Sed0022025 (gene) Chayote v1

Overview


Name	Sed0022025
Type	gene
Organism	Sechium edule (Chayote v1)
Description	DNA ligase 1-like
Location	LG12: 5318588 .. 5320829 (-)
RNA-Seq Expression	Sed0022025
Synteny	Sed0022025

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCTGTGGAGAGTCCAAGCTCGCCGTCGCCACCGCCGACGGCATCCTCGGCCGCAAGAAATCCTCCGCCAGTCGGAAGCGCAGCCGCAAAGCCGCCGCCGCCGCTGATGGATCTTCGAGCGGCGCTGAGTCGGATGTGGCTGATTTGAAGATTGCACCTCGGAAGATCGATGAGGAGAAAGCCGACGAAGCTGTGAAGGTTGAATCGGAGCCGCGAGGCGAGAAGAAAACTGACGGATCTGTGAAGGTTGAATCAGAGAACGAGGCTGAGCGGCAAGAAGAGGAGATGAGCGATTTGGAGAAAATCGATCGCGCTTTGAAGATCCAATTGGAGAAGAAAGCGGAAGAGCGAGAAGAGAAGAAGAGCGATTTGGAGAAAATCAATGGCGCTGTGAAGATTGAATCGGAGAAGAAAATCGATAGCGCCGTGGAGATTGAATCGGAGAACAAAACAGAGCAACGAGAAGAGAAGCAAATCAACGGCGATTTGAAGATTGAATCGGAGAACAAAATACAGCAACGAGAAGAGCAGAAAATCGACGGCGCTGTGAAGATTGGATCGGAGATCAAACCAGAGCAACAAGAAGAGAAGAAGAGCGAAATGGAGAAAATCGACAGCGAATCGGAGAAGAAACCAGAACAAGGCGCTGTGTCGGACGAAGGATTGAAAACAGAGGAGATAACCGGCGACGGCGAGAAGAAAGAGAAAGAGGACGGCGTTAATGGCGGTGCTGTTGAAAAACAGGTAATCGGAGAAACGAAAACGGAGGAGGATGCGGTTGTTAATGGCGATTCCGTTGAAAAACAGGTGATCGGAGAAACAAAAGCGGAGAAGGAGGCGGCTGTTAACGGCGGAGGAATTGAAGTAGAGCAGGAAATTGAAGCTGTTGAAGAGAAGAAATTGGCGGGAGAAATGAAGGTAGAGAAGGAGGGCGGCGACAATGGCGGCGTTGTTCAACAAGAAATGAAGGCTGTTGAGGAAAATAAATTTGCCGAAGAACTGAAAGTTGAGAAGGAAAATGGTAAGTAAAATTTCCACACAATTGCAAGAAAATTATTATTATTATTATTTTTTTTGTTGAGAAAAATTATTTCAAACTTCTGTCATAAAATTGCTTTTAAAAAACTATTAGTAAAAAACATATAAAGTTTGTCGGTATTTAGTTTTCGAGTATCTTAAAATTAAACACTTTTATTAAATAATATTCACTTACCATTCATCATTGGAGGAAGTTTTTTTATAAATAAATTCAAATCGTTATAAATAAATGATTAAAAGTTGAGTAATTAGAAATGAGGCATTATTTTGAATAATTATCAATAAATTATTAGAAATTAATAGTTAGTAAGTACTCATTTTAAATTCTTCTTAAATTCAATAAATAAACTCTCCCCGAGAAATGTTAATATGTCTACCGTTTGAAAGTAGAAAATCAAATTTTGAAGATAGAAATTTAAACTCATTTTTCAACTAATAACATCATAGTCATGGATGCGAATTAATGTAGTGTATTGTTTATAGTAATAAACAAAATTGGTAATAATAACAATAATTTGTTTGATTTATCACCTTTACAAAGATCTAAAAAATGGTTGAAACTAATTTTTTTTTACTCTAATTCTTGTGGACAGGAGAGGAAGTGAAATTGAAAGAAGAAATTCCAGCTAAGATAGAAGAAGCAGCAGCTCCAATAGTCGAAGAAATTAAAATCTCAGCCGCTCCAGTACAGGACAAGAATTTGATACATGCCAAGGTTTGCTAATTAATCATTACTTTATTAATCTTGTAAAATATCCACATAGTAACAAGTTATTGGGTCATATTATTCATATGAACACTACTATTTTTTAAAAAATACACACTATTTTGGGGGAAGAAAATCATTTATGATAAAATTTCCACTAAGAAAAACACAGTTGACTATTCTCAAAAGAAAAAAAAGAAAAAAGACACACAGTCGACACAGTTATCCAAATGCATTTCTACAGCTTATTTCTTTTTTGACCGTTTGTTTGGTTAGTTTTAAAATTTATTAACTTTTGTGTGTAAATCTATCTCTAAACAAATTTTTACTAATTTTTTTTTTAATTTTTAAAAATAATTCTCATTTCTAGCAATTCATTTTCAATAATTCATTAATAACTATTAAATTATTTTTAATCATCAATAAATTTTGGTTTAGCAGGAAAATGCAGCAGATTTGGCAGTCAAGGTATCAACAGCAGAGGAAAAGAAATAG

mRNA sequence

ATGGGCTGTGGAGAGTCCAAGCTCGCCGTCGCCACCGCCGACGGCATCCTCGGCCGCAAGAAATCCTCCGCCAGTCGGAAGCGCAGCCGCAAAGCCGCCGCCGCCGCTGATGGATCTTCGAGCGGCGCTGAGTCGGATGTGGCTGATTTGAAGATTGCACCTCGGAAGATCGATGAGGAGAAAGCCGACGAAGCTGTGAAGGTTGAATCGGAGCCGCGAGGCGAGAAGAAAACTGACGGATCTGTGAAGGTTGAATCAGAGAACGAGGCTGAGCGGCAAGAAGAGGAGATGAGCGATTTGGAGAAAATCGATCGCGCTTTGAAGATCCAATTGGAGAAGAAAGCGGAAGAGCGAGAAGAGAAGAAGAGCGATTTGGAGAAAATCAATGGCGCTGTGAAGATTGAATCGGAGAAGAAAATCGATAGCGCCGTGGAGATTGAATCGGAGAACAAAACAGAGCAACGAGAAGAGAAGCAAATCAACGGCGATTTGAAGATTGAATCGGAGAACAAAATACAGCAACGAGAAGAGCAGAAAATCGACGGCGCTGTGAAGATTGGATCGGAGATCAAACCAGAGCAACAAGAAGAGAAGAAGAGCGAAATGGAGAAAATCGACAGCGAATCGGAGAAGAAACCAGAACAAGGCGCTGTGTCGGACGAAGGATTGAAAACAGAGGAGATAACCGGCGACGGCGAGAAGAAAGAGAAAGAGGACGGCGTTAATGGCGGTGCTGTTGAAAAACAGGTAATCGGAGAAACGAAAACGGAGGAGGATGCGGTTGTTAATGGCGATTCCGTTGAAAAACAGGTGATCGGAGAAACAAAAGCGGAGAAGGAGGCGGCTGTTAACGGCGGAGGAATTGAAGTAGAGCAGGAAATTGAAGCTGTTGAAGAGAAGAAATTGGCGGGAGAAATGAAGGTAGAGAAGGAGGGCGGCGACAATGGCGGCGTTGTTCAACAAGAAATGAAGGCTGTTGAGGAAAATAAATTTGCCGAAGAACTGAAAGTTGAGAAGGAAAATGGAGAGGAAGTGAAATTGAAAGAAGAAATTCCAGCTAAGATAGAAGAAGCAGCAGCTCCAATAGTCGAAGAAATTAAAATCTCAGCCGCTCCAGTACAGGACAAGAATTTGATACATGCCAAGGAAAATGCAGCAGATTTGGCAGTCAAGGTATCAACAGCAGAGGAAAAGAAATAG

Coding sequence (CDS)

ATGGGCTGTGGAGAGTCCAAGCTCGCCGTCGCCACCGCCGACGGCATCCTCGGCCGCAAGAAATCCTCCGCCAGTCGGAAGCGCAGCCGCAAAGCCGCCGCCGCCGCTGATGGATCTTCGAGCGGCGCTGAGTCGGATGTGGCTGATTTGAAGATTGCACCTCGGAAGATCGATGAGGAGAAAGCCGACGAAGCTGTGAAGGTTGAATCGGAGCCGCGAGGCGAGAAGAAAACTGACGGATCTGTGAAGGTTGAATCAGAGAACGAGGCTGAGCGGCAAGAAGAGGAGATGAGCGATTTGGAGAAAATCGATCGCGCTTTGAAGATCCAATTGGAGAAGAAAGCGGAAGAGCGAGAAGAGAAGAAGAGCGATTTGGAGAAAATCAATGGCGCTGTGAAGATTGAATCGGAGAAGAAAATCGATAGCGCCGTGGAGATTGAATCGGAGAACAAAACAGAGCAACGAGAAGAGAAGCAAATCAACGGCGATTTGAAGATTGAATCGGAGAACAAAATACAGCAACGAGAAGAGCAGAAAATCGACGGCGCTGTGAAGATTGGATCGGAGATCAAACCAGAGCAACAAGAAGAGAAGAAGAGCGAAATGGAGAAAATCGACAGCGAATCGGAGAAGAAACCAGAACAAGGCGCTGTGTCGGACGAAGGATTGAAAACAGAGGAGATAACCGGCGACGGCGAGAAGAAAGAGAAAGAGGACGGCGTTAATGGCGGTGCTGTTGAAAAACAGGTAATCGGAGAAACGAAAACGGAGGAGGATGCGGTTGTTAATGGCGATTCCGTTGAAAAACAGGTGATCGGAGAAACAAAAGCGGAGAAGGAGGCGGCTGTTAACGGCGGAGGAATTGAAGTAGAGCAGGAAATTGAAGCTGTTGAAGAGAAGAAATTGGCGGGAGAAATGAAGGTAGAGAAGGAGGGCGGCGACAATGGCGGCGTTGTTCAACAAGAAATGAAGGCTGTTGAGGAAAATAAATTTGCCGAAGAACTGAAAGTTGAGAAGGAAAATGGAGAGGAAGTGAAATTGAAAGAAGAAATTCCAGCTAAGATAGAAGAAGCAGCAGCTCCAATAGTCGAAGAAATTAAAATCTCAGCCGCTCCAGTACAGGACAAGAATTTGATACATGCCAAGGAAAATGCAGCAGATTTGGCAGTCAAGGTATCAACAGCAGAGGAAAAGAAATAG

Protein sequence

MGCGESKLAVATADGILGRKKSSASRKRSRKAAAAADGSSSGAESDVADLKIAPRKIDEEKADEAVKVESEPRGEKKTDGSVKVESENEAERQEEEMSDLEKIDRALKIQLEKKAEEREEKKSDLEKINGAVKIESEKKIDSAVEIESENKTEQREEKQINGDLKIESENKIQQREEQKIDGAVKIGSEIKPEQQEEKKSEMEKIDSESEKKPEQGAVSDEGLKTEEITGDGEKKEKEDGVNGGAVEKQVIGETKTEEDAVVNGDSVEKQVIGETKAEKEAAVNGGGIEVEQEIEAVEEKKLAGEMKVEKEGGDNGGVVQQEMKAVEENKFAEELKVEKENGEEVKLKEEIPAKIEEAAAPIVEEIKISAAPVQDKNLIHAKENAADLAVKVSTAEEKK

Homology

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BLAST of Sed0022025 vs. NCBI nr
Match: XP_022948567.1 (nucleolar protein 58-like [Cucurbita moschata])

HSP 1 Score: 240.4 bits (612), Expect = 2.8e-59
Identity = 209/446 (46.86%), Postives = 275/446 (61.66%), Query Frame = 0


Query: 1   MGCGESKLAVATADGILGRKKSSASRKRSRKAAAAADGSSSGAESDVADLKIAPRKIDEE 60
           MGCGESKLAVATADG L RKKSSASR +S +   A DGS SGA+  VADLK+   KID +
Sbjct: 1   MGCGESKLAVATADGSLPRKKSSASRTKSSR--KAVDGSKSGADLPVADLKVGEEKIDGD 60

Query: 61  ---KADEAVKVESEPRGE-KKTDGSVKVESENEAERQEEEMSDLEKIDRALKIQLEKKAE 120
              K+D  ++   E + + +K DGSVK+E++N+ E+QEE+ SD EKI+  +KI  E K E
Sbjct: 61  VKVKSDNKMEQRVEEKSDVQKIDGSVKIETKNKTEQQEEKKSDEEKINSTVKIDTENKTE 120

Query: 121 EREEKKSDLEKINGAVKIES-------------EKKIDSAVEIESENKTEQREEK----- 180
           ++E KKS  EKIN  VKI++             E+KI SAV+IE ENKTEQ+EEK     
Sbjct: 121 QQEAKKSVEEKINSTVKIDTENKTEQQEAKKSVEEKISSAVKIEPENKTEQQEEKNSDEE 180

Query: 181 QINGDLKIESENKIQQRE-----EQKIDGAVKIGSEIKPEQQEEKKSEMEKIDS----ES 240
           +IN  +KIES+NK +QRE     E+KI+ AVKI  E K EQ+EEKK+  EKI+S    E 
Sbjct: 181 KINSAVKIESKNKTEQREEKKNGEEKINSAVKIEPENKTEQREEKKNGEEKINSAVKIEP 240

Query: 241 EKKPEQGAVSDEG-------LKTEEITGDGEKKEKEDGVNGGAVEKQ------------V 300
           E K EQ      G       +K E      +++EK+   NG A E Q            +
Sbjct: 241 ENKTEQREEKKNGEEKINSAVKIEPENKTDQREEKKS--NGDAAEVQQVEKEVAKTENKI 300

Query: 301 IGETKTEEDAVVNGDSVEKQVIGETKAEKEAAVNGGGIEVEQEIEAVEEKKLAGEMKVEK 360
            G+ + +++ VVNG +VEKQV GETK EK+A VNGGGIEVEQ ++  +EK+LAGE K EK
Sbjct: 301 TGDGEKKKENVVNGGAVEKQVAGETKTEKDAVVNGGGIEVEQGVKPAKEKQLAGETKAEK 360

Query: 361 EGGDNGG-----VVQQEMKAVEENKFAEELKVEKENGEEVKLKEEIPAKIEEAAAPIVEE 392
           + G+N G     VV+Q +K VEE K AEE K+ +   E VK+KE   A+ + +  P++  
Sbjct: 361 KEGNNNGVAVVVVVEQVIKPVEEKKLAEEPKIGEGEKEAVKVKE--AAEAQSSGTPLL-- 420

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BLAST of Sed0022025 vs. NCBI nr
Match: XP_038902432.1 (histone-lysine N-methyltransferase, H3 lysine-79 specific-like [Benincasa hispida])

HSP 1 Score: 208.4 bits (529), Expect = 1.2e-49
Identity = 187/401 (46.63%), Postives = 231/401 (57.61%), Query Frame = 0


Query: 1   MGCGESKLAVATADGILGRKKSSASRKRSRKAAAAADGSSSGAESDVADLKI-APRKIDE 60
           MGCGESKLAVATADGIL RKKS A R +S +   +ADGS S A++ VADLK+ +  KIDE
Sbjct: 1   MGCGESKLAVATADGILHRKKSIAGRSKSGR--KSADGSKSSADAAVADLKVPSQNKIDE 60

Query: 61  EKADEAVKVESEPRGEKKTDGSVKVESENEAERQEEEMSDLEKIDRALKIQLEKKAEERE 120
           EK D AVK+ES                                         E K E+RE
Sbjct: 61  EKVDSAVKIES-----------------------------------------ENKIEQRE 120

Query: 121 EKKSDLEKINGAVKIESEKKIDSAVEIESENKTEQREEKQINGDLKIESENKIQQREEQK 180
           EKK D    + A KI+SEKKI  AV+IES        EK+I+G +K ES        E+K
Sbjct: 121 EKKID----DDAAKIKSEKKIHDAVKIES--------EKKIDGAVKSES--------EEK 180

Query: 181 IDGAVKIGSEIKPEQQEEKKSEMEKIDSESEKKPEQGAVSDEGLKTEEITGDGEKKEKED 240
           ID  V     +  E  + ++ + +++  +SEK            K +E TGD EKKEKE 
Sbjct: 181 IDSVVAEVQNVATEGGKTEERKEKEVTGDSEK------------KEKEATGDSEKKEKEG 240

Query: 241 GVNGGAVEKQVIGETKTEEDAVVN-GDSVEKQVIGETKAEKEAAVNGGGIEVEQEIEAVE 300
           G NGG+VEKQV GETK E++     G+ V +Q I   K  +E  + G   EVEQ I+ VE
Sbjct: 241 GDNGGSVEKQVAGETKAEKEKEKEAGEIVVEQKI---KPVEEKPLTG---EVEQGIKLVE 300

Query: 301 EKKLAGEMKVEKEGGDNGGVVQQEMKAVEENKFAEELKVEKENGEEVKLKEEIPAKIEEA 360
           EK+L GE K EK+   +GG V+Q  K  EE + AEE KVEK+NGE VKLKEE  AK EEA
Sbjct: 301 EKQLVGETKTEKK---DGGAVEQANKPAEEKQLAEEPKVEKQNGEAVKLKEETQAKKEEA 317

Query: 361 AAPIVEEIKISAAPVQDKNLIHAKENAADLAVKVSTAEEKK 400
           AAP VEE + SA P++DKN+   KENA DL VK STAEEKK
Sbjct: 361 AAPKVEETQSSATPLEDKNVKDPKENAVDLGVKDSTAEEKK 317

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BLAST of Sed0022025 vs. NCBI nr
Match: XP_023538936.1 (cilia- and flagella-associated protein 251-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 206.5 bits (524), Expect = 4.4e-49
Identity = 207/495 (41.82%), Postives = 269/495 (54.34%), Query Frame = 0


Query: 1   MGCGESKLAVATADGILGRKKSSASRKRSRKAAAAADGSSSGAESDVADLKIAPRKIDEE 60
           MGCGESKLAVATADG L RKKSSASR +S +   A DGS SGA+  VADLK+   KID +
Sbjct: 1   MGCGESKLAVATADGSLPRKKSSASRTKSSR--KAVDGSKSGADLPVADLKVGEEKIDGD 60

Query: 61  ---KADEAVKVESEPRGE-KKTDGSVKVESENEAERQEEEMSDLEKIDRALKIQLEKKAE 120
              K+D  ++   E + + +K DGSVK+E++N+ E+QEE+ SD EKI+ A+KI+ E K E
Sbjct: 61  VKVKSDNKMEQRVEEKSDVQKIDGSVKIETKNKPEQQEEKKSDEEKINSAVKIETENKTE 120

Query: 121 EREEKKSDLEKINGAVKIE----------------------------------------S 180
           ++E KKS  EKI+ AVKIE                                         
Sbjct: 121 QQEAKKSVEEKISSAVKIEPEIKTEQQEEKKSVEEKIISSAVKIEPVNKTEQQEEKKSVE 180

Query: 181 EKKIDSAVEIESENKTEQREEKQ------INGDLKIESENKIQQREEQK------IDGAV 240
           EK I SAV+IE  NKTEQ+EEK+      I+  +KIE  NK +Q+EE+K      I  AV
Sbjct: 181 EKIISSAVKIEPVNKTEQQEEKKSVEEKIISSAVKIEPVNKTEQQEEKKSVEEKIISSAV 240

Query: 241 KIGSEIKPEQQEEKKSEMEKIDS----ESEKKPEQGAVSDEG-------LKTEEITGDGE 300
           KI    K EQQEEKKS+ EKI+S    ES+ K EQ      G       +K E      +
Sbjct: 241 KIEPVNKTEQQEEKKSDEEKINSAVNIESKNKTEQREEKKNGEEKINSAVKIEPENKTEQ 300

Query: 301 KKEKEDG-----------------------VNGGA------------VEKQVIGETKTEE 360
           ++EK++G                        NG A             EK++ G+ + +E
Sbjct: 301 REEKKNGEEKINSAVKIEPENKTDQREEKKSNGDAAEVQQVEKEVAKTEKKITGDGEKKE 360

Query: 361 DAVVNGDSVEKQVIGETKAEKEAAVNGGGIEVEQEIEAVEEKKLAGEMKVEKEGGDNGG- 392
             VVNG +VEKQV GETK EK+A V GGGIEVEQ ++  +EK+LAGE K EK+ G N G 
Sbjct: 361 KDVVNGGTVEKQVAGETKTEKDAVVKGGGIEVEQGVKPAKEKQLAGETKDEKKEGSNNGV 420

[Close]

BLAST of Sed0022025 vs. NCBI nr
Match: KAE8650378.1 (hypothetical protein Csa_009605 [Cucumis sativus])

HSP 1 Score: 171.4 bits (433), Expect = 1.6e-38
Identity = 181/402 (45.02%), Postives = 224/402 (55.72%), Query Frame = 0


Query: 1   MGCGESKLAVATADGILGRKKSSASRKRSRKAAAAADGS-SSGAESDVADLKIAPRKIDE 60
           MGCGESKLA+ TADGIL RKKSSASR +S +   A DGS +S A S  ADLK+       
Sbjct: 1   MGCGESKLAIDTADGILHRKKSSASRSKSGR--RAGDGSKTSTAHSSSADLKVP----SL 60

Query: 61  EKADEAVKVESEPRGEKKTDGSVKVESENEAERQEEEMSDLEKIDRALKIQLEKKAEERE 120
            K D +VKVES               SEN+ E+++E     +KID   KI+ E K E   
Sbjct: 61  NKIDSSVKVES---------------SENKVEQRDE-----KKIDDVAKIEPEVKTE--- 120

Query: 121 EKKSDLEKINGAVKIESEKKIDSAVEIESENKTEQREEKQINGDLKIESENKIQQREEQK 180
                 +KI+ AVKIESE+K DS V  E   KTE+R+EK++ GD                
Sbjct: 121 ------QKIDAAVKIESEEKSDSIVVTEGV-KTEERKEKEVAGD---------------- 180

Query: 181 IDGAVKIGSEIKPEQQEEKKSEMEKIDSESEKKPEQGAVSDEGLKTEEITGDGEKKEKED 240
                            EKK   +++ S SEKK ++ A S E  K +E+    EKKE ED
Sbjct: 181 ----------------SEKKE--KEVASSSEKKEKEVASSSE-KKEKEVASSSEKKENED 240

Query: 241 GVNGGAVEKQVIGETKTEEDAVVNGDSVEKQVIGETKAEKEAAVNGGGIEVEQE-IEAVE 300
           G NGG+VEKQV GETK EE    +   VE+ V    K  +E  + G   EVE+E I+AVE
Sbjct: 241 GGNGGSVEKQVAGETKAEEKKEGSEVKVEQGV----KGVEEKLLAG---EVEKEGIKAVE 300

Query: 301 EKKLAGEMKVEKEGGDNGGVVQQEMKAVEENKFAEELKVEKENGEEVKLKEEIPAKIEEA 360
           +K++AGE K EK+    GG V++ +KA EE K AEE KVEK+NGE VKLKEE   K    
Sbjct: 301 KKEVAGETKTEKK---EGGAVEEGIKAAEEKKLAEEPKVEKQNGEAVKLKEESEGK---- 313

Query: 361 AAPIVEEIKISA-APVQDKNLIHAKENAADLAVKVSTAEEKK 400
                EE +ISA  P+QDKNL   KEN  DL VK ST EEKK
Sbjct: 361 ----KEETQISAPTPLQDKNLKDPKENGGDLEVKNSTTEEKK 313

[Close]

BLAST of Sed0022025 vs. NCBI nr
Match: XP_004134472.3 (histone-lysine N-methyltransferase, H3 lysine-79 specific [Cucumis sativus])

HSP 1 Score: 171.4 bits (433), Expect = 1.6e-38
Identity = 181/402 (45.02%), Postives = 224/402 (55.72%), Query Frame = 0


Query: 1   MGCGESKLAVATADGILGRKKSSASRKRSRKAAAAADGS-SSGAESDVADLKIAPRKIDE 60
           MGCGESKLA+ TADGIL RKKSSASR +S +   A DGS +S A S  ADLK+       
Sbjct: 83  MGCGESKLAIDTADGILHRKKSSASRSKSGR--RAGDGSKTSTAHSSSADLKVP----SL 142

Query: 61  EKADEAVKVESEPRGEKKTDGSVKVESENEAERQEEEMSDLEKIDRALKIQLEKKAEERE 120
            K D +VKVES               SEN+ E+++E     +KID   KI+ E K E   
Sbjct: 143 NKIDSSVKVES---------------SENKVEQRDE-----KKIDDVAKIEPEVKTE--- 202

Query: 121 EKKSDLEKINGAVKIESEKKIDSAVEIESENKTEQREEKQINGDLKIESENKIQQREEQK 180
                 +KI+ AVKIESE+K DS V  E   KTE+R+EK++ GD                
Sbjct: 203 ------QKIDAAVKIESEEKSDSIVVTEGV-KTEERKEKEVAGD---------------- 262

Query: 181 IDGAVKIGSEIKPEQQEEKKSEMEKIDSESEKKPEQGAVSDEGLKTEEITGDGEKKEKED 240
                            EKK   +++ S SEKK ++ A S E  K +E+    EKKE ED
Sbjct: 263 ----------------SEKKE--KEVASSSEKKEKEVASSSE-KKEKEVASSSEKKENED 322

Query: 241 GVNGGAVEKQVIGETKTEEDAVVNGDSVEKQVIGETKAEKEAAVNGGGIEVEQE-IEAVE 300
           G NGG+VEKQV GETK EE    +   VE+ V    K  +E  + G   EVE+E I+AVE
Sbjct: 323 GGNGGSVEKQVAGETKAEEKKEGSEVKVEQGV----KGVEEKLLAG---EVEKEGIKAVE 382

Query: 301 EKKLAGEMKVEKEGGDNGGVVQQEMKAVEENKFAEELKVEKENGEEVKLKEEIPAKIEEA 360
           +K++AGE K EK+    GG V++ +KA EE K AEE KVEK+NGE VKLKEE   K    
Sbjct: 383 KKEVAGETKTEKK---EGGAVEEGIKAAEEKKLAEEPKVEKQNGEAVKLKEESEGK---- 395

Query: 361 AAPIVEEIKISA-APVQDKNLIHAKENAADLAVKVSTAEEKK 400
                EE +ISA  P+QDKNL   KEN  DL VK ST EEKK
Sbjct: 443 ----KEETQISAPTPLQDKNLKDPKENGGDLEVKNSTTEEKK 395

[Close]

BLAST of Sed0022025 vs. ExPASy TrEMBL
Match: A0A6J1G9L1 (nucleolar protein 58-like OS=Cucurbita moschata OX=3662 GN=LOC111452179 PE=4 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 1.3e-59
Identity = 209/446 (46.86%), Postives = 275/446 (61.66%), Query Frame = 0


Query: 1   MGCGESKLAVATADGILGRKKSSASRKRSRKAAAAADGSSSGAESDVADLKIAPRKIDEE 60
           MGCGESKLAVATADG L RKKSSASR +S +   A DGS SGA+  VADLK+   KID +
Sbjct: 1   MGCGESKLAVATADGSLPRKKSSASRTKSSR--KAVDGSKSGADLPVADLKVGEEKIDGD 60

Query: 61  ---KADEAVKVESEPRGE-KKTDGSVKVESENEAERQEEEMSDLEKIDRALKIQLEKKAE 120
              K+D  ++   E + + +K DGSVK+E++N+ E+QEE+ SD EKI+  +KI  E K E
Sbjct: 61  VKVKSDNKMEQRVEEKSDVQKIDGSVKIETKNKTEQQEEKKSDEEKINSTVKIDTENKTE 120

Query: 121 EREEKKSDLEKINGAVKIES-------------EKKIDSAVEIESENKTEQREEK----- 180
           ++E KKS  EKIN  VKI++             E+KI SAV+IE ENKTEQ+EEK     
Sbjct: 121 QQEAKKSVEEKINSTVKIDTENKTEQQEAKKSVEEKISSAVKIEPENKTEQQEEKNSDEE 180

Query: 181 QINGDLKIESENKIQQRE-----EQKIDGAVKIGSEIKPEQQEEKKSEMEKIDS----ES 240
           +IN  +KIES+NK +QRE     E+KI+ AVKI  E K EQ+EEKK+  EKI+S    E 
Sbjct: 181 KINSAVKIESKNKTEQREEKKNGEEKINSAVKIEPENKTEQREEKKNGEEKINSAVKIEP 240

Query: 241 EKKPEQGAVSDEG-------LKTEEITGDGEKKEKEDGVNGGAVEKQ------------V 300
           E K EQ      G       +K E      +++EK+   NG A E Q            +
Sbjct: 241 ENKTEQREEKKNGEEKINSAVKIEPENKTDQREEKKS--NGDAAEVQQVEKEVAKTENKI 300

Query: 301 IGETKTEEDAVVNGDSVEKQVIGETKAEKEAAVNGGGIEVEQEIEAVEEKKLAGEMKVEK 360
            G+ + +++ VVNG +VEKQV GETK EK+A VNGGGIEVEQ ++  +EK+LAGE K EK
Sbjct: 301 TGDGEKKKENVVNGGAVEKQVAGETKTEKDAVVNGGGIEVEQGVKPAKEKQLAGETKAEK 360

Query: 361 EGGDNGG-----VVQQEMKAVEENKFAEELKVEKENGEEVKLKEEIPAKIEEAAAPIVEE 392
           + G+N G     VV+Q +K VEE K AEE K+ +   E VK+KE   A+ + +  P++  
Sbjct: 361 KEGNNNGVAVVVVVEQVIKPVEEKKLAEEPKIGEGEKEAVKVKE--AAEAQSSGTPLL-- 420

[Close]

BLAST of Sed0022025 vs. ExPASy TrEMBL
Match: A0A0A0L8Y3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G152040 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 1.4e-37
Identity = 177/402 (44.03%), Postives = 217/402 (53.98%), Query Frame = 0


Query: 1   MGCGESKLAVATADGILGRKKSSASRKRSRKAAAAADGS-SSGAESDVADLKIAPRKIDE 60
           MGCGESKLA+ TADGIL RKKSSASR +S +   A DGS +S A S  ADLK+       
Sbjct: 101 MGCGESKLAIDTADGILHRKKSSASRSKSGR--RAGDGSKTSTAHSSSADLKVP----SL 160

Query: 61  EKADEAVKVESEPRGEKKTDGSVKVESENEAERQEEEMSDLEKIDRALKIQLEKKAEERE 120
            K D +VKVES               SEN+ E+++E     +KID   KI+ E K E   
Sbjct: 161 NKIDSSVKVES---------------SENKVEQRDE-----KKIDDVAKIEPEVKTE--- 220

Query: 121 EKKSDLEKINGAVKIESEKKIDSAVEIESENKTEQREEKQINGDLKIESENKIQQREEQK 180
                 +KI+ AVKIESE+K DS V  E   KTE+R+EK++ GD                
Sbjct: 221 ------QKIDAAVKIESEEKSDSIVVTEGV-KTEERKEKEVAGD---------------- 280

Query: 181 IDGAVKIGSEIKPEQQEEKKSEMEKIDSESEKKPEQGAVSDEGLKTEEITGDGEKKEKED 240
                                        SEKK ++ A S E  K +E+    EKKE ED
Sbjct: 281 -----------------------------SEKKEKEVASSSE-KKEKEVASSSEKKENED 340

Query: 241 GVNGGAVEKQVIGETKTEEDAVVNGDSVEKQVIGETKAEKEAAVNGGGIEVEQE-IEAVE 300
           G NGG+VEKQV GETK EE    +   VE+ V    K  +E  + G   EVE+E I+AVE
Sbjct: 341 GGNGGSVEKQVAGETKAEEKKEGSEVKVEQGV----KGVEEKLLAG---EVEKEGIKAVE 400

Query: 301 EKKLAGEMKVEKEGGDNGGVVQQEMKAVEENKFAEELKVEKENGEEVKLKEEIPAKIEEA 360
           +K++AGE K EK+    GG V++ +KA EE K AEE KVEK+NGE VKLKEE   K    
Sbjct: 401 KKEVAGETKTEKK---EGGAVEEGIKAAEEKKLAEEPKVEKQNGEAVKLKEESEGK---- 402

Query: 361 AAPIVEEIKISA-APVQDKNLIHAKENAADLAVKVSTAEEKK 400
                EE +ISA  P+QDKNL   KEN  DL VK ST EEKK
Sbjct: 461 ----KEETQISAPTPLQDKNLKDPKENGGDLEVKNSTTEEKK 402

[Close]

BLAST of Sed0022025 vs. ExPASy TrEMBL
Match: A0A5A7U7H3 (DNA ligase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G00520 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 5.5e-37
Identity = 167/404 (41.34%), Postives = 221/404 (54.70%), Query Frame = 0


Query: 1   MGCGESKLAVATADGILGRKKSSASRKRSRKAAAAADGSSSG-AESDVADLKIAPRKIDE 60
           MGCGESKLA++TADGIL RKKSSAS  RS+  + AADGS +G A+S VADLK+       
Sbjct: 1   MGCGESKLAISTADGILHRKKSSAS--RSKSGSRAADGSKTGAADSSVADLKV------- 60

Query: 61  EKADEAVKVESEPRGEKKTDGSVKVESENEAERQEEEMSDLEKIDRALKI--QLEKKAEE 120
                                                   L KID +LK+    E K E+
Sbjct: 61  --------------------------------------PSLNKIDSSLKVVESSENKVEQ 120

Query: 121 REEKK-SDLEKINGAVKIESEKKIDSAVEIESENKTEQREEKQINGDLKIESENKIQQRE 180
            +EKK  D+ K    VKI  E+KID+AV+ E   KTE++ EK++ GD            E
Sbjct: 121 LDEKKIDDVAKTEPEVKI--EQKIDAAVKTEGV-KTEEKREKEVAGD-----------NE 180

Query: 181 EQKIDGAVKIGSEIKPEQQEEKKSEMEKIDSESEKKPEQGAVSDEGLKTEEITGDGEKKE 240
           ++++ G              EKK + +++  +SEKK ++ +   E  K +E++G GEKKE
Sbjct: 181 KKEVAG------------DSEKKEKEKEVAGDSEKKEKEVSGGSE-KKEKEVSGGGEKKE 240

Query: 241 KEDGVNGGAVEKQVIGETKTEEDAVVNGDSVEKQVIGETKAEKEAAVNGGGIEVEQEIEA 300
           KEDG NGG+VEKQV GETK EE         E +V+ +     E    GG +E +  I+A
Sbjct: 241 KEDGGNGGSVEKQVAGETKAEEKKEDGVKGSEVKVVEQGVKAVEEKPLGGEVE-KAGIKA 300

Query: 301 VEEKKLAGE-MKVEKEGGDNGGVVQQEMKAVEENKFAEELKVEKENGEEVKLKEEIPAKI 360
            ++K++AGE +K EK+    GG V++ +KA EE K AEE KVEK+NGE VKLKEE  AK 
Sbjct: 301 ADKKEVAGETIKTEKK---EGGAVEEGIKAAEEKKLAEEPKVEKQNGEAVKLKEESEAKK 319

Query: 361 EEAAAPIVEEIKISAAPVQDKNLIHAKENAADLAVKVSTAEEKK 400
           EE  +        +  P+QDKNL   KEN  DL VK STAEEKK
Sbjct: 361 EETQSS-------APTPLQDKNLKDPKENGGDLGVKNSTAEEKK 319

[Close]

BLAST of Sed0022025 vs. ExPASy TrEMBL
Match: A0A1S3AXZ0 (DNA ligase 1-like OS=Cucumis melo OX=3656 GN=LOC103483804 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 1.6e-36
Identity = 168/406 (41.38%), Postives = 214/406 (52.71%), Query Frame = 0


Query: 1   MGCGESKLAVATADGILGRKKSSASRKRSRKAAAAADGSSSG-AESDVADLKIAPRKIDE 60
           MGCGESKLA++TADGIL RKKSSAS  RS+  + AADGS +G A+S VADLK+       
Sbjct: 1   MGCGESKLAISTADGILHRKKSSAS--RSKSGSRAADGSKTGAADSSVADLKV------- 60

Query: 61  EKADEAVKVESEPRGEKKTDGSVKVESENEAERQEEEMSDLEKIDRALKIQLEKKAEERE 120
                                                   L KID +LK+          
Sbjct: 61  --------------------------------------PSLNKIDSSLKV---------- 120

Query: 121 EKKSDLEKINGAVKIESEKKIDSAVEIESENKTEQREEKQINGDLKIESENKIQQREEQK 180
                         +ES           SENK EQR+EK+I+   K E E KI    EQK
Sbjct: 121 --------------VES-----------SENKVEQRDEKKIDDVAKTEPEVKI----EQK 180

Query: 181 IDGAVKIGSEIKPEQQEEKK----SEMEKIDSESEKKPEQGAVSDEGLKTE-EITGDGEK 240
           ID AVK    +K E++ EK+    +E +++  +SEKK ++  VS    K E E++  GEK
Sbjct: 181 IDAAVKT-EGVKTEEKREKEVAGDNEKKEVAGDSEKKEKEKEVSGGSEKKEKEVSAGGEK 240

Query: 241 KEKEDGVNGGAVEKQVIGETKTEEDAVVNGDSVEKQVIGETKAEKEAAVNGGGIEVEQEI 300
           KEKEDG NGG+VEKQV GETK EE         E +V+ +     E    GG +E +  I
Sbjct: 241 KEKEDGGNGGSVEKQVAGETKAEEKKEDGVKGSEVKVVEQGVKAVEEKPLGGEVE-KAGI 300

Query: 301 EAVEEKKLAGE-MKVEKEGGDNGGVVQQEMKAVEENKFAEELKVEKENGEEVKLKEEIPA 360
           +A ++K++AGE +K EK+    GG V++ +KA EE K AEE KVEK+NGE VKLKEE  A
Sbjct: 301 KAADKKEVAGETIKTEKK---EGGAVEEGIKAAEEKKLAEEPKVEKQNGEAVKLKEESEA 308

Query: 361 KIEEAAAPIVEEIKISAAPVQDKNLIHAKENAADLAVKVSTAEEKK 400
           K EE  +        +  P+QDKNL   KEN  DL VK STAEEKK
Sbjct: 361 KKEETQSS-------APTPLQDKNLKDPKENGGDLGVKNSTAEEKK 308

[Close]

BLAST of Sed0022025 vs. ExPASy TrEMBL
Match: A0A6J1IC75 (golgin subfamily A member 6-like protein 22 OS=Cucurbita maxima OX=3661 GN=LOC111472332 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 2.0e-31
Identity = 179/450 (39.78%), Postives = 246/450 (54.67%), Query Frame = 0


Query: 1   MGCGESKLAVATADGILGRKKSSASRKRSRKAAAAADGSSSGAESDVADLKIAPRKIDEE 60
           MGCGESKLAVATADG L RKKSSA  KR++ +  A DGS SGA+  VADL     K DEE
Sbjct: 1   MGCGESKLAVATADGSLPRKKSSA--KRTKSSRKAVDGSKSGADLPVADL-----KTDEE 60

Query: 61  KADEAVKVESEPRGE---------KKTDGSVKVESENEAERQEEEMSDLEKIDRALKIQL 120
           K D  VKV+ + + E         +K DGSVK E++N+ E+QEE+ +D EKI+ A+KI+ 
Sbjct: 61  KIDGDVKVKLDNKREQRVEEKSDVQKIDGSVKNETKNKTEQQEEKKTDEEKINSAVKIET 120

Query: 121 EKKAEEREEKKSDLEKINGAVKIE-------------SEKKIDSAVEIESENKTEQREEK 180
           E K E++E KKS  EKI+ AVKIE              E+KI+SAV+IE E KTEQ+EEK
Sbjct: 121 ENKTEQQEAKKSVEEKISSAVKIEPENKTEQQKEKKSDEEKINSAVKIEPEKKTEQQEEK 180

Query: 181 -----QINGDLKIESENKIQQREE-----QKIDGAVKIGSEIKPEQQEEKKSEMEKIDSE 240
                +IN  ++IE ENK +Q+EE     +KI+ A KI  E K EQQEEKKS+ EKI+S 
Sbjct: 181 KSDEEKINSAVRIEPENKTEQQEEKKSDQEKINSAAKIEPENKTEQQEEKKSDEEKINSA 240

Query: 241 SEKKPEQGAVSDEGLKTEEITGDGEKKEKEDGVNGGA-------VEKQVIGETKTEEDAV 300
            + +PE         KTE+     EKK  E+ +N           E+Q   E K++E+ +
Sbjct: 241 VKIEPEN--------KTEQ---QEEKKSDEEKINSAVKIEPENKTEQQ--EEKKSDEEKI 300

Query: 301 VNGDSVEKQVIGETKAEK---EAAVNGG-GIEVEQEIEAVEEK-----KLAGEMKVEKEG 360
            +   +E +   E + EK   E  +N    IE E + E  EEK     K+   +K+E E 
Sbjct: 301 NSAVRIEPENKPEQQEEKKSDEEKINSAVKIEPENKTEQQEEKKSDEEKINSAVKIEPEN 360

Query: 361 GDNGGVVQQEMKAVEENKFAEELKVEKENGEEVKLKEEIPAKIEEAAAPIVEEIKISAAP 400
                  QQE K  +E K    +K+E EN  + + +EE  +  E+  + +  E +     
Sbjct: 361 KTE----QQEEKKSDEEKINSAVKIEPEN--KTEQQEEKKSDEEKINSAVKIEPENKTEQ 420

The following BLAST results are available for this feature:

BLAST of Sed0022025 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022948567.1	2.8e-59	46.86	nucleolar protein 58-like [Cucurbita moschata]	[more]
XP_038902432.1	1.2e-49	46.63	histone-lysine N-methyltransferase, H3 lysine-79 specific-like [Benincasa hispid...	[more]
XP_023538936.1	4.4e-49	41.82	cilia- and flagella-associated protein 251-like [Cucurbita pepo subsp. pepo]	[more]
KAE8650378.1	1.6e-38	45.02	hypothetical protein Csa_009605 [Cucumis sativus]	[more]
XP_004134472.3	1.6e-38	45.02	histone-lysine N-methyltransferase, H3 lysine-79 specific [Cucumis sativus]	[more]

BLAST of Sed0022025 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0022025 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G9L1	1.3e-59	46.86	nucleolar protein 58-like OS=Cucurbita moschata OX=3662 GN=LOC111452179 PE=4 SV=...	[more]
A0A0A0L8Y3	1.4e-37	44.03	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G152040 PE=4 SV=1	[more]
A0A5A7U7H3	5.5e-37	41.34	DNA ligase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G00...	[more]
A0A1S3AXZ0	1.6e-36	41.38	DNA ligase 1-like OS=Cucumis melo OX=3656 GN=LOC103483804 PE=4 SV=1	[more]
A0A6J1IC75	2.0e-31	39.78	golgin subfamily A member 6-like protein 22 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]

BLAST of Sed0022025 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 83..131
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 49..243
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..267

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0022025.1	Sed0022025.1	mRNA