Sed0022231 (gene) Chayote v1

Overview


Name	Sed0022231
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Chlorophyll a-b binding protein, chloroplastic
Location	LG10: 35350636 .. 35351874 (+)
RNA-Seq Expression	Sed0022231
Synteny	Sed0022231

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGCAACTTCTGGTGCTCTGCTTAATGGATTAGGCTCATCTTTCCTCTGTGGAGGTACCAGAAGCCAGACATTGCTGGCTGGAGCCAGAGGCAGCGTCAATGTCATCGGTGGCTCTCGCAAACTTGTCATTGTCGCTGCTGCTTCCGCCAAGAAGTCTTGGCTCCCTGGTGTTAGGAGTGGCGGCAACCTCGTCGACCCCGAATGGCTCGATGGCTCGTATGTCTCTCTTACCTTTTTCACCAAAATTTCAGTTACTGCTTTGAACCTGCTGCTAGAAGAGGCATTTCATCAAACACTCAATTATTTCAGTAATTACTGTTTCAGTTTAGAAGAGGCATTTTATTGCACTTTCTAAGCATTAAATCACACTTTGTTGTAAGTTATTCTTGTTTAGAACATGGTAATCAAACACTTTTTAAGCAATTAGTGTCTAAAATCTGGTATATGCATTTCATCCAACACTCTCCAAGCAATTACTGTTTACAATCTAGTATATGCATTTGATCAAACATTTTCTAAGCAATTAGTGTCTAAAATCTGGCTTAGGCATTTCATTGAACACGTTCATAGCAGTAACTCATCAAAAACATAGAAGAGGCAAATTTTATCAAACACTTCCTAAGCTAATCAAAGTTTCATAACTCTAGATAAGGAATTAAGCAAGTACCTGTTTCGTTTGTATAGACTTCCAGGCGACTACGGCTTCGACCCCCTGGGATTAGGGAAGGACCCAGCATTTCTGAAGTGGTACAGGGAAGCAGAGCTAATCCACGGCCGGTGGGCAATGGCAGCCGTGTTGGGAATCTTTGTTGGCCAGGCCTGGAGTGGTATCCCATGGTTTGAAGCCGGAGCCGATCCATCCGCAATCGCTCCATTCTCCTTCGGATCACTGCTCGGAACCCAGCTTCTGCTAATGGGATGGGTCGAAAGCAAGCGATGGGTGGATTTCTTCAACCCAGAGTCTCAATCCGTGGAATGGGCGACGCCATGGTCGAGAACGGCAGAGAACTTCGCAAACTCAACCGGAGAACAAGGGTACCCTGGAGGAAAATTCTTTGATCCGTTGGGATTTGCAGGAAGTTTGAAGGATGGAGAGTACATTCCGGACACGGAGAAGTTGGAGAGATTGAAGTTGGCAGAGATTAAGCATGCTAGAATTGCCATGTTAGCAATGCTCACCTTCTACTTTGAAGCTGGACAGGGTAAGACGCCGTTGGGTGCTCTTGGATTGTAA

mRNA sequence

ATGGCTGCAACTTCTGGTGCTCTGCTTAATGGATTAGGCTCATCTTTCCTCTGTGGAGGTACCAGAAGCCAGACATTGCTGGCTGGAGCCAGAGGCAGCGTCAATGTCATCGGTGGCTCTCGCAAACTTGTCATTGTCGCTGCTGCTTCCGCCAAGAAGTCTTGGCTCCCTGGTGTTAGGAGTGGCGGCAACCTCGTCGACCCCGAATGGCTCGATGGCTCACTTCCAGGCGACTACGGCTTCGACCCCCTGGGATTAGGGAAGGACCCAGCATTTCTGAAGTGGTACAGGGAAGCAGAGCTAATCCACGGCCGGTGGGCAATGGCAGCCGTGTTGGGAATCTTTGTTGGCCAGGCCTGGAGTGGTATCCCATGGTTTGAAGCCGGAGCCGATCCATCCGCAATCGCTCCATTCTCCTTCGGATCACTGCTCGGAACCCAGCTTCTGCTAATGGGATGGGTCGAAAGCAAGCGATGGGTGGATTTCTTCAACCCAGAGTCTCAATCCGTGGAATGGGCGACGCCATGGTCGAGAACGGCAGAGAACTTCGCAAACTCAACCGGAGAACAAGGGTACCCTGGAGGAAAATTCTTTGATCCGTTGGGATTTGCAGGAAGTTTGAAGGATGGAGAGTACATTCCGGACACGGAGAAGTTGGAGAGATTGAAGTTGGCAGAGATTAAGCATGCTAGAATTGCCATGTTAGCAATGCTCACCTTCTACTTTGAAGCTGGACAGGGTAAGACGCCGTTGGGTGCTCTTGGATTGTAA

Coding sequence (CDS)

ATGGCTGCAACTTCTGGTGCTCTGCTTAATGGATTAGGCTCATCTTTCCTCTGTGGAGGTACCAGAAGCCAGACATTGCTGGCTGGAGCCAGAGGCAGCGTCAATGTCATCGGTGGCTCTCGCAAACTTGTCATTGTCGCTGCTGCTTCCGCCAAGAAGTCTTGGCTCCCTGGTGTTAGGAGTGGCGGCAACCTCGTCGACCCCGAATGGCTCGATGGCTCACTTCCAGGCGACTACGGCTTCGACCCCCTGGGATTAGGGAAGGACCCAGCATTTCTGAAGTGGTACAGGGAAGCAGAGCTAATCCACGGCCGGTGGGCAATGGCAGCCGTGTTGGGAATCTTTGTTGGCCAGGCCTGGAGTGGTATCCCATGGTTTGAAGCCGGAGCCGATCCATCCGCAATCGCTCCATTCTCCTTCGGATCACTGCTCGGAACCCAGCTTCTGCTAATGGGATGGGTCGAAAGCAAGCGATGGGTGGATTTCTTCAACCCAGAGTCTCAATCCGTGGAATGGGCGACGCCATGGTCGAGAACGGCAGAGAACTTCGCAAACTCAACCGGAGAACAAGGGTACCCTGGAGGAAAATTCTTTGATCCGTTGGGATTTGCAGGAAGTTTGAAGGATGGAGAGTACATTCCGGACACGGAGAAGTTGGAGAGATTGAAGTTGGCAGAGATTAAGCATGCTAGAATTGCCATGTTAGCAATGCTCACCTTCTACTTTGAAGCTGGACAGGGTAAGACGCCGTTGGGTGCTCTTGGATTGTAA

Protein sequence

MAATSGALLNGLGSSFLCGGTRSQTLLAGARGSVNVIGGSRKLVIVAAASAKKSWLPGVRSGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWSGIPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANSTGEQGYPGGKFFDPLGFAGSLKDGEYIPDTEKLERLKLAEIKHARIAMLAMLTFYFEAGQGKTPLGALGL

Homology

[Close]

BLAST of Sed0022231 vs. NCBI nr
Match: XP_022988907.1 (chlorophyll a-b binding protein CP24 10A, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 482.3 bits (1240), Expect = 2.7e-132
Identity = 234/256 (91.41%), Postives = 244/256 (95.31%), Query Frame = 0


Query: 1   MAATSGALLNGLGSSFLCGGTRSQTLLAGARGSVNVIGGSRKLVIVAAASAKKSWLPGVR 60
           MAATSGALLNGLGS FL GG+R+QTLLAGARG VNV+  SRKLVIVAAA  KKSW+P V+
Sbjct: 1   MAATSGALLNGLGSPFLHGGSRTQTLLAGARGGVNVV-SSRKLVIVAAAQPKKSWIPAVK 60

Query: 61  SGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAW 120
            GGN +DPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV+GIF+GQAW
Sbjct: 61  GGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFIGQAW 120

Query: 121 SGIPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTA 180
           SGIPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTA
Sbjct: 121 SGIPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTA 180

Query: 181 ENFANSTGEQGYPGGKFFDPLGFAGSLKDGEYIPDTEKLERLKLAEIKHARIAMLAMLTF 240
           ENFAN+TGEQGYPGGKFFDPLGFAG+LKDG YIPDTEKLERLKLAEIKHARIAMLAML F
Sbjct: 181 ENFANATGEQGYPGGKFFDPLGFAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIF 240

Query: 241 YFEAGQGKTPLGALGL 257
           YFEAGQGKTPLGALGL
Sbjct: 241 YFEAGQGKTPLGALGL 255

[Close]

BLAST of Sed0022231 vs. NCBI nr
Match: XP_038885126.1 (chlorophyll a-b binding protein CP24 10A, chloroplastic [Benincasa hispida])

HSP 1 Score: 481.9 bits (1239), Expect = 3.5e-132
Identity = 233/256 (91.02%), Postives = 244/256 (95.31%), Query Frame = 0


Query: 1   MAATSGALLNGLGSSFLCGGTRSQTLLAGARGSVNVIGGSRKLVIVAAASAKKSWLPGVR 60
           MAATSGA+LNGLGS FL GG+R+QTLLAG RG VNV+  SRKLV+VAAA  KKSWLP V+
Sbjct: 1   MAATSGAVLNGLGSPFLRGGSRTQTLLAGVRGGVNVV-SSRKLVVVAAAQPKKSWLPAVK 60

Query: 61  SGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAW 120
            GGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV+GIF+GQAW
Sbjct: 61  GGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFIGQAW 120

Query: 121 SGIPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTA 180
           SGIPWFEAGADP AIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTA
Sbjct: 121 SGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTA 180

Query: 181 ENFANSTGEQGYPGGKFFDPLGFAGSLKDGEYIPDTEKLERLKLAEIKHARIAMLAMLTF 240
           ENFAN+TGEQGYPGGKFFDPLGFAG++KDG YIPDTEKLERLKLAEIKHARIAMLAMLTF
Sbjct: 181 ENFANATGEQGYPGGKFFDPLGFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLTF 240

Query: 241 YFEAGQGKTPLGALGL 257
           YFEAGQGKTPLGALGL
Sbjct: 241 YFEAGQGKTPLGALGL 255

[Close]

BLAST of Sed0022231 vs. NCBI nr
Match: XP_022993917.1 (chlorophyll a-b binding protein CP24 10A, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 480.7 bits (1236), Expect = 7.8e-132
Identity = 233/256 (91.02%), Postives = 245/256 (95.70%), Query Frame = 0


Query: 1   MAATSGALLNGLGSSFLCGGTRSQTLLAGARGSVNVIGGSRKLVIVAAASAKKSWLPGVR 60
           MAATSGA+LNGLGS FL GG+R+QTLLAGARG VNV+ GSRKLVIVAAA  KKSW+P V+
Sbjct: 1   MAATSGAVLNGLGSPFLRGGSRTQTLLAGARGGVNVV-GSRKLVIVAAAQPKKSWIPAVK 60

Query: 61  SGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAW 120
            GGNLVDPEWLDGSLPGD+GFDPLGLGKDPAFLKWYREAELIHGRWAMAAV+GIFVGQAW
Sbjct: 61  GGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAW 120

Query: 121 SGIPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTA 180
           SGIPWFEAGADP AIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTA
Sbjct: 121 SGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTA 180

Query: 181 ENFANSTGEQGYPGGKFFDPLGFAGSLKDGEYIPDTEKLERLKLAEIKHARIAMLAMLTF 240
           ENFAN+TGEQGYPGGKFFDPLGFAG++KDG YIPDTEKLERLKLAEIKHARIAMLAML F
Sbjct: 181 ENFANATGEQGYPGGKFFDPLGFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIF 240

Query: 241 YFEAGQGKTPLGALGL 257
           YFEAGQGKTPLGALG+
Sbjct: 241 YFEAGQGKTPLGALGV 255

[Close]

BLAST of Sed0022231 vs. NCBI nr
Match: XP_022927871.1 (chlorophyll a-b binding protein CP24 10A, chloroplastic-like [Cucurbita moschata] >KAG6588777.1 Chlorophyll a-b binding protein CP24 10A, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7022550.1 Chlorophyll a-b binding protein CP24 10A, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 479.9 bits (1234), Expect = 1.3e-131
Identity = 233/255 (91.37%), Postives = 243/255 (95.29%), Query Frame = 0


Query: 2   AATSGALLNGLGSSFLCGGTRSQTLLAGARGSVNVIGGSRKLVIVAAASAKKSWLPGVRS 61
           AATSGALLNGLGS FL GG+R+QTLLAGARG VNV+  SRKLVIVAAA  KKSW+P V+ 
Sbjct: 5   AATSGALLNGLGSPFLHGGSRTQTLLAGARGGVNVV-SSRKLVIVAAAQPKKSWIPAVKG 64

Query: 62  GGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWS 121
           GGN +DPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV+GIF+GQAWS
Sbjct: 65  GGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFIGQAWS 124

Query: 122 GIPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE 181
           GIPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE
Sbjct: 125 GIPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE 184

Query: 182 NFANSTGEQGYPGGKFFDPLGFAGSLKDGEYIPDTEKLERLKLAEIKHARIAMLAMLTFY 241
           NFAN+TGEQGYPGGKFFDPLGFAG+LKDG YIPDTEKLERLKLAEIKHARIAMLAML FY
Sbjct: 185 NFANATGEQGYPGGKFFDPLGFAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFY 244

Query: 242 FEAGQGKTPLGALGL 257
           FEAGQGKTPLGALGL
Sbjct: 245 FEAGQGKTPLGALGL 258

[Close]

BLAST of Sed0022231 vs. NCBI nr
Match: XP_023550942.1 (chlorophyll a-b binding protein CP24 10A, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 479.9 bits (1234), Expect = 1.3e-131
Identity = 232/256 (90.62%), Postives = 245/256 (95.70%), Query Frame = 0


Query: 1   MAATSGALLNGLGSSFLCGGTRSQTLLAGARGSVNVIGGSRKLVIVAAASAKKSWLPGVR 60
           MAATSGA+LNGLGS FL GG+R+QTLLAGARG VNV+ GSRKLVIVAAA  KKSW+P V+
Sbjct: 1   MAATSGAVLNGLGSPFLHGGSRTQTLLAGARGGVNVV-GSRKLVIVAAAQPKKSWIPAVK 60

Query: 61  SGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAW 120
            GGNLVDPEWLDGSLPGD+GFDPLGLGKDPAFLKWYREAELIHGRWAMAAV+GIFVGQAW
Sbjct: 61  GGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAW 120

Query: 121 SGIPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTA 180
           SGIPWFEAGADP AIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTA
Sbjct: 121 SGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTA 180

Query: 181 ENFANSTGEQGYPGGKFFDPLGFAGSLKDGEYIPDTEKLERLKLAEIKHARIAMLAMLTF 240
           ENFAN+TGEQGYPGGKFFDPLGFAG++KDG YIPDTEKLERLKLAEIKHAR+AMLAML F
Sbjct: 181 ENFANATGEQGYPGGKFFDPLGFAGTIKDGVYIPDTEKLERLKLAEIKHARLAMLAMLIF 240

Query: 241 YFEAGQGKTPLGALGL 257
           YFEAGQGKTPLGALG+
Sbjct: 241 YFEAGQGKTPLGALGV 255

[Close]

BLAST of Sed0022231 vs. ExPASy Swiss-Prot
Match: P27524 (Chlorophyll a-b binding protein CP24 10A, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CAP10A PE=3 SV=1)

HSP 1 Score: 434.5 bits (1116), Expect = 8.4e-121
Identity = 210/256 (82.03%), Postives = 226/256 (88.28%), Query Frame = 0


Query: 1   MAATSGALLNGLGSSFLCGGTRSQTLLAGARGSVNVIGGSRKLVIVAAASAKKSWLPGVR 60
           MA TS A+LNGL SSFL GG +SQ LLA    +      + K   V AA+AKKSW+P VR
Sbjct: 1   MATTSAAVLNGLSSSFLTGGNKSQALLAAPLAARVGGAATPKRFTVLAAAAKKSWIPAVR 60

Query: 61  SGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAW 120
            GGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAW
Sbjct: 61  GGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAW 120

Query: 121 SGIPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTA 180
           SGIPWFEAGADP AIAPFSFG+LLGTQL+LMGWVESKRWVDFF+P+SQSVEWATPWS+TA
Sbjct: 121 SGIPWFEAGADPGAIAPFSFGTLLGTQLILMGWVESKRWVDFFDPDSQSVEWATPWSKTA 180

Query: 181 ENFANSTGEQGYPGGKFFDPLGFAGSLKDGEYIPDTEKLERLKLAEIKHARIAMLAMLTF 240
           ENFAN TGEQGYPGGKFFDPL  AG+L +G Y+PDTEKLERLK+AEIKHAR+AMLAML F
Sbjct: 181 ENFANFTGEQGYPGGKFFDPLALAGTLNNGVYVPDTEKLERLKVAEIKHARLAMLAMLIF 240

Query: 241 YFEAGQGKTPLGALGL 257
           YFEAGQGKTPLGALGL
Sbjct: 241 YFEAGQGKTPLGALGL 256

[Close]

BLAST of Sed0022231 vs. ExPASy Swiss-Prot
Match: P27525 (Chlorophyll a-b binding protein CP24 10B, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CAP10B PE=3 SV=1)

HSP 1 Score: 424.1 bits (1089), Expect = 1.1e-117
Identity = 207/257 (80.54%), Postives = 226/257 (87.94%), Query Frame = 0


Query: 1   MAATSG-ALLNGLGSSFLCGGTRSQTLLAGARGSVNVIGGSRKLVIVAAASAKKSWLPGV 60
           M  TS  A+LNGL SSFL GG ++Q LL GA  +  V    R +V  AA + KKSW+P V
Sbjct: 1   MTTTSATAVLNGLSSSFLTGGKKTQALL-GAHVTARVTTPKRFVVAAAAVAPKKSWIPAV 60

Query: 61  RSGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQA 120
           +SGGNLVDPEWLDGSLPGD+GFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQA
Sbjct: 61  KSGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQA 120

Query: 121 WSGIPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRT 180
           WSGIPWFEAGADP AIAPFSFGSLLGTQLLLMGWVESKRWVDFF+ +SQS++WATPWS+T
Sbjct: 121 WSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFDNDSQSIDWATPWSKT 180

Query: 181 AENFANSTGEQGYPGGKFFDPLGFAGSLKDGEYIPDTEKLERLKLAEIKHARIAMLAMLT 240
           AENFAN TGEQGYPGGKFFDPL  AG+L +G Y+PDTEKLERLKLAEIKH+R+AMLAML 
Sbjct: 181 AENFANFTGEQGYPGGKFFDPLALAGTLNNGVYVPDTEKLERLKLAEIKHSRLAMLAMLI 240

Query: 241 FYFEAGQGKTPLGALGL 257
           FYFEAGQGKTPLGALGL
Sbjct: 241 FYFEAGQGKTPLGALGL 256

[Close]

BLAST of Sed0022231 vs. ExPASy Swiss-Prot
Match: P36494 (Chlorophyll a-b binding protein CP24, chloroplastic OS=Spinacia oleracea OX=3562 PE=2 SV=1)

HSP 1 Score: 416.8 bits (1070), Expect = 1.8e-115
Identity = 204/259 (78.76%), Postives = 226/259 (87.26%), Query Frame = 0


Query: 2   AATSG-ALLNGLGSSFLCGGTRS--QTLLAGARGSVNVIGGSRKLVIVAAASA-KKSWLP 61
           AATS  A++NG  S FL GG +S    L   ++    V   SRKLV+VAAA+A KKSW+P
Sbjct: 3   AATSATAIVNGFTSPFLSGGKKSSQSLLFVNSKVGAGVSTTSRKLVVVAAAAAPKKSWIP 62

Query: 62  GVRSGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVG 121
            V+ GGN +DPEWLDGSLPGD+GFDPLGLGKDPAFLKWYREAELIHGRWAM AVLGIFVG
Sbjct: 63  AVKGGGNFLDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMLAVLGIFVG 122

Query: 122 QAWSGIPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWS 181
           QAW+GIPWFEAGADP A+APFSFG+LLGTQLLLMGWVESKRWVDFF+P+SQSVEWATPWS
Sbjct: 123 QAWTGIPWFEAGADPGAVAPFSFGTLLGTQLLLMGWVESKRWVDFFDPDSQSVEWATPWS 182

Query: 182 RTAENFANSTGEQGYPGGKFFDPLGFAGSLKDGEYIPDTEKLERLKLAEIKHARIAMLAM 241
           RTAENF+NSTGEQGYPGGKFFDPL  AG++ +G Y PDT+KLERLKLAEIKHAR+AMLAM
Sbjct: 183 RTAENFSNSTGEQGYPGGKFFDPLSLAGTISNGVYNPDTDKLERLKLAEIKHARLAMLAM 242

Query: 242 LTFYFEAGQGKTPLGALGL 257
           L FYFEAGQGKTPLGALGL
Sbjct: 243 LIFYFEAGQGKTPLGALGL 261

[Close]

BLAST of Sed0022231 vs. ExPASy Swiss-Prot
Match: P13869 (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida OX=4102 PE=2 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.2e-31
Identity = 81/213 (38.03%), Postives = 111/213 (52.11%), Query Frame = 0


Query: 39  GSRKLVI--VAAASAKKSWLPGVRSGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWY 98
           GSR + +  VAA   +  W PG         PEWLDGSLPGD+GFDPLGLG DP  LKW 
Sbjct: 50  GSRSVAVSAVAADPDRPLWFPG------STPPEWLDGSLPGDFGFDPLGLGSDPESLKWN 109

Query: 99  REAELIHGRWAMAAVLGIFVGQAWSGI------PWFEAGADPSAIAPFSFGSLLGTQLLL 158
            +AEL+H RWAM    GIF+ +  + I       W+ AG            +L   +L+L
Sbjct: 110 AQAELVHSRWAMLGAAGIFIPEFLTKIGVLNTPSWYTAGEQEYFT---DTTTLFVIELVL 169

Query: 159 MGWVESKRWVDFFNPESQSVEWATPWSRTAENFANSTGEQGYPGGKFFDPLGFAGSLKDG 218
           +GW E +RW D   P   + +   P      N   +  + GYPGG +FDPLG+       
Sbjct: 170 IGWAEGRRWADIIKPGCVNTDPIFP------NNKLTGTDVGYPGGLWFDPLGWGSG---- 229

Query: 219 EYIPDTEKLERLKLAEIKHARIAMLAMLTFYFE 244
                  K++ L+  EIK+ R+AMLA++  +F+
Sbjct: 230 ----SPAKIKELRTKEIKNGRLAMLAVMGAWFQ 239

[Close]

BLAST of Sed0022231 vs. ExPASy Swiss-Prot
Match: Q9C639 (Photosystem I chlorophyll a/b-binding protein 5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCA5 PE=1 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 2.1e-31
Identity = 97/246 (39.43%), Postives = 129/246 (52.44%), Query Frame = 0


Query: 8   LLNGLGSSFLCGGTRSQTLLAGARGSVNVIGGSRKLVIVAAASAKKSWLPGVRSGGNLVD 67
           L  G+   FL     + +++     SV   GG    +    A  + +WLPG      L  
Sbjct: 5   LRGGITGGFLHHRRDASSVITRRISSVKAAGGG---INPTVAVERATWLPG------LNP 64

Query: 68  PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQ--AWSGI-- 127
           P +LDG+L GDYGFDPLGLG+DP  LKWY +AEL+H R+AM  V GI        +GI  
Sbjct: 65  PPYLDGNLAGDYGFDPLGLGEDPESLKWYVQAELVHSRFAMLGVAGILFTDLLRTTGIRN 124

Query: 128 --PWFEAGADPSAIAPFSFGS---LLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSR 187
              W+EAGA       F F S   L+  Q LLMG+ E+KR++DF +P SQ+ E +  +  
Sbjct: 125 LPVWYEAGA-----VKFDFASTKTLIVVQFLLMGFAETKRYMDFVSPGSQAKEGSFFFGL 184

Query: 188 TAENFANSTGEQGYPGGKFFDPLGFAGSLKDGEYIPDTEKLERLKLAEIKHARIAMLAML 245
            A   A    E GYPGG   +PLG A          D +     KL EIK+ R+AM+AML
Sbjct: 185 EA---ALEGLEPGYPGGPLLNPLGLA---------KDVQNAHDWKLKEIKNGRLAMMAML 224

[Close]

BLAST of Sed0022231 vs. ExPASy TrEMBL
Match: A0A6J1JEC2 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111486120 PE=3 SV=1)

HSP 1 Score: 482.3 bits (1240), Expect = 1.3e-132
Identity = 234/256 (91.41%), Postives = 244/256 (95.31%), Query Frame = 0


Query: 1   MAATSGALLNGLGSSFLCGGTRSQTLLAGARGSVNVIGGSRKLVIVAAASAKKSWLPGVR 60
           MAATSGALLNGLGS FL GG+R+QTLLAGARG VNV+  SRKLVIVAAA  KKSW+P V+
Sbjct: 1   MAATSGALLNGLGSPFLHGGSRTQTLLAGARGGVNVV-SSRKLVIVAAAQPKKSWIPAVK 60

Query: 61  SGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAW 120
            GGN +DPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV+GIF+GQAW
Sbjct: 61  GGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFIGQAW 120

Query: 121 SGIPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTA 180
           SGIPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTA
Sbjct: 121 SGIPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTA 180

Query: 181 ENFANSTGEQGYPGGKFFDPLGFAGSLKDGEYIPDTEKLERLKLAEIKHARIAMLAMLTF 240
           ENFAN+TGEQGYPGGKFFDPLGFAG+LKDG YIPDTEKLERLKLAEIKHARIAMLAML F
Sbjct: 181 ENFANATGEQGYPGGKFFDPLGFAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIF 240

Query: 241 YFEAGQGKTPLGALGL 257
           YFEAGQGKTPLGALGL
Sbjct: 241 YFEAGQGKTPLGALGL 255

[Close]

BLAST of Sed0022231 vs. ExPASy TrEMBL
Match: A0A6J1JU87 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111489772 PE=3 SV=1)

HSP 1 Score: 480.7 bits (1236), Expect = 3.8e-132
Identity = 233/256 (91.02%), Postives = 245/256 (95.70%), Query Frame = 0


Query: 1   MAATSGALLNGLGSSFLCGGTRSQTLLAGARGSVNVIGGSRKLVIVAAASAKKSWLPGVR 60
           MAATSGA+LNGLGS FL GG+R+QTLLAGARG VNV+ GSRKLVIVAAA  KKSW+P V+
Sbjct: 1   MAATSGAVLNGLGSPFLRGGSRTQTLLAGARGGVNVV-GSRKLVIVAAAQPKKSWIPAVK 60

Query: 61  SGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAW 120
            GGNLVDPEWLDGSLPGD+GFDPLGLGKDPAFLKWYREAELIHGRWAMAAV+GIFVGQAW
Sbjct: 61  GGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAW 120

Query: 121 SGIPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTA 180
           SGIPWFEAGADP AIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTA
Sbjct: 121 SGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTA 180

Query: 181 ENFANSTGEQGYPGGKFFDPLGFAGSLKDGEYIPDTEKLERLKLAEIKHARIAMLAMLTF 240
           ENFAN+TGEQGYPGGKFFDPLGFAG++KDG YIPDTEKLERLKLAEIKHARIAMLAML F
Sbjct: 181 ENFANATGEQGYPGGKFFDPLGFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIF 240

Query: 241 YFEAGQGKTPLGALGL 257
           YFEAGQGKTPLGALG+
Sbjct: 241 YFEAGQGKTPLGALGV 255

[Close]

BLAST of Sed0022231 vs. ExPASy TrEMBL
Match: A0A6J1EIR2 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111434638 PE=3 SV=1)

HSP 1 Score: 479.9 bits (1234), Expect = 6.4e-132
Identity = 233/255 (91.37%), Postives = 243/255 (95.29%), Query Frame = 0


Query: 2   AATSGALLNGLGSSFLCGGTRSQTLLAGARGSVNVIGGSRKLVIVAAASAKKSWLPGVRS 61
           AATSGALLNGLGS FL GG+R+QTLLAGARG VNV+  SRKLVIVAAA  KKSW+P V+ 
Sbjct: 5   AATSGALLNGLGSPFLHGGSRTQTLLAGARGGVNVV-SSRKLVIVAAAQPKKSWIPAVKG 64

Query: 62  GGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWS 121
           GGN +DPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV+GIF+GQAWS
Sbjct: 65  GGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFIGQAWS 124

Query: 122 GIPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE 181
           GIPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE
Sbjct: 125 GIPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE 184

Query: 182 NFANSTGEQGYPGGKFFDPLGFAGSLKDGEYIPDTEKLERLKLAEIKHARIAMLAMLTFY 241
           NFAN+TGEQGYPGGKFFDPLGFAG+LKDG YIPDTEKLERLKLAEIKHARIAMLAML FY
Sbjct: 185 NFANATGEQGYPGGKFFDPLGFAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFY 244

Query: 242 FEAGQGKTPLGALGL 257
           FEAGQGKTPLGALGL
Sbjct: 245 FEAGQGKTPLGALGL 258

[Close]

BLAST of Sed0022231 vs. ExPASy TrEMBL
Match: A0A6J1FGC5 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111445242 PE=3 SV=1)

HSP 1 Score: 479.6 bits (1233), Expect = 8.4e-132
Identity = 232/256 (90.62%), Postives = 245/256 (95.70%), Query Frame = 0


Query: 1   MAATSGALLNGLGSSFLCGGTRSQTLLAGARGSVNVIGGSRKLVIVAAASAKKSWLPGVR 60
           MAATSGA+LNGLGS FL GG+R+QTLLAGARG VNV+ GSRKLVIVAAA  KKSW+P V+
Sbjct: 1   MAATSGAVLNGLGSPFLHGGSRTQTLLAGARGGVNVV-GSRKLVIVAAAQPKKSWIPAVK 60

Query: 61  SGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAW 120
            GGNLVDPEWLDGSLPGD+GFDPLGLGKDPAFLKWYREAELIHGRWAMAAV+GIFVGQAW
Sbjct: 61  GGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAW 120

Query: 121 SGIPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTA 180
           SGIPWFEAGADP AIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTA
Sbjct: 121 SGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTA 180

Query: 181 ENFANSTGEQGYPGGKFFDPLGFAGSLKDGEYIPDTEKLERLKLAEIKHARIAMLAMLTF 240
           ENFAN+TGEQGYPGGKFFDPLGFAG++KDG YIPDT+KLERLKLAEIKHARIAMLAML F
Sbjct: 181 ENFANATGEQGYPGGKFFDPLGFAGTIKDGVYIPDTDKLERLKLAEIKHARIAMLAMLIF 240

Query: 241 YFEAGQGKTPLGALGL 257
           YFEAGQGKTPLGALG+
Sbjct: 241 YFEAGQGKTPLGALGV 255

[Close]

BLAST of Sed0022231 vs. ExPASy TrEMBL
Match: A0A5D3DGI0 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00250 PE=3 SV=1)

HSP 1 Score: 478.4 bits (1230), Expect = 1.9e-131
Identity = 232/256 (90.62%), Postives = 243/256 (94.92%), Query Frame = 0


Query: 1   MAATSGALLNGLGSSFLCGGTRSQTLLAGARGSVNVIGGSRKLVIVAAASAKKSWLPGVR 60
           MAATSGA+LNGLGS FL G +R++TLLAGARG VNV+  S KLV++AAA  KKSW+PGVR
Sbjct: 1   MAATSGAVLNGLGSPFLRGSSRTRTLLAGARGGVNVVSSS-KLVVIAAAQPKKSWIPGVR 60

Query: 61  SGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAW 120
            GGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV+GIFVGQAW
Sbjct: 61  GGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAW 120

Query: 121 SGIPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTA 180
           SGIPWFEAGADP AIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTA
Sbjct: 121 SGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTA 180

Query: 181 ENFANSTGEQGYPGGKFFDPLGFAGSLKDGEYIPDTEKLERLKLAEIKHARIAMLAMLTF 240
           ENFAN+TGEQGYPGGKFFDPLGFAG+LKDG YIPDTEKLERLKLAEIKHARIAMLAML F
Sbjct: 181 ENFANATGEQGYPGGKFFDPLGFAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIF 240

Query: 241 YFEAGQGKTPLGALGL 257
           YFEAGQGKTPLGALGL
Sbjct: 241 YFEAGQGKTPLGALGL 255

[Close]

BLAST of Sed0022231 vs. TAIR 10
Match: AT1G15820.1 (light harvesting complex photosystem II subunit 6 )

HSP 1 Score: 419.5 bits (1077), Expect = 2.0e-117
Identity = 202/255 (79.22%), Postives = 220/255 (86.27%), Query Frame = 0


Query: 3   ATSGALLNGLGSSFLCGGTRSQTLLAGARGS-VNVIGGSRKLVIVAAASAKKSWLPGVRS 62
           A SGA+L+GLGSSFL GG R  T LA   G+    +G    +V  AAA  KKSW+P V+ 
Sbjct: 4   AVSGAVLSGLGSSFLTGGKRGATALASGVGTGAQRVGRKTLIVAAAAAQPKKSWIPAVKG 63

Query: 63  GGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWS 122
           GGN +DPEWLDGSLPGD+GFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWS
Sbjct: 64  GGNFLDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWS 123

Query: 123 GIPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE 182
           G+ WFEAGA P AIAPFSFGSLLGTQLLLMGWVESKRWVDFFNP+SQSVEWATPWS+TAE
Sbjct: 124 GVAWFEAGAQPDAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEWATPWSKTAE 183

Query: 183 NFANSTGEQGYPGGKFFDPLGFAGSLKDGEYIPDTEKLERLKLAEIKHARIAMLAMLTFY 242
           NFAN TG+QGYPGG+FFDPLG AG  +DG Y PD EKLERLKLAEIKH+R+AM+AML FY
Sbjct: 184 NFANYTGDQGYPGGRFFDPLGLAGKNRDGVYEPDFEKLERLKLAEIKHSRLAMVAMLIFY 243

Query: 243 FEAGQGKTPLGALGL 257
           FEAGQGKTPLGALGL
Sbjct: 244 FEAGQGKTPLGALGL 258

[Close]

BLAST of Sed0022231 vs. TAIR 10
Match: AT1G45474.1 (photosystem I light harvesting complex gene 5 )

HSP 1 Score: 137.5 bits (345), Expect = 1.5e-32
Identity = 97/246 (39.43%), Postives = 129/246 (52.44%), Query Frame = 0


Query: 8   LLNGLGSSFLCGGTRSQTLLAGARGSVNVIGGSRKLVIVAAASAKKSWLPGVRSGGNLVD 67
           L  G+   FL     + +++     SV   GG    +    A  + +WLPG      L  
Sbjct: 5   LRGGITGGFLHHRRDASSVITRRISSVKAAGGG---INPTVAVERATWLPG------LNP 64

Query: 68  PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQ--AWSGI-- 127
           P +LDG+L GDYGFDPLGLG+DP  LKWY +AEL+H R+AM  V GI        +GI  
Sbjct: 65  PPYLDGNLAGDYGFDPLGLGEDPESLKWYVQAELVHSRFAMLGVAGILFTDLLRTTGIRN 124

Query: 128 --PWFEAGADPSAIAPFSFGS---LLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSR 187
              W+EAGA       F F S   L+  Q LLMG+ E+KR++DF +P SQ+ E +  +  
Sbjct: 125 LPVWYEAGA-----VKFDFASTKTLIVVQFLLMGFAETKRYMDFVSPGSQAKEGSFFFGL 184

Query: 188 TAENFANSTGEQGYPGGKFFDPLGFAGSLKDGEYIPDTEKLERLKLAEIKHARIAMLAML 245
            A   A    E GYPGG   +PLG A          D +     KL EIK+ R+AM+AML
Sbjct: 185 EA---ALEGLEPGYPGGPLLNPLGLA---------KDVQNAHDWKLKEIKNGRLAMMAML 224

[Close]

BLAST of Sed0022231 vs. TAIR 10
Match: AT1G45474.2 (photosystem I light harvesting complex gene 5 )

HSP 1 Score: 137.5 bits (345), Expect = 1.5e-32
Identity = 97/246 (39.43%), Postives = 129/246 (52.44%), Query Frame = 0


Query: 8   LLNGLGSSFLCGGTRSQTLLAGARGSVNVIGGSRKLVIVAAASAKKSWLPGVRSGGNLVD 67
           L  G+   FL     + +++     SV   GG    +    A  + +WLPG      L  
Sbjct: 5   LRGGITGGFLHHRRDASSVITRRISSVKAAGGG---INPTVAVERATWLPG------LNP 64

Query: 68  PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQ--AWSGI-- 127
           P +LDG+L GDYGFDPLGLG+DP  LKWY +AEL+H R+AM  V GI        +GI  
Sbjct: 65  PPYLDGNLAGDYGFDPLGLGEDPESLKWYVQAELVHSRFAMLGVAGILFTDLLRTTGIRN 124

Query: 128 --PWFEAGADPSAIAPFSFGS---LLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSR 187
              W+EAGA       F F S   L+  Q LLMG+ E+KR++DF +P SQ+ E +  +  
Sbjct: 125 LPVWYEAGA-----VKFDFASTKTLIVVQFLLMGFAETKRYMDFVSPGSQAKEGSFFFGL 184

Query: 188 TAENFANSTGEQGYPGGKFFDPLGFAGSLKDGEYIPDTEKLERLKLAEIKHARIAMLAML 245
            A   A    E GYPGG   +PLG A          D +     KL EIK+ R+AM+AML
Sbjct: 185 EA---ALEGLEPGYPGGPLLNPLGLA---------KDVQNAHDWKLKEIKNGRLAMMAML 224

[Close]

BLAST of Sed0022231 vs. TAIR 10
Match: AT1G19150.1 (photosystem I light harvesting complex gene 6 )

HSP 1 Score: 137.1 bits (344), Expect = 2.0e-32
Identity = 81/196 (41.33%), Postives = 104/196 (53.06%), Query Frame = 0


Query: 55  WLPGVRSGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGI 114
           W PG         PEWLDGSLPGD+GFDPLGLG DP  LKW+ +AELIH RWAM AV GI
Sbjct: 68  WFPGSS------PPEWLDGSLPGDFGFDPLGLGSDPDTLKWFAQAELIHSRWAMLAVTGI 127

Query: 115 FVGQAW------SGIPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQ 174
            + +            W++AG+           +L   Q++LMGW E +RW D   P S 
Sbjct: 128 IIPECLERLGFIENFSWYDAGSREYFA---DSTTLFVAQMVLMGWAEGRRWADLIKPGSV 187

Query: 175 SVEWATPWSRTAENFANSTGEQGYPGGKFFDPLGFAGSLKDGEYIPDTEKLERLKLAEIK 234
            +E   P      +  N   + GYPGG +FD + +      G   P+   + R K  EIK
Sbjct: 188 DIEPKYP------HKVNPKPDVGYPGGLWFDFMMW------GRGSPEPVMVLRTK--EIK 240

Query: 235 HARIAMLAMLTFYFEA 245
           + R+AMLA L F F+A
Sbjct: 248 NGRLAMLAFLGFCFQA 240

[Close]

BLAST of Sed0022231 vs. TAIR 10
Match: AT3G61470.1 (photosystem I light harvesting complex gene 2 )

HSP 1 Score: 134.0 bits (336), Expect = 1.7e-31
Identity = 78/204 (38.24%), Postives = 106/204 (51.96%), Query Frame = 0


Query: 46  VAAASAKKSWLPGVRSGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGR 105
           VAA   +  W PG         PEWLDGSLPGD+GFDPLGL  DP  LKW  +AE++H R
Sbjct: 46  VAADPDRPIWFPG------STPPEWLDGSLPGDFGFDPLGLSSDPDSLKWNVQAEIVHCR 105

Query: 106 WAMAAVLGIFVGQAWSGI------PWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRW 165
           WAM    GIF+ +  + I       W+ AG            +L   +L+L+GW E +RW
Sbjct: 106 WAMLGAAGIFIPEFLTKIGILNTPSWYTAGEQEYFT---DKTTLFVVELILIGWAEGRRW 165

Query: 166 VDFFNPESQSVEWATPWSRTAENFANSTGEQGYPGGKFFDPLGFAGSLKDGEYIPDTEKL 225
            D   P S + +   P      N   +  + GYPGG +FDPLG+              KL
Sbjct: 166 ADIIKPGSVNTDPVFP------NNKLTGTDVGYPGGLWFDPLGWGSG--------SPAKL 225

Query: 226 ERLKLAEIKHARIAMLAMLTFYFE 244
           + L+  EIK+ R+AMLA++  +F+
Sbjct: 226 KELRTKEIKNGRLAMLAVMGAWFQ 226

The following BLAST results are available for this feature:

BLAST of Sed0022231 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022988907.1	2.7e-132	91.41	chlorophyll a-b binding protein CP24 10A, chloroplastic-like [Cucurbita maxima]	[more]
XP_038885126.1	3.5e-132	91.02	chlorophyll a-b binding protein CP24 10A, chloroplastic [Benincasa hispida]	[more]
XP_022993917.1	7.8e-132	91.02	chlorophyll a-b binding protein CP24 10A, chloroplastic-like [Cucurbita maxima]	[more]
XP_022927871.1	1.3e-131	91.37	chlorophyll a-b binding protein CP24 10A, chloroplastic-like [Cucurbita moschata...	[more]
XP_023550942.1	1.3e-131	90.63	chlorophyll a-b binding protein CP24 10A, chloroplastic-like [Cucurbita pepo sub...	[more]

BLAST of Sed0022231 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P27524	8.4e-121	82.03	Chlorophyll a-b binding protein CP24 10A, chloroplastic OS=Solanum lycopersicum ...	[more]
P27525	1.1e-117	80.54	Chlorophyll a-b binding protein CP24 10B, chloroplastic OS=Solanum lycopersicum ...	[more]
P36494	1.8e-115	78.76	Chlorophyll a-b binding protein CP24, chloroplastic OS=Spinacia oleracea OX=3562...	[more]
P13869	1.2e-31	38.03	Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida OX=4102 PE=2 S...	[more]
Q9C639	2.1e-31	39.43	Photosystem I chlorophyll a/b-binding protein 5, chloroplastic OS=Arabidopsis th...	[more]

BLAST of Sed0022231 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JEC2	1.3e-132	91.41	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1JU87	3.8e-132	91.02	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1EIR2	6.4e-132	91.37	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1FGC5	8.4e-132	90.63	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A5D3DGI0	1.9e-131	90.63	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=11...	[more]

BLAST of Sed0022231 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G15820.1	2.0e-117	79.22	light harvesting complex photosystem II subunit 6	[more]
AT1G45474.1	1.5e-32	39.43	photosystem I light harvesting complex gene 5	[more]
AT1G45474.2	1.5e-32	39.43	photosystem I light harvesting complex gene 5	[more]
AT1G19150.1	2.0e-32	41.33	photosystem I light harvesting complex gene 6	[more]
AT3G61470.1	1.7e-31	38.24	photosystem I light harvesting complex gene 2	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 68..244 e-value: 2.7E-48 score: 164.5
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10	Chlorophyll a/b binding protein domain	coord: 68..255 e-value: 1.1E-53 score: 184.0
None	No IPR available	PANTHER	PTHR21649:SF114	CHLOROPHYLL A-B BINDING PROTEIN CP24 10A, CHLOROPLASTIC	coord: 1..256
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 64..256
IPR001344	Chlorophyll A-B binding protein, plant and chromista	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 1..256

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0022231.1	Sed0022231.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009768	photosynthesis, light harvesting in photosystem I
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0009416	response to light stimulus
biological_process	GO:0009765	photosynthesis, light harvesting
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0016020	membrane
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0046872	metal ion binding