Sed0022381 (gene) Chayote v1

Overview


Name	Sed0022381
Type	gene
Organism	Sechium edule (Chayote v1)
Description	DNA-(apurinic or apyrimidinic site) lyase
Location	LG01: 42323008 .. 42325037 (+)
RNA-Seq Expression	Sed0022381
Synteny	Sed0022381

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAATATTATATCAGAATCCCAGTCTCCAAGCCCCCAGATGCACACATTCTCATCCACGCCCTTTCTTCAAATGTCGAAGCGGCTCAGAACAACTCCACCTTCCACTCCCTCCGCCAAGCCACCGCCGCCACCTCCAACTCCACAACTCTCCCGTTCCAAGGGCACCGCCGTCTCCCTCCGCCAACCCAAAAGAGGCCTAACCCTAACCCTCTCCAACTGGGTCCCTCTCAATCTCTCCAGATCCGACCTCTCTTTGCCCCTCACTTTCCCCACCGGCCAAACATTCCGGTGGAAACAAACCGCCGCTCTTCAGTTCACCGGCGTCGTCGGCCCCCACCTCATCTCTCTCAACCAACTCCCCAAGGCCCACGTTTCCTATTGCCTTCACTCTTCTTCTTCTTCTTCTGCCTCCGCCGCCGCCAGATCGGCGTTGCTTGATTTCCTTAACGCCGGCATCTCCCTCCGTGCCCTTTGGGAGGTTTTCTCCGCCGCTGATCCGACATTCCATGCCTTGGCTCGCCTTTTGGAGGGTGCCCGGGTTCTCAGGCAACACCCACTTGAGTGCTTGGTTCAGTTTTTGTGTTCTTCCAATAATAATATTGCCAGAATTACCAAAATGGTGGATTATATTTCTTCTCTCGGGAATTATTTGGGCAATGTTGGAGGTTTTGATTTCCATGAATTTCCCACTCTGGAGAGGTTGTCTTTGGTTTCTGAGGCTGAGCTTAGAGAGGCGGGCTTTGGTTACAGGTTCGTTTCTCTATTGTCTACCTACCACTCAATTTCTAATACACATTTGTTTGTATATTTATCTTGATTTATAGAATCTAAAACAAGGTCTATGTGATCGGAAAGTACTTAGAGGGACTATGTTCAATTCATGTTGACTTTCCACTTGTAAGGAAAATTATGGGTTTATGTCCACTTTGGCCAAAAGTGGAAACTGTGGGTGCTTCATTGTCTCAACATTGTCAATTAATACTTCAATGGATAGGTTTTTAAGACTCACAAGACATATTTAATCTTGATATGTATTACCAAACCAATATTTATTTTCTCAACAATTTCAATATGGGTGGTTTTATTGATAGCTTAATGTTAATGAGCAGGGCTAAATATATAATTGGCACTATAAATGCTTTAGAAGCCAAACCTGGAGGAGGTGCAGAGTGGCTTTTGTCTCTTCGTGATTTGGATCTTGAAGAGGTGATTGATGCTCTTTCTACTTTGCCGGGCGTTGGTCCCAAGGTAGCGGCTTGTGTTGCTCTCTTTTCCCTCGATCAGCACCATGCCATTCCTGTTGACACACATGTTTGGCAGGTATGAATGATTGAGGTATCATTCTTATGATCCAAATGAGCTTTGCCATATAAGTATTTGAGTCAATCTTCATTTGAGTCTTATTAGAAAGAAGAATAAGGGTCATATACTTAAAATGAAGTTGACTGAACGGCTTCTTCTTGTGTGGGATGGAAAGATTGCTACCAGGTACCTTGTCCCTGAGCTTGCTGGTGCACGTCTAACACCAAAGCTTTGCAACCGTGTGGCCGAGGCATTTGTCAGCAAGTATGGAAAATATGCTGGTTGGGCTCAAACTCTGCTTTTCGTTGCTGATTTACCTCAACAGAAGGCCCTCTTACAATCAAGTGTTGACAATGCTAAAAGGAAAAAATCTACAAAGCGACGAAAAGAAAAGGAACAGGCTGGTAATATGAATCAATGTGAATTGCTATGTTAAGTTGGTTTTAAAATTTTATGTTTAGTTTCCAATATTCCAATTGGCATGGAATTGCCCTTGCTTCGAAAATTTTTTGGGTATGTCACGGCACCTTGATGTTGTTATCTCCCGGAAGAGAGGAATTCAGAATTTAATACTCACCTTGATGTTGTAGGTATACACTGTTAAGCAACTGCTCTTTATTTTTATGCCGCTAGCACTAAGCAGCTACTCTTGTTGACTTGTACTAATTGTGATATGATGTGACTTCTTTGAAACATTTCCAATTGTAATAATATTGTAATTCACTAGC

mRNA sequence

CAATATTATATCAGAATCCCAGTCTCCAAGCCCCCAGATGCACACATTCTCATCCACGCCCTTTCTTCAAATGTCGAAGCGGCTCAGAACAACTCCACCTTCCACTCCCTCCGCCAAGCCACCGCCGCCACCTCCAACTCCACAACTCTCCCGTTCCAAGGGCACCGCCGTCTCCCTCCGCCAACCCAAAAGAGGCCTAACCCTAACCCTCTCCAACTGGGTCCCTCTCAATCTCTCCAGATCCGACCTCTCTTTGCCCCTCACTTTCCCCACCGGCCAAACATTCCGGTGGAAACAAACCGCCGCTCTTCAGTTCACCGGCGTCGTCGGCCCCCACCTCATCTCTCTCAACCAACTCCCCAAGGCCCACGTTTCCTATTGCCTTCACTCTTCTTCTTCTTCTTCTGCCTCCGCCGCCGCCAGATCGGCGTTGCTTGATTTCCTTAACGCCGGCATCTCCCTCCGTGCCCTTTGGGAGGTTTTCTCCGCCGCTGATCCGACATTCCATGCCTTGGCTCGCCTTTTGGAGGGTGCCCGGGTTCTCAGGCAACACCCACTTGAGTGCTTGGTTCAGTTTTTGTGTTCTTCCAATAATAATATTGCCAGAATTACCAAAATGGTGGATTATATTTCTTCTCTCGGGAATTATTTGGGCAATGTTGGAGGTTTTGATTTCCATGAATTTCCCACTCTGGAGAGGTTGTCTTTGGTTTCTGAGGCTGAGCTTAGAGAGGCGGGCTTTGGTTACAGGGCTAAATATATAATTGGCACTATAAATGCTTTAGAAGCCAAACCTGGAGGAGGTGCAGAGTGGCTTTTGTCTCTTCGTGATTTGGATCTTGAAGAGGTGATTGATGCTCTTTCTACTTTGCCGGGCGTTGGTCCCAAGGTAGCGGCTTGTGTTGCTCTCTTTTCCCTCGATCAGCACCATGCCATTCCTGTTGACACACATGTTTGGCAGATTGCTACCAGGTACCTTGTCCCTGAGCTTGCTGGTGCACGTCTAACACCAAAGCTTTGCAACCGTGTGGCCGAGGCATTTGTCAGCAAGTATGGAAAATATGCTGGTTGGGCTCAAACTCTGCTTTTCGTTGCTGATTTACCTCAACAGAAGGCCCTCTTACAATCAAGTGTTGACAATGCTAAAAGGAAAAAATCTACAAAGCGACGAAAAGAAAAGGAACAGGCTGGTAATATGAATCAATGTGAATTGCTATGTTAAGTTGGTTTTAAAATTTTATGTTTAGTTTCCAATATTCCAATTGGCATGGAATTGCCCTTGCTTCGAAAATTTTTTGGGTATGTCACGGCACCTTGATGTTGTTATCTCCCGGAAGAGAGGAATTCAGAATTTAATACTCACCTTGATGTTGTAGGTATACACTGTTAAGCAACTGCTCTTTATTTTTATGCCGCTAGCACTAAGCAGCTACTCTTGTTGACTTGTACTAATTGTGATATGATGTGACTTCTTTGAAACATTTCCAATTGTAATAATATTGTAATTCACTAGC

Coding sequence (CDS)

ATGCACACATTCTCATCCACGCCCTTTCTTCAAATGTCGAAGCGGCTCAGAACAACTCCACCTTCCACTCCCTCCGCCAAGCCACCGCCGCCACCTCCAACTCCACAACTCTCCCGTTCCAAGGGCACCGCCGTCTCCCTCCGCCAACCCAAAAGAGGCCTAACCCTAACCCTCTCCAACTGGGTCCCTCTCAATCTCTCCAGATCCGACCTCTCTTTGCCCCTCACTTTCCCCACCGGCCAAACATTCCGGTGGAAACAAACCGCCGCTCTTCAGTTCACCGGCGTCGTCGGCCCCCACCTCATCTCTCTCAACCAACTCCCCAAGGCCCACGTTTCCTATTGCCTTCACTCTTCTTCTTCTTCTTCTGCCTCCGCCGCCGCCAGATCGGCGTTGCTTGATTTCCTTAACGCCGGCATCTCCCTCCGTGCCCTTTGGGAGGTTTTCTCCGCCGCTGATCCGACATTCCATGCCTTGGCTCGCCTTTTGGAGGGTGCCCGGGTTCTCAGGCAACACCCACTTGAGTGCTTGGTTCAGTTTTTGTGTTCTTCCAATAATAATATTGCCAGAATTACCAAAATGGTGGATTATATTTCTTCTCTCGGGAATTATTTGGGCAATGTTGGAGGTTTTGATTTCCATGAATTTCCCACTCTGGAGAGGTTGTCTTTGGTTTCTGAGGCTGAGCTTAGAGAGGCGGGCTTTGGTTACAGGGCTAAATATATAATTGGCACTATAAATGCTTTAGAAGCCAAACCTGGAGGAGGTGCAGAGTGGCTTTTGTCTCTTCGTGATTTGGATCTTGAAGAGGTGATTGATGCTCTTTCTACTTTGCCGGGCGTTGGTCCCAAGGTAGCGGCTTGTGTTGCTCTCTTTTCCCTCGATCAGCACCATGCCATTCCTGTTGACACACATGTTTGGCAGATTGCTACCAGGTACCTTGTCCCTGAGCTTGCTGGTGCACGTCTAACACCAAAGCTTTGCAACCGTGTGGCCGAGGCATTTGTCAGCAAGTATGGAAAATATGCTGGTTGGGCTCAAACTCTGCTTTTCGTTGCTGATTTACCTCAACAGAAGGCCCTCTTACAATCAAGTGTTGACAATGCTAAAAGGAAAAAATCTACAAAGCGACGAAAAGAAAAGGAACAGGCTGGTAATATGAATCAATGTGAATTGCTATGTTAA

Protein sequence

MHTFSSTPFLQMSKRLRTTPPSTPSAKPPPPPPTPQLSRSKGTAVSLRQPKRGLTLTLSNWVPLNLSRSDLSLPLTFPTGQTFRWKQTAALQFTGVVGPHLISLNQLPKAHVSYCLHSSSSSSASAAARSALLDFLNAGISLRALWEVFSAADPTFHALARLLEGARVLRQHPLECLVQFLCSSNNNIARITKMVDYISSLGNYLGNVGGFDFHEFPTLERLSLVSEAELREAGFGYRAKYIIGTINALEAKPGGGAEWLLSLRDLDLEEVIDALSTLPGVGPKVAACVALFSLDQHHAIPVDTHVWQIATRYLVPELAGARLTPKLCNRVAEAFVSKYGKYAGWAQTLLFVADLPQQKALLQSSVDNAKRKKSTKRRKEKEQAGNMNQCELLC

Homology

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BLAST of Sed0022381 vs. NCBI nr
Match: XP_008466739.1 (PREDICTED: N-glycosylase/DNA lyase OGG1 isoform X1 [Cucumis melo])

HSP 1 Score: 610.9 bits (1574), Expect = 7.7e-171
Identity = 321/406 (79.06%), Postives = 351/406 (86.45%), Query Frame = 0


Query: 1   MHTFSSTPFLQMSKRLRTTPPSTPSAK---PPPPPPTPQLSRSKGTAVSL----RQPKRG 60
           M + S  P L M+KR + T PSTPS K   PPP PPTPQLS SK T VS+    + P + 
Sbjct: 1   MPSLSFKPLLLMTKRFKPTTPSTPSTKPSPPPPSPPTPQLSHSKPTTVSIHHSSKNPNKT 60

Query: 61  LTL-------TLSNWVPLNLSRSDLSLPLTFPTGQTFRWKQTAALQFTGVVGPHLISLNQ 120
           LTL       + SNWV LNL+RSDLSLPLTFPTGQTFRWKQT  L+FTGVVG HLISLN 
Sbjct: 61  LTLLKSPQSPSSSNWVSLNLTRSDLSLPLTFPTGQTFRWKQTNPLEFTGVVGSHLISLNH 120

Query: 121 LPKAHVSYCLH-SSSSSSASAAARSALLDFLNAGISLRALWEVFSAADPTFHALARLLEG 180
           LP   VSYCLH SS+S+S+SAAAR ALLDFLNAGISL ++WEVFSAADP F ALAR LEG
Sbjct: 121 LPNGEVSYCLHFSSTSTSSSAAARLALLDFLNAGISLSSIWEVFSAADPRFDALARHLEG 180

Query: 181 ARVLRQHPLECLVQFLCSSNNNIARITKMVDYISSLGNYLGNVGGFDFHEFPTLERLSLV 240
           ARVLRQ PLECL+QFLCSSNNNI RITKMVDYISSLGNYLGNVGGFDFHEFP+LERLSLV
Sbjct: 181 ARVLRQDPLECLIQFLCSSNNNIGRITKMVDYISSLGNYLGNVGGFDFHEFPSLERLSLV 240

Query: 241 SEAELREAGFGYRAKYIIGTINALEAKPGGGAEWLLSLRDLDLEEVIDALSTLPGVGPKV 300
           SEAELREAGFGYRAKYIIGT+NAL+AKPGGGAEWLLSLRD DLEEVI ALSTLPGVGPKV
Sbjct: 241 SEAELREAGFGYRAKYIIGTVNALKAKPGGGAEWLLSLRDSDLEEVIGALSTLPGVGPKV 300

Query: 301 AACVALFSLDQHHAIPVDTHVWQIATRYLVPELAGARLTPKLCNRVAEAFVSKYGKYAGW 360
           AACVALFSLDQHHAIPVDTHVWQIATRYLVPELAGARLTPKLCNRVAEAFVSKYGKYAGW
Sbjct: 301 AACVALFSLDQHHAIPVDTHVWQIATRYLVPELAGARLTPKLCNRVAEAFVSKYGKYAGW 360

Query: 361 AQTLLFVADLPQQKALLQSSVDNAKRKKSTKRRKEKEQAGNMNQCE 392
           AQTLLFVA+LPQQKALL ++++N KRK+STK++++   AGN++QCE
Sbjct: 361 AQTLLFVAELPQQKALLPATLENTKRKRSTKQQRDMAHAGNIDQCE 406

[Close]

BLAST of Sed0022381 vs. NCBI nr
Match: XP_038885236.1 (N-glycosylase/DNA lyase OGG1 isoform X2 [Benincasa hispida])

HSP 1 Score: 608.6 bits (1568), Expect = 3.8e-170
Identity = 316/399 (79.20%), Postives = 348/399 (87.22%), Query Frame = 0


Query: 3   TFSSTPFLQMSKRLRTTPPSTPSAKP-----PPPPPTPQLSRSKGTAVSLRQPKRGLTLT 62
           +F+  P L M+KRLR TPPSTPSAKP     PP PPTPQLS SK T VS+    +    T
Sbjct: 5   SFNFKPLL-MTKRLRPTPPSTPSAKPPPLPSPPSPPTPQLSHSKPTTVSVHYSSKNRNKT 64

Query: 63  LS-------NWVPLNLSRSDLSLPLTFPTGQTFRWKQTAALQFTGVVGPHLISLNQLPKA 122
           L+       NWV LNL++S+L+LPLTFPTGQTFRWKQT+ LQFTGVVG HLISLN LP +
Sbjct: 65  LTPQSSSSFNWVSLNLTKSELALPLTFPTGQTFRWKQTSPLQFTGVVGSHLISLNHLPNS 124

Query: 123 HVSYCLHSSSSSSASAAARSALLDFLNAGISLRALWEVFSAADPTFHALARLLEGARVLR 182
            VSYCLHS S+SS+SAAAR ALLDFLNAGISL ++WEVF AADP F  LAR LEGARVLR
Sbjct: 125 DVSYCLHSCSTSSSSAAARLALLDFLNAGISLSSIWEVFLAADPRFDVLARHLEGARVLR 184

Query: 183 QHPLECLVQFLCSSNNNIARITKMVDYISSLGNYLGNVGGFDFHEFPTLERLSLVSEAEL 242
           Q PLECL+QFLCSSNNNI RITKMVDYISSLGNYLGN+GGFDF+EFP+LERLSLVSEAEL
Sbjct: 185 QDPLECLIQFLCSSNNNIGRITKMVDYISSLGNYLGNIGGFDFYEFPSLERLSLVSEAEL 244

Query: 243 REAGFGYRAKYIIGTINALEAKPGGGAEWLLSLRDLDLEEVIDALSTLPGVGPKVAACVA 302
           REAGFGYRAKYIIG +NAL+AKPGGGAEWLLSLRDLDLEEVI+ALSTLPGVGPKVAACVA
Sbjct: 245 REAGFGYRAKYIIGAVNALKAKPGGGAEWLLSLRDLDLEEVIEALSTLPGVGPKVAACVA 304

Query: 303 LFSLDQHHAIPVDTHVWQIATRYLVPELAGARLTPKLCNRVAEAFVSKYGKYAGWAQTLL 362
           LFSLDQHHAIPVDTHVWQIATRYLVPELAGARLTPKLCNRVAEAFVSKYGKYAGWAQTLL
Sbjct: 305 LFSLDQHHAIPVDTHVWQIATRYLVPELAGARLTPKLCNRVAEAFVSKYGKYAGWAQTLL 364

Query: 363 FVADLPQQKALLQSSVDNAKRKKSTKRRKEKEQAGNMNQ 390
           FVADLPQQKALL ++++NAKRK+STK +K+K   GN++Q
Sbjct: 365 FVADLPQQKALLPANLENAKRKRSTKHQKDKAHTGNVDQ 402

[Close]

BLAST of Sed0022381 vs. NCBI nr
Match: XP_004149809.2 (N-glycosylase/DNA lyase OGG1 [Cucumis sativus] >KGN47701.1 hypothetical protein Csa_018253 [Cucumis sativus])

HSP 1 Score: 601.7 bits (1550), Expect = 4.6e-168
Identity = 316/405 (78.02%), Postives = 343/405 (84.69%), Query Frame = 0


Query: 1   MHTFSSTPFLQMSKRLRTTPPSTPSAK---PPPPPPTPQLSRSKGTAVSLRQPKRGLTLT 60
           M + S  P L M+KRL+ TPPSTPS K   PPP PPTPQLS SK T VSL    +    T
Sbjct: 1   MPSLSFKPLLLMTKRLKPTPPSTPSTKPSPPPPSPPTPQLSHSKPTTVSLHHSSKNPNKT 60

Query: 61  L-----------SNWVPLNLSRSDLSLPLTFPTGQTFRWKQTAALQFTGVVGPHLISLNQ 120
           L           SNWV LNL+RSDLSLPLTFPTGQTFRWKQT   +FTGVVG HLISLN 
Sbjct: 61  LPLLKSPQSPSSSNWVSLNLTRSDLSLPLTFPTGQTFRWKQTNPFEFTGVVGSHLISLNH 120

Query: 121 LPKAHVSYCLHSSSSSSASAAARSALLDFLNAGISLRALWEVFSAADPTFHALARLLEGA 180
           LP   VSYCLH SS+SS SAAAR ALLDFLNA ISL ++WEVFSAADP F ALAR  EGA
Sbjct: 121 LPNGDVSYCLHFSSTSS-SAAARLALLDFLNASISLSSIWEVFSAADPRFDALARHFEGA 180

Query: 181 RVLRQHPLECLVQFLCSSNNNIARITKMVDYISSLGNYLGNVGGFDFHEFPTLERLSLVS 240
           RVLRQ PLECL+QFLCSSNNNI RITKMVDYISSLGNYLGNVGGFDF+EFP+LERLSLVS
Sbjct: 181 RVLRQDPLECLIQFLCSSNNNIGRITKMVDYISSLGNYLGNVGGFDFYEFPSLERLSLVS 240

Query: 241 EAELREAGFGYRAKYIIGTINALEAKPGGGAEWLLSLRDLDLEEVIDALSTLPGVGPKVA 300
           EAELREAGFGYRAKYIIG +NAL+AKP GGAEWLLSLRD DLEEVI+ALSTLPGVGPKVA
Sbjct: 241 EAELREAGFGYRAKYIIGAVNALKAKPVGGAEWLLSLRDSDLEEVIEALSTLPGVGPKVA 300

Query: 301 ACVALFSLDQHHAIPVDTHVWQIATRYLVPELAGARLTPKLCNRVAEAFVSKYGKYAGWA 360
           ACVALFSLDQHHAIPVDTHVWQIATRYLVPELAGARLTPKLCNRVAEAFVSKYGKYAGWA
Sbjct: 301 ACVALFSLDQHHAIPVDTHVWQIATRYLVPELAGARLTPKLCNRVAEAFVSKYGKYAGWA 360

Query: 361 QTLLFVADLPQQKALLQSSVDNAKRKKSTKRRKEKEQAGNMNQCE 392
           QTLLF+A+LPQQKALL ++++N KRK+STK++K+   AGN++QCE
Sbjct: 361 QTLLFIAELPQQKALLPANLENTKRKRSTKQQKDMAHAGNIDQCE 404

[Close]

BLAST of Sed0022381 vs. NCBI nr
Match: XP_038885235.1 (N-glycosylase/DNA lyase OGG1 isoform X1 [Benincasa hispida])

HSP 1 Score: 599.7 bits (1545), Expect = 1.8e-167
Identity = 316/411 (76.89%), Postives = 348/411 (84.67%), Query Frame = 0


Query: 3   TFSSTPFLQMSKRLRTTPPSTPSAKP-----PPPPPTPQLSRSKGTAVSLRQPKRGLTLT 62
           +F+  P L M+KRLR TPPSTPSAKP     PP PPTPQLS SK T VS+    +    T
Sbjct: 5   SFNFKPLL-MTKRLRPTPPSTPSAKPPPLPSPPSPPTPQLSHSKPTTVSVHYSSKNRNKT 64

Query: 63  LS-------NWVPLNLSRSDLSLPLTFPTGQTFRWKQTAALQFTGVVGPHLISLNQLPKA 122
           L+       NWV LNL++S+L+LPLTFPTGQTFRWKQT+ LQFTGVVG HLISLN LP +
Sbjct: 65  LTPQSSSSFNWVSLNLTKSELALPLTFPTGQTFRWKQTSPLQFTGVVGSHLISLNHLPNS 124

Query: 123 HVSYCLHSSSSSSASAAARSALLDFLNAGISLRALWEVFSAADPTFHALARLLEGARVLR 182
            VSYCLHS S+SS+SAAAR ALLDFLNAGISL ++WEVF AADP F  LAR LEGARVLR
Sbjct: 125 DVSYCLHSCSTSSSSAAARLALLDFLNAGISLSSIWEVFLAADPRFDVLARHLEGARVLR 184

Query: 183 QHPLECLVQFLCSSNNNIARITKMVDYISSLGNYLGNVGGFDFHEFPTLERLSLVSEAEL 242
           Q PLECL+QFLCSSNNNI RITKMVDYISSLGNYLGN+GGFDF+EFP+LERLSLVSEAEL
Sbjct: 185 QDPLECLIQFLCSSNNNIGRITKMVDYISSLGNYLGNIGGFDFYEFPSLERLSLVSEAEL 244

Query: 243 REAGFGYRAKYIIGTINALEAKPGGGAEWLLSLRDLDLEEVIDALSTLPGVGPKVAACVA 302
           REAGFGYRAKYIIG +NAL+AKPGGGAEWLLSLRDLDLEEVI+ALSTLPGVGPKVAACVA
Sbjct: 245 REAGFGYRAKYIIGAVNALKAKPGGGAEWLLSLRDLDLEEVIEALSTLPGVGPKVAACVA 304

Query: 303 LFSLDQHHAIPVDTHVWQ------------IATRYLVPELAGARLTPKLCNRVAEAFVSK 362
           LFSLDQHHAIPVDTHVWQ            IATRYLVPELAGARLTPKLCNRVAEAFVSK
Sbjct: 305 LFSLDQHHAIPVDTHVWQLIEKFLLAWDEKIATRYLVPELAGARLTPKLCNRVAEAFVSK 364

Query: 363 YGKYAGWAQTLLFVADLPQQKALLQSSVDNAKRKKSTKRRKEKEQAGNMNQ 390
           YGKYAGWAQTLLFVADLPQQKALL ++++NAKRK+STK +K+K   GN++Q
Sbjct: 365 YGKYAGWAQTLLFVADLPQQKALLPANLENAKRKRSTKHQKDKAHTGNVDQ 414

[Close]

BLAST of Sed0022381 vs. NCBI nr
Match: XP_016903621.1 (PREDICTED: N-glycosylase/DNA lyase OGG1 isoform X2 [Cucumis melo] >TYK08955.1 N-glycosylase/DNA lyase OGG1 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 599.0 bits (1543), Expect = 3.0e-167
Identity = 316/399 (79.20%), Postives = 344/399 (86.22%), Query Frame = 0


Query: 1   MHTFSSTPFLQMSKRLRTTPPSTPSAK---PPPPPPTPQLSRSKGTAVSL----RQPKRG 60
           M + S  P L M+KR + T PSTPS K   PPP PPTPQLS SK T VS+    + P + 
Sbjct: 1   MPSLSFKPLLLMTKRFKPTTPSTPSTKPSPPPPSPPTPQLSHSKPTTVSIHHSSKNPNKT 60

Query: 61  LTL-------TLSNWVPLNLSRSDLSLPLTFPTGQTFRWKQTAALQFTGVVGPHLISLNQ 120
           LTL       + SNWV LNL+RSDLSLPLTFPTGQTFRWKQT  L+FTGVVG HLISLN 
Sbjct: 61  LTLLKSPQSPSSSNWVSLNLTRSDLSLPLTFPTGQTFRWKQTNPLEFTGVVGSHLISLNH 120

Query: 121 LPKAHVSYCLH-SSSSSSASAAARSALLDFLNAGISLRALWEVFSAADPTFHALARLLEG 180
           LP   VSYCLH SS+S+S+SAAAR ALLDFLNAGISL ++WEVFSAADP F ALAR LEG
Sbjct: 121 LPNGEVSYCLHFSSTSTSSSAAARLALLDFLNAGISLSSIWEVFSAADPRFDALARHLEG 180

Query: 181 ARVLRQHPLECLVQFLCSSNNNIARITKMVDYISSLGNYLGNVGGFDFHEFPTLERLSLV 240
           ARVLRQ PLECL+QFLCSSNNNI RITKMVDYISSLGNYLGNVGGFDFHEFP+LERLSLV
Sbjct: 181 ARVLRQDPLECLIQFLCSSNNNIGRITKMVDYISSLGNYLGNVGGFDFHEFPSLERLSLV 240

Query: 241 SEAELREAGFGYRAKYIIGTINALEAKPGGGAEWLLSLRDLDLEEVIDALSTLPGVGPKV 300
           SEAELREAGFGYRAKYIIGT+NAL+AKPGGGAEWLLSLRD DLEEVI ALSTLPGVGPKV
Sbjct: 241 SEAELREAGFGYRAKYIIGTVNALKAKPGGGAEWLLSLRDSDLEEVIGALSTLPGVGPKV 300

Query: 301 AACVALFSLDQHHAIPVDTHVWQIATRYLVPELAGARLTPKLCNRVAEAFVSKYGKYAGW 360
           AACVALFSLDQHHAIPVDTHVWQIATRYLVPELAGARLTPKLCNRVAEAFVSKYGKYAGW
Sbjct: 301 AACVALFSLDQHHAIPVDTHVWQIATRYLVPELAGARLTPKLCNRVAEAFVSKYGKYAGW 360

Query: 361 AQTLLFVADLPQQKALLQSSVDNAKRKKSTKRRKEKEQA 385
           AQTLLFVA+LPQQKALL ++++N KRK+STK++++   A
Sbjct: 361 AQTLLFVAELPQQKALLPATLENTKRKRSTKQQRDMAHA 399

[Close]

BLAST of Sed0022381 vs. ExPASy Swiss-Prot
Match: Q9FNY7 (N-glycosylase/DNA lyase OGG1 OS=Arabidopsis thaliana OX=3702 GN=OGG1 PE=1 SV=1)

HSP 1 Score: 443.4 bits (1139), Expect = 2.8e-123
Identity = 233/356 (65.45%), Postives = 274/356 (76.97%), Query Frame = 0


Query: 12  MSKRLRTTPPSTPSAKPPP--PPPTPQLSRSKGTAVSLRQPKRGLTLTLSNWVPLNLSRS 71
           M +   T+ PS  S   PP  PP TP L +      +   PK         W PL L+ +
Sbjct: 1   MKRPRPTSQPSISSTVKPPLSPPVTPILKQKLHRTGT---PK---------WFPLKLTHT 60

Query: 72  DLSLPLTFPTGQTFRWKQTAALQFTGVVGPHLISLNQLP-KAHVSYCLHSSSSSSASAAA 131
           +L+LPLTFPTGQTFRWK+T A+Q++G +GPHL+SL Q P    VSYC+H S+S     +A
Sbjct: 61  ELTLPLTFPTGQTFRWKKTGAIQYSGTIGPHLVSLRQRPGDDAVSYCVHCSTSPK---SA 120

Query: 132 RSALLDFLNAGISLRALWEVFSAADPTFHALARLLEGARVLRQHPLECLVQFLCSSNNNI 191
             ALLDFLNA ISL  LW  FS  DP F  LAR L GARVLRQ PLECL+QFLCSSNNNI
Sbjct: 121 ELALLDFLNAEISLAELWSDFSKKDPRFGELARHLRGARVLRQDPLECLIQFLCSSNNNI 180

Query: 192 ARITKMVDYISSLGNYLGNVGGFDFHEFPTLERLSLVSEAELREAGFGYRAKYIIGTINA 251
           ARITKMVD++SSLG +LG++ GF+FH+FP+L+RLS VSE E R+AGFGYRAKYI GT+NA
Sbjct: 181 ARITKMVDFVSSLGLHLGDIDGFEFHQFPSLDRLSRVSEEEFRKAGFGYRAKYITGTVNA 240

Query: 252 LEAKPGGGAEWLLSLRDLDLEEVIDALSTLPGVGPKVAACVALFSLDQHHAIPVDTHVWQ 311
           L+AKPGGG EWLLSLR ++L+E + AL TLPGVGPKVAAC+ALFSLDQH AIPVDTHVWQ
Sbjct: 241 LQAKPGGGNEWLLSLRKVELQEAVAALCTLPGVGPKVAACIALFSLDQHSAIPVDTHVWQ 300

Query: 312 IATRYLVPELAGARLTPKLCNRVAEAFVSKYGKYAGWAQTLLFVADLPQQKALLQS 365
           IAT YL+P+LAGA+LTPKL  RVAEAFVSKYG+YAGWAQTLLF+A+LP QK LLQS
Sbjct: 301 IATNYLLPDLAGAKLTPKLHGRVAEAFVSKYGEYAGWAQTLLFIAELPAQKTLLQS 341

[Close]

BLAST of Sed0022381 vs. ExPASy Swiss-Prot
Match: O15527 (N-glycosylase/DNA lyase OS=Homo sapiens OX=9606 GN=OGG1 PE=1 SV=2)

HSP 1 Score: 200.3 bits (508), Expect = 4.1e-50
Identity = 126/336 (37.50%), Postives = 187/336 (55.65%), Query Frame = 0


Query: 48  RQPKRGLTLTLSNWVPLNLSRSDLSLPLTFPTGQTFRWKQTAALQFTGVVGPHLISLNQL 107
           R   R L  T + W  +   RS+L L L  P+GQ+FRW++ +   ++GV+   + +L Q 
Sbjct: 10  RMGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLADQVWTLTQT 69

Query: 108 -PKAHVS-YCLHSSSSSSASAAARSALLDFLNAGISLRALWEVFSAADPTFHALARLLEG 167
             + H + Y    S +S  +     A+  +    ++L  L+  + + D  F  +A+  +G
Sbjct: 70  EEQLHCTVYRGDKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHFQEVAQKFQG 129

Query: 168 ARVLRQHPLECLVQFLCSSNNNIARITKMVDYI-SSLGNYLGNVGGFDFHEFPTLERLSL 227
            R+LRQ P+ECL  F+CSSNNNIARIT MV+ +  + G  L  +    +H FP+L+ L+ 
Sbjct: 130 VRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHGFPSLQALAG 189

Query: 228 VS-EAELREAGFGYRAKYIIGTINALEAKPGGGAEWLLSLRDLDLEEVIDALSTLPGVGP 287
              EA LR+ G GYRA+Y+  +  A+  + GG A WL  LR+   EE   AL  LPGVG 
Sbjct: 190 PEVEAHLRKLGLGYRARYVSASARAILEEQGGLA-WLQQLRESSYEEAHKALCILPGVGT 249

Query: 288 KVAACVALFSLDQHHAIPVDTHVWQIATRYLV--PELAGAR-LTPKLCNRVAEAFVSKYG 347
           KVA C+ L +LD+  A+PVD H+W IA R     P  + A+  +P+    +   F S +G
Sbjct: 250 KVADCICLMALDKPQAVPVDVHMWHIAQRDYSWHPTTSQAKGPSPQTNKELGNFFRSLWG 309

Query: 348 KYAGWAQTLLFVADLPQQKALLQSSVDNAKRKKSTK 377
            YAGWAQ +LF ADL Q +    +    AKR+K +K
Sbjct: 310 PYAGWAQAVLFSADLRQSR---HAQEPPAKRRKGSK 341

[Close]

BLAST of Sed0022381 vs. ExPASy Swiss-Prot
Match: O08760 (N-glycosylase/DNA lyase OS=Mus musculus OX=10090 GN=Ogg1 PE=1 SV=2)

HSP 1 Score: 199.1 bits (505), Expect = 9.1e-50
Identity = 130/335 (38.81%), Postives = 182/335 (54.33%), Query Frame = 0


Query: 52  RGLTLTLSNWVPLNLSRSDLSLPLTFPTGQTFRWKQTAALQFTGVVGPHLISLNQLPKAH 111
           R L+ + + W  +   RS+L L L   +GQ+FRWK+ +   ++GV+   + +L Q     
Sbjct: 14  RTLSSSPALWASIPCPRSELRLDLVLASGQSFRWKEQSPAHWSGVLADQVWTLTQTEDQ- 73

Query: 112 VSYCL----HSSSSSSASAAARSALLDFLNAGISLRALWEVFSAADPTFHALARLLEGAR 171
             YC       S  S  +      L  +    +SL  L+  +++ D  F  +A+  +G R
Sbjct: 74  -LYCTVYRGDDSQVSRPTLEELETLHKYFQLDVSLAQLYSHWASVDSHFQRVAQKFQGVR 133

Query: 172 VLRQHPLECLVQFLCSSNNNIARITKMVDYI-SSLGNYLGNVGGFDFHEFPTLERLS-LV 231
           +LRQ P ECL  F+CSSNNNIARIT MV+ +  + G  L  +    +H FP L  L+   
Sbjct: 134 LLRQDPTECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHGFPNLHALAGPE 193

Query: 232 SEAELREAGFGYRAKYIIGTINALEAKPGGGAEWLLSLRDLDLEEVIDALSTLPGVGPKV 291
           +E  LR+ G GYRA+Y+  +  A+  + GG A WL  LR    EE   AL TLPGVG KV
Sbjct: 194 AETHLRKLGLGYRARYVRASAKAILEEQGGPA-WLQQLRVAPYEEAHKALCTLPGVGAKV 253

Query: 292 AACVALFSLDQHHAIPVDTHVWQIATRYL--VPELAGARLTPKLCNR-VAEAFVSKYGKY 351
           A C+ L +LD+  A+PVD HVWQIA R     P+ + A+    L N+ +   F + +G Y
Sbjct: 254 ADCICLMALDKPQAVPVDVHVWQIAHRDYGWHPKTSQAKGPSPLANKELGNFFRNLWGPY 313

Query: 352 AGWAQTLLFVADLPQQKALLQSSVDNAKRKKSTKR 378
           AGWAQ +LF ADL Q      S    AKRKK +KR
Sbjct: 314 AGWAQAVLFSADLRQPSL---SREPPAKRKKGSKR 342

[Close]

BLAST of Sed0022381 vs. ExPASy Swiss-Prot
Match: O70249 (N-glycosylase/DNA lyase OS=Rattus norvegicus OX=10116 GN=Ogg1 PE=2 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 2.0e-49
Identity = 128/344 (37.21%), Postives = 184/344 (53.49%), Query Frame = 0


Query: 43  TAVSLRQPKRGLTLTLSNWVPLNLSRSDLSLPLTFPTGQTFRWKQTAALQFTGVVGPHLI 102
           +++S     R LT + + W  +   RS+L L L   +GQ+FRW++ +   ++GV+   + 
Sbjct: 5   SSLSSSMRHRTLTSSPALWASIPCPRSELRLDLVLASGQSFRWREQSPAHWSGVLADQVW 64

Query: 103 SLNQLPKAHVSYCL----HSSSSSSASAAARSALLDFLNAGISLRALWEVFSAADPTFHA 162
           +L Q       YC             +      L  +    +SL  L+  +++ D  F +
Sbjct: 65  TLTQTEDQ--LYCTVYRGDKGQVGRPTLEELETLHKYFQLDVSLTQLYSHWASVDSHFQS 124

Query: 163 LARLLEGARVLRQHPLECLVQFLCSSNNNIARITKMVDYI-SSLGNYLGNVGGFDFHEFP 222
           +A+  +G R+LRQ P ECL  F+CSSNNNIARIT MV+ +  + G  L  +    +H FP
Sbjct: 125 VAQKFQGVRLLRQDPTECLFSFICSSNNNIARITGMVERLCQAFGPRLVQLDDVTYHGFP 184

Query: 223 TLERLSLVS-EAELREAGFGYRAKYIIGTINALEAKPGGGAEWLLSLRDLDLEEVIDALS 282
            L  L+    E  LR+ G GYRA+Y+  +  A+  + GG A WL  LR    EE   AL 
Sbjct: 185 NLHALAGPEVETHLRKLGLGYRARYVCASAKAILEEQGGPA-WLQQLRVASYEEAHKALC 244

Query: 283 TLPGVGPKVAACVALFSLDQHHAIPVDTHVWQIATRYL--VPELAGARLTPKLCNR-VAE 342
           TLPGVG KVA C+ L +LD+  A+PVD HVWQIA R     P+ +  +    L N+ +  
Sbjct: 245 TLPGVGTKVADCICLMALDKPQAVPVDIHVWQIAHRDYGWQPKTSQTKGPSPLANKELGN 304

Query: 343 AFVSKYGKYAGWAQTLLFVADLPQQKALLQSSVDNAKRKKSTKR 378
            F + +G YAGWAQ +LF ADL QQ     S    AKRKK +K+
Sbjct: 305 FFRNLWGPYAGWAQAVLFSADLRQQNL---SREPPAKRKKGSKK 342

[Close]

BLAST of Sed0022381 vs. ExPASy Swiss-Prot
Match: Q9V3I8 (N-glycosylase/DNA lyase OS=Drosophila melanogaster OX=7227 GN=Ogg1 PE=2 SV=2)

HSP 1 Score: 182.6 bits (462), Expect = 8.8e-45
Identity = 114/326 (34.97%), Postives = 180/326 (55.21%), Query Frame = 0


Query: 64  LNLSRSDLSLPLTFPTGQTFRWKQTA---ALQFTGVVGPHLISLNQLPKAHVSYCLHSSS 123
           + LS  +  L  T   GQ+FRW+        ++ GVV      L Q  ++ ++Y  + +S
Sbjct: 27  IGLSLEECDLERTLLGGQSFRWRSICDGNRTKYGGVVFNTYWVLQQ-EESFITYEAYGTS 86

Query: 124 SSSASAAARSALLDFLNAGISLRALWEVFSAADPTFHALARLLEGARVLRQHPLECLVQF 183
           S  A+    S + D+L     L+   + + + D  F  +  L +  R+L Q P E +  F
Sbjct: 87  SPLATKDYSSLISDYLRVDFDLKVNQKDWLSKDDNF--VKFLSKPVRLLSQEPFENIFSF 146

Query: 184 LCSSNNNIARITKMVD-YISSLGNYLGNVGGFDFHEFPTLERLSLVS----EAELREAGF 243
           LCS NNNI RI+ M++ + ++ G  +G+  G D + FPT+ R   +      A+LR A F
Sbjct: 147 LCSQNNNIKRISSMIEWFCATFGTKIGHFNGADAYTFPTINRFHDIPCEDLNAQLRAAKF 206

Query: 244 GYRAKYIIGTINALEAKPGGGAEWLLSLRDLDLEEVIDALSTLPGVGPKVAACVALFSLD 303
           GYRAK+I  T+  ++ K  GG  W +SL+ +  E+  + L+ LPG+G KVA C+ L S+ 
Sbjct: 207 GYRAKFIAQTLQEIQKK--GGQNWFISLKSMPFEKAREELTLLPGIGYKVADCICLMSMG 266

Query: 304 QHHAIPVDTHVWQIATRYLVPELAGAR-LTPKLCNRVAEAFVSKYGKYAGWAQTLLFVAD 363
              ++PVD H+++IA  Y +P L G + +T K+   V++ F   +GKYAGWAQ +LF AD
Sbjct: 267 HLESVPVDIHIYRIAQNYYLPHLTGQKNVTKKIYEEVSKHFQKLHGKYAGWAQAILFSAD 326

Query: 364 LPQQKALLQSSVDNAKRKKSTKRRKE 381
           L Q     Q++   A +KKS K+ K+
Sbjct: 327 LSQ----FQNTSTVACKKKSNKKPKK 343

[Close]

BLAST of Sed0022381 vs. ExPASy TrEMBL
Match: A0A1S3CS00 (DNA-(apurinic or apyrimidinic site) lyase OS=Cucumis melo OX=3656 GN=LOC103504082 PE=3 SV=1)

HSP 1 Score: 610.9 bits (1574), Expect = 3.7e-171
Identity = 321/406 (79.06%), Postives = 351/406 (86.45%), Query Frame = 0


Query: 1   MHTFSSTPFLQMSKRLRTTPPSTPSAK---PPPPPPTPQLSRSKGTAVSL----RQPKRG 60
           M + S  P L M+KR + T PSTPS K   PPP PPTPQLS SK T VS+    + P + 
Sbjct: 1   MPSLSFKPLLLMTKRFKPTTPSTPSTKPSPPPPSPPTPQLSHSKPTTVSIHHSSKNPNKT 60

Query: 61  LTL-------TLSNWVPLNLSRSDLSLPLTFPTGQTFRWKQTAALQFTGVVGPHLISLNQ 120
           LTL       + SNWV LNL+RSDLSLPLTFPTGQTFRWKQT  L+FTGVVG HLISLN 
Sbjct: 61  LTLLKSPQSPSSSNWVSLNLTRSDLSLPLTFPTGQTFRWKQTNPLEFTGVVGSHLISLNH 120

Query: 121 LPKAHVSYCLH-SSSSSSASAAARSALLDFLNAGISLRALWEVFSAADPTFHALARLLEG 180
           LP   VSYCLH SS+S+S+SAAAR ALLDFLNAGISL ++WEVFSAADP F ALAR LEG
Sbjct: 121 LPNGEVSYCLHFSSTSTSSSAAARLALLDFLNAGISLSSIWEVFSAADPRFDALARHLEG 180

Query: 181 ARVLRQHPLECLVQFLCSSNNNIARITKMVDYISSLGNYLGNVGGFDFHEFPTLERLSLV 240
           ARVLRQ PLECL+QFLCSSNNNI RITKMVDYISSLGNYLGNVGGFDFHEFP+LERLSLV
Sbjct: 181 ARVLRQDPLECLIQFLCSSNNNIGRITKMVDYISSLGNYLGNVGGFDFHEFPSLERLSLV 240

Query: 241 SEAELREAGFGYRAKYIIGTINALEAKPGGGAEWLLSLRDLDLEEVIDALSTLPGVGPKV 300
           SEAELREAGFGYRAKYIIGT+NAL+AKPGGGAEWLLSLRD DLEEVI ALSTLPGVGPKV
Sbjct: 241 SEAELREAGFGYRAKYIIGTVNALKAKPGGGAEWLLSLRDSDLEEVIGALSTLPGVGPKV 300

Query: 301 AACVALFSLDQHHAIPVDTHVWQIATRYLVPELAGARLTPKLCNRVAEAFVSKYGKYAGW 360
           AACVALFSLDQHHAIPVDTHVWQIATRYLVPELAGARLTPKLCNRVAEAFVSKYGKYAGW
Sbjct: 301 AACVALFSLDQHHAIPVDTHVWQIATRYLVPELAGARLTPKLCNRVAEAFVSKYGKYAGW 360

Query: 361 AQTLLFVADLPQQKALLQSSVDNAKRKKSTKRRKEKEQAGNMNQCE 392
           AQTLLFVA+LPQQKALL ++++N KRK+STK++++   AGN++QCE
Sbjct: 361 AQTLLFVAELPQQKALLPATLENTKRKRSTKQQRDMAHAGNIDQCE 406

[Close]

BLAST of Sed0022381 vs. ExPASy TrEMBL
Match: A0A0A0KIU8 (DNA-(apurinic or apyrimidinic site) lyase OS=Cucumis sativus OX=3659 GN=Csa_6G382890 PE=3 SV=1)

HSP 1 Score: 601.7 bits (1550), Expect = 2.2e-168
Identity = 316/405 (78.02%), Postives = 343/405 (84.69%), Query Frame = 0


Query: 1   MHTFSSTPFLQMSKRLRTTPPSTPSAK---PPPPPPTPQLSRSKGTAVSLRQPKRGLTLT 60
           M + S  P L M+KRL+ TPPSTPS K   PPP PPTPQLS SK T VSL    +    T
Sbjct: 1   MPSLSFKPLLLMTKRLKPTPPSTPSTKPSPPPPSPPTPQLSHSKPTTVSLHHSSKNPNKT 60

Query: 61  L-----------SNWVPLNLSRSDLSLPLTFPTGQTFRWKQTAALQFTGVVGPHLISLNQ 120
           L           SNWV LNL+RSDLSLPLTFPTGQTFRWKQT   +FTGVVG HLISLN 
Sbjct: 61  LPLLKSPQSPSSSNWVSLNLTRSDLSLPLTFPTGQTFRWKQTNPFEFTGVVGSHLISLNH 120

Query: 121 LPKAHVSYCLHSSSSSSASAAARSALLDFLNAGISLRALWEVFSAADPTFHALARLLEGA 180
           LP   VSYCLH SS+SS SAAAR ALLDFLNA ISL ++WEVFSAADP F ALAR  EGA
Sbjct: 121 LPNGDVSYCLHFSSTSS-SAAARLALLDFLNASISLSSIWEVFSAADPRFDALARHFEGA 180

Query: 181 RVLRQHPLECLVQFLCSSNNNIARITKMVDYISSLGNYLGNVGGFDFHEFPTLERLSLVS 240
           RVLRQ PLECL+QFLCSSNNNI RITKMVDYISSLGNYLGNVGGFDF+EFP+LERLSLVS
Sbjct: 181 RVLRQDPLECLIQFLCSSNNNIGRITKMVDYISSLGNYLGNVGGFDFYEFPSLERLSLVS 240

Query: 241 EAELREAGFGYRAKYIIGTINALEAKPGGGAEWLLSLRDLDLEEVIDALSTLPGVGPKVA 300
           EAELREAGFGYRAKYIIG +NAL+AKP GGAEWLLSLRD DLEEVI+ALSTLPGVGPKVA
Sbjct: 241 EAELREAGFGYRAKYIIGAVNALKAKPVGGAEWLLSLRDSDLEEVIEALSTLPGVGPKVA 300

Query: 301 ACVALFSLDQHHAIPVDTHVWQIATRYLVPELAGARLTPKLCNRVAEAFVSKYGKYAGWA 360
           ACVALFSLDQHHAIPVDTHVWQIATRYLVPELAGARLTPKLCNRVAEAFVSKYGKYAGWA
Sbjct: 301 ACVALFSLDQHHAIPVDTHVWQIATRYLVPELAGARLTPKLCNRVAEAFVSKYGKYAGWA 360

Query: 361 QTLLFVADLPQQKALLQSSVDNAKRKKSTKRRKEKEQAGNMNQCE 392
           QTLLF+A+LPQQKALL ++++N KRK+STK++K+   AGN++QCE
Sbjct: 361 QTLLFIAELPQQKALLPANLENTKRKRSTKQQKDMAHAGNIDQCE 404

[Close]

BLAST of Sed0022381 vs. ExPASy TrEMBL
Match: A0A5D3CBS3 (DNA-(apurinic or apyrimidinic site) lyase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold314G00460 PE=3 SV=1)

HSP 1 Score: 599.0 bits (1543), Expect = 1.5e-167
Identity = 316/399 (79.20%), Postives = 344/399 (86.22%), Query Frame = 0


Query: 1   MHTFSSTPFLQMSKRLRTTPPSTPSAK---PPPPPPTPQLSRSKGTAVSL----RQPKRG 60
           M + S  P L M+KR + T PSTPS K   PPP PPTPQLS SK T VS+    + P + 
Sbjct: 1   MPSLSFKPLLLMTKRFKPTTPSTPSTKPSPPPPSPPTPQLSHSKPTTVSIHHSSKNPNKT 60

Query: 61  LTL-------TLSNWVPLNLSRSDLSLPLTFPTGQTFRWKQTAALQFTGVVGPHLISLNQ 120
           LTL       + SNWV LNL+RSDLSLPLTFPTGQTFRWKQT  L+FTGVVG HLISLN 
Sbjct: 61  LTLLKSPQSPSSSNWVSLNLTRSDLSLPLTFPTGQTFRWKQTNPLEFTGVVGSHLISLNH 120

Query: 121 LPKAHVSYCLH-SSSSSSASAAARSALLDFLNAGISLRALWEVFSAADPTFHALARLLEG 180
           LP   VSYCLH SS+S+S+SAAAR ALLDFLNAGISL ++WEVFSAADP F ALAR LEG
Sbjct: 121 LPNGEVSYCLHFSSTSTSSSAAARLALLDFLNAGISLSSIWEVFSAADPRFDALARHLEG 180

Query: 181 ARVLRQHPLECLVQFLCSSNNNIARITKMVDYISSLGNYLGNVGGFDFHEFPTLERLSLV 240
           ARVLRQ PLECL+QFLCSSNNNI RITKMVDYISSLGNYLGNVGGFDFHEFP+LERLSLV
Sbjct: 181 ARVLRQDPLECLIQFLCSSNNNIGRITKMVDYISSLGNYLGNVGGFDFHEFPSLERLSLV 240

Query: 241 SEAELREAGFGYRAKYIIGTINALEAKPGGGAEWLLSLRDLDLEEVIDALSTLPGVGPKV 300
           SEAELREAGFGYRAKYIIGT+NAL+AKPGGGAEWLLSLRD DLEEVI ALSTLPGVGPKV
Sbjct: 241 SEAELREAGFGYRAKYIIGTVNALKAKPGGGAEWLLSLRDSDLEEVIGALSTLPGVGPKV 300

Query: 301 AACVALFSLDQHHAIPVDTHVWQIATRYLVPELAGARLTPKLCNRVAEAFVSKYGKYAGW 360
           AACVALFSLDQHHAIPVDTHVWQIATRYLVPELAGARLTPKLCNRVAEAFVSKYGKYAGW
Sbjct: 301 AACVALFSLDQHHAIPVDTHVWQIATRYLVPELAGARLTPKLCNRVAEAFVSKYGKYAGW 360

Query: 361 AQTLLFVADLPQQKALLQSSVDNAKRKKSTKRRKEKEQA 385
           AQTLLFVA+LPQQKALL ++++N KRK+STK++++   A
Sbjct: 361 AQTLLFVAELPQQKALLPATLENTKRKRSTKQQRDMAHA 399

[Close]

BLAST of Sed0022381 vs. ExPASy TrEMBL
Match: A0A1S4E5V3 (DNA-(apurinic or apyrimidinic site) lyase OS=Cucumis melo OX=3656 GN=LOC103504082 PE=3 SV=1)

HSP 1 Score: 599.0 bits (1543), Expect = 1.5e-167
Identity = 316/399 (79.20%), Postives = 344/399 (86.22%), Query Frame = 0


Query: 1   MHTFSSTPFLQMSKRLRTTPPSTPSAK---PPPPPPTPQLSRSKGTAVSL----RQPKRG 60
           M + S  P L M+KR + T PSTPS K   PPP PPTPQLS SK T VS+    + P + 
Sbjct: 1   MPSLSFKPLLLMTKRFKPTTPSTPSTKPSPPPPSPPTPQLSHSKPTTVSIHHSSKNPNKT 60

Query: 61  LTL-------TLSNWVPLNLSRSDLSLPLTFPTGQTFRWKQTAALQFTGVVGPHLISLNQ 120
           LTL       + SNWV LNL+RSDLSLPLTFPTGQTFRWKQT  L+FTGVVG HLISLN 
Sbjct: 61  LTLLKSPQSPSSSNWVSLNLTRSDLSLPLTFPTGQTFRWKQTNPLEFTGVVGSHLISLNH 120

Query: 121 LPKAHVSYCLH-SSSSSSASAAARSALLDFLNAGISLRALWEVFSAADPTFHALARLLEG 180
           LP   VSYCLH SS+S+S+SAAAR ALLDFLNAGISL ++WEVFSAADP F ALAR LEG
Sbjct: 121 LPNGEVSYCLHFSSTSTSSSAAARLALLDFLNAGISLSSIWEVFSAADPRFDALARHLEG 180

Query: 181 ARVLRQHPLECLVQFLCSSNNNIARITKMVDYISSLGNYLGNVGGFDFHEFPTLERLSLV 240
           ARVLRQ PLECL+QFLCSSNNNI RITKMVDYISSLGNYLGNVGGFDFHEFP+LERLSLV
Sbjct: 181 ARVLRQDPLECLIQFLCSSNNNIGRITKMVDYISSLGNYLGNVGGFDFHEFPSLERLSLV 240

Query: 241 SEAELREAGFGYRAKYIIGTINALEAKPGGGAEWLLSLRDLDLEEVIDALSTLPGVGPKV 300
           SEAELREAGFGYRAKYIIGT+NAL+AKPGGGAEWLLSLRD DLEEVI ALSTLPGVGPKV
Sbjct: 241 SEAELREAGFGYRAKYIIGTVNALKAKPGGGAEWLLSLRDSDLEEVIGALSTLPGVGPKV 300

Query: 301 AACVALFSLDQHHAIPVDTHVWQIATRYLVPELAGARLTPKLCNRVAEAFVSKYGKYAGW 360
           AACVALFSLDQHHAIPVDTHVWQIATRYLVPELAGARLTPKLCNRVAEAFVSKYGKYAGW
Sbjct: 301 AACVALFSLDQHHAIPVDTHVWQIATRYLVPELAGARLTPKLCNRVAEAFVSKYGKYAGW 360

Query: 361 AQTLLFVADLPQQKALLQSSVDNAKRKKSTKRRKEKEQA 385
           AQTLLFVA+LPQQKALL ++++N KRK+STK++++   A
Sbjct: 361 AQTLLFVAELPQQKALLPATLENTKRKRSTKQQRDMAHA 399

[Close]

BLAST of Sed0022381 vs. ExPASy TrEMBL
Match: A0A5A7UI18 (DNA-(apurinic or apyrimidinic site) lyase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold221G00460 PE=3 SV=1)

HSP 1 Score: 594.3 bits (1531), Expect = 3.6e-166
Identity = 316/400 (79.00%), Postives = 344/400 (86.00%), Query Frame = 0


Query: 1   MHTFSSTPFLQMSKRLRTTPPSTPSAK---PPPPPPTPQLSRSKGTAVSL----RQPKRG 60
           M + S  P L M+KR + T PSTPS K   PPP PPTPQLS SK T VS+    + P + 
Sbjct: 1   MPSLSFKPLLLMTKRFKPTTPSTPSTKPSPPPPSPPTPQLSHSKPTTVSIHHSSKNPNKT 60

Query: 61  LTL-------TLSNWVPLNLSRSDLSLPLTFPTGQTFRWKQTAALQFTGVVGPHLISLNQ 120
           LTL       + SNWV LNL+RSDLSLPLTFPTGQTFRWKQT  L+FTGVVG HLISLN 
Sbjct: 61  LTLLKSPQSPSSSNWVSLNLTRSDLSLPLTFPTGQTFRWKQTNPLEFTGVVGSHLISLNH 120

Query: 121 LPKAHVSYCLH-SSSSSSASAAARSALLDFLNAGISLRALWEVFSAADPTFHALARLLEG 180
           LP   VSYCLH SS+S+S+SAAAR ALLDFLNAGISL ++WEVFSAADP F ALAR LEG
Sbjct: 121 LPNGEVSYCLHFSSTSTSSSAAARLALLDFLNAGISLSSIWEVFSAADPRFDALARHLEG 180

Query: 181 ARVLRQHPLECLVQFLCSSNNNIARITKMVDYISSLGNYLGNVGGFDFHEFPTLERLSLV 240
           ARVLRQ PLECL+QFLCSSNNNI RITKMVDYISSLGNYLGNVGGFDFHEFP+LERLSLV
Sbjct: 181 ARVLRQDPLECLIQFLCSSNNNIGRITKMVDYISSLGNYLGNVGGFDFHEFPSLERLSLV 240

Query: 241 SEAELREAGFGY-RAKYIIGTINALEAKPGGGAEWLLSLRDLDLEEVIDALSTLPGVGPK 300
           SEAELREAGFGY RAKYIIGT+NAL+AKPGGGAEWLLSLRD DLEEVI ALSTLPGVGPK
Sbjct: 241 SEAELREAGFGYSRAKYIIGTVNALKAKPGGGAEWLLSLRDSDLEEVIGALSTLPGVGPK 300

Query: 301 VAACVALFSLDQHHAIPVDTHVWQIATRYLVPELAGARLTPKLCNRVAEAFVSKYGKYAG 360
           VAACVALFSLDQHHAIPVDTHVWQIATRYLVPELAGARLTPKLCNRVAEAFVSKYGKYAG
Sbjct: 301 VAACVALFSLDQHHAIPVDTHVWQIATRYLVPELAGARLTPKLCNRVAEAFVSKYGKYAG 360

Query: 361 WAQTLLFVADLPQQKALLQSSVDNAKRKKSTKRRKEKEQA 385
           WAQTLLFVA+LPQQKALL ++++N KRK+STK++++   A
Sbjct: 361 WAQTLLFVAELPQQKALLPATLENTKRKRSTKQQRDMAHA 400

[Close]

BLAST of Sed0022381 vs. TAIR 10
Match: AT1G21710.1 (8-oxoguanine-DNA glycosylase 1 )

HSP 1 Score: 443.4 bits (1139), Expect = 2.0e-124
Identity = 233/356 (65.45%), Postives = 274/356 (76.97%), Query Frame = 0


Query: 12  MSKRLRTTPPSTPSAKPPP--PPPTPQLSRSKGTAVSLRQPKRGLTLTLSNWVPLNLSRS 71
           M +   T+ PS  S   PP  PP TP L +      +   PK         W PL L+ +
Sbjct: 1   MKRPRPTSQPSISSTVKPPLSPPVTPILKQKLHRTGT---PK---------WFPLKLTHT 60

Query: 72  DLSLPLTFPTGQTFRWKQTAALQFTGVVGPHLISLNQLP-KAHVSYCLHSSSSSSASAAA 131
           +L+LPLTFPTGQTFRWK+T A+Q++G +GPHL+SL Q P    VSYC+H S+S     +A
Sbjct: 61  ELTLPLTFPTGQTFRWKKTGAIQYSGTIGPHLVSLRQRPGDDAVSYCVHCSTSPK---SA 120

Query: 132 RSALLDFLNAGISLRALWEVFSAADPTFHALARLLEGARVLRQHPLECLVQFLCSSNNNI 191
             ALLDFLNA ISL  LW  FS  DP F  LAR L GARVLRQ PLECL+QFLCSSNNNI
Sbjct: 121 ELALLDFLNAEISLAELWSDFSKKDPRFGELARHLRGARVLRQDPLECLIQFLCSSNNNI 180

Query: 192 ARITKMVDYISSLGNYLGNVGGFDFHEFPTLERLSLVSEAELREAGFGYRAKYIIGTINA 251
           ARITKMVD++SSLG +LG++ GF+FH+FP+L+RLS VSE E R+AGFGYRAKYI GT+NA
Sbjct: 181 ARITKMVDFVSSLGLHLGDIDGFEFHQFPSLDRLSRVSEEEFRKAGFGYRAKYITGTVNA 240

Query: 252 LEAKPGGGAEWLLSLRDLDLEEVIDALSTLPGVGPKVAACVALFSLDQHHAIPVDTHVWQ 311
           L+AKPGGG EWLLSLR ++L+E + AL TLPGVGPKVAAC+ALFSLDQH AIPVDTHVWQ
Sbjct: 241 LQAKPGGGNEWLLSLRKVELQEAVAALCTLPGVGPKVAACIALFSLDQHSAIPVDTHVWQ 300

Query: 312 IATRYLVPELAGARLTPKLCNRVAEAFVSKYGKYAGWAQTLLFVADLPQQKALLQS 365
           IAT YL+P+LAGA+LTPKL  RVAEAFVSKYG+YAGWAQTLLF+A+LP QK LLQS
Sbjct: 301 IATNYLLPDLAGAKLTPKLHGRVAEAFVSKYGEYAGWAQTLLFIAELPAQKTLLQS 341

[Close]

BLAST of Sed0022381 vs. TAIR 10
Match: AT3G47830.1 (DNA glycosylase superfamily protein )

HSP 1 Score: 55.1 bits (131), Expect = 1.5e-07
Identity = 33/69 (47.83%), Postives = 41/69 (59.42%), Query Frame = 0


Query: 263 LRDLDLEEVIDALSTLPGVGPKVAACVALFSLDQHHAIPVDTHVWQIATRY-LVPELAGA 322
           LR L +EEV   LS   GVGPK  +CV +F+L QH+  PVDTHV++IA     VP+ A  
Sbjct: 175 LRGLSVEEVKTELSHFKGVGPKTVSCVLMFNL-QHNDFPVDTHVFEIAKALGWVPKTADR 234

Query: 323 RLTPKLCNR 331
             T    NR
Sbjct: 235 NKTYVHLNR 242

The following BLAST results are available for this feature:

BLAST of Sed0022381 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008466739.1	7.7e-171	79.06	PREDICTED: N-glycosylase/DNA lyase OGG1 isoform X1 [Cucumis melo]	[more]
XP_038885236.1	3.8e-170	79.20	N-glycosylase/DNA lyase OGG1 isoform X2 [Benincasa hispida]	[more]
XP_004149809.2	4.6e-168	78.02	N-glycosylase/DNA lyase OGG1 [Cucumis sativus] >KGN47701.1 hypothetical protein ...	[more]
XP_038885235.1	1.8e-167	76.89	N-glycosylase/DNA lyase OGG1 isoform X1 [Benincasa hispida]	[more]
XP_016903621.1	3.0e-167	79.20	PREDICTED: N-glycosylase/DNA lyase OGG1 isoform X2 [Cucumis melo] >TYK08955.1 N-...	[more]

BLAST of Sed0022381 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FNY7	2.8e-123	65.45	N-glycosylase/DNA lyase OGG1 OS=Arabidopsis thaliana OX=3702 GN=OGG1 PE=1 SV=1	[more]
O15527	4.1e-50	37.50	N-glycosylase/DNA lyase OS=Homo sapiens OX=9606 GN=OGG1 PE=1 SV=2	[more]
O08760	9.1e-50	38.81	N-glycosylase/DNA lyase OS=Mus musculus OX=10090 GN=Ogg1 PE=1 SV=2	[more]
O70249	2.0e-49	37.21	N-glycosylase/DNA lyase OS=Rattus norvegicus OX=10116 GN=Ogg1 PE=2 SV=1	[more]
Q9V3I8	8.8e-45	34.97	N-glycosylase/DNA lyase OS=Drosophila melanogaster OX=7227 GN=Ogg1 PE=2 SV=2	[more]

BLAST of Sed0022381 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CS00	3.7e-171	79.06	DNA-(apurinic or apyrimidinic site) lyase OS=Cucumis melo OX=3656 GN=LOC10350408...	[more]
A0A0A0KIU8	2.2e-168	78.02	DNA-(apurinic or apyrimidinic site) lyase OS=Cucumis sativus OX=3659 GN=Csa_6G38...	[more]
A0A5D3CBS3	1.5e-167	79.20	DNA-(apurinic or apyrimidinic site) lyase OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A1S4E5V3	1.5e-167	79.20	DNA-(apurinic or apyrimidinic site) lyase OS=Cucumis melo OX=3656 GN=LOC10350408...	[more]
A0A5A7UI18	3.6e-166	79.00	DNA-(apurinic or apyrimidinic site) lyase OS=Cucumis melo var. makuwa OX=1194695...	[more]

BLAST of Sed0022381 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G21710.1	2.0e-124	65.45	8-oxoguanine-DNA glycosylase 1	[more]
AT3G47830.1	1.5e-07	47.83	DNA glycosylase superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003265	HhH-GPD domain	SMART	SM00478	endo3end	coord: 182..309 e-value: 8.1E-4 score: 11.6
IPR003265	HhH-GPD domain	PFAM	PF00730	HhH-GPD	coord: 178..308 e-value: 2.3E-10 score: 40.8
IPR003265	HhH-GPD domain	CDD	cd00056	ENDO3c	coord: 175..309 e-value: 1.31739E-25 score: 98.0826
None	No IPR available	GENE3D	1.10.340.30	Hypothetical protein; domain 2	coord: 172..296 e-value: 7.0E-40 score: 137.9
None	No IPR available	GENE3D	3.30.310.40		coord: 48..135 e-value: 2.9E-17 score: 64.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..37
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..49
None	No IPR available	PANTHER	PTHR10242:SF2	N-GLYCOSYLASE/DNA LYASE	coord: 59..309
None	No IPR available	PANTHER	PTHR10242	8-OXOGUANINE DNA GLYCOSYLASE	coord: 59..309
None	No IPR available	SUPERFAMILY	55945	TATA-box binding protein-like	coord: 60..171
IPR012904	8-oxoguanine DNA glycosylase, N-terminal	PFAM	PF07934	OGG_N	coord: 64..177 e-value: 1.9E-21 score: 76.4
IPR011257	DNA glycosylase	SUPERFAMILY	48150	DNA-glycosylase	coord: 173..309

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0022381.1	Sed0022381.1	mRNA
Sed0022381.2	Sed0022381.2	mRNA
Sed0022381.3	Sed0022381.3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006285	base-excision repair, AP site formation
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:0006289	nucleotide-excision repair
biological_process	GO:0006284	base-excision repair
biological_process	GO:0006281	DNA repair
cellular_component	GO:0005634	nucleus
molecular_function	GO:0034039	8-oxo-7,8-dihydroguanine DNA N-glycosylase activity
molecular_function	GO:0140078	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
molecular_function	GO:0003684	damaged DNA binding
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0008534	oxidized purine nucleobase lesion DNA N-glycosylase activity