PA R ++A PA R +I  PA
Sbjct: 23  YIVQPARCPYVAQPARCPYIVHPARSPYVAQPARCPYVVQPARRPYVAQPARRPYIVQPA 82

Query: 69  TRSFIAHPATRSFIAHPATKSFIAHPATKSFIAHPATRSFIAHPATRSFTAHPVTRSFIA 128
            R ++A PA R ++A PA + ++A PA + ++A PA R ++A PA R + A P    ++A
Sbjct: 83  RRPYVAQPARRPYVAQPARRPYVAQPARRPYVAQPARRPYVAQPARRPYVAQPARCPYVA 142

BLAST of Sed0022384 vs. NCBI nr
Match: KOB65584.1 (hypothetical protein OBRU01_22515, partial [Operophtera brumata])

HSP 1 Score: 87.4 bits (215), Expect = 1.1e-13
Identity = 53/121 (43.80%), Postives = 68/121 (56.20%), Query Frame = 0

Query: 7   RSFIVHPATRSFMAHLIARSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFIAH 66
           RSFIV  A+RSF+     RSF+   A RSF+   A RSFI   A RSF+   A RSF+  
Sbjct: 147 RSFIVEKASRSFLVEKARRSFLVEKARRSFLVEKARRSFIVEKARRSFLVEKARRSFLVE 206

Query: 67  PATRSFIAHPATRSFIAHPATKSFIAHPATKSFIAHPATRSFIAHPATRSFTAHPVTRSF 126
            A RSF+   A R F+   A +SF+   A +SF+ + A RSF+   A RSF      RSF
Sbjct: 207 KARRSFLVEKARRLFLVEKARRSFLVDKARRSFLVYKARRSFLVEKARRSFLVEKAGRSF 266

Query: 127 I 128
           +
Sbjct: 267 L 267

BLAST of Sed0022384 vs. NCBI nr
Match: XP_041694679.1 (lysine-specific demethylase 4A-like [Coregonus clupeaformis])

HSP 1 Score: 81.6 bits (200), Expect = 5.8e-12
Identity = 57/125 (45.60%), Postives = 76/125 (60.80%), Query Frame = 0

Query: 13  PATRSFMAHLIARSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSF 72
           PA+ S  +   + S  A PA+ S  AHPA+ S  AHPA+ S  AHPA+ S  AHPA+ S 
Sbjct: 368 PASSSSPSQPASSSSPAQPASSSSPAHPASSSSPAHPASSSSPAHPASSSSPAHPASSSS 427

Query: 73  IAHPATRSFI--AHPATKSFIAHPATKSFIAHPATRSFIAHPATRSFTAHPVTRSFIAHL 132
            AHPA+ S    AHPA+ S  +HPA+ S  AHPA+ S  AHPA+ S  +HP + S   + 
Sbjct: 428 PAHPASSSSSSPAHPASSSSPSHPASSSSPAHPASSSSPAHPASSSSPSHPASSSSPVYQ 487

Query: 133 VAKRT 136
           + +RT
Sbjct: 488 LFQRT 492

BLAST of Sed0022384 vs. ExPASy Swiss-Prot
Match: Q6H236 (Paternally-expressed gene 3 protein OS=Bos taurus OX=9913 GN=PEG3 PE=2 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.0e-07
Identity = 36/114 (31.58%), Postives = 50/114 (43.86%), Query Frame = 0

Query: 13   PATRSFMAHLIARSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSF 72
            PA  S+       S+   PA  S+   PA  S+   PA  S+   PA  S+   PA  S+
Sbjct: 1388 PAQTSYTEEPAQTSYTEEPAQTSYTQEPAQTSYTEEPAQTSYTEEPAQTSYAQEPAQTSY 1447

Query: 73   IAHPATRSFIAHPATKSFIAHPATKSFIAHPATRSFIAHPATRSFTAHPVTRSF 127
               PA  S+   PA  S+   PA  S+   PA  ++   PA  S+T  P   S+
Sbjct: 1448 AEEPAQTSYAEEPAQTSYAEEPAQTSYTQEPAQTNYTEEPAEASYTEEPAQTSY 1501

BLAST of Sed0022384 vs. ExPASy TrEMBL
Match: A0A6F9AKI9 ([Histone H3]-trimethyl-L-lysine(9) demethylase (Fragment) OS=Coregonus sp. 'balchen' OX=861768 GN=CSTEINMANNI_LOCUS1409068 PE=3 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 9.3e-16
Identity = 64/130 (49.23%), Postives = 80/130 (61.54%), Query Frame = 0

Query: 2   AHLIARSFIVHPATRSFMAHLIARSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATR 61
           AH  + S   HPA+ S  AH  + S  AHPA+ S  AHPA+ S  AHPA+ S  AHPA+ 
Sbjct: 616 AHPASSSSPAHPASSSSPAHPASSSSPAHPASSSSPAHPASSSSPAHPASSSSPAHPASS 675

Query: 62  SFIAHPATRSFIAHPATRSFI--AHPATKSFIAHPATKSFIAHPATRSFIAHPATRSFTA 121
           S  AHPA+ S  AHPA+ S    AHPA+ S  +HPA+ S  AHPA+ S  AHPA+ S  A
Sbjct: 676 SSPAHPASSSSPAHPASSSSSSPAHPASSSSPSHPASISSPAHPASSSSPAHPASSSSPA 735

Query: 122 HPVTRSFIAH 130
           HP + S  +H
Sbjct: 736 HPASSSSPSH 745

BLAST of Sed0022384 vs. ExPASy TrEMBL
Match: A0A0L7KRD6 (Peptidase S1 domain-containing protein (Fragment) OS=Operophtera brumata OX=104452 GN=OBRU01_22515 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 5.1e-14
Identity = 53/121 (43.80%), Postives = 68/121 (56.20%), Query Frame = 0

Query: 7   RSFIVHPATRSFMAHLIARSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFIAH 66
           RSFIV  A+RSF+     RSF+   A RSF+   A RSFI   A RSF+   A RSF+  
Sbjct: 147 RSFIVEKASRSFLVEKARRSFLVEKARRSFLVEKARRSFIVEKARRSFLVEKARRSFLVE 206

Query: 67  PATRSFIAHPATRSFIAHPATKSFIAHPATKSFIAHPATRSFIAHPATRSFTAHPVTRSF 126
            A RSF+   A R F+   A +SF+   A +SF+ + A RSF+   A RSF      RSF
Sbjct: 207 KARRSFLVEKARRLFLVEKARRSFLVDKARRSFLVYKARRSFLVEKARRSFLVEKAGRSF 266

Query: 127 I 128
           +
Sbjct: 267 L 267

BLAST of Sed0022384 vs. ExPASy TrEMBL
Match: A0A5C3L4C9 (Uncharacterized protein (Fragment) OS=Coprinopsis marcescibilis OX=230819 GN=FA15DRAFT_705801 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 2.4e-11
Identity = 54/122 (44.26%), Postives = 54/122 (44.26%), Query Frame = 0

Query: 8   SFIVHPATRSFMAHLIARSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFIAHP 67
           SF  HP   SF  H    SF  HP   SF  HP   SF  HP   SF  HP   SF  HP
Sbjct: 107 SFPPHPPKPSFPPHPPKPSFPPHPPKPSFPPHPPKPSFPPHPPKPSFPPHPPKPSFPPHP 166

Query: 68  ATRSFIAHPATRSFIAHPATKSFIAHPATKSFIAHPATRSFIAHPATRSFTAHPVTRSFI 127
              SF  HP   SF  HP   SF  HP   SF  HP   SF  HP   SF  HP   SF 
Sbjct: 167 PKPSFPPHPPKPSFPPHPPKPSFPPHPPKPSFPPHPPKPSFPPHPPKPSFPPHPPKPSFP 226

Query: 128 AH 130
            H
Sbjct: 227 PH 228

BLAST of Sed0022384 vs. ExPASy TrEMBL
Match: A0A287SZ54 (Uncharacterized protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 2.9e-09
Identity = 50/114 (43.86%), Postives = 55/114 (48.25%), Query Frame = 0

Query: 14  ATRSFMAHLIARSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFI 73
           AT SF+  +   SF    AT S     AT SF  H AT SF   P T SF+   AT SF+
Sbjct: 4   ATASFITEVATASFSRQAATASLTRRAATASFPRHAATASFPRQPTTASFLRQTATASFL 63

Query: 74  AHPATRSFIAHPATKSFIAHPATKSFIAHPATRSFIAHPATRSFTAHPVTRSFI 128
             P T SF   PAT SF+   AT SF    AT SF     T S T    T SFI
Sbjct: 64  RKPTTASFPRQPATASFLRQAATASFSRQAATASFSRQATTASLTRQAATASFI 117

BLAST of Sed0022384 vs. ExPASy TrEMBL
Match: A0A212DDP8 (Uncharacterized protein OS=Cervus elaphus hippelaphus OX=46360 GN=Celaphus_00004913 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.6e-07
Identity = 41/119 (34.45%), Postives = 56/119 (47.06%), Query Frame = 0

Query: 8   SFIVHPATRSFMAHLIARSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFIAHP 67
           S+   PA  S++  L   S+   PA  S+   PA  S+   PA  S+   PA  S+   P
Sbjct: 623 SYTEEPAQTSYIEELAQTSYTEEPAQTSYTEEPAEASYTEKPAQTSYAEEPAQTSYAEEP 682

Query: 68  ATRSFIAHPATRSFIAHPATKSFIAHPATKSFIAHPATRSFIAHPATRSFTAHPVTRSF 127
           A  S+   PA  S+   PA  S+I  PA  S+   PA  S+I  PA  S+T  P   S+
Sbjct: 683 AQTSYAEEPAQTSYAEEPAQTSYIEEPAQTSYTEEPAQASYIEEPAQASYTEEPAEASY 741

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
CAB1324049.11.9e-1549.23unnamed protein product, partial [Coregonus sp. 'balchen'][more]
WP_052045004.13.6e-1443.94M10 family metallopeptidase C-terminal domain-containing protein [Arsenophonus e... [more]
KAE8578264.13.6e-1436.67hypothetical protein XENTR_v10023422 [Xenopus tropicalis][more]
KOB65584.11.1e-1343.80hypothetical protein OBRU01_22515, partial [Operophtera brumata][more]
XP_041694679.15.8e-1245.60lysine-specific demethylase 4A-like [Coregonus clupeaformis][more]
Match NameE-valueIdentityDescription
Q6H2362.0e-0731.58Paternally-expressed gene 3 protein OS=Bos taurus OX=9913 GN=PEG3 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A6F9AKI99.3e-1649.23[Histone H3]-trimethyl-L-lysine(9) demethylase (Fragment) OS=Coregonus sp. 'balc... [more]
A0A0L7KRD65.1e-1443.80Peptidase S1 domain-containing protein (Fragment) OS=Operophtera brumata OX=1044... [more]
A0A5C3L4C92.4e-1144.26Uncharacterized protein (Fragment) OS=Coprinopsis marcescibilis OX=230819 GN=FA1... [more]
A0A287SZ542.9e-0943.86Uncharacterized protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1[more]
A0A212DDP81.6e-0734.45Uncharacterized protein OS=Cervus elaphus hippelaphus OX=46360 GN=Celaphus_00004... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34226FAMILY NOT NAMEDcoord: 7..129
NoneNo IPR availablePANTHERPTHR34226:SF9SUBFAMILY NOT NAMEDcoord: 7..129

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0022384.1Sed0022384.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0110165 cellular anatomical entity