Sed0022266 (gene) Chayote v1

Overview


Name	Sed0022266
Type	gene
Organism	Sechium edule (Chayote v1)
Description	WUSCHEL-related homeobox 4-like
Location	LG10: 26171404 .. 26172703 (+)
RNA-Seq Expression	Sed0022266
Synteny	Sed0022266

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACCAGTTGAATTCCCACTTTCTTTTTTCCATTACCTTTTTTCTTGCTTTCATAGTGTGTGTATGTGTGCGCAAAAAAAGGAAAATTTACTTTTAGATGGTGTGTGTATATATGATTCGAGTGTTCCCCATGGGAGTAAAGCATGAAGATTCATCAGTTTGCACGTGGCCTTTGGGAGGAACCCTCTCTCTCCCTCGCTTGCAAGCGCTTACGCCCTATTCCCCCAAACGCCCTTAACAATTCACAACATGATCAACCCACCACTCCACCTACTACCTCTACGCTCACTACTTTCGACCTTAAGACCTTCATCCGCCCCGATTCCGCCCCGAGAAAACTCGACTCTTCGGACCATCACAAACATTCTTCTTCTTCCCAGGTAACTAAACCTACATAGTAATCAATTTACGTACTCATCCTCTTGTCTTTTGAGCTATTAAGGACCCGTGTTGGTTTGTACAGACTCCAGTGGAAACGCACCCTGGAGGCACACGGTGGAATCCGACGCAAGAACAAATAGGCATATTGGAGATGCTCTATAGGAGAGGAATGAGGACTCCCAATGCCCAACAGATTGAACACATCACTTCTCAGCTCTGCAAGTATGGTAAGATTGAAGGCAAGAATGTGTTTTATTGGTTTCAAAACCACAAAGCTCGGGAGCGACAGAAACAAAAGCGCAACAGTCTGGGCCTCGCTCACTCTCCTAGAACACCCCCTCCTCCCATCATCACTGCCTTCTCCTTCCACTCCTCGGTACGAATATAGGTCATATAATTGTTTGAAAACATATCACGTAGTTTTGAATTCATAGATTATGGTATATATTTAATGATGCAGGGAGGGGAAGATAGTCCGTACAAGAGGAAGTGCATGAACTGGGGGTTTGACTGTTTGGTAGAGGATCATGACGATATATTGTGTAAAAATGAGGAAGAAGGAGATAGGACTCTGGAGTTATTCCCCTTGCACCCAGAAGGCAGATGAATTTGCCAATCATGTTTTTGTTTTTGGAAATAATAAAACTAAATTCTCTATTTCCAAAAATAATATTTGCAGCTTTGTATTCGATCATATATATATATATTATATTGTTGTGAAACTGCTTTATTTCTCTTCTTTCTGCGAGTTTCGAGAAAGAAGAAAGCCCCAACAAGAAGGAACAAGTAGCCTCTATCTTTGTACTCATCTCATCTGTGATTTCCAATTCTTTATCTTAATCACTACCTAACTTTGAACACAGACACAAAAGTGGGCTGCCTGCCTAGTTTTTTATTCTCCTTTTTTTAGCCTTATGCCC

mRNA sequence

CACCAGTTGAATTCCCACTTTCTTTTTTCCATTACCTTTTTTCTTGCTTTCATAGTGTGTGTATGTGTGCGCAAAAAAAGGAAAATTTACTTTTAGATGGTGTGTGTATATATGATTCGAGTGTTCCCCATGGGAGTAAAGCATGAAGATTCATCAGTTTGCACGTGGCCTTTGGGAGGAACCCTCTCTCTCCCTCGCTTGCAAGCGCTTACGCCCTATTCCCCCAAACGCCCTTAACAATTCACAACATGATCAACCCACCACTCCACCTACTACCTCTACGCTCACTACTTTCGACCTTAAGACCTTCATCCGCCCCGATTCCGCCCCGAGAAAACTCGACTCTTCGGACCATCACAAACATTCTTCTTCTTCCCAGACTCCAGTGGAAACGCACCCTGGAGGCACACGGTGGAATCCGACGCAAGAACAAATAGGCATATTGGAGATGCTCTATAGGAGAGGAATGAGGACTCCCAATGCCCAACAGATTGAACACATCACTTCTCAGCTCTGCAAGTATGGTAAGATTGAAGGCAAGAATGTGTTTTATTGGTTTCAAAACCACAAAGCTCGGGAGCGACAGAAACAAAAGCGCAACAGTCTGGGCCTCGCTCACTCTCCTAGAACACCCCCTCCTCCCATCATCACTGCCTTCTCCTTCCACTCCTCGGGAGGGGAAGATAGTCCGTACAAGAGGAAGTGCATGAACTGGGGGTTTGACTGTTTGGTAGAGGATCATGACGATATATTGTGTAAAAATGAGGAAGAAGGAGATAGGACTCTGGAGTTATTCCCCTTGCACCCAGAAGGCAGATGAATTTGCCAATCATGTTTTTGTTTTTGGAAATAATAAAACTAAATTCTCTATTTCCAAAAATAATATTTGCAGCTTTGTATTCGATCATATATATATATATTATATTGTTGTGAAACTGCTTTATTTCTCTTCTTTCTGCGAGTTTCGAGAAAGAAGAAAGCCCCAACAAGAAGGAACAAGTAGCCTCTATCTTTGTACTCATCTCATCTGTGATTTCCAATTCTTTATCTTAATCACTACCTAACTTTGAACACAGACACAAAAGTGGGCTGCCTGCCTAGTTTTTTATTCTCCTTTTTTTAGCCTTATGCCC

Coding sequence (CDS)

ATGAAGATTCATCAGTTTGCACGTGGCCTTTGGGAGGAACCCTCTCTCTCCCTCGCTTGCAAGCGCTTACGCCCTATTCCCCCAAACGCCCTTAACAATTCACAACATGATCAACCCACCACTCCACCTACTACCTCTACGCTCACTACTTTCGACCTTAAGACCTTCATCCGCCCCGATTCCGCCCCGAGAAAACTCGACTCTTCGGACCATCACAAACATTCTTCTTCTTCCCAGACTCCAGTGGAAACGCACCCTGGAGGCACACGGTGGAATCCGACGCAAGAACAAATAGGCATATTGGAGATGCTCTATAGGAGAGGAATGAGGACTCCCAATGCCCAACAGATTGAACACATCACTTCTCAGCTCTGCAAGTATGGTAAGATTGAAGGCAAGAATGTGTTTTATTGGTTTCAAAACCACAAAGCTCGGGAGCGACAGAAACAAAAGCGCAACAGTCTGGGCCTCGCTCACTCTCCTAGAACACCCCCTCCTCCCATCATCACTGCCTTCTCCTTCCACTCCTCGGGAGGGGAAGATAGTCCGTACAAGAGGAAGTGCATGAACTGGGGGTTTGACTGTTTGGTAGAGGATCATGACGATATATTGTGTAAAAATGAGGAAGAAGGAGATAGGACTCTGGAGTTATTCCCCTTGCACCCAGAAGGCAGATGA

Protein sequence

MKIHQFARGLWEEPSLSLACKRLRPIPPNALNNSQHDQPTTPPTTSTLTTFDLKTFIRPDSAPRKLDSSDHHKHSSSSQTPVETHPGGTRWNPTQEQIGILEMLYRRGMRTPNAQQIEHITSQLCKYGKIEGKNVFYWFQNHKARERQKQKRNSLGLAHSPRTPPPPIITAFSFHSSGGEDSPYKRKCMNWGFDCLVEDHDDILCKNEEEGDRTLELFPLHPEGR

Homology

[Close]

BLAST of Sed0022266 vs. NCBI nr
Match: KAG7029329.1 (WUSCHEL-related homeobox 4 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 341.7 bits (875), Expect = 4.9e-90
Identity = 176/238 (73.95%), Postives = 190/238 (79.83%), Query Frame = 0


Query: 1   MKIHQFARGLWEEPSLSLACKRLRPIPPNALNNSQH------DQPTTPPTTSTLTTFDLK 60
           MK+HQFARG W+EPSLSL CKRLRP+ P      +H      D  TT  TT+TLTT DLK
Sbjct: 5   MKVHQFARGFWDEPSLSLGCKRLRPLAPKLQQQQRHPSSSSSDHNTT--TTTTLTTLDLK 64

Query: 61  TFIRPDSAPRKLDSS-DHHKHSSSS------QTPVETHPGGTRWNPTQEQIGILEMLYRR 120
           TFIRPD  PRKL SS DH+K SSSS      QT VETHPGGTRWNPTQEQIGILEMLY R
Sbjct: 65  TFIRPDCGPRKLGSSHDHNKGSSSSSSSSSPQTAVETHPGGTRWNPTQEQIGILEMLYSR 124

Query: 121 GMRTPNAQQIEHITSQLCKYGKIEGKNVFYWFQNHKARERQKQKRNSLGLAHSPRTPPPP 180
           GMRTPNAQQIEHIT+QL  YGKIEGKNVFYWFQNHKARERQKQKRNSLGL HSPRTPPPP
Sbjct: 125 GMRTPNAQQIEHITAQLGNYGKIEGKNVFYWFQNHKARERQKQKRNSLGLPHSPRTPPPP 184

Query: 181 IITAFSFHSSGGEDSPYKRKCMNWGFDCLVEDHDDILCKNEEEGDRTLELFPLHPEGR 226
           I+  F     G EDSPYK+KC+ WGF+CLVE H+ ILCK +E+GDRTLELFPLHPEGR
Sbjct: 185 ILPTFHPSFPGEEDSPYKKKCLYWGFECLVE-HNGILCK-KEDGDRTLELFPLHPEGR 238

[Close]

BLAST of Sed0022266 vs. NCBI nr
Match: XP_022962376.1 (WUSCHEL-related homeobox 4-like [Cucurbita moschata])

HSP 1 Score: 341.7 bits (875), Expect = 4.9e-90
Identity = 177/240 (73.75%), Postives = 189/240 (78.75%), Query Frame = 0


Query: 1   MKIHQFARGLWEEPSLSLACKRLRPIPPNALNNSQHDQPTTP--------PTTSTLTTFD 60
           MK+HQFARG W+EPSLSL CKRLRP+ P  L   QH Q   P         TT+TLTT D
Sbjct: 5   MKVHQFARGFWDEPSLSLGCKRLRPLAPK-LQQQQHQQQRHPSSSSSDHNTTTTTLTTLD 64

Query: 61  LKTFIRPDSAPRKLDSS-DHHKHSSSS------QTPVETHPGGTRWNPTQEQIGILEMLY 120
           LKTFIRPD  PRKL SS DH+K SSSS      QT VETHPGGTRWNPTQEQIGILEMLY
Sbjct: 65  LKTFIRPDCGPRKLGSSHDHNKGSSSSSSSSSPQTAVETHPGGTRWNPTQEQIGILEMLY 124

Query: 121 RRGMRTPNAQQIEHITSQLCKYGKIEGKNVFYWFQNHKARERQKQKRNSLGLAHSPRTPP 180
            RGMRTPNAQQIEHIT+QL  YGKIEGKNVFYWFQNHKARERQKQKRNSLGL HSPRTPP
Sbjct: 125 SRGMRTPNAQQIEHITAQLGNYGKIEGKNVFYWFQNHKARERQKQKRNSLGLPHSPRTPP 184

Query: 181 PPIITAFSFHSSGGEDSPYKRKCMNWGFDCLVEDHDDILCKNEEEGDRTLELFPLHPEGR 226
           PPI+  F     G EDSPYK+KC+ WGF+CLVE H+ ILCK  E+GDRTLELFPLHPEGR
Sbjct: 185 PPILPTFHPSFPGEEDSPYKKKCLYWGFECLVE-HNGILCK-REDGDRTLELFPLHPEGR 241

[Close]

BLAST of Sed0022266 vs. NCBI nr
Match: KAG6598358.1 (WUSCHEL-related homeobox 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 340.9 bits (873), Expect = 8.4e-90
Identity = 174/239 (72.80%), Postives = 187/239 (78.24%), Query Frame = 0


Query: 1   MKIHQFARGLWEEPSLSLACKRLRPIPPNALNNSQH-------DQPTTPPTTSTLTTFDL 60
           MK+HQFARG W+EPSLSL CKRLRP+ P      +H       D  TT  TT+TLTT DL
Sbjct: 5   MKVHQFARGFWDEPSLSLGCKRLRPLAPKLQQQQRHPSSSSSSDHNTT--TTTTLTTLDL 64

Query: 61  KTFIRPDSAPRKLDSSDHHKHSSSS-------QTPVETHPGGTRWNPTQEQIGILEMLYR 120
           KTFIRPD  PRKL SS  HK  SSS       QT VETHPGGTRWNPTQEQIGILEMLY 
Sbjct: 65  KTFIRPDCGPRKLGSSHDHKKGSSSSSSSSSPQTAVETHPGGTRWNPTQEQIGILEMLYS 124

Query: 121 RGMRTPNAQQIEHITSQLCKYGKIEGKNVFYWFQNHKARERQKQKRNSLGLAHSPRTPPP 180
           RGMRTPNAQQIEHIT+QL  YGKIEGKNVFYWFQNHKARERQKQKRNSLGL HSPRTPPP
Sbjct: 125 RGMRTPNAQQIEHITAQLGNYGKIEGKNVFYWFQNHKARERQKQKRNSLGLPHSPRTPPP 184

Query: 181 PIITAFSFHSSGGEDSPYKRKCMNWGFDCLVEDHDDILCKNEEEGDRTLELFPLHPEGR 226
           PI+  F     G EDSPYK+KC+ WGF+CLVE H+ ILCK +E+GDRTLELFPLHPEGR
Sbjct: 185 PILPTFHPSFPGEEDSPYKKKCLYWGFECLVE-HNGILCK-KEDGDRTLELFPLHPEGR 239

[Close]

BLAST of Sed0022266 vs. NCBI nr
Match: XP_022997565.1 (WUSCHEL-related homeobox 4-like [Cucurbita maxima])

HSP 1 Score: 339.0 bits (868), Expect = 3.2e-89
Identity = 175/242 (72.31%), Postives = 190/242 (78.51%), Query Frame = 0


Query: 1   MKIHQFARGLWEEPSLSLACKRLRPIPPNALNNSQH-------DQPTTPP---TTSTLTT 60
           MK+HQFARG W+EPSLSL CKRLRP+ P      QH         P++     TT+TLTT
Sbjct: 10  MKVHQFARGFWDEPSLSLGCKRLRPLAPKLQQQQQHHHHQQQQQHPSSSSDHNTTTTLTT 69

Query: 61  FDLKTFIRPDSAPRKLDSS-DHHKHSSSS------QTPVETHPGGTRWNPTQEQIGILEM 120
            DLKTFIRPD  PRKL SS DH+K SSSS      QT VETHPGGTRWNPTQEQIGILEM
Sbjct: 70  LDLKTFIRPDCGPRKLGSSHDHNKGSSSSSSSSSPQTAVETHPGGTRWNPTQEQIGILEM 129

Query: 121 LYRRGMRTPNAQQIEHITSQLCKYGKIEGKNVFYWFQNHKARERQKQKRNSLGLAHSPRT 180
           LY RGMRTPNAQQIEHIT+QL  YGKIEGKNVFYWFQNHKARERQKQKRNSLGL HSPRT
Sbjct: 130 LYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFYWFQNHKARERQKQKRNSLGLPHSPRT 189

Query: 181 PPPPIITAFSFHSSGGEDSPYKRKCMNWGFDCLVEDHDDILCKNEEEGDRTLELFPLHPE 226
           PPPPI+  F     G EDSPYK+KC+ WGF+CLVE H+ ILCK +E+GDRTLELFPLHPE
Sbjct: 190 PPPPILPTFHPSFPGEEDSPYKKKCLYWGFECLVE-HNGILCK-KEDGDRTLELFPLHPE 249

[Close]

BLAST of Sed0022266 vs. NCBI nr
Match: ADN33723.1 (homeodomain transcription factor [Cucumis melo subsp. melo])

HSP 1 Score: 335.9 bits (860), Expect = 2.7e-88
Identity = 174/229 (75.98%), Postives = 186/229 (81.22%), Query Frame = 0


Query: 1   MKIHQFARGLWEEPSLSLACKRLRPIPPNALNNSQHDQPTTPPTTSTLTTFDLKTFIRPD 60
           MK+HQFARG W+EPSLSL CKRLRP+ P  L     D  TT  TT+TLTTFDLKTFI+PD
Sbjct: 1   MKVHQFARGFWDEPSLSLGCKRLRPLAPK-LQQPTSDNTTTTTTTTTLTTFDLKTFIKPD 60

Query: 61  SAPRKLDSS-DHHKHSSSS----QTPVETHPGGTRWNPTQEQIGILEMLYRRGMRTPNAQ 120
             PRK  SS DH K SSSS    QT VETHPGGTRWNPTQEQIGILEMLY RGMRTPNAQ
Sbjct: 61  CGPRKPGSSHDHSKDSSSSSSSLQTGVETHPGGTRWNPTQEQIGILEMLYSRGMRTPNAQ 120

Query: 121 QIEHITSQLCKYGKIEGKNVFYWFQNHKARERQKQKRNSLGLAHSPRT-PPPPIITAFSF 180
           QIEHIT+QL  YGKIEGKNVFYWFQNHKARERQKQKRNSLGL HSPRT PPPPII AF  
Sbjct: 121 QIEHITAQLGNYGKIEGKNVFYWFQNHKARERQKQKRNSLGLPHSPRTPPPPPIIPAF-- 180

Query: 181 HSSGGEDSPYKRKCMNWGFDCLVEDHDDILCKNEEEGDRTLELFPLHPE 224
             +G EDSPYKRKC+ WGF+CLVED + ++CK EE  DRTLELFPLHPE
Sbjct: 181 -HTGDEDSPYKRKCLYWGFECLVED-NGLMCKKEEGHDRTLELFPLHPE 224

[Close]

BLAST of Sed0022266 vs. ExPASy Swiss-Prot
Match: Q6X7J9 (WUSCHEL-related homeobox 4 OS=Arabidopsis thaliana OX=3702 GN=WOX4 PE=1 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 2.3e-53
Identity = 137/262 (52.29%), Postives = 163/262 (62.21%), Query Frame = 0


Query: 1   MKIHQFARGL---WEE----PSLSLACKRLRPIPPNALNNSQHDQPTTPPTTS---TLTT 60
           MK+H+F+ G    W++     SLSL+CKRLRP+ P  L+ S    P +PP++S   T  T
Sbjct: 1   MKVHEFSNGFSSSWDQHDSTSSLSLSCKRLRPLAPK-LSGS----PPSPPSSSSGVTSAT 60

Query: 61  FDLKTFIRPD-SAPRKLDSSDHHKHSSSSQTPVETHPGGTRWNPTQEQIGILEMLYRRGM 120
           FDLK FIRPD + P K +    HK     Q  +ETHPGGTRWNPTQEQIGILEMLY+ GM
Sbjct: 61  FDLKNFIRPDQTGPTKFE----HKRDPPHQ--LETHPGGTRWNPTQEQIGILEMLYKGGM 120

Query: 121 RTPNAQQIEHITSQLCKYGKIEGKNVFYWFQNHKARERQKQKRN---SLGLAHSPRTPP- 180
           RTPNAQQIEHIT QL KYGKIEGKNVFYWFQNHKARERQKQKRN   SL    S  T   
Sbjct: 121 RTPNAQQIEHITLQLGKYGKIEGKNVFYWFQNHKARERQKQKRNNLISLSCQSSFTTTGV 180

Query: 181 -PPIITAFSFHSSG--------------GEDSPYKRKCMNWGFDCL-VEDHDD------I 226
             P +T  +  SS                E++ YKR C +WGF+ L +E+  +       
Sbjct: 181 FNPSVTMKTRTSSSLDIMREPMVEKEELVEENEYKRTCRSWGFENLEIENRRNKNSSTMA 240

[Close]

BLAST of Sed0022266 vs. ExPASy Swiss-Prot
Match: Q25AM2 (WUSCHEL-related homeobox 4 OS=Oryza sativa subsp. indica OX=39946 GN=WOX4 PE=3 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 7.8e-30
Identity = 75/152 (49.34%), Postives = 94/152 (61.84%), Query Frame = 0


Query: 87  GGTRWNPTQEQIGILEMLYRRGMRTPNAQQIEHITSQLCKYGKIEGKNVFYWFQNHKARE 146
           G TRWNP+ EQI +LEMLYR GMRTPN+ QIE IT +L KYG+IEGKNVFYWFQNHKARE
Sbjct: 89  GTTRWNPSAEQIKVLEMLYRGGMRTPNSVQIERITEELGKYGRIEGKNVFYWFQNHKARE 148

Query: 147 RQKQKRNSLGLAHSPRTPPPPIITAFSFHSSGGED----------SPYKRKCMNWGFDCL 206
           RQKQKR +L    +  T  P ++ A +  +    +          +  KR+C  WG    
Sbjct: 149 RQKQKRAAL---LTLSTLDPSLLPATANETKEAPEKKEKDVEDGLASCKRRCKAWGDG-- 208

Query: 207 VEDHDDILCKNEEEG---DRTLELFPLHPEGR 226
             D D ++      G   + TLELFPLHP+G+
Sbjct: 209 AGDGDAVVATEAAGGCTDEVTLELFPLHPQGK 235

[Close]

BLAST of Sed0022266 vs. ExPASy Swiss-Prot
Match: Q7XTV3 (WUSCHEL-related homeobox 4 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX4 PE=2 SV=2)

HSP 1 Score: 132.1 bits (331), Expect = 7.8e-30
Identity = 75/152 (49.34%), Postives = 94/152 (61.84%), Query Frame = 0


Query: 87  GGTRWNPTQEQIGILEMLYRRGMRTPNAQQIEHITSQLCKYGKIEGKNVFYWFQNHKARE 146
           G TRWNP+ EQI +LEMLYR GMRTPN+ QIE IT +L KYG+IEGKNVFYWFQNHKARE
Sbjct: 89  GTTRWNPSAEQIKVLEMLYRGGMRTPNSVQIERITEELGKYGRIEGKNVFYWFQNHKARE 148

Query: 147 RQKQKRNSLGLAHSPRTPPPPIITAFSFHSSGGED----------SPYKRKCMNWGFDCL 206
           RQKQKR +L    +  T  P ++ A +  +    +          +  KR+C  WG    
Sbjct: 149 RQKQKRAAL---LTLSTLDPSLLPATANETKEAPEKKEKDVEDGLASCKRRCKAWGDG-- 208

Query: 207 VEDHDDILCKNEEEG---DRTLELFPLHPEGR 226
             D D ++      G   + TLELFPLHP+G+
Sbjct: 209 AGDGDAVVATEAAGGCTDEVTLELFPLHPQGK 235

[Close]

BLAST of Sed0022266 vs. ExPASy Swiss-Prot
Match: A2WWU7 (WUSCHEL-related homeobox 5 OS=Oryza sativa subsp. indica OX=39946 GN=WOX5 PE=3 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.3e-21
Identity = 48/79 (60.76%), Postives = 61/79 (77.22%), Query Frame = 0


Query: 90  RWNPTQEQIGILEMLYRRGMRTPNAQQIEHITSQLCKYGKIEGKNVFYWFQNHKARERQK 149
           RW PT+EQI +LE LYR+G+RTP A+QI+ IT++L ++G IEGKNVFYWFQNHKAR+RQK
Sbjct: 44  RWTPTKEQIAVLEGLYRQGLRTPTAEQIQQITARLREHGHIEGKNVFYWFQNHKARQRQK 103

Query: 150 QKRNSLGLAHSPRTPPPPI 169
           QK+ S          PPP+
Sbjct: 104 QKQQSFDYFSKLFRRPPPL 122

[Close]

BLAST of Sed0022266 vs. ExPASy Swiss-Prot
Match: Q8LR86 (WUSCHEL-related homeobox 5 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX5 PE=2 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.3e-21
Identity = 48/79 (60.76%), Postives = 61/79 (77.22%), Query Frame = 0


Query: 90  RWNPTQEQIGILEMLYRRGMRTPNAQQIEHITSQLCKYGKIEGKNVFYWFQNHKARERQK 149
           RW PT+EQI +LE LYR+G+RTP A+QI+ IT++L ++G IEGKNVFYWFQNHKAR+RQK
Sbjct: 44  RWTPTKEQIAVLEGLYRQGLRTPTAEQIQQITARLREHGHIEGKNVFYWFQNHKARQRQK 103

Query: 150 QKRNSLGLAHSPRTPPPPI 169
           QK+ S          PPP+
Sbjct: 104 QKQQSFDYFSKLFRRPPPL 122

[Close]

BLAST of Sed0022266 vs. ExPASy TrEMBL
Match: A0A6J1HCY5 (WUSCHEL-related homeobox 4-like OS=Cucurbita moschata OX=3662 GN=LOC111462837 PE=4 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 2.4e-90
Identity = 177/240 (73.75%), Postives = 189/240 (78.75%), Query Frame = 0


Query: 1   MKIHQFARGLWEEPSLSLACKRLRPIPPNALNNSQHDQPTTP--------PTTSTLTTFD 60
           MK+HQFARG W+EPSLSL CKRLRP+ P  L   QH Q   P         TT+TLTT D
Sbjct: 5   MKVHQFARGFWDEPSLSLGCKRLRPLAPK-LQQQQHQQQRHPSSSSSDHNTTTTTLTTLD 64

Query: 61  LKTFIRPDSAPRKLDSS-DHHKHSSSS------QTPVETHPGGTRWNPTQEQIGILEMLY 120
           LKTFIRPD  PRKL SS DH+K SSSS      QT VETHPGGTRWNPTQEQIGILEMLY
Sbjct: 65  LKTFIRPDCGPRKLGSSHDHNKGSSSSSSSSSPQTAVETHPGGTRWNPTQEQIGILEMLY 124

Query: 121 RRGMRTPNAQQIEHITSQLCKYGKIEGKNVFYWFQNHKARERQKQKRNSLGLAHSPRTPP 180
            RGMRTPNAQQIEHIT+QL  YGKIEGKNVFYWFQNHKARERQKQKRNSLGL HSPRTPP
Sbjct: 125 SRGMRTPNAQQIEHITAQLGNYGKIEGKNVFYWFQNHKARERQKQKRNSLGLPHSPRTPP 184

Query: 181 PPIITAFSFHSSGGEDSPYKRKCMNWGFDCLVEDHDDILCKNEEEGDRTLELFPLHPEGR 226
           PPI+  F     G EDSPYK+KC+ WGF+CLVE H+ ILCK  E+GDRTLELFPLHPEGR
Sbjct: 185 PPILPTFHPSFPGEEDSPYKKKCLYWGFECLVE-HNGILCK-REDGDRTLELFPLHPEGR 241

[Close]

BLAST of Sed0022266 vs. ExPASy TrEMBL
Match: A0A6J1KA18 (WUSCHEL-related homeobox 4-like OS=Cucurbita maxima OX=3661 GN=LOC111492455 PE=4 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 1.6e-89
Identity = 175/242 (72.31%), Postives = 190/242 (78.51%), Query Frame = 0


Query: 1   MKIHQFARGLWEEPSLSLACKRLRPIPPNALNNSQH-------DQPTTPP---TTSTLTT 60
           MK+HQFARG W+EPSLSL CKRLRP+ P      QH         P++     TT+TLTT
Sbjct: 10  MKVHQFARGFWDEPSLSLGCKRLRPLAPKLQQQQQHHHHQQQQQHPSSSSDHNTTTTLTT 69

Query: 61  FDLKTFIRPDSAPRKLDSS-DHHKHSSSS------QTPVETHPGGTRWNPTQEQIGILEM 120
            DLKTFIRPD  PRKL SS DH+K SSSS      QT VETHPGGTRWNPTQEQIGILEM
Sbjct: 70  LDLKTFIRPDCGPRKLGSSHDHNKGSSSSSSSSSPQTAVETHPGGTRWNPTQEQIGILEM 129

Query: 121 LYRRGMRTPNAQQIEHITSQLCKYGKIEGKNVFYWFQNHKARERQKQKRNSLGLAHSPRT 180
           LY RGMRTPNAQQIEHIT+QL  YGKIEGKNVFYWFQNHKARERQKQKRNSLGL HSPRT
Sbjct: 130 LYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFYWFQNHKARERQKQKRNSLGLPHSPRT 189

Query: 181 PPPPIITAFSFHSSGGEDSPYKRKCMNWGFDCLVEDHDDILCKNEEEGDRTLELFPLHPE 226
           PPPPI+  F     G EDSPYK+KC+ WGF+CLVE H+ ILCK +E+GDRTLELFPLHPE
Sbjct: 190 PPPPILPTFHPSFPGEEDSPYKKKCLYWGFECLVE-HNGILCK-KEDGDRTLELFPLHPE 249

[Close]

BLAST of Sed0022266 vs. ExPASy TrEMBL
Match: E5GB81 (Homeodomain transcription factor OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 1.3e-88
Identity = 174/229 (75.98%), Postives = 186/229 (81.22%), Query Frame = 0


Query: 1   MKIHQFARGLWEEPSLSLACKRLRPIPPNALNNSQHDQPTTPPTTSTLTTFDLKTFIRPD 60
           MK+HQFARG W+EPSLSL CKRLRP+ P  L     D  TT  TT+TLTTFDLKTFI+PD
Sbjct: 1   MKVHQFARGFWDEPSLSLGCKRLRPLAPK-LQQPTSDNTTTTTTTTTLTTFDLKTFIKPD 60

Query: 61  SAPRKLDSS-DHHKHSSSS----QTPVETHPGGTRWNPTQEQIGILEMLYRRGMRTPNAQ 120
             PRK  SS DH K SSSS    QT VETHPGGTRWNPTQEQIGILEMLY RGMRTPNAQ
Sbjct: 61  CGPRKPGSSHDHSKDSSSSSSSLQTGVETHPGGTRWNPTQEQIGILEMLYSRGMRTPNAQ 120

Query: 121 QIEHITSQLCKYGKIEGKNVFYWFQNHKARERQKQKRNSLGLAHSPRT-PPPPIITAFSF 180
           QIEHIT+QL  YGKIEGKNVFYWFQNHKARERQKQKRNSLGL HSPRT PPPPII AF  
Sbjct: 121 QIEHITAQLGNYGKIEGKNVFYWFQNHKARERQKQKRNSLGLPHSPRTPPPPPIIPAF-- 180

Query: 181 HSSGGEDSPYKRKCMNWGFDCLVEDHDDILCKNEEEGDRTLELFPLHPE 224
             +G EDSPYKRKC+ WGF+CLVED + ++CK EE  DRTLELFPLHPE
Sbjct: 181 -HTGDEDSPYKRKCLYWGFECLVED-NGLMCKKEEGHDRTLELFPLHPE 224

[Close]

BLAST of Sed0022266 vs. ExPASy TrEMBL
Match: A0A1S3BBG0 (WUSCHEL-related homeobox 4 OS=Cucumis melo OX=3656 GN=LOC103487871 PE=4 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 1.3e-88
Identity = 174/229 (75.98%), Postives = 186/229 (81.22%), Query Frame = 0


Query: 1   MKIHQFARGLWEEPSLSLACKRLRPIPPNALNNSQHDQPTTPPTTSTLTTFDLKTFIRPD 60
           MK+HQFARG W+EPSLSL CKRLRP+ P  L     D  TT  TT+TLTTFDLKTFI+PD
Sbjct: 5   MKVHQFARGFWDEPSLSLGCKRLRPLAPK-LQQPTSDNTTTTTTTTTLTTFDLKTFIKPD 64

Query: 61  SAPRKLDSS-DHHKHSSSS----QTPVETHPGGTRWNPTQEQIGILEMLYRRGMRTPNAQ 120
             PRK  SS DH K SSSS    QT VETHPGGTRWNPTQEQIGILEMLY RGMRTPNAQ
Sbjct: 65  CGPRKPGSSHDHSKDSSSSSSSLQTGVETHPGGTRWNPTQEQIGILEMLYSRGMRTPNAQ 124

Query: 121 QIEHITSQLCKYGKIEGKNVFYWFQNHKARERQKQKRNSLGLAHSPRT-PPPPIITAFSF 180
           QIEHIT+QL  YGKIEGKNVFYWFQNHKARERQKQKRNSLGL HSPRT PPPPII AF  
Sbjct: 125 QIEHITAQLGNYGKIEGKNVFYWFQNHKARERQKQKRNSLGLPHSPRTPPPPPIIPAF-- 184

Query: 181 HSSGGEDSPYKRKCMNWGFDCLVEDHDDILCKNEEEGDRTLELFPLHPE 224
             +G EDSPYKRKC+ WGF+CLVED + ++CK EE  DRTLELFPLHPE
Sbjct: 185 -HTGDEDSPYKRKCLYWGFECLVED-NGLMCKKEEGHDRTLELFPLHPE 228

[Close]

BLAST of Sed0022266 vs. ExPASy TrEMBL
Match: A0A6J1BTE7 (WUSCHEL-related homeobox 4 OS=Momordica charantia OX=3673 GN=LOC111004657 PE=4 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 2.2e-88
Identity = 174/229 (75.98%), Postives = 185/229 (80.79%), Query Frame = 0


Query: 1   MKIHQFARGLWE--EPSLSLACKRLRPIPPNALNNSQHDQPTTPPTTSTLTTFDLKTFIR 60
           MK+HQFARG WE  EPSL+L CKRLRP+ P        D  T   TT+TLTTFDLKTFIR
Sbjct: 5   MKVHQFARGFWEAHEPSLTLGCKRLRPLAPKLQQPPTSDLTTAATTTTTLTTFDLKTFIR 64

Query: 61  PDSAPRKL-DSSDHHKHSSSSQTP-VETHPGGTRWNPTQEQIGILEMLYRRGMRTPNAQQ 120
           PD  PRKL  SSDH+K SSSS +P VETHPGGTRWNPTQEQIGILE LYRRGMRTPNAQQ
Sbjct: 65  PDCGPRKLGSSSDHNKDSSSSSSPQVETHPGGTRWNPTQEQIGILETLYRRGMRTPNAQQ 124

Query: 121 IEHITSQLCKYGKIEGKNVFYWFQNHKARERQKQKRNSLGLAHSPRTPPPPIITAFSFHS 180
           IEHIT+QL  YGKIEGKNVFYWFQNHKARERQKQKRNSLGL H+PRTP  PI     FHS
Sbjct: 125 IEHITAQLGNYGKIEGKNVFYWFQNHKARERQKQKRNSLGLTHTPRTPSNPI----PFHS 184

Query: 181 SGGEDSPYKRKCMNWGFDCLVEDHDDILCKNEEEGDRTLELFPLHPEGR 226
              EDSPYKRKC +WGF+CLVED   ILCK +EEGDRTLELFPLHPEGR
Sbjct: 185 QEEEDSPYKRKCRSWGFECLVED-SGILCK-KEEGDRTLELFPLHPEGR 227

[Close]

BLAST of Sed0022266 vs. TAIR 10
Match: AT1G46480.1 (WUSCHEL related homeobox 4 )

HSP 1 Score: 210.3 bits (534), Expect = 1.6e-54
Identity = 137/262 (52.29%), Postives = 163/262 (62.21%), Query Frame = 0


Query: 1   MKIHQFARGL---WEE----PSLSLACKRLRPIPPNALNNSQHDQPTTPPTTS---TLTT 60
           MK+H+F+ G    W++     SLSL+CKRLRP+ P  L+ S    P +PP++S   T  T
Sbjct: 1   MKVHEFSNGFSSSWDQHDSTSSLSLSCKRLRPLAPK-LSGS----PPSPPSSSSGVTSAT 60

Query: 61  FDLKTFIRPD-SAPRKLDSSDHHKHSSSSQTPVETHPGGTRWNPTQEQIGILEMLYRRGM 120
           FDLK FIRPD + P K +    HK     Q  +ETHPGGTRWNPTQEQIGILEMLY+ GM
Sbjct: 61  FDLKNFIRPDQTGPTKFE----HKRDPPHQ--LETHPGGTRWNPTQEQIGILEMLYKGGM 120

Query: 121 RTPNAQQIEHITSQLCKYGKIEGKNVFYWFQNHKARERQKQKRN---SLGLAHSPRTPP- 180
           RTPNAQQIEHIT QL KYGKIEGKNVFYWFQNHKARERQKQKRN   SL    S  T   
Sbjct: 121 RTPNAQQIEHITLQLGKYGKIEGKNVFYWFQNHKARERQKQKRNNLISLSCQSSFTTTGV 180

Query: 181 -PPIITAFSFHSSG--------------GEDSPYKRKCMNWGFDCL-VEDHDD------I 226
             P +T  +  SS                E++ YKR C +WGF+ L +E+  +       
Sbjct: 181 FNPSVTMKTRTSSSLDIMREPMVEKEELVEENEYKRTCRSWGFENLEIENRRNKNSSTMA 240

[Close]

BLAST of Sed0022266 vs. TAIR 10
Match: AT3G18010.1 (WUSCHEL related homeobox 1 )

HSP 1 Score: 102.8 bits (255), Expect = 3.6e-22
Identity = 45/64 (70.31%), Postives = 56/64 (87.50%), Query Frame = 0


Query: 89  TRWNPTQEQIGILEMLYRRGMRTPNAQQIEHITSQLCKYGKIEGKNVFYWFQNHKARERQ 148
           +RWNPT +Q+ +LE LYR+G RTP+A  I+ IT+QL +YGKIEGKNVFYWFQNHKARERQ
Sbjct: 75  SRWNPTPDQLRVLEELYRQGTRTPSADHIQQITAQLRRYGKIEGKNVFYWFQNHKARERQ 134

Query: 149 KQKR 153
           K++R
Sbjct: 135 KRRR 138

[Close]

BLAST of Sed0022266 vs. TAIR 10
Match: AT5G59340.1 (WUSCHEL related homeobox 2 )

HSP 1 Score: 100.5 bits (249), Expect = 1.8e-21
Identity = 44/67 (65.67%), Postives = 56/67 (83.58%), Query Frame = 0


Query: 89  TRWNPTQEQIGILEMLYRRGMRTPNAQQIEHITSQLCKYGKIEGKNVFYWFQNHKARERQ 148
           +RWNPT++QI +LE LY+ G+RTP+A QI+ IT +L  YG IEGKNVFYWFQNHKAR+RQ
Sbjct: 13  SRWNPTKDQITLLENLYKEGIRTPSADQIQQITGRLRAYGHIEGKNVFYWFQNHKARQRQ 72

Query: 149 KQKRNSL 156
           KQK+  +
Sbjct: 73  KQKQERM 79

[Close]

BLAST of Sed0022266 vs. TAIR 10
Match: AT2G01500.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 99.0 bits (245), Expect = 5.2e-21
Identity = 52/104 (50.00%), Postives = 66/104 (63.46%), Query Frame = 0


Query: 66  LDSSDHHK--HSSSSQTPVETHPGG------TRWNPTQEQIGILEMLYRRGMRTPNAQQI 125
           ++ +DHH+   +SS +  ++            RWNPT EQI  LE LYR G RTP  +QI
Sbjct: 29  INGNDHHQLITASSGEHDIDERKNNIPAAATLRWNPTPEQITTLEELYRSGTRTPTTEQI 88

Query: 126 EHITSQLCKYGKIEGKNVFYWFQNHKARERQKQKRNSLGLAHSP 162
           + I S+L KYG+IEGKNVFYWFQNHKARER K++R   G    P
Sbjct: 89  QQIASKLRKYGRIEGKNVFYWFQNHKARERLKRRRREGGAIIKP 132

[Close]

BLAST of Sed0022266 vs. TAIR 10
Match: AT2G28610.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 97.1 bits (240), Expect = 2.0e-20
Identity = 44/64 (68.75%), Postives = 53/64 (82.81%), Query Frame = 0


Query: 89  TRWNPTQEQIGILEMLYRRGMRTPNAQQIEHITSQLCKYGKIEGKNVFYWFQNHKARERQ 148
           TRW PT EQ+ ILE +YR G+RTPNA QI+ IT+ L  YG+IEGKNVFYWFQNHKAR+RQ
Sbjct: 7   TRWCPTPEQLMILEEMYRSGIRTPNAVQIQQITAHLAFYGRIEGKNVFYWFQNHKARDRQ 66

Query: 149 KQKR 153
           K ++
Sbjct: 67  KLRK 70

The following BLAST results are available for this feature:

BLAST of Sed0022266 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7029329.1	4.9e-90	73.95	WUSCHEL-related homeobox 4 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022962376.1	4.9e-90	73.75	WUSCHEL-related homeobox 4-like [Cucurbita moschata]	[more]
KAG6598358.1	8.4e-90	72.80	WUSCHEL-related homeobox 4, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022997565.1	3.2e-89	72.31	WUSCHEL-related homeobox 4-like [Cucurbita maxima]	[more]
ADN33723.1	2.7e-88	75.98	homeodomain transcription factor [Cucumis melo subsp. melo]	[more]

BLAST of Sed0022266 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6X7J9	2.3e-53	52.29	WUSCHEL-related homeobox 4 OS=Arabidopsis thaliana OX=3702 GN=WOX4 PE=1 SV=1	[more]
Q25AM2	7.8e-30	49.34	WUSCHEL-related homeobox 4 OS=Oryza sativa subsp. indica OX=39946 GN=WOX4 PE=3 S...	[more]
Q7XTV3	7.8e-30	49.34	WUSCHEL-related homeobox 4 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX4 PE=2...	[more]
A2WWU7	1.3e-21	60.76	WUSCHEL-related homeobox 5 OS=Oryza sativa subsp. indica OX=39946 GN=WOX5 PE=3 S...	[more]
Q8LR86	1.3e-21	60.76	WUSCHEL-related homeobox 5 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX5 PE=2...	[more]

BLAST of Sed0022266 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HCY5	2.4e-90	73.75	WUSCHEL-related homeobox 4-like OS=Cucurbita moschata OX=3662 GN=LOC111462837 PE...	[more]
A0A6J1KA18	1.6e-89	72.31	WUSCHEL-related homeobox 4-like OS=Cucurbita maxima OX=3661 GN=LOC111492455 PE=4...	[more]
E5GB81	1.3e-88	75.98	Homeodomain transcription factor OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A1S3BBG0	1.3e-88	75.98	WUSCHEL-related homeobox 4 OS=Cucumis melo OX=3656 GN=LOC103487871 PE=4 SV=1	[more]
A0A6J1BTE7	2.2e-88	75.98	WUSCHEL-related homeobox 4 OS=Momordica charantia OX=3673 GN=LOC111004657 PE=4 S...	[more]

BLAST of Sed0022266 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G46480.1	1.6e-54	52.29	WUSCHEL related homeobox 4	[more]
AT3G18010.1	3.6e-22	70.31	WUSCHEL related homeobox 1	[more]
AT5G59340.1	1.8e-21	65.67	WUSCHEL related homeobox 2	[more]
AT2G01500.1	5.2e-21	50.00	Homeodomain-like superfamily protein	[more]
AT2G28610.1	2.0e-20	68.75	Homeodomain-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 86..153 e-value: 1.9E-5 score: 34.1
IPR001356	Homeobox domain	PFAM	PF00046	Homeodomain	coord: 89..148 e-value: 8.3E-19 score: 67.2
IPR001356	Homeobox domain	PROSITE	PS50071	HOMEOBOX_2	coord: 84..149 score: 10.365416
IPR001356	Homeobox domain	CDD	cd00086	homeodomain	coord: 89..150 e-value: 2.35053E-5 score: 39.1489
None	No IPR available	GENE3D	1.10.10.60		coord: 88..155 e-value: 2.0E-9 score: 39.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 60..94
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..48
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..48
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 79..94
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 60..78
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 147..167
IPR044186	WUSCHEL-related homeobox 4	PANTHER	PTHR47716	WUSCHEL-RELATED HOMEOBOX 4	coord: 1..225
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 84..154

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0022266.1	Sed0022266.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051301	cell division
biological_process	GO:0010087	phloem or xylem histogenesis
biological_process	GO:0010067	procambium histogenesis
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity