Sed0022265 (gene) Chayote v1

Overview


Name	Sed0022265
Type	gene
Organism	Sechium edule (Chayote v1)
Description	ribosomal RNA large subunit methyltransferase E-like
Location	LG01: 22064695 .. 22066096 (-)
RNA-Seq Expression	Sed0022265
Synteny	Sed0022265

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTGGAGCAGGAGCACCCGATTTCTTCTACAGAGAAGCTCAACGCCTTGGCTATGTCGCAAGATCCGCCTTCAAGGTATCCATCCAACCATAAAAAAGACCCACAATTCATTCCTTCCTCTTTCTTACTTAACCAACCAGATCTCTTTTCTCCGACAGTTGCTTCAGATTCAGACCCAATTCAAATTGATCACTTCAGGCTCCTCCGTTTTGGACCTTGGCTGCGCTCCCGGTGCCTGGCTTCAGGTCTCCATTTCCCCCTCTCTAACTTCTTCTTTTCTCCTCTTTTCTCCTATGCCATTCTTTTGTATCAGGTTGCTTGTCAGAGTCTGGGGCCTCTCAACAATGGAGGCTCTGTTCTGGGTATTGATCTCAAGGTGTGTGTGTGTGTGTCTGTGTCAACTGTTTTGCTTCTATCTTCCTTCTGGGTTACTTAGTTTCATAAAAACAAATGTGGGTCTGGTCTTGTCTTGCAGAACAGAAGGTTAAGGTTCCTCATGTCTATTGTGATTCAAGGGTGAAAACTGTTTGTGCTGATGCTACGAAACTTCCCATAAATCAATTGAAGGCTCTATCTCCCAAGGTAACTTCTTTACTCCTTTCTTTTTTTTTATCCATGTCTATGTCACTGAATGCTGTACATACAACTTCTATCATTCTGCTAGGTTTCGGCATTTAGAGGAATTAGGAACAATCTAGAGAGAGGGGATATATGCGCAATTTGTTAGAGAATCATGGTTATAATAAGTAAGAGGGAATTGGGTAGTGAAAGACATCTCCAAATATTGAGTATAGGAGAGGGTTCCAAGTCCTATTAAAAATTGGTTATTTTGTAGTTGCTTTATGTTTTGATTGATCTTGGATCCTTTGATGGCTCCATACACTTTAAATCTAAATACTGTTTCTTGCTTGGTTCTTTAGGGGAAAGGATTTTCTGTAATACTCTCCGATATGTGCCCCTCGGTTTCGGGTATCACCTCTAGAGATGCAGCTTTATCCGTTGAATTAGGGATGCAAGCAGTCACTTTGGCTCTCGGAGAAGCTGCGTTAGGTCTTGGAGATGATGCTATGCATGGAAAGGAGAAGGAAAATGTGGATGATTCAACCTCAGTTACAGATTATGATGGTGTGCTTAGAAAAGAAGGCCATCTCGTTATAAAATTCTTGGAGAGTGAAGATACAAAAGGTAGAATTTTATTTTTATATAATTTTCAAGGGAGGGTGTATTTTTGGTCTGCCATTATATTCCTTTATTTTTTATCCCAGAATTCACCCGGATGTTGAAGCCGCTCTTCAGAAAGGCAACCTGGTTGAGGCCTAAGGCTACTAGATCGTCATCAAGAGAGATTTATCTGATATGTAAAAGCTTGCAGGCAAGAACATATACAACTAGAGTATGA

mRNA sequence

ATGAGTGGAGCAGGAGCACCCGATTTCTTCTACAGAGAAGCTCAACGCCTTGGCTATGTCGCAAGATCCGCCTTCAAGTTGCTTCAGATTCAGACCCAATTCAAATTGATCACTTCAGGCTCCTCCGTTTTGGACCTTGGCTGCGCTCCCGGTGCCTGGCTTCAGGTTGCTTGTCAGAGTCTGGGGCCTCTCAACAATGGAGGCTCTGTTCTGGGTATTGATCTCAAGAAGGTTAAGGTTCCTCATGTCTATTGTGATTCAAGGGTGAAAACTGTTTGTGCTGATGCTACGAAACTTCCCATAAATCAATTGAAGGCTCTATCTCCCAAGGGGAAAGGATTTTCTGTAATACTCTCCGATATGTGCCCCTCGGTTTCGGGTATCACCTCTAGAGATGCAGCTTTATCCGTTGAATTAGGGATGCAAGCAGTCACTTTGGCTCTCGGAGAAGCTGCGTTAGGTCTTGGAGATGATGCTATGCATGGAAAGGAGAAGGAAAATGTGGATGATTCAACCTCAGTTACAGATTATGATGGTGTGCTTAGAAAAGAAGGCCATCTCGTTATAAAATTCTTGGAGAGTGAAGATACAAAAGAATTCACCCGGATGTTGAAGCCGCTCTTCAGAAAGGCAACCTGGTTGAGGCCTAAGGCTACTAGATCGTCATCAAGAGAGATTTATCTGATATGTAAAAGCTTGCAGGCAAGAACATATACAACTAGAGTATGA

Coding sequence (CDS)

ATGAGTGGAGCAGGAGCACCCGATTTCTTCTACAGAGAAGCTCAACGCCTTGGCTATGTCGCAAGATCCGCCTTCAAGTTGCTTCAGATTCAGACCCAATTCAAATTGATCACTTCAGGCTCCTCCGTTTTGGACCTTGGCTGCGCTCCCGGTGCCTGGCTTCAGGTTGCTTGTCAGAGTCTGGGGCCTCTCAACAATGGAGGCTCTGTTCTGGGTATTGATCTCAAGAAGGTTAAGGTTCCTCATGTCTATTGTGATTCAAGGGTGAAAACTGTTTGTGCTGATGCTACGAAACTTCCCATAAATCAATTGAAGGCTCTATCTCCCAAGGGGAAAGGATTTTCTGTAATACTCTCCGATATGTGCCCCTCGGTTTCGGGTATCACCTCTAGAGATGCAGCTTTATCCGTTGAATTAGGGATGCAAGCAGTCACTTTGGCTCTCGGAGAAGCTGCGTTAGGTCTTGGAGATGATGCTATGCATGGAAAGGAGAAGGAAAATGTGGATGATTCAACCTCAGTTACAGATTATGATGGTGTGCTTAGAAAAGAAGGCCATCTCGTTATAAAATTCTTGGAGAGTGAAGATACAAAAGAATTCACCCGGATGTTGAAGCCGCTCTTCAGAAAGGCAACCTGGTTGAGGCCTAAGGCTACTAGATCGTCATCAAGAGAGATTTATCTGATATGTAAAAGCTTGCAGGCAAGAACATATACAACTAGAGTATGA

Protein sequence

MSGAGAPDFFYREAQRLGYVARSAFKLLQIQTQFKLITSGSSVLDLGCAPGAWLQVACQSLGPLNNGGSVLGIDLKKVKVPHVYCDSRVKTVCADATKLPINQLKALSPKGKGFSVILSDMCPSVSGITSRDAALSVELGMQAVTLALGEAALGLGDDAMHGKEKENVDDSTSVTDYDGVLRKEGHLVIKFLESEDTKEFTRMLKPLFRKATWLRPKATRSSSREIYLICKSLQARTYTTRV

Homology

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BLAST of Sed0022265 vs. NCBI nr
Match: XP_023543349.1 (uncharacterized protein LOC111802921 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 408.7 bits (1049), Expect = 3.5e-110
Identity = 209/238 (87.82%), Postives = 222/238 (93.28%), Query Frame = 0


Query: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQTQFKLITSGSSVLDLGCAPGAWLQVACQS 60
           MSGAGAPDFFYREAQRLGYVARSAFKLLQIQ QFKLITSGSSVLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQKQFKLITSGSSVLDLGCAPGAWLQVACQS 60

Query: 61  LGPLNNGGSVLGIDLKKVKVPHVYCDSRVKTVCADATKLPINQLKALSPKGKGFSVILSD 120
           LGPL NGGSV+GIDLKKVKVPHV+CDSRV+TVCAD   LP N+LKALSPK KGFSVILSD
Sbjct: 61  LGPLKNGGSVVGIDLKKVKVPHVHCDSRVQTVCADVMNLPKNKLKALSPKEKGFSVILSD 120

Query: 121 MCPSVSGITSRDAALSVELGMQAVTLALGEAALGLGDDAMHGKEKE-NVDDSTSVTDYDG 180
           MCPSVSGIT+RDA+LSVELGMQAV LALGEAAL  GDD MHGK KE NVDDS SV+DYDG
Sbjct: 121 MCPSVSGITTRDASLSVELGMQAVNLALGEAALSHGDDVMHGKNKEDNVDDSASVSDYDG 180

Query: 181 VLRKEGHLVIKFLESEDTKEFTRMLKPLFRKATWLRPKATRSSSREIYLICKSLQART 238
           VL+K GHLVIK LESEDT+EF+RMLKPLFRKA+WLRPKATRSSSREIYLIC+SLQA+T
Sbjct: 181 VLQKGGHLVIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSLQAKT 238

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BLAST of Sed0022265 vs. NCBI nr
Match: KAG6602386.1 (hypothetical protein SDJN03_07619, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 405.6 bits (1041), Expect = 3.0e-109
Identity = 207/238 (86.97%), Postives = 221/238 (92.86%), Query Frame = 0


Query: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQTQFKLITSGSSVLDLGCAPGAWLQVACQS 60
           MSGAGAPDFFYREAQRLGYVARSAFKLLQIQ QFKLITSGSSVLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQKQFKLITSGSSVLDLGCAPGAWLQVACQS 60

Query: 61  LGPLNNGGSVLGIDLKKVKVPHVYCDSRVKTVCADATKLPINQLKALSPKGKGFSVILSD 120
           LGPL NGGSV+GIDLKKVKVPHV+CDSRV+TVCAD   LP N+LKALSPK KGFSVILSD
Sbjct: 61  LGPLKNGGSVVGIDLKKVKVPHVHCDSRVQTVCADVMNLPKNKLKALSPKEKGFSVILSD 120

Query: 121 MCPSVSGITSRDAALSVELGMQAVTLALGEAALGLGDDAMHGKEKE-NVDDSTSVTDYDG 180
           MCP VSGIT+RDA+LSVELGMQAV LALGEAAL  GDD MHGK KE NVDDS SV+DYDG
Sbjct: 121 MCPMVSGITTRDASLSVELGMQAVNLALGEAALSHGDDVMHGKNKEDNVDDSASVSDYDG 180

Query: 181 VLRKEGHLVIKFLESEDTKEFTRMLKPLFRKATWLRPKATRSSSREIYLICKSLQART 238
           +L+K GHLVIK LESEDT+EF+RMLKPLFRKA+WLRPKATRSSSREIYLIC+SLQA+T
Sbjct: 181 LLQKGGHLVIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSLQAKT 238

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BLAST of Sed0022265 vs. NCBI nr
Match: XP_022960605.1 (uncharacterized protein LOC111461336 [Cucurbita moschata])

HSP 1 Score: 404.1 bits (1037), Expect = 8.7e-109
Identity = 207/238 (86.97%), Postives = 220/238 (92.44%), Query Frame = 0


Query: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQTQFKLITSGSSVLDLGCAPGAWLQVACQS 60
           MSGAGAPDFFYREAQRLGYVARSAFKLLQIQ QFKLITSGSSVLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQKQFKLITSGSSVLDLGCAPGAWLQVACQS 60

Query: 61  LGPLNNGGSVLGIDLKKVKVPHVYCDSRVKTVCADATKLPINQLKALSPKGKGFSVILSD 120
           LGPL NGGSV+GIDLKKVKVPHV+CDSRV+TVCAD   LP N+LKALSPK KGFSVILSD
Sbjct: 61  LGPLKNGGSVVGIDLKKVKVPHVHCDSRVQTVCADVMNLPKNKLKALSPKEKGFSVILSD 120

Query: 121 MCPSVSGITSRDAALSVELGMQAVTLALGEAALGLGDDAMHGKEKE-NVDDSTSVTDYDG 180
           MCP VSGIT+RDA+LSVELGMQAV LALGEAAL  GDD MHGK KE NVDDS  V+DYDG
Sbjct: 121 MCPLVSGITTRDASLSVELGMQAVNLALGEAALSHGDDVMHGKNKEDNVDDSALVSDYDG 180

Query: 181 VLRKEGHLVIKFLESEDTKEFTRMLKPLFRKATWLRPKATRSSSREIYLICKSLQART 238
           VL+K GHLVIK LESEDT+EF+RMLKPLFRKA+WLRPKATRSSSREIYLIC+SLQA+T
Sbjct: 181 VLQKGGHLVIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSLQAKT 238

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BLAST of Sed0022265 vs. NCBI nr
Match: XP_022990132.1 (uncharacterized protein LOC111487116 [Cucurbita maxima])

HSP 1 Score: 400.6 bits (1028), Expect = 9.7e-108
Identity = 207/239 (86.61%), Postives = 220/239 (92.05%), Query Frame = 0


Query: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQTQFKLITSGSSVLDLGCAPGAWLQVACQS 60
           MSGAGAPDFFYREAQRLGYVARSAFKLLQIQ QFKLITSGSSVLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQKQFKLITSGSSVLDLGCAPGAWLQVACQS 60

Query: 61  LGPLNNGGSVLGIDLKKVKVPHVYCDSRVKTVCADATKLPINQLKALSPKGKGFSVILSD 120
           LGPL NGGSV+GIDLKKVKVPHVYCDSRV+TVCAD   LP N+LKALSPK KGFSVILSD
Sbjct: 61  LGPLKNGGSVVGIDLKKVKVPHVYCDSRVQTVCADVMNLPKNKLKALSPKEKGFSVILSD 120

Query: 121 MCPSVSGITSRDAALSVELGMQAVTLALGEAA-LGLGDDAMHGKEKE-NVDDSTSVTDYD 180
           MCP VSGIT+RDA+LSVELGMQAV +ALGEAA L  GDD MHGK KE NVDDS  V+DYD
Sbjct: 121 MCPLVSGITTRDASLSVELGMQAVNMALGEAALLSHGDDVMHGKNKEDNVDDSALVSDYD 180

Query: 181 GVLRKEGHLVIKFLESEDTKEFTRMLKPLFRKATWLRPKATRSSSREIYLICKSLQART 238
           GVL+K GHLVIK LESEDT+EF+RMLKPLFRKA+WLRPKATRSSSREIYLIC+SLQA+T
Sbjct: 181 GVLQKGGHLVIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSLQAKT 239

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BLAST of Sed0022265 vs. NCBI nr
Match: XP_022134055.1 (uncharacterized protein LOC111006421 isoform X1 [Momordica charantia])

HSP 1 Score: 397.9 bits (1021), Expect = 6.3e-107
Identity = 202/236 (85.59%), Postives = 218/236 (92.37%), Query Frame = 0


Query: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQTQFKLITSGSSVLDLGCAPGAWLQVACQS 60
           MSGAG PDFFYREAQRLGYVARSAFKLLQIQ QFKLITSGSSVLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGTPDFFYREAQRLGYVARSAFKLLQIQKQFKLITSGSSVLDLGCAPGAWLQVACQS 60

Query: 61  LGPLNNGGSVLGIDLKKVKVPHVYCDSRVKTVCADATKLPINQLKALSPKGKGFSVILSD 120
           LGPL NGGSVLGIDLKKVKVPHV+CDSRV+TV AD   LP N+LKALSPK +GFSVILSD
Sbjct: 61  LGPLKNGGSVLGIDLKKVKVPHVHCDSRVQTVSADVMNLPRNKLKALSPKERGFSVILSD 120

Query: 121 MCPSVSGITSRDAALSVELGMQAVTLALGEAALGLGDDAMHGKEKENVDDSTSVTDYDGV 180
           MCPSVSGIT+RDA LSVELGMQAV LA+GEAALG GDD MHG  K++VDDSTSV DYDG+
Sbjct: 121 MCPSVSGITTRDATLSVELGMQAVNLAIGEAALGSGDDVMHG--KDSVDDSTSVVDYDGL 180

Query: 181 LRKEGHLVIKFLESEDTKEFTRMLKPLFRKATWLRPKATRSSSREIYLICKSLQAR 237
           L++ GHLV+K LESEDT+EF+RMLKPLFRKA+WLRPKATRSSSREIYLIC+SLQAR
Sbjct: 181 LQRGGHLVVKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSLQAR 234

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BLAST of Sed0022265 vs. ExPASy Swiss-Prot
Match: B8FL12 (Ribosomal RNA large subunit methyltransferase E OS=Desulfatibacillum aliphaticivorans OX=218208 GN=rlmE PE=3 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 3.8e-22
Identity = 76/222 (34.23%), Postives = 114/222 (51.35%), Query Frame = 0


Query: 8   DFFYREAQRLGYVARSAFKLLQIQTQFKLITSGSSVLDLGCAPGAWLQVACQSLGPLNNG 67
           D +  +AQ+ G+ ARS FKL ++Q ++K++  G  VLDLGCAPG+WL+ A Q +G   + 
Sbjct: 13  DHYTDKAQKAGFPARSVFKLEEMQKRWKILRPGQKVLDLGCAPGSWLKYASQIVG---DS 72

Query: 68  GSVLGIDLKKVKVPHVYCDSRVKTVCADATKLPINQLKALSPKGKGFSVILSDMCPSVSG 127
           G V+G+DLK +  P        + +  DA +L    L  +   G+ F V+LSDM P+ +G
Sbjct: 73  GRVIGLDLKPMDQPD---KPNAQFIQGDAFELTQEFLDEI---GRDFDVVLSDMAPNTTG 132

Query: 128 ITSRDAALSVELGMQAVTLALGEAALGLGDDAMHGKEKENVDDSTSVTDYDGVLRKEGHL 187
           I + DA  S          AL E+AL                 + +VT    VL+  G  
Sbjct: 133 IKNVDALKSA---------ALCESAL-----------------AAAVT----VLKPGGSF 192

Query: 188 VIKFLESEDTKEFTRMLKPLFRKATWLRPKATRSSSREIYLI 230
           V K  + E    F + +K  F K    +P++TR  SREIY++
Sbjct: 193 VCKIFQGEGFDAFIKDVKKYFTKHKIFKPESTRKQSREIYVV 195

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BLAST of Sed0022265 vs. ExPASy Swiss-Prot
Match: A6UUK5 (Ribosomal RNA large subunit methyltransferase E OS=Methanococcus aeolicus (strain ATCC BAA-1280 / DSM 17508 / OCM 812 / Nankai-3) OX=419665 GN=rlmE PE=3 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 3.8e-22
Identity = 69/232 (29.74%), Postives = 117/232 (50.43%), Query Frame = 0


Query: 8   DFFYREAQRLGYVARSAFKLLQIQTQFKLITSGSSVLDLGCAPGAWLQVACQSLGPLNNG 67
           DF+Y+ A++  Y +R+++KLLQ+  +F++I  G +V+DLGCAPG WLQ +   +G     
Sbjct: 15  DFYYKLAKQNHYRSRASYKLLQLNEKFEIIYEGDNVVDLGCAPGGWLQASYDLVG---ED 74

Query: 68  GSVLGIDLKKVKVPHVYCDSRVKTVCADATKL-PINQLKALSPKGKGFSVILSDMCPSVS 127
           G V+G+DL+KVK      +  +  +  D TK   IN++  L P      V++ D  P++S
Sbjct: 75  GFVIGVDLQKVKPLR---EENIVAIQGDMTKKETINKIIDLMPSKA--DVVICDASPNIS 134

Query: 128 GITSRDAALSVELGMQAVTLALGEAALGLGDDAMHGKEKENVDDSTSVTDYDGVLRKEGH 187
           G+   D + S+EL + A+                                   +LRK G+
Sbjct: 135 GVWEVDHSRSIELSLMALIAT------------------------------THLLRKNGN 194

Query: 188 LVIKFLESEDTKEFTRMLKPLFRKATWLRPKATRSSSREIYLICKSLQARTY 239
            V+K  +     ++ ++L   F+K    +PKA+RS S E+Y+I K    + +
Sbjct: 195 FVVKVFQGSLFDQYVQLLTKYFKKVQTTKPKASRSVSAEVYVIGKKFLGKKF 208

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BLAST of Sed0022265 vs. ExPASy Swiss-Prot
Match: Q58771 (Ribosomal RNA large subunit methyltransferase E OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=rlmE PE=3 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 6.4e-22
Identity = 72/226 (31.86%), Postives = 117/226 (51.77%), Query Frame = 0


Query: 8   DFFYREAQRLGYVARSAFKLLQIQTQFKLITSGSSVLDLGCAPGAWLQVACQSLGPLNNG 67
           DF+Y+ A++L Y +R++FKL+Q+  +F +I  G  VLDLGCAPG W+QVA + +G   + 
Sbjct: 15  DFYYKLAKKLKYRSRASFKLMQLNEKFNVIKPGKIVLDLGCAPGGWMQVAREIVG---DK 74

Query: 68  GSVLGIDLKKVKVPHVYCDSRVKTVCADAT-KLPINQLKALSPKG-KGFSVILSDMCPSV 127
           G V+GIDL+ VK P  Y    V  +  D T +  +N+++ L P   K   V++SD  P++
Sbjct: 75  GFVIGIDLQPVK-PFEY--DNVVAIKGDFTLEENLNKIRELIPNDEKKVDVVISDASPNI 134

Query: 128 SGITSRDAALSVELGMQAVTLALGEAALGLGDDAMHGKEKENVDDSTSVTDYDGVLRKEG 187
           SG    D A S++L   A+ +A                                +L++ G
Sbjct: 135 SGYWDIDHARSIDLVTTALQIA------------------------------TEMLKERG 194

Query: 188 HLVIKFLESEDTKEFTRMLKPLFRKATWLRPKATRSSSREIYLICK 232
           + V K    +   ++  ++K  F K    +P+A+R  S E+Y+I K
Sbjct: 195 NFVAKVFYGDMIDDYVNLVKKYFEKVYITKPQASRKESAEVYVIAK 204

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BLAST of Sed0022265 vs. ExPASy Swiss-Prot
Match: B9LSX2 (Ribosomal RNA large subunit methyltransferase E OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) OX=416348 GN=rlmE PE=3 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 4.2e-21
Identity = 70/226 (30.97%), Postives = 109/226 (48.23%), Query Frame = 0


Query: 8   DFFYREAQRLGYVARSAFKLLQIQTQFKLITSGSSVLDLGCAPGAWLQVACQSLGPLNNG 67
           D +Y ++++ GY ARSA+KL QI  +  L   G +V+DLG APG WLQVA + +G     
Sbjct: 5   DEYYNKSKQQGYRARSAYKLKQIDEEANLFERGDTVVDLGAAPGGWLQVAAEEVG---ES 64

Query: 68  GSVLGIDLKKVKVPHVYCDSRVKTVCADATKLPINQLKALSPKGKGFSVILSDMCPSVSG 127
           G+V+G+DL+++       D  V+T+  D T+         +   +G  V++SDM P+++G
Sbjct: 65  GTVVGVDLQRI---DDLDDHDVETIRGDMTEERTRHYLREAIGERGADVVISDMAPNMTG 124

Query: 128 ITSRDAALSVELGMQAVTLALGEAALGLGDDAMHGKEKENVDDSTSVTDYDGVLRKEGHL 187
             + D A SV L  QA  +A                              + +L   G  
Sbjct: 125 EYALDHARSVHLARQAFDVA------------------------------EELLAPGGDF 184

Query: 188 VIKFLESEDTKEFTRMLKPLFRKATWLRPKATRSSSREIYLICKSL 234
           V+K  + ED   F   ++  F     + P A+R SS E+YL+ K L
Sbjct: 185 VVKVFQGEDLDAFREDVRAEFEYLRTVSPPASRDSSSEVYLVAKGL 194

[Close]

BLAST of Sed0022265 vs. ExPASy Swiss-Prot
Match: Q466Q1 (Ribosomal RNA large subunit methyltransferase E OS=Methanosarcina barkeri (strain Fusaro / DSM 804) OX=269797 GN=rlmE PE=3 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 4.2e-21
Identity = 73/224 (32.59%), Postives = 115/224 (51.34%), Query Frame = 0


Query: 8   DFFYREAQRLGYVARSAFKLLQIQTQFKLITSGSSVLDLGCAPGAWLQVACQSLGPLNNG 67
           D++YR+A+  GY +R++FKL QI  +  +I  G SV+DLG APG WLQVA +      +G
Sbjct: 7   DYYYRQAKEEGYRSRASFKLKQINERHHIINRGDSVVDLGAAPGGWLQVAKEL-----SG 66

Query: 68  GSVLGIDLKKVKVPHVYCDSRVKTVCADATKLPINQLKALSPKGKGFSVILSDMCPSVSG 127
           G VLG+DL+++ VP    ++    + AD+T   I  +K +    KG  V+L D  P++SG
Sbjct: 67  GKVLGVDLQRI-VPIEGVETIQGNINADSTIQKI--IKTVG--AKGADVVLCDAAPNLSG 126

Query: 128 ITSRDAALSVELGMQAVTLALGEAALGLGDDAMHGKEKENVDDSTSVTDYDGVLRKEGHL 187
             S D A S+EL   A+  A                                +L+ +G+ 
Sbjct: 127 NWSYDHARSIELATSALECA------------------------------KKILKPKGNF 186

Query: 188 VIKFLESEDTKEFTRMLKPLFRKATWLRPKATRSSSREIYLICK 232
           V+K  + +   ++ + ++  F +     PKA+RS S EIY+I K
Sbjct: 187 VVKVFQGDMFNDYMQKVRDNFVRTMAYSPKASRSQSAEIYVIGK 190

[Close]

BLAST of Sed0022265 vs. ExPASy TrEMBL
Match: A0A6J1H9J8 (uncharacterized protein LOC111461336 OS=Cucurbita moschata OX=3662 GN=LOC111461336 PE=3 SV=1)

HSP 1 Score: 404.1 bits (1037), Expect = 4.2e-109
Identity = 207/238 (86.97%), Postives = 220/238 (92.44%), Query Frame = 0


Query: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQTQFKLITSGSSVLDLGCAPGAWLQVACQS 60
           MSGAGAPDFFYREAQRLGYVARSAFKLLQIQ QFKLITSGSSVLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQKQFKLITSGSSVLDLGCAPGAWLQVACQS 60

Query: 61  LGPLNNGGSVLGIDLKKVKVPHVYCDSRVKTVCADATKLPINQLKALSPKGKGFSVILSD 120
           LGPL NGGSV+GIDLKKVKVPHV+CDSRV+TVCAD   LP N+LKALSPK KGFSVILSD
Sbjct: 61  LGPLKNGGSVVGIDLKKVKVPHVHCDSRVQTVCADVMNLPKNKLKALSPKEKGFSVILSD 120

Query: 121 MCPSVSGITSRDAALSVELGMQAVTLALGEAALGLGDDAMHGKEKE-NVDDSTSVTDYDG 180
           MCP VSGIT+RDA+LSVELGMQAV LALGEAAL  GDD MHGK KE NVDDS  V+DYDG
Sbjct: 121 MCPLVSGITTRDASLSVELGMQAVNLALGEAALSHGDDVMHGKNKEDNVDDSALVSDYDG 180

Query: 181 VLRKEGHLVIKFLESEDTKEFTRMLKPLFRKATWLRPKATRSSSREIYLICKSLQART 238
           VL+K GHLVIK LESEDT+EF+RMLKPLFRKA+WLRPKATRSSSREIYLIC+SLQA+T
Sbjct: 181 VLQKGGHLVIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSLQAKT 238

[Close]

BLAST of Sed0022265 vs. ExPASy TrEMBL
Match: A0A6J1JHT1 (uncharacterized protein LOC111487116 OS=Cucurbita maxima OX=3661 GN=LOC111487116 PE=3 SV=1)

HSP 1 Score: 400.6 bits (1028), Expect = 4.7e-108
Identity = 207/239 (86.61%), Postives = 220/239 (92.05%), Query Frame = 0


Query: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQTQFKLITSGSSVLDLGCAPGAWLQVACQS 60
           MSGAGAPDFFYREAQRLGYVARSAFKLLQIQ QFKLITSGSSVLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQKQFKLITSGSSVLDLGCAPGAWLQVACQS 60

Query: 61  LGPLNNGGSVLGIDLKKVKVPHVYCDSRVKTVCADATKLPINQLKALSPKGKGFSVILSD 120
           LGPL NGGSV+GIDLKKVKVPHVYCDSRV+TVCAD   LP N+LKALSPK KGFSVILSD
Sbjct: 61  LGPLKNGGSVVGIDLKKVKVPHVYCDSRVQTVCADVMNLPKNKLKALSPKEKGFSVILSD 120

Query: 121 MCPSVSGITSRDAALSVELGMQAVTLALGEAA-LGLGDDAMHGKEKE-NVDDSTSVTDYD 180
           MCP VSGIT+RDA+LSVELGMQAV +ALGEAA L  GDD MHGK KE NVDDS  V+DYD
Sbjct: 121 MCPLVSGITTRDASLSVELGMQAVNMALGEAALLSHGDDVMHGKNKEDNVDDSALVSDYD 180

Query: 181 GVLRKEGHLVIKFLESEDTKEFTRMLKPLFRKATWLRPKATRSSSREIYLICKSLQART 238
           GVL+K GHLVIK LESEDT+EF+RMLKPLFRKA+WLRPKATRSSSREIYLIC+SLQA+T
Sbjct: 181 GVLQKGGHLVIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSLQAKT 239

[Close]

BLAST of Sed0022265 vs. ExPASy TrEMBL
Match: A0A6J1BWZ2 (uncharacterized protein LOC111006421 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111006421 PE=3 SV=1)

HSP 1 Score: 397.9 bits (1021), Expect = 3.0e-107
Identity = 202/236 (85.59%), Postives = 218/236 (92.37%), Query Frame = 0


Query: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQTQFKLITSGSSVLDLGCAPGAWLQVACQS 60
           MSGAG PDFFYREAQRLGYVARSAFKLLQIQ QFKLITSGSSVLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGTPDFFYREAQRLGYVARSAFKLLQIQKQFKLITSGSSVLDLGCAPGAWLQVACQS 60

Query: 61  LGPLNNGGSVLGIDLKKVKVPHVYCDSRVKTVCADATKLPINQLKALSPKGKGFSVILSD 120
           LGPL NGGSVLGIDLKKVKVPHV+CDSRV+TV AD   LP N+LKALSPK +GFSVILSD
Sbjct: 61  LGPLKNGGSVLGIDLKKVKVPHVHCDSRVQTVSADVMNLPRNKLKALSPKERGFSVILSD 120

Query: 121 MCPSVSGITSRDAALSVELGMQAVTLALGEAALGLGDDAMHGKEKENVDDSTSVTDYDGV 180
           MCPSVSGIT+RDA LSVELGMQAV LA+GEAALG GDD MHG  K++VDDSTSV DYDG+
Sbjct: 121 MCPSVSGITTRDATLSVELGMQAVNLAIGEAALGSGDDVMHG--KDSVDDSTSVVDYDGL 180

Query: 181 LRKEGHLVIKFLESEDTKEFTRMLKPLFRKATWLRPKATRSSSREIYLICKSLQAR 237
           L++ GHLV+K LESEDT+EF+RMLKPLFRKA+WLRPKATRSSSREIYLIC+SLQAR
Sbjct: 181 LQRGGHLVVKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSLQAR 234

[Close]

BLAST of Sed0022265 vs. ExPASy TrEMBL
Match: A0A1S3C9F1 (ribosomal RNA large subunit methyltransferase E isoform X3 OS=Cucumis melo OX=3656 GN=LOC103498139 PE=3 SV=1)

HSP 1 Score: 391.7 bits (1005), Expect = 2.2e-105
Identity = 198/239 (82.85%), Postives = 220/239 (92.05%), Query Frame = 0


Query: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQTQFKLITSGSSVLDLGCAPGAWLQVACQS 60
           MSGAGAPDFFYREAQRLGYVARSAFKLLQIQ QFKLITSGSSVLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS 60

Query: 61  LGPLNNGGSVLGIDLKKVKVPHVYCDSRVKTVCADATKLPINQLKALSPKGKGFSVILSD 120
           LGP  NGGSVLGID+KKVKVPHV+CDSRV+TVCAD   LP ++LK+LSPK KGFSVILSD
Sbjct: 61  LGPPRNGGSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPKSKLKSLSPKEKGFSVILSD 120

Query: 121 MCPSVSGITSRDAALSVELGMQAVTLALGEAALGLGDDAMHGKEKENVDDSTSVTDYDGV 180
           MCP VSGIT+RDAALSVELGMQAV LALGEAALG+G + +HGK+K+++DDSTS +D DGV
Sbjct: 121 MCPIVSGITTRDAALSVELGMQAVNLALGEAALGVG-EVIHGKDKDSIDDSTSASDCDGV 180

Query: 181 LRKEGHLVIKFLESEDTKEFTRMLKPLFRKATWLRPKATRSSSREIYLICKSLQARTYT 240
           LRK GHLV+K LESEDT+EF+RMLKPLFRK++WLRPKATRSSSREIYLIC+SLQ +  T
Sbjct: 181 LRKGGHLVLKLLESEDTQEFSRMLKPLFRKSSWLRPKATRSSSREIYLICQSLQLQART 238

[Close]

BLAST of Sed0022265 vs. ExPASy TrEMBL
Match: A0A0A0KQZ0 (FtsJ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G517710 PE=3 SV=1)

HSP 1 Score: 387.9 bits (995), Expect = 3.1e-104
Identity = 200/239 (83.68%), Postives = 220/239 (92.05%), Query Frame = 0


Query: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQTQFKLITSGSSVLDLGCAPGAWLQVACQS 60
           MSGAGAPDFFYREAQRLGYVARSAFKLLQIQ QFKLITSGSSVLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS 60

Query: 61  LGPLNNGGSVLGIDLKKVKVPHVYCDSRVKTVCADATKLPINQLKALSPKGKGFSVILSD 120
           LGP  NGGSVLGID+KKVKVPH++CDSRV+TV AD   LP ++LK+LSPK KGFSVILSD
Sbjct: 61  LGPPRNGGSVLGIDIKKVKVPHMHCDSRVQTVSADVMNLPKSKLKSLSPKEKGFSVILSD 120

Query: 121 MCPSVSGITSRDAALSVELGMQAVTLALGEAALGLGDDAMHGKEKENVDDSTSVTDYDGV 180
           MCP VSGIT+RDAALSVELGMQAV LALGEAALG+G D +HGK+K++VDDSTS +D DGV
Sbjct: 121 MCPLVSGITTRDAALSVELGMQAVNLALGEAALGVG-DVIHGKDKDSVDDSTSASDCDGV 180

Query: 181 LRKEGHLVIKFLESEDTKEFTRMLKPLFRKATWLRPKATRSSSREIYLICKS--LQART 238
           LR+ GHLV+K LESEDT+EF+RMLKPLFRKA+WLRPKATRSSSREIYLIC+S  LQART
Sbjct: 181 LRQGGHLVLKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSLHLQART 238

[Close]

BLAST of Sed0022265 vs. TAIR 10
Match: AT5G13830.1 (FtsJ-like methyltransferase family protein )

HSP 1 Score: 298.1 bits (762), Expect = 6.3e-81
Identity = 156/234 (66.67%), Postives = 181/234 (77.35%), Query Frame = 0


Query: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQTQFKLITSGSSVLDLGCAPGAWLQVACQS 60
           MSGAG PDFFYREAQRLGYVARSAFKLLQIQ Q+KLI  GSSVLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGVPDFFYREAQRLGYVARSAFKLLQIQKQYKLIKPGSSVLDLGCAPGAWLQVACQS 60

Query: 61  LGPLNNGGSVLGIDLKKVKVPHVYCDSRVKTVCADATKLPINQLKALSPKGKGFSVILSD 120
           LGPL +GG V+G+D+KKVKVP   CDSRV+T+ AD    P  +++ LSP+  GFSVILSD
Sbjct: 61  LGPLRSGGIVVGMDIKKVKVP-PQCDSRVQTIAADVLNFPRQKIRELSPQQLGFSVILSD 120

Query: 121 MCPSVSGITSRDAALSVELGMQAVTLALGEAALGLGDDAMHGKEKENVDDSTSVTDYDGV 180
           MC SVSGIT+RDAALS ELGM+A+ LA+G+AA+          +  N DD        GV
Sbjct: 121 MCHSVSGITTRDAALSAELGMRALDLAVGQAAI---------SQSPNDDDGGPNESRPGV 180

Query: 181 LRKEGHLVIKFLESEDTKEFTRMLKPLFRKATWLRPKATRSSSREIYLICKSLQ 235
           LR  GHLVIK LESED ++F R+ KP+F KA+WLRPKATR SSREIYLIC+  +
Sbjct: 181 LRHGGHLVIKLLESEDAQDFARICKPIFNKASWLRPKATRPSSREIYLICQGFR 224

[Close]

BLAST of Sed0022265 vs. TAIR 10
Match: AT4G25730.1 (FtsJ-like methyltransferase family protein )

HSP 1 Score: 84.7 bits (208), Expect = 1.1e-16
Identity = 68/223 (30.49%), Postives = 108/223 (48.43%), Query Frame = 0


Query: 8   DFFYREAQRLGYVARSAFKLLQIQTQFKLITSGSSVLDLGCAPGAWLQVACQSLGPLNNG 67
           D +YR A+  G+ +R+++KLLQ+  ++ L+ S  +VLDL  APG W+QVA + + P+  G
Sbjct: 11  DKYYRLAKERGFRSRASYKLLQLDAKYSLLHSAHAVLDLCAAPGGWMQVAVEKV-PV--G 70

Query: 68  GSVLGIDLKKVKVPHVYCDSRVKTVCADATKLPINQLKALSPKG-KGFSVILSDMCPSVS 127
             VLGIDL  + +P   C +  + +     K  I Q+  +   G   F+++L D  P+V 
Sbjct: 71  SLVLGIDLVPI-LPVRGCVTMTQDITRTECKSKIKQV--MEQHGVSAFNLVLHDGSPNVG 130

Query: 128 GITSRDAALSVELGMQAVTLALGEAALGLGDDAMHGKEKENVDDSTSVTDYDGVLRKEGH 187
           G  +++A     L + +V LA                           T++   L + G+
Sbjct: 131 GAWAQEAMSQNALVIDSVRLA---------------------------TEF---LARNGN 190

Query: 188 LVIKFLESEDTKEFTRMLKPLFRKATWLRPKATRSSSREIYLI 230
           LV K   S D       L  LF K    +P A+RS+S E YL+
Sbjct: 191 LVTKVFRSRDYNSVLYCLGRLFEKVEVFKPPASRSASAETYLV 197

[Close]

BLAST of Sed0022265 vs. TAIR 10
Match: AT5G01230.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein )

HSP 1 Score: 70.1 bits (170), Expect = 2.8e-12
Identity = 56/229 (24.45%), Postives = 97/229 (42.36%), Query Frame = 0


Query: 8   DFFYREAQRLGYVARSAFKLLQIQTQFKLITSGSSVLDLGCAPGAWLQVACQSLG-PLNN 67
           D +YR+A+  G+ ARSAFKLLQI  +F +      V+DL  APG+W QV  + L  P  +
Sbjct: 10  DIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRQLYLPAKS 69

Query: 68  GGSVLGIDLKKVKVPHVYCDSRVKTVC---ADATKLPINQLKALSPKGKGFSVILSDMCP 127
                  DL  +    +   + ++ V     D T     ++      G    +++ D  P
Sbjct: 70  SAESKDGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAP 129

Query: 128 SVSGITSRDAALSVELGMQAVTLALGEAALGLGDDAMHGKEKENVDDSTSVTDYDGVLRK 187
            V+G+   D  +  +L +  +T+                                 +L++
Sbjct: 130 DVTGLHDMDEFVQSQLILAGLTIV------------------------------THILKE 189

Query: 188 EGHLVIKFLESEDTKEFTRMLKPLFRKATWLRPKATRSSSREIYLICKS 233
            G  + K    +DT      LK  F   T+ +PK++R+SS E + +C++
Sbjct: 190 GGKFIAKIFRGKDTSLLYCQLKLFFPTVTFAKPKSSRNSSIEAFAVCEN 208

[Close]

BLAST of Sed0022265 vs. TAIR 10
Match: AT5G01230.2 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein )

HSP 1 Score: 51.6 bits (122), Expect = 1.0e-06
Identity = 24/48 (50.00%), Postives = 32/48 (66.67%), Query Frame = 0


Query: 8  DFFYREAQRLGYVARSAFKLLQIQTQFKLITSGSSVLDLGCAPGAWLQ 56
          D +YR+A+  G+ ARSAFKLLQI  +F +      V+DL  APG+W Q
Sbjct: 10 DIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQ 57

The following BLAST results are available for this feature:

BLAST of Sed0022265 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023543349.1	3.5e-110	87.82	uncharacterized protein LOC111802921 [Cucurbita pepo subsp. pepo]	[more]
KAG6602386.1	3.0e-109	86.97	hypothetical protein SDJN03_07619, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022960605.1	8.7e-109	86.97	uncharacterized protein LOC111461336 [Cucurbita moschata]	[more]
XP_022990132.1	9.7e-108	86.61	uncharacterized protein LOC111487116 [Cucurbita maxima]	[more]
XP_022134055.1	6.3e-107	85.59	uncharacterized protein LOC111006421 isoform X1 [Momordica charantia]	[more]

BLAST of Sed0022265 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B8FL12	3.8e-22	34.23	Ribosomal RNA large subunit methyltransferase E OS=Desulfatibacillum aliphaticiv...	[more]
A6UUK5	3.8e-22	29.74	Ribosomal RNA large subunit methyltransferase E OS=Methanococcus aeolicus (strai...	[more]
Q58771	6.4e-22	31.86	Ribosomal RNA large subunit methyltransferase E OS=Methanocaldococcus jannaschii...	[more]
B9LSX2	4.2e-21	30.97	Ribosomal RNA large subunit methyltransferase E OS=Halorubrum lacusprofundi (str...	[more]
Q466Q1	4.2e-21	32.59	Ribosomal RNA large subunit methyltransferase E OS=Methanosarcina barkeri (strai...	[more]

BLAST of Sed0022265 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H9J8	4.2e-109	86.97	uncharacterized protein LOC111461336 OS=Cucurbita moschata OX=3662 GN=LOC1114613...	[more]
A0A6J1JHT1	4.7e-108	86.61	uncharacterized protein LOC111487116 OS=Cucurbita maxima OX=3661 GN=LOC111487116...	[more]
A0A6J1BWZ2	3.0e-107	85.59	uncharacterized protein LOC111006421 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A1S3C9F1	2.2e-105	82.85	ribosomal RNA large subunit methyltransferase E isoform X3 OS=Cucumis melo OX=36...	[more]
A0A0A0KQZ0	3.1e-104	83.68	FtsJ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G517710 PE=3 S...	[more]

BLAST of Sed0022265 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G13830.1	6.3e-81	66.67	FtsJ-like methyltransferase family protein	[more]
AT4G25730.1	1.1e-16	30.49	FtsJ-like methyltransferase family protein	[more]
AT5G01230.1	2.8e-12	24.45	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein	[more]
AT5G01230.2	1.0e-06	50.00	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015507	Ribosomal RNA large subunit methyltransferase E	PIRSF	PIRSF005461	23S_rRNA_mtase	coord: 167..242 e-value: 8.9E-12 score: 42.8 coord: 3..156 e-value: 9.8E-35 score: 117.9
IPR015507	Ribosomal RNA large subunit methyltransferase E	HAMAP	MF_01547	RNA_methyltr_E	coord: 3..234 score: 28.093552
None	No IPR available	GENE3D	3.40.50.150	Vaccinia Virus protein VP39	coord: 15..240 e-value: 3.5E-52 score: 178.9
None	No IPR available	PANTHER	PTHR10920:SF18	RRNA METHYLTRANSFERASE 2, MITOCHONDRIAL	coord: 5..234
None	No IPR available	PANTHER	PTHR10920	RIBOSOMAL RNA METHYLTRANSFERASE	coord: 5..234
None	No IPR available	CDD	cd02440	AdoMet_MTases	coord: 43..122 e-value: 0.0051144 score: 33.9427
IPR002877	Ribosomal RNA methyltransferase FtsJ domain	PFAM	PF01728	FtsJ	coord: 19..231 e-value: 1.3E-44 score: 152.4
IPR029063	S-adenosyl-L-methionine-dependent methyltransferase	SUPERFAMILY	53335	S-adenosyl-L-methionine-dependent methyltransferases	coord: 8..234

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0022265.1	Sed0022265.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031167	rRNA methylation
biological_process	GO:0032259	methylation
biological_process	GO:0001510	RNA methylation
molecular_function	GO:0008650	rRNA (uridine-2'-O-)-methyltransferase activity
molecular_function	GO:0008168	methyltransferase activity