Sed0022313 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTTCGTACTTGAAAAAAAAGTACAGGTTCGTCAATCCGAAACGATGAATTCCTATTGATTTGATAATTTCGGCTTAATTTTTGATTTGGGATTATAAATGTGCACTCAAAGTTCATTCATTTCCCATCCATTTCACTAATCATGGCTTCCATTGTTGCTACTCTTCCTCCGCCATTGTTGAGCCCCGCCAAAAGCTTCACCCTTCTCAATACTTCTCACAAGCTCTCTGTTTTTCCCATTATTGCAAGTAAGTTCATCTCTCCAATAGAGTTCCTATTTAGTCCGTTCGATCGTGTTTATTGAGCTCCATTTCTCCATGTTTATTTAGTTTGATTTTTGTTAGCGTAGTTTTTAGACATGGCCTTGAAATTATGGAAGTTGGGAAAAGGGTGTAGGTTTATAGGTTTGAAACTTTGGAATCTTACAGAGTTTTGTATAATTGATGGTTGATGTTGAAGGGTTGAAAAACAATTTGAATTTTTGAAGATTCACATTGGAAAGAGGGAGAAACCTCCAACATTAATAAGATAGGGGATTACTCATCTTAAATAATCTAATATGATATCGAAACTTATTAAATAAAAAAATGAAAGAATAAACCGACTTAGAAAAAAAGAACCACGGGAAAGGAGTGATGACATTAGATTTTGTAATTGTGCCTATCAAAATGTAGCCTTCAACACGACCTTACTTGAACAAGATCTTTTCTATAGATTGTACTATGGTGTCTTTGAGTTCTAAGGAGATAAGAACCTAAGTCTGTTGGATTAACCACTGCTTTGCGACTAGAAACGGCTTACGGGCTCAACTCCTGAAGCTGTAGATGATCGTTCTCGGCAGACTTGCCCTGTTGGGATGGTCGTAAGGAAGTCTGACAGACTTCTAAGTTCTAACAATTTAAAAAATATAGCCTCCACCACAACTTTCTCTTCCTAATGAATTTCTTCTTTTCTCTAAAATGGTTTCTCTCCTCATTCCAAATTACACTAAATAGGAACGAATGTAAATAATAAAGGGCTTAGAAGGAATGAGTTCGAGCTGGTTATCAACTTGAGAATATTTAATATTTTACAAGTTTCATTGACAACAAAATACCATAAGGTCATTGGTACGTTCTTTAGCAAGGGATATATAGTAATTATTCTAAGGAGTTAGTTAGAGCTTTGGTTATAAATAGAGTGGAAGAAAATGGAGAAGGTAGGCAATATTTTGGTGAATGGTTTAGGGCTTGAGAGAATGTTCTCAAGAGAGAGGGTCTAACCATTTTATATTTCAGTCTAGATTGGTTCATATCAGTCGTGTCTGTAAGAACTTTACAAGTTGGCATGAATATCAAGAAGAGAGGTAAAAAATACTCTGTATTATGTATGTTGTTCTGGCATACCTGTTTGATTGTGTGCAACTAATTGAAGCTCTCCTCATCTCGTTTATCATACCACTTATTATGAGTACATAATTCTTCAAAACCGCAGAGGGGCCTTCTGCCAATGTTCTTGTAAAGGCTATTGGGGACAGCTCTGGGTCTTCTACTTCCATCAATATTATTAAGTCTGTTCAAAATGTTGTAAGATCTTTCTTTCTTTTTTAAGCCTTCTTCTACAGTTTTAAGTTTTCCTTTCATATGGCTGTTTGATTGAAACCATCCTGGGATGATTTGGTCGTCAAATAAGGACATTGTATATGACAAAATGTTTAGAGATTATGAGTTCAATCCATAGTAGATATGTAACTAAAAATTAATGAATTAATTACCTTGACAACCAAGTAGGATCGGACAATTGTTCTATGAAAACGTTGAGGTGTGCACAAGCAAGCCCAAACACTCACAAAAAAAATATATTTAAAAATGTACATATTAGAGATCCTTACTTTATCTCACATTGAAAAGTTGAGGAGCTCTCAAAACCATATAAATATGTGAGCTACTCTCCTATCACCAACTGATTCTGAGGTAGAACTCCACTGTATTTAATATGGTACCAGAATATGATCCATAAATTCGGGTCCGACCCAAGTGGGTAAAACTAAGCGGGTATTTGAACCATAATTCGGATCCAATTCAAGCGCTTAAAGCTTAAGCTGGTATTTTATCCCAAACTTTGAATCCAGTCCAAGTGTGTATTTGATTCCTTTGTTTAAGTGATGTTTTCTTGTTTTTTTTGAAACAAGGGTAATCACGCCCATCCCTAAACCAAACACCAAGTGACATCGAAGGAATAATGTGTGAGTCTTGAACCTGGGACCTTGAAGGGAGCATACCTTCAAAACCCAAGTCTTAAACCACTGTGTCACCTCTTGGGGATGTGATGTTTTCTTGTTGAGGAAAGAATACTAGAAAACCGTGGCGATTCTTTCCTCCAAATTTATTGGTTCTCTTTTGTTACAATTAGCAAATTTCTCATTCTATAGGAAGTAAAATTTCACCTTAATCTTACAAGTATCTGTATCTTTCTGGCTAACTTGAGACAGTGGGATCAACCTGAAGATCGAATTGCACTTGTTGGTCTGGGATTAGCAGCTGTAGCTGGCGTATGGACAGCAACAAATCTTATTACGGTAATTGAAAAACAATGACCCACTTAGACAAAGGAGTCATTCTTTTTGCTTTGTTCCTTTCATCTTCAATGCATTAACTTGTTCGTTCTCAATTGCGTGTAGGCTATTGACAAGCTACCACTGCTTCCAGGTGTTTTAGAATTAATAGGAATACTGGTTTCTTCGGTAAGTAACAAGAAATCTCAGAACTTCATTATGCCATTTGGCAAGCTTGAACTCTGAAGCCATGGTTTTCCCTGGAAAATTCTATTGCTGACCCATGTTTCTGTTCTCCCCTGTCAATTCCAGTGGTTCGTGTATCGTTACCTCTTGTTCAAACCAAACCGGTACGTCGAAATTCATTAGATTTTTCACTTGGTTCACATGTGAAGGCCTCTCAGACCTGTATTTTCTACATATTTGTTGAATTATGTTAAATCATCGATCAACCTAAAAGTTTAAGCAGATGGATTAGCAAAAAATTTTGAACTGGCTTCTCTATCATTCACTGTAGGGGAGAGCTTTTGGAGATAATCAACAAGTCAGTAGCTGATGTATTGGGACAGTAAGTTGTTCTTGTTGTTAAAGGCCCTATTTGGTCCAAACTGGCTTCTCTATCATTCACTGCTGGTTGGTTTCTGAAATTTATTCAACAGTCCAGTGTGAATTGTAACCAAGATTGGTGTTTGATTCATCAATGCATTCCAATGTGAAATCTTCAATCCTTTAGTTTATGCATATATCGGTTTATGTTCAAAATTTTCTGTTATATTGGCTGTCTGAATCAGCTTACACAAACTTCAACTATTCTCTCAAAACAACCTGTCTGAACGTGCAACATTTGGATGTCAAAGAATTATGTAAGACATTAATTCTTACATATGTCATGACCATGAATTGATCTCATAACCTTTTGATTTCTCAA GTTCGTACTTGAAAAAAAAGTACAGGTTCGTCAATCCGAAACGATGAATTCCTATTGATTTGATAATTTCGGCTTAATTTTTGATTTGGGATTATAAATGTGCACTCAAAGTTCATTCATTTCCCATCCATTTCACTAATCATGGCTTCCATTGTTGCTACTCTTCCTCCGCCATTGTTGAGCCCCGCCAAAAGCTTCACCCTTCTCAATACTTCTCACAAGCTCTCTGTTTTTCCCATTATTGCAAAGGGGCCTTCTGCCAATGTTCTTGTAAAGGCTATTGGGGACAGCTCTGGGTCTTCTACTTCCATCAATATTATTAAGTCTGTTCAAAATGTTTGGGATCAACCTGAAGATCGAATTGCACTTGTTGGTCTGGGATTAGCAGCTGTAGCTGGCGTATGGACAGCAACAAATCTTATTACGGCTATTGACAAGCTACCACTGCTTCCAGGTGTTTTAGAATTAATAGGAATACTGGTTTCTTCGTGGTTCGTGTATCGTTACCTCTTGTTCAAACCAAACCGGGGAGAGCTTTTGGAGATAATCAACAAGTCAGTAGCTGATGTATTGGGACAGTAAGTTGTTCTTGTTGTTAAAGGCCCTATTTGGTCCAAACTGGCTTCTCTATCATTCACTGCTGGTTGGTTTCTGAAATTTATTCAACAGTCCAGTGTGAATTGTAACCAAGATTGGTGTTTGATTCATCAATGCATTCCAATGTGAAATCTTCAATCCTTTAGTTTATGCATATATCGGTTTATGTTCAAAATTTTCTGTTATATTGGCTGTCTGAATCAGCTTACACAAACTTCAACTATTCTCTCAAAACAACCTGTCTGAACGTGCAACATTTGGATGTCAAAGAATTATGTAAGACATTAATTCTTACATATGTCATGACCATGAATTGATCTCATAACCTTTTGATTTCTCAA ATGGCTTCCATTGTTGCTACTCTTCCTCCGCCATTGTTGAGCCCCGCCAAAAGCTTCACCCTTCTCAATACTTCTCACAAGCTCTCTGTTTTTCCCATTATTGCAAAGGGGCCTTCTGCCAATGTTCTTGTAAAGGCTATTGGGGACAGCTCTGGGTCTTCTACTTCCATCAATATTATTAAGTCTGTTCAAAATGTTTGGGATCAACCTGAAGATCGAATTGCACTTGTTGGTCTGGGATTAGCAGCTGTAGCTGGCGTATGGACAGCAACAAATCTTATTACGGCTATTGACAAGCTACCACTGCTTCCAGGTGTTTTAGAATTAATAGGAATACTGGTTTCTTCGTGGTTCGTGTATCGTTACCTCTTGTTCAAACCAAACCGGGGAGAGCTTTTGGAGATAATCAACAAGTCAGTAGCTGATGTATTGGGACAGTAA MASIVATLPPPLLSPAKSFTLLNTSHKLSVFPIIAKGPSANVLVKAIGDSSGSSTSINIIKSVQNVWDQPEDRIALVGLGLAAVAGVWTATNLITAIDKLPLLPGVLELIGILVSSWFVYRYLLFKPNRGELLEIINKSVADVLGQ Homology
BLAST of Sed0022313 vs. NCBI nr
Match: XP_023000405.1 (protein CURVATURE THYLAKOID 1C, chloroplastic [Cucurbita maxima] >XP_023000406.1 protein CURVATURE THYLAKOID 1C, chloroplastic [Cucurbita maxima]) HSP 1 Score: 221.9 bits (564), Expect = 3.7e-54 Identity = 117/146 (80.14%), Postives = 127/146 (86.99%), Query Frame = 0
BLAST of Sed0022313 vs. NCBI nr
Match: XP_038897597.1 (protein CURVATURE THYLAKOID 1C, chloroplastic [Benincasa hispida]) HSP 1 Score: 221.1 bits (562), Expect = 6.3e-54 Identity = 116/146 (79.45%), Postives = 127/146 (86.99%), Query Frame = 0
BLAST of Sed0022313 vs. NCBI nr
Match: KAG6593469.1 (Malonate--CoA ligase, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 220.7 bits (561), Expect = 8.3e-54 Identity = 119/147 (80.95%), Postives = 128/147 (87.07%), Query Frame = 0
BLAST of Sed0022313 vs. NCBI nr
Match: XP_022964632.1 (protein CURVATURE THYLAKOID 1C, chloroplastic [Cucurbita moschata] >XP_022964633.1 protein CURVATURE THYLAKOID 1C, chloroplastic [Cucurbita moschata] >XP_023515295.1 protein CURVATURE THYLAKOID 1C, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023515296.1 protein CURVATURE THYLAKOID 1C, chloroplastic [Cucurbita pepo subsp. pepo]) HSP 1 Score: 220.3 bits (560), Expect = 1.1e-53 Identity = 119/147 (80.95%), Postives = 128/147 (87.07%), Query Frame = 0
BLAST of Sed0022313 vs. NCBI nr
Match: XP_022144822.1 (protein CURVATURE THYLAKOID 1C, chloroplastic [Momordica charantia]) HSP 1 Score: 217.6 bits (553), Expect = 7.0e-53 Identity = 115/146 (78.77%), Postives = 128/146 (87.67%), Query Frame = 0
BLAST of Sed0022313 vs. ExPASy Swiss-Prot
Match: Q9M812 (Protein CURVATURE THYLAKOID 1C, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CURT1C PE=1 SV=1) HSP 1 Score: 150.6 bits (379), Expect = 1.4e-35 Identity = 77/156 (49.36%), Postives = 106/156 (67.95%), Query Frame = 0
BLAST of Sed0022313 vs. ExPASy Swiss-Prot
Match: Q8LCA1 (Protein CURVATURE THYLAKOID 1B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CURT1B PE=1 SV=2) HSP 1 Score: 89.4 bits (220), Expect = 3.8e-17 Identity = 43/114 (37.72%), Postives = 71/114 (62.28%), Query Frame = 0
BLAST of Sed0022313 vs. ExPASy Swiss-Prot
Match: O04616 (Protein CURVATURE THYLAKOID 1A, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CURT1A PE=1 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 2.8e-12 Identity = 36/101 (35.64%), Postives = 60/101 (59.41%), Query Frame = 0
BLAST of Sed0022313 vs. ExPASy Swiss-Prot
Match: Q119Z5 (Glutamate--tRNA ligase OS=Trichodesmium erythraeum (strain IMS101) OX=203124 GN=gltX PE=3 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 1.3e-06 Identity = 30/85 (35.29%), Postives = 50/85 (58.82%), Query Frame = 0
BLAST of Sed0022313 vs. ExPASy Swiss-Prot
Match: Q8LDD3 (Protein CURVATURE THYLAKOID 1D, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CURT1D PE=1 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 5.1e-06 Identity = 22/66 (33.33%), Postives = 42/66 (63.64%), Query Frame = 0
BLAST of Sed0022313 vs. ExPASy TrEMBL
Match: A0A6J1KFS9 (protein CURVATURE THYLAKOID 1C, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111494666 PE=4 SV=1) HSP 1 Score: 221.9 bits (564), Expect = 1.8e-54 Identity = 117/146 (80.14%), Postives = 127/146 (86.99%), Query Frame = 0
BLAST of Sed0022313 vs. ExPASy TrEMBL
Match: A0A6J1HLG0 (protein CURVATURE THYLAKOID 1C, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111464586 PE=4 SV=1) HSP 1 Score: 220.3 bits (560), Expect = 5.2e-54 Identity = 119/147 (80.95%), Postives = 128/147 (87.07%), Query Frame = 0
BLAST of Sed0022313 vs. ExPASy TrEMBL
Match: A0A6J1CUT1 (protein CURVATURE THYLAKOID 1C, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111014410 PE=4 SV=1) HSP 1 Score: 217.6 bits (553), Expect = 3.4e-53 Identity = 115/146 (78.77%), Postives = 128/146 (87.67%), Query Frame = 0
BLAST of Sed0022313 vs. ExPASy TrEMBL
Match: A0A0A0KC66 (CAAD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G447010 PE=4 SV=1) HSP 1 Score: 215.7 bits (548), Expect = 1.3e-52 Identity = 112/146 (76.71%), Postives = 125/146 (85.62%), Query Frame = 0
BLAST of Sed0022313 vs. ExPASy TrEMBL
Match: A0A5D3BWY3 (Protein CURVATURE THYLAKOID 1C OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G002150 PE=4 SV=1) HSP 1 Score: 214.2 bits (544), Expect = 3.7e-52 Identity = 113/146 (77.40%), Postives = 123/146 (84.25%), Query Frame = 0
BLAST of Sed0022313 vs. TAIR 10
Match: AT1G52220.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: photosystem I P subunit (TAIR:AT2G46820.2); Has 291 Blast hits to 291 proteins in 50 species: Archae - 0; Bacteria - 90; Metazoa - 0; Fungi - 0; Plants - 200; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). ) HSP 1 Score: 150.6 bits (379), Expect = 9.8e-37 Identity = 77/156 (49.36%), Postives = 106/156 (67.95%), Query Frame = 0
BLAST of Sed0022313 vs. TAIR 10
Match: AT1G52220.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: photosystem I P subunit (TAIR:AT2G46820.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 144.4 bits (363), Expect = 7.0e-35 Identity = 76/156 (48.72%), Postives = 105/156 (67.31%), Query Frame = 0
BLAST of Sed0022313 vs. TAIR 10
Match: AT1G52220.3 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: photosystem I P subunit (TAIR:AT2G46820.2); Has 251 Blast hits to 251 proteins in 43 species: Archae - 0; Bacteria - 66; Metazoa - 0; Fungi - 0; Plants - 184; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). ) HSP 1 Score: 98.6 bits (244), Expect = 4.4e-21 Identity = 62/156 (39.74%), Postives = 85/156 (54.49%), Query Frame = 0
BLAST of Sed0022313 vs. TAIR 10
Match: AT2G46820.1 (photosystem I P subunit ) HSP 1 Score: 89.4 bits (220), Expect = 2.7e-18 Identity = 43/114 (37.72%), Postives = 71/114 (62.28%), Query Frame = 0
BLAST of Sed0022313 vs. TAIR 10
Match: AT2G46820.2 (photosystem I P subunit ) HSP 1 Score: 89.4 bits (220), Expect = 2.7e-18 Identity = 43/114 (37.72%), Postives = 71/114 (62.28%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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