Sed0022382 (gene) Chayote v1

Overview


Name	Sed0022382
Type	gene
Organism	Sechium edule (Chayote v1)
Description	50S ribosomal protein L33-like
Location	LG02: 49168342 .. 49171437 (-)
RNA-Seq Expression	Sed0022382
Synteny	Sed0022382

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTAGGGCATATATGTCATCATATTAATTTTACTATTAATTTCTTGATATCTCTTCCCTTCTGTTCCCAATATCATATCACCTGTTTCGGCGACGGCGGGAAACTTCACTTCGTGTTTTTTCCACGGCGACCGTTCATCGCCCGTTGATCGTTCACCGATTTGAACTGATCTCTCATTATCGCGATTTCTTTACACCATAATTTGATTTCCACCATATTTTCCGGTAAGTTTTGCATTAAATCTTTTCATTTTTCTCTGTTTTGTTTTCGTTTTTTGTATCTGTGGTTTCAAGTCCGATGAGTTGGTTTTCGCTGATTAGAAGTGTGCTATCACTTTAATATTTCTTGGTAATCGCTTCTTTATTTTAATGTATGTGATTGCTGTTGCTCGTAATTTAGAATGAATCAACTATTTGTGTTGAATTTCAAGCTAGGGCTGATTTGGTTTTGGTATAAACTCGATCTCGACCCTGATGGAGATTTGATTATAGTGAAGCTGTACTTAGTACGTTGAGAACTTTGAAAAGTCAGAATGATTGTTAAACAAGCATTTTGTGTCAAGTAATTATAAGCCTTTCACGTCTTACAATTCAGATTAAGTGTGCGAATTGAATCGAATCGAATTCAGTGTTTATTTTTTGTTCTGTTGCTGCTTAGAATAGACCCCTTTTTAAATAGGGTCCTATCTAGTCCCCTAAGGTTAGCTAGCGGAAGATTTGGAATTTGAATGTGTGTTCTCCTCACAGTCCCGTCTCTAAAGGGTGGCACAGTGGTTGAAGACTTGGGCTTTGAGAGTATGCTCCCCTCAAGGTCCCGGGTTCAAGACTCACCTATGACATTACTTCTTCGATATCTCCCGGTGTCTGGCCTAGGGACGGGCGTGGTTTCCCTTATTTCAAAAAAAAAAAAAAATTTGTAGACCCTTCCCATGTGTCTCCATTCCTTCAATATCTCTTGGTGTCTAGCCTAGGATGGGTGTGATTACTCTCGTGGGAGCAAAACTTCAAAAATATATATACATATATGTGTGTGTGTGTGTGTGTGGTCCTATCTAGCTAGGTCTTTCTGTGAGGTGTGATTTTCTGCAGGTTATCAATATGTTCAATAGATGTCCATTTCTGTACATCTTTTCTTCAATACCAAACCATTACTGCTCCCGGTTGTTTTGCTGCTTAACAGGAACATTTACATACTCCTTGCTGCGAAGTTGTGGAAATATTGTGAAAGAAACTATTCATTATGTACATCAACAAGTGAGCGTCCAACTTTTTCACGCAGTTTGGACCATTAGCTACCTGGATCTCTAGGATTTTTTATCCTCAATTTTTTTTTTGTAAAACGACATTGTTTTACTTATTTTATTTTATATCCAATTTTTTTTAACTTAAAAAATAACGGAATAAAAAAAAGATTAAAATACCATTTTGGTCCCTCAACTATACACTGTTTTCTATTTTGTTCTCTAGACTTTCAAAAGTATAATTTTGGTTCCTCAACTTTATCAAATGCTTAAAAATAGTCCTCAAGTTACAAAAAGTTGCGTTTAATTTTTTTTTAAACTCTATGACTTTGACTATTTTTAAGTTTTTGGCAAAGTTGAGAGACTAAAATTGGACTTTTGAAAATCTAGGACCAAAATGCCATGGAACAAAGATATACTTGACTAAACAATGAAAAACAACCCTTTATTAAACCAAAGCCAATTGTTCCCCAATTTCCCCCTTCTTCATTTTGCATTCGCACGAAACCAACCCCCTTTTCCTTCCCTGTCGGCGAGTCTTTGAACAAGGCTACGAGTTTTTTTTTTTTTTTTTTAATGAATTTCATAGACTTACAGTGTTGTTGACTTGGTCTGTTTATTTTCTTCTTTTATTGCCAAAGGCCCAAATTTTATTTTGCTAATGGGTATGTGTTTTTATATCTATGTTAATGTTATGTTCAATCCTTTATCGTTCTAGCTTATGTTCAAAATTGTACTCTTTTAATCTATGCAATGTTATGTATTGGGTTCAAGTTCTATCCTTCACTGTTCTAGCTGATTGTATATTTATGCATGGTTTGTGGGAGTAGACTATCTATCTTATAAAGATTATATGTATGTATTGAAATTTGACTTCAAGTTACATATAAGACCAATCGTTAGATACTATTTATGTATGTTCGATATTCCTCTTGACTCTTGATTAAAATTCCATTTATTGCCATGAAACAGTTTTTCTTATACCCCTACATATATTTTTTTGTTCTTTTTATTCCTATTGTGCCTTGATGGGGTGAAGTGCTGATATTGGGGTGCCCAACTTCTCCATTGGTGAACTCTGGGGGAAGATGAACTTGTTTTCTCTAGAGTATGGTTTACATTGAGTGATCACTACTGCTCAGCCATGCCGCCAAAACGATACAAAATATTGGATAAGACCTTTGATGAAAGTTCTTTCATCTCTGCTCAACGACTAGACCCTAGAGTCGGATTCTACTAGACTAATATTAGGTTTGTTGTACTATATATTGTTTTCGAGTAGCTTTTAGAGCATTGATTGTGTGTCTTTAACACTGCCTGGCGAATTTCTTTGAGAATTGGCAGCATTAAGCTGGAAACAGAGTGCGTCCTATTATAATACAGCTTCATTTAGCTAAATGAATTTATGGCTATGGTCCATTATGTTTTAATGAAAAGCATGTTAACCGGGTTTAGATTTTCTTGCTCTGTAGATACAAACTATTAAATGGGTGACAAGAAGAAGAAGGCTACCATGTTCATCAGACTTGTCTCAGCTGCTGGGACTGGATTTTTCTATGTCAAGAGGAAGCCAACTAAAATAACCGAGAAGCTGGAATTTCGGAAGTACGATCCTCGGGTGAACCGTCATGTTTTGTTTACAGAAGCCAAAATGAAGTGAGATGATATCTTGATTCTGTTCATTCATCTGGATGAATGTTCTTTCAGTTATTTTTGCTTGTTAGTTGCAACTGCAATGTCAACTACTTGTCTGATTGGATAATGTGAGGATGGTTTTATATGGTCTCTTTCTCCCCCTTTTTTCTTGACTCTTTCTTTAGAATTTAGCTCCCTTTTTTTTTCACTCTTGAACTTT

mRNA sequence

CTTTAGGGCATATATGTCATCATATTAATTTTACTATTAATTTCTTGATATCTCTTCCCTTCTGTTCCCAATATCATATCACCTGTTTCGGCGACGGCGGGAAACTTCACTTCGTGTTTTTTCCACGGCGACCGTTCATCGCCCGTTGATCGTTCACCGATTTGAACTGATCTCTCATTATCGCGATTTCTTTACACCATAATTTGATTTCCACCATATTTTCCGGAACATTTACATACTCCTTGCTGCGAAGTTGTGGAAATATTGTGAAAGAAACTATTCATTATGTACATCAACAAATACAAACTATTAAATGGGTGACAAGAAGAAGAAGGCTACCATGTTCATCAGACTTGTCTCAGCTGCTGGGACTGGATTTTTCTATGTCAAGAGGAAGCCAACTAAAATAACCGAGAAGCTGGAATTTCGGAAGTACGATCCTCGGGTGAACCGTCATGTTTTGTTTACAGAAGCCAAAATGAAGTGAGATGATATCTTGATTCTGTTCATTCATCTGGATGAATGTTCTTTCAGTTATTTTTGCTTGTTAGTTGCAACTGCAATGTCAACTACTTGTCTGATTGGATAATGTGAGGATGGTTTTATATGGTCTCTTTCTCCCCCTTTTTTCTTGACTCTTTCTTTAGAATTTAGCTCCCTTTTTTTTTCACTCTTGAACTTT

Coding sequence (CDS)

ATGGGTGACAAGAAGAAGAAGGCTACCATGTTCATCAGACTTGTCTCAGCTGCTGGGACTGGATTTTTCTATGTCAAGAGGAAGCCAACTAAAATAACCGAGAAGCTGGAATTTCGGAAGTACGATCCTCGGGTGAACCGTCATGTTTTGTTTACAGAAGCCAAAATGAAGTGA

Protein sequence

MGDKKKKATMFIRLVSAAGTGFFYVKRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK

Homology

[Close]

BLAST of Sed0022382 vs. NCBI nr
Match: KAG6575038.1 (hypothetical protein SDJN03_25677, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 117.1 bits (292), Expect = 5.0e-23
Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 0


Query: 1  MGDKKKKATMFIRLVSAAGTGFFYVKRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK 58
          MGDKKKKATMFIRLVSAAGTGFFYVKRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK
Sbjct: 35 MGDKKKKATMFIRLVSAAGTGFFYVKRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK 91

[Close]

BLAST of Sed0022382 vs. NCBI nr
Match: XP_004135554.1 (uncharacterized protein LOC101212288 [Cucumis sativus] >XP_008445095.1 PREDICTED: 50S ribosomal protein L33-like [Cucumis melo] >XP_022138424.1 uncharacterized protein LOC111009599 [Momordica charantia] >XP_022958839.1 uncharacterized protein LOC111459991 [Cucurbita moschata] >XP_023006427.1 uncharacterized protein LOC111499157 [Cucurbita maxima] >XP_023548396.1 uncharacterized protein LOC111807061 [Cucurbita pepo subsp. pepo] >XP_038894807.1 50S ribosomal protein L33-like [Benincasa hispida] >KGN65933.1 hypothetical protein Csa_023249 [Cucumis sativus])

HSP 1 Score: 117.1 bits (292), Expect = 5.0e-23
Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 0


Query: 1  MGDKKKKATMFIRLVSAAGTGFFYVKRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK 58
          MGDKKKKATMFIRLVSAAGTGFFYVKRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK
Sbjct: 1  MGDKKKKATMFIRLVSAAGTGFFYVKRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK 57

[Close]

BLAST of Sed0022382 vs. NCBI nr
Match: KAG7013613.1 (rpmG, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 117.1 bits (292), Expect = 5.0e-23
Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 0


Query: 1  MGDKKKKATMFIRLVSAAGTGFFYVKRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK 58
          MGDKKKKATMFIRLVSAAGTGFFYVKRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK
Sbjct: 9  MGDKKKKATMFIRLVSAAGTGFFYVKRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK 65

[Close]

BLAST of Sed0022382 vs. NCBI nr
Match: XP_022137876.1 (uncharacterized protein LOC111009198 [Momordica charantia])

HSP 1 Score: 116.3 bits (290), Expect = 8.6e-23
Identity = 56/57 (98.25%), Postives = 57/57 (100.00%), Query Frame = 0


Query: 1  MGDKKKKATMFIRLVSAAGTGFFYVKRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK 58
          MGDKKKKATMFIRLVSAAGTGFFYVKRKPTK+TEKLEFRKYDPRVNRHVLFTEAKMK
Sbjct: 1  MGDKKKKATMFIRLVSAAGTGFFYVKRKPTKLTEKLEFRKYDPRVNRHVLFTEAKMK 57

[Close]

BLAST of Sed0022382 vs. NCBI nr
Match: XP_007223555.1 (uncharacterized protein LOC18791548 [Prunus persica] >XP_008223087.1 PREDICTED: 50S ribosomal protein L33 [Prunus mume] >XP_021808617.1 uncharacterized protein LOC110752307 [Prunus avium] >XP_034201389.1 50S ribosomal protein L33 [Prunus dulcis] >ONI28500.1 hypothetical protein PRUPE_1G144200 [Prunus persica] >ONI28501.1 hypothetical protein PRUPE_1G144200 [Prunus persica])

HSP 1 Score: 113.6 bits (283), Expect = 5.6e-22
Identity = 54/57 (94.74%), Postives = 57/57 (100.00%), Query Frame = 0


Query: 1  MGDKKKKATMFIRLVSAAGTGFFYVKRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK 58
          MGDKKKKAT+FIRLVSAAGTGFFYVKRKPTK+TEKLEFRK+DPRVNRHVLFTEAKMK
Sbjct: 1  MGDKKKKATVFIRLVSAAGTGFFYVKRKPTKVTEKLEFRKFDPRVNRHVLFTEAKMK 57

[Close]

BLAST of Sed0022382 vs. ExPASy Swiss-Prot
Match: Q2W1A2 (50S ribosomal protein L33 OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) OX=342108 GN=rpmG PE=3 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 3.2e-12
Identity = 36/53 (67.92%), Postives = 42/53 (79.25%), Query Frame = 0


Query: 6  KKATMFIRLVSAAGTGFFYV-KRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK 58
          K AT+ I+L+S AGTGFFYV K+ P K TEKLEFRKYDP V +HV F EAK+K
Sbjct: 3  KPATILIKLLSTAGTGFFYVAKKNPRKTTEKLEFRKYDPVVRKHVQFKEAKIK 55

[Close]

BLAST of Sed0022382 vs. ExPASy Swiss-Prot
Match: B6IN38 (50S ribosomal protein L33 OS=Rhodospirillum centenum (strain ATCC 51521 / SW) OX=414684 GN=rpmG PE=3 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 5.4e-12
Identity = 35/53 (66.04%), Postives = 43/53 (81.13%), Query Frame = 0


Query: 6  KKATMFIRLVSAAGTGFFYVKRK-PTKITEKLEFRKYDPRVNRHVLFTEAKMK 58
          K+ T+ I+LVS+A TGFFYVK+K P K TEKLEF+KYDP   +HV+F EAKMK
Sbjct: 3  KQNTVLIKLVSSADTGFFYVKKKNPRKTTEKLEFKKYDPVARKHVVFKEAKMK 55

[Close]

BLAST of Sed0022382 vs. ExPASy Swiss-Prot
Match: B3CRY6 (50S ribosomal protein L33 OS=Orientia tsutsugamushi (strain Ikeda) OX=334380 GN=rpmG PE=3 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 6.0e-11
Identity = 33/54 (61.11%), Postives = 42/54 (77.78%), Query Frame = 0


Query: 5  KKKATMFIRLVSAAGTGFFYVK-RKPTKITEKLEFRKYDPRVNRHVLFTEAKMK 58
          +KK  + ++LVS+AGTG F+VK R P   TEKL FRKYDP+V +HV FTEAK+K
Sbjct: 3  RKKKKVLVKLVSSAGTGVFWVKQRNPKTQTEKLSFRKYDPKVRKHVQFTEAKIK 56

[Close]

BLAST of Sed0022382 vs. ExPASy Swiss-Prot
Match: A8GY80 (50S ribosomal protein L33 OS=Rickettsia bellii (strain OSU 85-389) OX=391896 GN=rpmG PE=3 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 6.0e-11
Identity = 34/54 (62.96%), Postives = 39/54 (72.22%), Query Frame = 0


Query: 5  KKKATMFIRLVSAAGTGFFYV-KRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK 58
          KK   + +RLVS AGTGFF V KR P   TEKL FRKYDP+V +HVLF E K+K
Sbjct: 3  KKNKNILVRLVSTAGTGFFLVKKRNPKTQTEKLSFRKYDPKVRKHVLFKEEKIK 56

[Close]

BLAST of Sed0022382 vs. ExPASy Swiss-Prot
Match: Q1RGQ4 (50S ribosomal protein L33 OS=Rickettsia bellii (strain RML369-C) OX=336407 GN=rpmG PE=3 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 6.0e-11
Identity = 34/54 (62.96%), Postives = 39/54 (72.22%), Query Frame = 0


Query: 5  KKKATMFIRLVSAAGTGFFYV-KRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK 58
          KK   + +RLVS AGTGFF V KR P   TEKL FRKYDP+V +HVLF E K+K
Sbjct: 3  KKNKNILVRLVSTAGTGFFLVKKRNPKTQTEKLSFRKYDPKVRKHVLFKEEKIK 56

[Close]

BLAST of Sed0022382 vs. ExPASy TrEMBL
Match: A0A6J1KVU2 (uncharacterized protein LOC111499157 OS=Cucurbita maxima OX=3661 GN=LOC111499157 PE=3 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 2.4e-23
Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 0


Query: 1  MGDKKKKATMFIRLVSAAGTGFFYVKRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK 58
          MGDKKKKATMFIRLVSAAGTGFFYVKRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK
Sbjct: 1  MGDKKKKATMFIRLVSAAGTGFFYVKRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK 57

[Close]

BLAST of Sed0022382 vs. ExPASy TrEMBL
Match: A0A0A0LVW9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G538800 PE=3 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 2.4e-23
Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 0


Query: 1  MGDKKKKATMFIRLVSAAGTGFFYVKRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK 58
          MGDKKKKATMFIRLVSAAGTGFFYVKRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK
Sbjct: 1  MGDKKKKATMFIRLVSAAGTGFFYVKRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK 57

[Close]

BLAST of Sed0022382 vs. ExPASy TrEMBL
Match: A0A6J1CA39 (uncharacterized protein LOC111009599 OS=Momordica charantia OX=3673 GN=LOC111009599 PE=3 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 2.4e-23
Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 0


Query: 1  MGDKKKKATMFIRLVSAAGTGFFYVKRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK 58
          MGDKKKKATMFIRLVSAAGTGFFYVKRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK
Sbjct: 1  MGDKKKKATMFIRLVSAAGTGFFYVKRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK 57

[Close]

BLAST of Sed0022382 vs. ExPASy TrEMBL
Match: A0A6J1H6A1 (uncharacterized protein LOC111459991 OS=Cucurbita moschata OX=3662 GN=LOC111459991 PE=3 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 2.4e-23
Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 0


Query: 1  MGDKKKKATMFIRLVSAAGTGFFYVKRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK 58
          MGDKKKKATMFIRLVSAAGTGFFYVKRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK
Sbjct: 1  MGDKKKKATMFIRLVSAAGTGFFYVKRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK 57

[Close]

BLAST of Sed0022382 vs. ExPASy TrEMBL
Match: A0A1S3BBV4 (50S ribosomal protein L33-like OS=Cucumis melo OX=3656 GN=LOC103488236 PE=3 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 2.4e-23
Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 0


Query: 1  MGDKKKKATMFIRLVSAAGTGFFYVKRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK 58
          MGDKKKKATMFIRLVSAAGTGFFYVKRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK
Sbjct: 1  MGDKKKKATMFIRLVSAAGTGFFYVKRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK 57

[Close]

BLAST of Sed0022382 vs. TAIR 10
Match: AT3G06320.1 (Ribosomal protein L33 family protein )

HSP 1 Score: 99.0 bits (245), Expect = 1.3e-21
Identity = 50/58 (86.21%), Postives = 52/58 (89.66%), Query Frame = 0


Query: 1  MGDKKKKATMFIRLVSAAGTGFFYVKRKPTK-ITEKLEFRKYDPRVNRHVLFTEAKMK 58
          MGDK+KK  MFIRLVSAAGTGFFYVKRK TK + EKLEFRKYDPRVNRHVLFTE KMK
Sbjct: 1  MGDKRKKTFMFIRLVSAAGTGFFYVKRKSTKGLLEKLEFRKYDPRVNRHVLFTEQKMK 58

[Close]

BLAST of Sed0022382 vs. TAIR 10
Match: AT5G18790.1 (Ribosomal protein L33 family protein )

HSP 1 Score: 99.0 bits (245), Expect = 1.3e-21
Identity = 50/58 (86.21%), Postives = 52/58 (89.66%), Query Frame = 0


Query: 1  MGDKKKKATMFIRLVSAAGTGFFYVKRKPTK-ITEKLEFRKYDPRVNRHVLFTEAKMK 58
          MGDK+KK  MFIRLVSAAGTGFFYVKRK TK + EKLEFRKYDPRVNRHVLFTE KMK
Sbjct: 1  MGDKRKKTFMFIRLVSAAGTGFFYVKRKSTKGLLEKLEFRKYDPRVNRHVLFTEQKMK 58

The following BLAST results are available for this feature:

BLAST of Sed0022382 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6575038.1	5.0e-23	100.00	hypothetical protein SDJN03_25677, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_004135554.1	5.0e-23	100.00	uncharacterized protein LOC101212288 [Cucumis sativus] >XP_008445095.1 PREDICTED...	[more]
KAG7013613.1	5.0e-23	100.00	rpmG, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022137876.1	8.6e-23	98.25	uncharacterized protein LOC111009198 [Momordica charantia]	[more]
XP_007223555.1	5.6e-22	94.74	uncharacterized protein LOC18791548 [Prunus persica] >XP_008223087.1 PREDICTED: ...	[more]

BLAST of Sed0022382 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2W1A2	3.2e-12	67.92	50S ribosomal protein L33 OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 70...	[more]
B6IN38	5.4e-12	66.04	50S ribosomal protein L33 OS=Rhodospirillum centenum (strain ATCC 51521 / SW) OX...	[more]
B3CRY6	6.0e-11	61.11	50S ribosomal protein L33 OS=Orientia tsutsugamushi (strain Ikeda) OX=334380 GN=...	[more]
A8GY80	6.0e-11	62.96	50S ribosomal protein L33 OS=Rickettsia bellii (strain OSU 85-389) OX=391896 GN=...	[more]
Q1RGQ4	6.0e-11	62.96	50S ribosomal protein L33 OS=Rickettsia bellii (strain RML369-C) OX=336407 GN=rp...	[more]

BLAST of Sed0022382 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KVU2	2.4e-23	100.00	uncharacterized protein LOC111499157 OS=Cucurbita maxima OX=3661 GN=LOC111499157...	[more]
A0A0A0LVW9	2.4e-23	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G538800 PE=3 SV=1	[more]
A0A6J1CA39	2.4e-23	100.00	uncharacterized protein LOC111009599 OS=Momordica charantia OX=3673 GN=LOC111009...	[more]
A0A6J1H6A1	2.4e-23	100.00	uncharacterized protein LOC111459991 OS=Cucurbita moschata OX=3662 GN=LOC1114599...	[more]
A0A1S3BBV4	2.4e-23	100.00	50S ribosomal protein L33-like OS=Cucumis melo OX=3656 GN=LOC103488236 PE=3 SV=1	[more]

BLAST of Sed0022382 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G06320.1	1.3e-21	86.21	Ribosomal protein L33 family protein	[more]
AT5G18790.1	1.3e-21	86.21	Ribosomal protein L33 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038584	Ribosomal protein L33 superfamily	GENE3D	2.20.28.120	Ribosomal protein L33	coord: 3..57 e-value: 3.7E-24 score: 86.3
IPR001705	Ribosomal protein L33	TIGRFAM	TIGR01023	TIGR01023	coord: 4..57 e-value: 7.8E-18 score: 62.6
IPR001705	Ribosomal protein L33	PFAM	PF00471	Ribosomal_L33	coord: 12..55 e-value: 8.8E-11 score: 42.1
None	No IPR available	PANTHER	PTHR15238:SF1	54S RIBOSOMAL PROTEIN L39, MITOCHONDRIAL	coord: 1..57
None	No IPR available	PANTHER	PTHR15238	54S RIBOSOMAL PROTEIN L39, MITOCHONDRIAL	coord: 1..57
IPR011332	Zinc-binding ribosomal protein	SUPERFAMILY	57829	Zn-binding ribosomal proteins	coord: 4..55

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0022382.2	Sed0022382.2	mRNA
Sed0022382.4	Sed0022382.4	mRNA
Sed0022382.1	Sed0022382.1	mRNA
Sed0022382.3	Sed0022382.3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
biological_process	GO:0006412	translation
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0015934	large ribosomal subunit
cellular_component	GO:0009536	plastid
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity
molecular_function	GO:0003735	structural constituent of ribosome