Sed0021983 (gene) Chayote v1

Overview


Name	Sed0021983
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Ras-related protein
Location	LG14: 19912893 .. 19916418 (-)
RNA-Seq Expression	Sed0021983
Synteny	Sed0021983

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTCGTCATCGTTGGCGGTTTCTTCTCCGCACCCGGAGAGAAACAACGAACTTCCAGAAACCCCAATTCCATATCATTTACACCCCACGATCCTGCCTTTCTTTCTCTAATAATTTCTTTCAATTTACTTTTTCCTTTCATGGCGACGGTTTCTCCTCTCGCCAAGTACAAGCTCGTCTTCCTCGGCGACCAATCCGTCGGCAAAACCAGCATCATCACCCGCTTCATGTACGACAAGTTCGACACCACCTATCAGGTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCATTTTCTCTATTTCCATGTTCGATTCCGATCATACAATAGCGATTTCATTTCTCTGTTATCTTATGTCTCTCAAAATTCTTTGGTGGATCTGATTATGTATCGCGCTGTTTGGAATACGCAGACTCGATTACGTTTTTCAATTTCATCATCGATTCGTGTTTATTAATCTGTTTTTGCGATCGATTTGAATTATTGAATGATATGTAGATTACCTTTCTGATTCGTGGCGCCGGACATTCTTTCTGCGTCTTGTATGGATGCGATGTAGAAATTTTAAAAAAAAATTCAAATGTAGCGAAAATTGATTCAATCAGGTTATCAATGGCTTCTATCTGAATCAATTTAAACGGATTCAGAACGATCTAATTGAAATTGATTCAAAACAATGAAACATCAAATATTATGTTGTTTACAAAATATCTTTTAGAAATAGTTACGGTTAGAATAGGATGCTCGAATTTGTTATCTACGATAAATTTCCAACAAAAGCTACTTAGAATAGGGGAAAGTGCTTTGGAATAGGGTTGACTTTATTACAAGTAATTTACCCCTATTCTGGAATTTGTTATCTACGACAAATTTCCAATAAAACTACATAGAATAGGTGAAATTACTTGTAATAGGGTTGACTTTATGCACTGGATTATCTGCTGTTCATTCAATTAGAGGGATGGTTCGTGCCTTAATTTACGAAAATGTATTTCGGGGCTTGGTATTTTGAATCATTCAAACCTTAATTGTGTGTTGGCTGTACATTTTTCATCCTTACATTGTTAGGGACTCCCTTCTTTGTGCTGAAATAAATTTTGATGCAGGCTACCATTGGAATCGACTTTTTGTCCAAAACAATGTACCTTGAAGATCGAACAATTCGGTTGCAGCTTTGGTATGATATGTTTATTTCATTCCTGCCAATTAATAAAGATTGTTTACCTATCTGATCTTGTTTCGGCATACAGACTTTATAGTAACAATTCTGGTTCTTTTCAATACAATGTAGATTTCTGATTCTATTCCTTCTGATATAAACATACATTGATATAAATCCTACTCAATTGTTATAAACACAGATGGGATACCCTAAACTTTTTTTCTTCTTTTGGATGCACTGGTTTGGAGAGAGTTTACAATTAAATTGGCTAGAGAAAGCTGATACAACATGTCAATTTGACTTTACAAATTATTTGTCGATTTAAATAATCGAACGAGACATTTTTGTGTTTGCTGTTATGTGTATGGCTTTTTTCTTTTTTATAAAACTTGAATGACTCTTGTTCCACAGGGATACTGCTGGACAAGAAAGATTTAGGAGTCTCATTCCAAGTTACATAAGAGATTCCTCTGTTGCAGTAGTAGTCTATGACGTATCAAGTTAGTACTCCCTATCCCGTATCAGTCCGTTTGTCGTTTGATGCATCTCAGTTAGTTGTACTTGATGTGCTAATTACTTTGGTATGAAAACCTTATTATGCAGATAGAATATCATTCTTGAATACTACCAAGTGGATTGAGGAGGTACGAACAGAAAGGGGCAGTGATGTGATCATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGATAAAAGGTGAGAAATGATTTTTATCGTGAACATATTTGATATTGTCGAGAAAAAATGAGCGAACTGCTCCTGTTATTTTTCCGTATCTATTAAGATCAGTATTGTACTTGAAGATCATAGTAAATAGCCAGGTGGTTGAGTCTAATCTTCTTCGATCTTTTAGAAGGTTGAAAGCTGCATTATTAGCATGATTTCTGAGTACTCTTTCTAGTACCACATACCCTATAAAGAGAATACTACTACTCTCAAATAAATGAGAGCCAAATATTGATTCTCTGGATCAAACCCATGACCATGATGTTAAACTGGACTACCACCAAACAATGCAACCATCAGACCACCGTCCTTTTCGGTCTCAAGATCTAAGCTTCTAATCCTATGATAGTGTGTAAAAATAATTTTGTGCTTGGTTGCTATATTCATATTTGTAACTGATCTAAAGTCTGCTAGTCTATTGAAAACCTTGTCCATTTTTGGACAGTTCTCTAAATTTTGTTTGCTTCGTGAGTAAATCAGGCAAGTTTCAATAGATGAAGGTGATGCCAAATCTCGTGATTCTGGAGTCATGTTTATAGAAACCAGTGCCAGAGCTGGATTCAACATCAAGGTAACGTTATTCTTTGATTTCTGAAACGTAAAATTACAAAAATTTAGTACTCTTTCGTTCTCAAAGCACGAAATTTCGCATCCTTGCTAAATTTGGAGTTTGTTTCTTCTCTTTGACTGGTCTGTATAGATGTAGTTTTGAGTCTTTTGACTCGCATTTTATTATTAGATAGCATAGCTTCAATCTCAAAATCTCATTGCCAGAGAAAGGAGTCGCCCCACCTTTCATATAAAGGTTGTGAGACCTCCTCACTTTTTTAACATGAGATCCTCAACGTGCCCCTCAAGATAATAGTTTTTTAGGTTCATTAATCTTGTATCGGATTTCAATTTCATTTTTATTAGCCTAAATACTCGTTTGAGTTTGATGGATTCTTTATCATATTAGATAACATGGATCATGATGTTCCATCTTCAAAACTAATTGATAATGAGGGGAACAATCACCTTTCTTATCAAAGTTGCGAGACCTATAACTTTTCTAACGTGAGATCTTTAATGAAACTGTTAAATTATGTTCAACTACCAATCAACCCAAAAGCTTAAGCTCGTGGAAATTTAATCATATTGGGGATGAAAATGATTCGGCAAAAATTCAAACTCAGAACCTCCTGTTCTAGTACTATGTTAAATTATGTTAAACCACCAATCAATCCAAAAGTTTAAGCTCGTAATTTGGAGTAAATTTAGTCATATCAACTAACAGAAACAAATAAAAAAAAGTTGCGAGACATGCCACTTTTCTAACTTGGGATCCTTAACATCGAAACGAATTTTGCAGCCTCTGTTTCGGAAGATAGCTGCAGCGCTGCCGGGGATGGAAACTCTTTCTTCTACAAGACACGAGGACATGGTAGACGTAAACTTGAAACCTCCAGTGAATTCATCCCAGACGGAACAGCAAGGAGGAGGTTGTGCATGCTAGAAGAAGATATGTAAGTTCATGAATACATATGAAAAATGCTTCAGAAATGGAATAGTAAAAGCAATCATTCACCGTTCAACAAATATTGACATTCATAATTTTCTAACCATATGATATTTGCA

mRNA sequence

GTTCGTCATCGTTGGCGGTTTCTTCTCCGCACCCGGAGAGAAACAACGAACTTCCAGAAACCCCAATTCCATATCATTTACACCCCACGATCCTGCCTTTCTTTCTCTAATAATTTCTTTCAATTTACTTTTTCCTTTCATGGCGACGGTTTCTCCTCTCGCCAAGTACAAGCTCGTCTTCCTCGGCGACCAATCCGTCGGCAAAACCAGCATCATCACCCGCTTCATGTACGACAAGTTCGACACCACCTATCAGGCTACCATTGGAATCGACTTTTTGTCCAAAACAATGTACCTTGAAGATCGAACAATTCGGTTGCAGCTTTGGGATACTGCTGGACAAGAAAGATTTAGGAGTCTCATTCCAAGTTACATAAGAGATTCCTCTGTTGCAGTAGTAGTCTATGACGTATCAAATAGAATATCATTCTTGAATACTACCAAGTGGATTGAGGAGGTACGAACAGAAAGGGGCAGTGATGTGATCATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGATAAAAGGCAAGTTTCAATAGATGAAGGTGATGCCAAATCTCGTGATTCTGGAGTCATGTTTATAGAAACCAGTGCCAGAGCTGGATTCAACATCAAGCCTCTGTTTCGGAAGATAGCTGCAGCGCTGCCGGGGATGGAAACTCTTTCTTCTACAAGACACGAGGACATGGTAGACGTAAACTTGAAACCTCCAGTGAATTCATCCCAGACGGAACAGCAAGGAGGAGGTTGTGCATGCTAGAAGAAGATATGTAAGTTCATGAATACATATGAAAAATGCTTCAGAAATGGAATAGTAAAAGCAATCATTCACCGTTCAACAAATATTGACATTCATAATTTTCTAACCATATGATATTTGCA

Coding sequence (CDS)

ATGGCGACGGTTTCTCCTCTCGCCAAGTACAAGCTCGTCTTCCTCGGCGACCAATCCGTCGGCAAAACCAGCATCATCACCCGCTTCATGTACGACAAGTTCGACACCACCTATCAGGCTACCATTGGAATCGACTTTTTGTCCAAAACAATGTACCTTGAAGATCGAACAATTCGGTTGCAGCTTTGGGATACTGCTGGACAAGAAAGATTTAGGAGTCTCATTCCAAGTTACATAAGAGATTCCTCTGTTGCAGTAGTAGTCTATGACGTATCAAATAGAATATCATTCTTGAATACTACCAAGTGGATTGAGGAGGTACGAACAGAAAGGGGCAGTGATGTGATCATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGATAAAAGGCAAGTTTCAATAGATGAAGGTGATGCCAAATCTCGTGATTCTGGAGTCATGTTTATAGAAACCAGTGCCAGAGCTGGATTCAACATCAAGCCTCTGTTTCGGAAGATAGCTGCAGCGCTGCCGGGGATGGAAACTCTTTCTTCTACAAGACACGAGGACATGGTAGACGTAAACTTGAAACCTCCAGTGAATTCATCCCAGACGGAACAGCAAGGAGGAGGTTGTGCATGCTAG

Protein sequence

MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVSNRISFLNTTKWIEEVRTERGSDVIIVLVGNKTDLVDKRQVSIDEGDAKSRDSGVMFIETSARAGFNIKPLFRKIAAALPGMETLSSTRHEDMVDVNLKPPVNSSQTEQQGGGCAC

Homology

[Close]

BLAST of Sed0021983 vs. NCBI nr
Match: XP_022950086.1 (ras-related protein RABH1e [Cucurbita moschata] >XP_022950088.1 ras-related protein RABH1e [Cucurbita moschata] >XP_023544710.1 ras-related protein RABH1e [Cucurbita pepo subsp. pepo] >XP_038882516.1 ras-related protein RABH1e [Benincasa hispida] >KAG6604034.1 Ras-related protein RABH1e, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034199.1 Ras-related protein RABH1e, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 390.2 bits (1001), Expect = 1.1e-104
Identity = 199/207 (96.14%), Postives = 203/207 (98.07%), Query Frame = 0


Query: 1   MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTIRL 60
           MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTIRL
Sbjct: 1   MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTIRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVSNRISFLNTTKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVSNR SFLNTTKWIEEVRTERGSDVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVSNRQSFLNTTKWIEEVRTERGSDVIIVLV 120

Query: 121 GNKTDLVDKRQVSIDEGDAKSRDSGVMFIETSARAGFNIKPLFRKIAAALPGMETLSSTR 180
           GNKTDLV+KRQVSI+EGDAKSR+ GVMFIETSA+AGFNIKPLFRKIAAALPGMETLSSTR
Sbjct: 121 GNKTDLVEKRQVSIEEGDAKSREFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTR 180

Query: 181 HEDMVDVNLKPPVNSSQTEQQGGGCAC 208
            EDMVDVNLKP VNSSQTEQQGGGCAC
Sbjct: 181 QEDMVDVNLKPAVNSSQTEQQGGGCAC 207

[Close]

BLAST of Sed0021983 vs. NCBI nr
Match: XP_023003400.1 (ras-related protein RABH1e [Cucurbita maxima])

HSP 1 Score: 389.8 bits (1000), Expect = 1.5e-104
Identity = 199/207 (96.14%), Postives = 202/207 (97.58%), Query Frame = 0


Query: 1   MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTIRL 60
           MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTIRL
Sbjct: 1   MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTIRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVSNRISFLNTTKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVSNR SFLNTTKWIEEVRTERGSDVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVSNRQSFLNTTKWIEEVRTERGSDVIIVLV 120

Query: 121 GNKTDLVDKRQVSIDEGDAKSRDSGVMFIETSARAGFNIKPLFRKIAAALPGMETLSSTR 180
           GNKTDLVDKRQVSI+EGDAKSR+ GVMFIETSA+AGFNIKPLFRKIAAALPGMETLSSTR
Sbjct: 121 GNKTDLVDKRQVSIEEGDAKSREFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTR 180

Query: 181 HEDMVDVNLKPPVNSSQTEQQGGGCAC 208
            EDMVDVNLKP VNSS TEQQGGGCAC
Sbjct: 181 QEDMVDVNLKPAVNSSHTEQQGGGCAC 207

[Close]

BLAST of Sed0021983 vs. NCBI nr
Match: XP_004143465.1 (ras-related protein RABH1e [Cucumis sativus] >XP_008440593.1 PREDICTED: ras-related protein RABH1e [Cucumis melo] >KGN48748.1 hypothetical protein Csa_004231 [Cucumis sativus])

HSP 1 Score: 388.7 bits (997), Expect = 3.2e-104
Identity = 198/207 (95.65%), Postives = 203/207 (98.07%), Query Frame = 0


Query: 1   MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTIRL 60
           MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTIRL
Sbjct: 1   MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTIRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVSNRISFLNTTKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVSNR SFLNTTKWIEEVRTERGSDVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVSNRQSFLNTTKWIEEVRTERGSDVIIVLV 120

Query: 121 GNKTDLVDKRQVSIDEGDAKSRDSGVMFIETSARAGFNIKPLFRKIAAALPGMETLSSTR 180
           GNKTDLV+KRQVSI+EGDAKSR+ GVMFIETSA+AGFNIKPLFRKIAAALPGMETLSSTR
Sbjct: 121 GNKTDLVEKRQVSIEEGDAKSREFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTR 180

Query: 181 HEDMVDVNLKPPVNSSQTEQQGGGCAC 208
            EDMVDVNLKP VNSSQ+EQQGGGCAC
Sbjct: 181 QEDMVDVNLKPAVNSSQSEQQGGGCAC 207

[Close]

BLAST of Sed0021983 vs. NCBI nr
Match: XP_022962792.1 (ras-related protein RABH1e-like [Cucurbita moschata] >XP_022978564.1 ras-related protein RABH1e-like [Cucurbita maxima] >XP_022978565.1 ras-related protein RABH1e-like [Cucurbita maxima] >XP_022978566.1 ras-related protein RABH1e-like [Cucurbita maxima] >XP_023518571.1 ras-related protein RABH1e-like [Cucurbita pepo subsp. pepo] >KAG6594882.1 Ras-related protein RABH1e, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026847.1 Ras-related protein RABH1e, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 388.3 bits (996), Expect = 4.2e-104
Identity = 198/207 (95.65%), Postives = 202/207 (97.58%), Query Frame = 0


Query: 1   MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTIRL 60
           MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTIRL
Sbjct: 1   MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTIRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVSNRISFLNTTKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVSNR SFLNTTKWIEEVRTERGSDVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVSNRQSFLNTTKWIEEVRTERGSDVIIVLV 120

Query: 121 GNKTDLVDKRQVSIDEGDAKSRDSGVMFIETSARAGFNIKPLFRKIAAALPGMETLSSTR 180
           GNKTDLV+KRQVSI+EGDAKSR+ GVMFIETSA+AGFNIKPLFRKIAAALPGMETLSSTR
Sbjct: 121 GNKTDLVEKRQVSIEEGDAKSREFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTR 180

Query: 181 HEDMVDVNLKPPVNSSQTEQQGGGCAC 208
            EDMVDVNLKP VNSS TEQQGGGCAC
Sbjct: 181 QEDMVDVNLKPAVNSSHTEQQGGGCAC 207

[Close]

BLAST of Sed0021983 vs. NCBI nr
Match: KAF3441062.1 (hypothetical protein FNV43_RR19348 [Rhamnella rubrinervis])

HSP 1 Score: 388.3 bits (996), Expect = 4.2e-104
Identity = 195/207 (94.20%), Postives = 204/207 (98.55%), Query Frame = 0


Query: 1   MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTIRL 60
           MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRT+RL
Sbjct: 1   MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVSNRISFLNTTKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAV+VYDV+NR SFLNT+KWIEEVRTERG+DVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSKWIEEVRTERGTDVIIVLV 120

Query: 121 GNKTDLVDKRQVSIDEGDAKSRDSGVMFIETSARAGFNIKPLFRKIAAALPGMETLSSTR 180
           GNKTDLVDKRQVSI+EGDAKSR+SGVMFIETSA+AGFNIKPLFRKIAAALPGMETLSST+
Sbjct: 121 GNKTDLVDKRQVSIEEGDAKSRESGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180

Query: 181 HEDMVDVNLKPPVNSSQTEQQGGGCAC 208
            EDMVDVNLKP VNSSQTEQQGGGCAC
Sbjct: 181 QEDMVDVNLKPTVNSSQTEQQGGGCAC 207

[Close]

BLAST of Sed0021983 vs. ExPASy Swiss-Prot
Match: Q9LFT9 (Ras-related protein RABH1e OS=Arabidopsis thaliana OX=3702 GN=RABH1E PE=2 SV=1)

HSP 1 Score: 368.6 bits (945), Expect = 4.6e-101
Identity = 186/207 (89.86%), Postives = 198/207 (95.65%), Query Frame = 0


Query: 1   MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTIRL 60
           MA+VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRT+RL
Sbjct: 1   MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVSNRISFLNTTKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAV+VYDV+NR SFLNT+KWIE+VRTERGSDVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSKWIEDVRTERGSDVIIVLV 120

Query: 121 GNKTDLVDKRQVSIDEGDAKSRDSGVMFIETSARAGFNIKPLFRKIAAALPGMETLSSTR 180
           GNKTDLVDKRQVSI+EGD K+RD GV+FIETSA+AGFNIKPLFRKIAAALPGMETLSST+
Sbjct: 121 GNKTDLVDKRQVSIEEGDNKARDYGVIFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180

Query: 181 HEDMVDVNLKPPVNSSQTEQQGGGCAC 208
            EDMVDVNLK   NS+Q EQQ GGCAC
Sbjct: 181 QEDMVDVNLKTSSNSAQGEQQRGGCAC 207

[Close]

BLAST of Sed0021983 vs. ExPASy Swiss-Prot
Match: Q9SID8 (Ras-related protein RABH1d OS=Arabidopsis thaliana OX=3702 GN=RABH1D PE=3 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 1.1e-99
Identity = 181/207 (87.44%), Postives = 197/207 (95.17%), Query Frame = 0


Query: 1   MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTIRL 60
           MA+VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRT+RL
Sbjct: 1   MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVSNRISFLNTTKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAVVVYDV+NR+SFLNT+KWIEEVR ER  DVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVANRLSFLNTSKWIEEVRNERAGDVIIVLV 120

Query: 121 GNKTDLVDKRQVSIDEGDAKSRDSGVMFIETSARAGFNIKPLFRKIAAALPGMETLSSTR 180
           GNKTDLV+KRQVSI+EGD+K R+ GVMFIETSA+AGFNIKPLFRKIAAALPGME+ S+T+
Sbjct: 121 GNKTDLVEKRQVSIEEGDSKGREYGVMFIETSAKAGFNIKPLFRKIAAALPGMESYSNTK 180

Query: 181 HEDMVDVNLKPPVNSSQTEQQGGGCAC 208
           +EDMVDVNLKP  NSSQ +QQGG C+C
Sbjct: 181 NEDMVDVNLKPTSNSSQGDQQGGACSC 207

[Close]

BLAST of Sed0021983 vs. ExPASy Swiss-Prot
Match: O80501 (Ras-related protein RABH1b OS=Arabidopsis thaliana OX=3702 GN=RABH1B PE=1 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 8.3e-95
Identity = 177/208 (85.10%), Postives = 192/208 (92.31%), Query Frame = 0


Query: 1   MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTIRL 60
           MA VS LAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYLEDRT+RL
Sbjct: 1   MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVSNRISFLNTTKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAV+VYDV++R SFLNTTKWI+EVRTERGSDVI+VLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWIDEVRTERGSDVIVVLV 120

Query: 121 GNKTDLVDKRQVSIDEGDAKSRDSGVMFIETSARAGFNIKPLFRKIAAALPGMETLSSTR 180
           GNKTDLVDKRQVSI+E +AK+R+  VMFIETSA+AGFNIK LFRKIAAALPGMETLSST+
Sbjct: 121 GNKTDLVDKRQVSIEEAEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180

Query: 181 HEDMVDVNLKPP-VNSSQTEQQGGGCAC 208
            EDMVDVNLK    N+S  +QQ GGC+C
Sbjct: 181 QEDMVDVNLKSSNANASLAQQQSGGCSC 208

[Close]

BLAST of Sed0021983 vs. ExPASy Swiss-Prot
Match: Q9SMR4 (Ras-related protein RABH1c OS=Arabidopsis thaliana OX=3702 GN=RABH1C PE=1 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 5.8e-88
Identity = 170/214 (79.44%), Postives = 190/214 (88.79%), Query Frame = 0


Query: 1   MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTIRL 60
           MA+VSPLAK+KLVFLGDQSVGKTSIITRFMYDKFDTTYQ TIGIDFLSKTMYLEDRT+RL
Sbjct: 1   MASVSPLAKFKLVFLGDQSVGKTSIITRFMYDKFDTTYQPTIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVSNRISFLNTTKWIEEVRTERG-SDVIIVL 120
           QLWDTAGQERFRSLIPSYIRDSSVA+VVYDVSNR +FLNT+KWIE+V  ERG S+VIIVL
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAIVVYDVSNRQTFLNTSKWIEDVHRERGQSNVIIVL 120

Query: 121 VGNKTDLVDKRQVSIDEGDAKSRDSGVMFIETSARAGFNIKPLFRKIAAALPGMETLS-S 180
           VGNKTDLV+KRQVSI EG+ K ++ GVMFIETSA+  FNIK LFRKIAAALPG+++ S +
Sbjct: 121 VGNKTDLVEKRQVSISEGEDKGKEYGVMFIETSAKENFNIKALFRKIAAALPGVDSYSLA 180

Query: 181 TRHEDMVDVNLKPPVNSSQTEQQ-----GGGCAC 208
           T+ +DMVDVNLK   NSSQ EQQ     GGGC+C
Sbjct: 181 TKSDDMVDVNLKTTSNSSQGEQQGGAGGGGGCSC 214

[Close]

BLAST of Sed0021983 vs. ExPASy Swiss-Prot
Match: P20340 (Ras-related protein Rab-6A OS=Homo sapiens OX=9606 GN=RAB6A PE=1 SV=3)

HSP 1 Score: 303.5 bits (776), Expect = 1.8e-81
Identity = 148/203 (72.91%), Postives = 175/203 (86.21%), Query Frame = 0


Query: 5   SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTIRLQLWD 64
           +PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRT+RLQLWD
Sbjct: 9   NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68

Query: 65  TAGQERFRSLIPSYIRDSSVAVVVYDVSNRISFLNTTKWIEEVRTERGSDVIIVLVGNKT 124
           TAGQERFRSLIPSYIRDS+VAVVVYD++N  SF  TTKWI++VRTERGSDVII+LVGNKT
Sbjct: 69  TAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 128

Query: 125 DLVDKRQVSIDEGDAKSRDSGVMFIETSARAGFNIKPLFRKIAAALPGMETLSSTRHEDM 184
           DL DKRQVSI+EG+ K+++  VMFIETSA+AG+N+K LFR++AAALPGME+      EDM
Sbjct: 129 DLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDM 188

Query: 185 VDVNLKPPVNSSQTEQQGGGCAC 208
           +D+ L+ P     +E   GGC+C
Sbjct: 189 IDIKLEKPQEQPVSE---GGCSC 208

[Close]

BLAST of Sed0021983 vs. ExPASy TrEMBL
Match: A0A6J1GDU2 (ras-related protein RABH1e OS=Cucurbita moschata OX=3662 GN=LOC111453275 PE=4 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 5.4e-105
Identity = 199/207 (96.14%), Postives = 203/207 (98.07%), Query Frame = 0


Query: 1   MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTIRL 60
           MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTIRL
Sbjct: 1   MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTIRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVSNRISFLNTTKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVSNR SFLNTTKWIEEVRTERGSDVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVSNRQSFLNTTKWIEEVRTERGSDVIIVLV 120

Query: 121 GNKTDLVDKRQVSIDEGDAKSRDSGVMFIETSARAGFNIKPLFRKIAAALPGMETLSSTR 180
           GNKTDLV+KRQVSI+EGDAKSR+ GVMFIETSA+AGFNIKPLFRKIAAALPGMETLSSTR
Sbjct: 121 GNKTDLVEKRQVSIEEGDAKSREFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTR 180

Query: 181 HEDMVDVNLKPPVNSSQTEQQGGGCAC 208
            EDMVDVNLKP VNSSQTEQQGGGCAC
Sbjct: 181 QEDMVDVNLKPAVNSSQTEQQGGGCAC 207

[Close]

BLAST of Sed0021983 vs. ExPASy TrEMBL
Match: A0A6J1KRN2 (ras-related protein RABH1e OS=Cucurbita maxima OX=3661 GN=LOC111497024 PE=4 SV=1)

HSP 1 Score: 389.8 bits (1000), Expect = 7.1e-105
Identity = 199/207 (96.14%), Postives = 202/207 (97.58%), Query Frame = 0


Query: 1   MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTIRL 60
           MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTIRL
Sbjct: 1   MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTIRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVSNRISFLNTTKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVSNR SFLNTTKWIEEVRTERGSDVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVSNRQSFLNTTKWIEEVRTERGSDVIIVLV 120

Query: 121 GNKTDLVDKRQVSIDEGDAKSRDSGVMFIETSARAGFNIKPLFRKIAAALPGMETLSSTR 180
           GNKTDLVDKRQVSI+EGDAKSR+ GVMFIETSA+AGFNIKPLFRKIAAALPGMETLSSTR
Sbjct: 121 GNKTDLVDKRQVSIEEGDAKSREFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTR 180

Query: 181 HEDMVDVNLKPPVNSSQTEQQGGGCAC 208
            EDMVDVNLKP VNSS TEQQGGGCAC
Sbjct: 181 QEDMVDVNLKPAVNSSHTEQQGGGCAC 207

[Close]

BLAST of Sed0021983 vs. ExPASy TrEMBL
Match: A0A0A0KGR9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G500400 PE=4 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 1.6e-104
Identity = 198/207 (95.65%), Postives = 203/207 (98.07%), Query Frame = 0


Query: 1   MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTIRL 60
           MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTIRL
Sbjct: 1   MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTIRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVSNRISFLNTTKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVSNR SFLNTTKWIEEVRTERGSDVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVSNRQSFLNTTKWIEEVRTERGSDVIIVLV 120

Query: 121 GNKTDLVDKRQVSIDEGDAKSRDSGVMFIETSARAGFNIKPLFRKIAAALPGMETLSSTR 180
           GNKTDLV+KRQVSI+EGDAKSR+ GVMFIETSA+AGFNIKPLFRKIAAALPGMETLSSTR
Sbjct: 121 GNKTDLVEKRQVSIEEGDAKSREFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTR 180

Query: 181 HEDMVDVNLKPPVNSSQTEQQGGGCAC 208
            EDMVDVNLKP VNSSQ+EQQGGGCAC
Sbjct: 181 QEDMVDVNLKPAVNSSQSEQQGGGCAC 207

[Close]

BLAST of Sed0021983 vs. ExPASy TrEMBL
Match: A0A1S3B1I2 (ras-related protein RABH1e OS=Cucumis melo OX=3656 GN=LOC103484969 PE=4 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 1.6e-104
Identity = 198/207 (95.65%), Postives = 203/207 (98.07%), Query Frame = 0


Query: 1   MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTIRL 60
           MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTIRL
Sbjct: 1   MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTIRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVSNRISFLNTTKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVSNR SFLNTTKWIEEVRTERGSDVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVSNRQSFLNTTKWIEEVRTERGSDVIIVLV 120

Query: 121 GNKTDLVDKRQVSIDEGDAKSRDSGVMFIETSARAGFNIKPLFRKIAAALPGMETLSSTR 180
           GNKTDLV+KRQVSI+EGDAKSR+ GVMFIETSA+AGFNIKPLFRKIAAALPGMETLSSTR
Sbjct: 121 GNKTDLVEKRQVSIEEGDAKSREFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTR 180

Query: 181 HEDMVDVNLKPPVNSSQTEQQGGGCAC 208
            EDMVDVNLKP VNSSQ+EQQGGGCAC
Sbjct: 181 QEDMVDVNLKPAVNSSQSEQQGGGCAC 207

[Close]

BLAST of Sed0021983 vs. ExPASy TrEMBL
Match: A0A6J1IN20 (ras-related protein RABH1e-like OS=Cucurbita maxima OX=3661 GN=LOC111478505 PE=4 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 2.1e-104
Identity = 198/207 (95.65%), Postives = 202/207 (97.58%), Query Frame = 0


Query: 1   MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTIRL 60
           MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTIRL
Sbjct: 1   MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTIRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVSNRISFLNTTKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVSNR SFLNTTKWIEEVRTERGSDVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVSNRQSFLNTTKWIEEVRTERGSDVIIVLV 120

Query: 121 GNKTDLVDKRQVSIDEGDAKSRDSGVMFIETSARAGFNIKPLFRKIAAALPGMETLSSTR 180
           GNKTDLV+KRQVSI+EGDAKSR+ GVMFIETSA+AGFNIKPLFRKIAAALPGMETLSSTR
Sbjct: 121 GNKTDLVEKRQVSIEEGDAKSREFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTR 180

Query: 181 HEDMVDVNLKPPVNSSQTEQQGGGCAC 208
            EDMVDVNLKP VNSS TEQQGGGCAC
Sbjct: 181 QEDMVDVNLKPAVNSSHTEQQGGGCAC 207

[Close]

BLAST of Sed0021983 vs. TAIR 10
Match: AT5G10260.1 (RAB GTPase homolog H1E )

HSP 1 Score: 368.6 bits (945), Expect = 3.2e-102
Identity = 186/207 (89.86%), Postives = 198/207 (95.65%), Query Frame = 0


Query: 1   MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTIRL 60
           MA+VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRT+RL
Sbjct: 1   MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVSNRISFLNTTKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAV+VYDV+NR SFLNT+KWIE+VRTERGSDVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSKWIEDVRTERGSDVIIVLV 120

Query: 121 GNKTDLVDKRQVSIDEGDAKSRDSGVMFIETSARAGFNIKPLFRKIAAALPGMETLSSTR 180
           GNKTDLVDKRQVSI+EGD K+RD GV+FIETSA+AGFNIKPLFRKIAAALPGMETLSST+
Sbjct: 121 GNKTDLVDKRQVSIEEGDNKARDYGVIFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180

Query: 181 HEDMVDVNLKPPVNSSQTEQQGGGCAC 208
            EDMVDVNLK   NS+Q EQQ GGCAC
Sbjct: 181 QEDMVDVNLKTSSNSAQGEQQRGGCAC 207

[Close]

BLAST of Sed0021983 vs. TAIR 10
Match: AT2G22290.1 (RAB GTPase homolog H1D )

HSP 1 Score: 364.0 bits (933), Expect = 8.0e-101
Identity = 181/207 (87.44%), Postives = 197/207 (95.17%), Query Frame = 0


Query: 1   MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTIRL 60
           MA+VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRT+RL
Sbjct: 1   MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVSNRISFLNTTKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAVVVYDV+NR+SFLNT+KWIEEVR ER  DVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVANRLSFLNTSKWIEEVRNERAGDVIIVLV 120

Query: 121 GNKTDLVDKRQVSIDEGDAKSRDSGVMFIETSARAGFNIKPLFRKIAAALPGMETLSSTR 180
           GNKTDLV+KRQVSI+EGD+K R+ GVMFIETSA+AGFNIKPLFRKIAAALPGME+ S+T+
Sbjct: 121 GNKTDLVEKRQVSIEEGDSKGREYGVMFIETSAKAGFNIKPLFRKIAAALPGMESYSNTK 180

Query: 181 HEDMVDVNLKPPVNSSQTEQQGGGCAC 208
           +EDMVDVNLKP  NSSQ +QQGG C+C
Sbjct: 181 NEDMVDVNLKPTSNSSQGDQQGGACSC 207

[Close]

BLAST of Sed0021983 vs. TAIR 10
Match: AT2G44610.1 (Ras-related small GTP-binding family protein )

HSP 1 Score: 347.8 bits (891), Expect = 5.9e-96
Identity = 177/208 (85.10%), Postives = 192/208 (92.31%), Query Frame = 0


Query: 1   MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTIRL 60
           MA VS LAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYLEDRT+RL
Sbjct: 1   MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVSNRISFLNTTKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAV+VYDV++R SFLNTTKWI+EVRTERGSDVI+VLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWIDEVRTERGSDVIVVLV 120

Query: 121 GNKTDLVDKRQVSIDEGDAKSRDSGVMFIETSARAGFNIKPLFRKIAAALPGMETLSSTR 180
           GNKTDLVDKRQVSI+E +AK+R+  VMFIETSA+AGFNIK LFRKIAAALPGMETLSST+
Sbjct: 121 GNKTDLVDKRQVSIEEAEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180

Query: 181 HEDMVDVNLKPP-VNSSQTEQQGGGCAC 208
            EDMVDVNLK    N+S  +QQ GGC+C
Sbjct: 181 QEDMVDVNLKSSNANASLAQQQSGGCSC 208

[Close]

BLAST of Sed0021983 vs. TAIR 10
Match: AT4G39890.1 (RAB GTPase homolog H1C )

HSP 1 Score: 325.1 bits (832), Expect = 4.1e-89
Identity = 170/214 (79.44%), Postives = 190/214 (88.79%), Query Frame = 0


Query: 1   MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTIRL 60
           MA+VSPLAK+KLVFLGDQSVGKTSIITRFMYDKFDTTYQ TIGIDFLSKTMYLEDRT+RL
Sbjct: 1   MASVSPLAKFKLVFLGDQSVGKTSIITRFMYDKFDTTYQPTIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVSNRISFLNTTKWIEEVRTERG-SDVIIVL 120
           QLWDTAGQERFRSLIPSYIRDSSVA+VVYDVSNR +FLNT+KWIE+V  ERG S+VIIVL
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAIVVYDVSNRQTFLNTSKWIEDVHRERGQSNVIIVL 120

Query: 121 VGNKTDLVDKRQVSIDEGDAKSRDSGVMFIETSARAGFNIKPLFRKIAAALPGMETLS-S 180
           VGNKTDLV+KRQVSI EG+ K ++ GVMFIETSA+  FNIK LFRKIAAALPG+++ S +
Sbjct: 121 VGNKTDLVEKRQVSISEGEDKGKEYGVMFIETSAKENFNIKALFRKIAAALPGVDSYSLA 180

Query: 181 TRHEDMVDVNLKPPVNSSQTEQQ-----GGGCAC 208
           T+ +DMVDVNLK   NSSQ EQQ     GGGC+C
Sbjct: 181 TKSDDMVDVNLKTTSNSSQGEQQGGAGGGGGCSC 214

[Close]

BLAST of Sed0021983 vs. TAIR 10
Match: AT5G64990.1 (RAB GTPase homolog H1A )

HSP 1 Score: 290.4 bits (742), Expect = 1.1e-78
Identity = 148/199 (74.37%), Postives = 171/199 (85.93%), Query Frame = 0


Query: 10  YKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQE 69
           YKLVFLGDQ VGKTSIIT FMY KFDT+YQATIGIDFLSKT   EDRT RLQLWDTAGQE
Sbjct: 8   YKLVFLGDQGVGKTSIITCFMYGKFDTSYQATIGIDFLSKTTRYEDRTFRLQLWDTAGQE 67

Query: 70  RFRSLIPSYIRDSSVAVVVYDVSNRISFLNTTKWIEEVRTERGSDVIIVLVGNKTDLVDK 129
           RF+SL+PSYIRDSSVAV+VYDV+++ SF+NT+KWIEEVR ERGS VIIVLVGNKTDLV+K
Sbjct: 68  RFKSLVPSYIRDSSVAVIVYDVASKQSFINTSKWIEEVRAERGSYVIIVLVGNKTDLVNK 127

Query: 130 RQVSIDEGDAKSRDSGVMFIETSARAGFNIKPLFRKIAAALPGMETLSSTRHEDMVDVNL 189
           RQVSI+EG+ K+R+ G +F+ETSA+AGFNIKPLF KI +AL G E +S T+ ED+VDVNL
Sbjct: 128 RQVSIEEGENKAREFGALFMETSAKAGFNIKPLFCKITSALQGNEAVSWTKQEDLVDVNL 187

Query: 190 KPPVNSSQ-TEQQGGGCAC 208
           KP + SSQ   QQ   C+C
Sbjct: 188 KPLMFSSQANHQQESNCSC 206

The following BLAST results are available for this feature:

BLAST of Sed0021983 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022950086.1	1.1e-104	96.14	ras-related protein RABH1e [Cucurbita moschata] >XP_022950088.1 ras-related prot...	[more]
XP_023003400.1	1.5e-104	96.14	ras-related protein RABH1e [Cucurbita maxima]	[more]
XP_004143465.1	3.2e-104	95.65	ras-related protein RABH1e [Cucumis sativus] >XP_008440593.1 PREDICTED: ras-rela...	[more]
XP_022962792.1	4.2e-104	95.65	ras-related protein RABH1e-like [Cucurbita moschata] >XP_022978564.1 ras-related...	[more]
KAF3441062.1	4.2e-104	94.20	hypothetical protein FNV43_RR19348 [Rhamnella rubrinervis]	[more]

BLAST of Sed0021983 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LFT9	4.6e-101	89.86	Ras-related protein RABH1e OS=Arabidopsis thaliana OX=3702 GN=RABH1E PE=2 SV=1	[more]
Q9SID8	1.1e-99	87.44	Ras-related protein RABH1d OS=Arabidopsis thaliana OX=3702 GN=RABH1D PE=3 SV=1	[more]
O80501	8.3e-95	85.10	Ras-related protein RABH1b OS=Arabidopsis thaliana OX=3702 GN=RABH1B PE=1 SV=1	[more]
Q9SMR4	5.8e-88	79.44	Ras-related protein RABH1c OS=Arabidopsis thaliana OX=3702 GN=RABH1C PE=1 SV=1	[more]
P20340	1.8e-81	72.91	Ras-related protein Rab-6A OS=Homo sapiens OX=9606 GN=RAB6A PE=1 SV=3	[more]

BLAST of Sed0021983 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GDU2	5.4e-105	96.14	ras-related protein RABH1e OS=Cucurbita moschata OX=3662 GN=LOC111453275 PE=4 SV...	[more]
A0A6J1KRN2	7.1e-105	96.14	ras-related protein RABH1e OS=Cucurbita maxima OX=3661 GN=LOC111497024 PE=4 SV=1	[more]
A0A0A0KGR9	1.6e-104	95.65	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G500400 PE=4 SV=1	[more]
A0A1S3B1I2	1.6e-104	95.65	ras-related protein RABH1e OS=Cucumis melo OX=3656 GN=LOC103484969 PE=4 SV=1	[more]
A0A6J1IN20	2.1e-104	95.65	ras-related protein RABH1e-like OS=Cucurbita maxima OX=3661 GN=LOC111478505 PE=4...	[more]

BLAST of Sed0021983 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G10260.1	3.2e-102	89.86	RAB GTPase homolog H1E	[more]
AT2G22290.1	8.0e-101	87.44	RAB GTPase homolog H1D	[more]
AT2G44610.1	5.9e-96	85.10	Ras-related small GTP-binding family protein	[more]
AT4G39890.1	4.1e-89	79.44	RAB GTPase homolog H1C	[more]
AT5G64990.1	1.1e-78	74.37	RAB GTPase homolog H1A	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 148..170 score: 32.69 coord: 51..73 score: 48.02 coord: 113..126 score: 53.75 coord: 33..49 score: 34.11 coord: 10..31 score: 41.61
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 7..173 e-value: 2.2E-28 score: 110.3
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 10..173 e-value: 1.2E-80 score: 283.9
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 15..201 e-value: 1.8E-5 score: 28.4
None	No IPR available	PANTHER	PTHR24073:SF1130	RAS-RELATED PROTEIN RABH1D	coord: 1..207
None	No IPR available	PANTHER	PTHR24073	DRAB5-RELATED	coord: 1..207
None	No IPR available	PROSITE	PS51420	RHO	coord: 3..176 score: 10.106506
None	No IPR available	PROSITE	PS51419	RAB	coord: 1..207 score: 30.086695
None	No IPR available	CDD	cd01861	Rab6	coord: 10..170 e-value: 3.40053E-112 score: 315.331
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 12..172 e-value: 2.6E-13 score: 50.4
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 11..169 e-value: 4.3E-55 score: 185.7
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 5..207 score: 15.428831
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 7..202 e-value: 3.1E-63 score: 214.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 9..182
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 9..166 e-value: 7.9E-29 score: 98.5

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0021983.1	Sed0021983.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0006891	intra-Golgi vesicle-mediated transport
biological_process	GO:0042147	retrograde transport, endosome to Golgi
biological_process	GO:0006890	retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005794	Golgi apparatus
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding