Sed0021956 (gene) Chayote v1

Overview


Name	Sed0021956
Type	gene
Organism	Sechium edule (Chayote v1)
Description	protein BOLA4, chloroplastic/mitochondrial
Location	LG05: 4011745 .. 4017855 (+)
RNA-Seq Expression	Sed0021956
Synteny	Sed0021956

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAACAAAAGAGAAGAGGAGCTTGTGCCGACCATACACAAATCGATAAACAAACCAAACAAATTAAGCAGAGCAATTCGATCGATTCTGCCGCCGCCAAGACGTCGACGATGATGATCAAGCTTCCGCAAGTCTCCTTCCGGCGGGTTCTTCCGCTGTTCGTCCACCGCAACGACCAGTTTTTGGTTGCTTCCCGTCATTTCACGGCCAACTGTGGCCGCTCCGCCGCCGTCGCCGCCGCAATCACTACCACAACCCCCACCGGCGTCCGTAGTAAGAGCGGTACTGTTTCGAAATTTAGCTATGGTGACGGAAGAGTCTCGAATTGGGGCTCGAGTCGGAACTTGAGTATTCGAGCCACTCAAGTGAATGACTCCGGATCTATCGATTCCCCGCTTATGCAATCCATGGAGAACAAGGTAGTGTTTCGTTTAGTTTTTTTTTGGGTTTTATTATCGTTCTAGATTGATATTTGTCTTCGTTTTCATTTCTTTGTAGAAAAGGGTAAATTATAAATCGAAGAAAGTTAGAGTTTAGTCCTATGTTTCAAATACTATAATTTAGTCTTTATGATGGGAAGATAGATAGAATTTAATCAATTTAAAAAGAGTAGTTGTCGTTCCTAATTGTTAACGAATGAGTACGTGAAAGTTAGTTATTTATGTTGCCATGATTAAAATTTGAGTTAAGTGATTGCTTGGAAAAAAAAATCACATCACTTAAGTATGAATAGCTAACTTTCACTCATTTAGTTTGCCAGCTACTACGAAGGACAAGAACTAGTTTTTAGGTTATATCAAATCATATGGACTATAATTTAGTTTTAAAAACTATTGTGCTAAATTCTTACTTTCTTCAAACCATAGGGACTAGATTCTATTTTTTGTAACCACAAGTACTAAGCTTAACTTTTTTCAAACAATAGGACGAAATTTATAATTTTCCTTTAGACAACTATTCTCGAAAAAATGTAAGGTTTTAAGATATGTTTTGAATGACTGAATGCCCTATGATTAGTTAGTCGGGGGTTTCGCTGCTCGGTCAGGGAGTGGGGGTTTGGGGGCAACGCCCCCGAAACCTCTACGAAATCTATATTTGTTATTTAATGGGCTTTTATGTATTTTGAGTCTATTTTCTGTAATAGGGTTTTATGAGAGTGTCTATATAAACTCAAATTAAACCGTAGCTACCCTAGTCCCTATGATGTTCATTATGTATTTTTGCTCTCCTTAATAAAATCGTGCCCCCTCCCTGCCCGCGGACTAGCTAACACAACGTTAGTGAACCACGTAAATTTTGTGTGTTTTTTTCTTCTCTTCTACGTTTTCTTATTCTTTATTCGCTTGTTGATTGCTGATTTCATAACATAGTGCAAGTTACTGATCTAATTTAAGAGGAATGGAACCTCATAGTTGATTTTTGTTTAGAAATGTTCTTAGTAGGATAGGACATAGATAAATAACTTAACACTTTATGTGATGATTCCATTAATCTCTTGTTTATGTTCTACCAACTTGTTTAGCTATAAGCCGAGTCATGTAAGAAGGCAGGCCAACTAATTATTTCAACTAATTATTTCCAAGGTCATCTGTGCTAAAACTGGCATATGAAATTGATGGAATCAGCGCCTATCATGCAAATAAAACAAGTACGAGTCTAAGACGACAAGTTTTCTTATAAGCATTAAGAGAGATATAGGAATTATGAGTAGTTGTTTGGACAAGGAGTTACATTTATGTACCATTAGTCTTGCATTGGCCTCGGCGCAATCAATTTTGAACAATCTACCACTTCATTACTTCACCTTCCTTAGAGCTCCCATGAAAGTGATATAGACCTTGACAAAAATTATGGGGGATATCACTTGAAAGTTGGAACAAGAGTGTCTATAATCGTTTTTGTCATTTGGTGAACTGGAACGTGTCTTCCCTTCCCACTATGTATGCGATTTGGATCGGGCTCCATCAGATAGAAGAACAATGCTCTTCTCGGAAAGAAAGGCCATGGAGACTCACTCAAGAATATGCGACTTTGTGGGGGAAGAGACATCGCTAGTGTTTTTGAACTAGAACTTCTTGGCTAGGATACTAAGTCGTCCAAAGGAAAATAGGGTGCAGGTTGTAGTGTGGAGGCATAGCCTTCTTCTTTTGGTTTTTGAAGTTTATAGTTTCAAATGGGAAGATGGCCTGTTTTTGGGAGGACAAGTGGTCTGACTCGGTTCTTTTCGTTGAGTTATTCTTTGATATTTACAGGACCTCTCCCCAAAAAAGGTTTCTTCATGAAAATGTTGGATTTAGGAGTGAAGGGGCTGTTTCAGCCAATACCTTAGAAGTTGGTTGACCCTCCTTGAGGAACTCAATATGGGCCATCTTGGGCTTATTGAAAACAAAGCTTGTTGGTCTCCTCAATTGATGTTACTTTCTTTTTCAAATGAGCTTTTTTTTTACAAGAAACAACCATTTTTATTGATAGGTGGAAAGTGGCTCTTGCTCAAAGATACAAGCTCCACGAAAGAAAGCATCTAAAAGCATGAAATAAAACAACAGCAAGCCAAACTTGAAAATGAAACCAGAAGCTTACTTCTTTTGTAAAGCTTACCTTTTTTTTTTGTTCTTTGTGAATTGATGTGTACTTCCTCTTTCTAAAGCCTAATTGTATAACTTCAAAGTTGTAGTCCATGTCTTGTTTGCAATTTCAAGATTCATTTCCTAAACAGGCATAGATTTCTATGTGCAGTCTGCACTCATGAGAAGTTTCGAAGGAAGTTCTATAATTGGTCTCTATCCCCTTCCTTACTTTGGTCGTTAAGAGGGTTAAAAAGAAAGAGGGTTAAATCCATGGATTGTCTCTTTCTTTATTGGACCATTACGTTGAGAAGTTTGTTATGAATGAAGACGGGTTATTTGTTTGCCTTCCCGTAAGTTTAGATTATTGGTGGGGATTGAGCAGGTATTTTTTTTAAAGGCAAGGTCAGATATTACAGATTTGTGCGGCTAAAATCTCCCCTTTGCATCTTATGGAAGGAAAGAAATCAAAAGTTTTTCAAATTTGTAGGGTTGTAAAGTGTGCAATCTTAGTCGTGATTATTTTTTGAAATTATTGCCAACAAAAGCATAGCTCTAGTGACATGATATATGACCTAGTAACCAGGAGGTTATGAGTTTAAATCCCCACCCTTAAATGTTGTTGATTTTGTTTAAAAAAATATATAAAATGTTGTTGATTTTTTTTAATCTTGAAATTATTCTGGTAAAAACTTATTCGAAGAGAAATTGTTATTTTTCCTATTCTTTTTACATTTTCTTCTATTTCAAGAAGATTGAAATTTTATTTATTGAGTTTGACATTGCAAATTTTTTCATCAGATAAAGGAACAACTCGATGCACAATCTGTCTCGGTAAAAGATGCTTATGGAGATGGACGACACGTTAGGTGAGGAATTTTTCTCTATAATGCTTTTCTTTGGTAGCATATGTAAGAAACTTGATTTATCCAGAAAGCCTTGCTGGGAAATTATTTTATATACGGACAAAAAAATTTGAAAAATTCTTTTCTTCTATTTGTTCCTGATTGACGTTTGGGCTTCTTATAAAATTTGTCTGCCTTCAGTTCAAATCATGGTGTTTAAGACTCCAATCGTCCAGAGCTCATTAGCAGTTTTTTCCTTTTGGAGTTTTTTAGTAACCAAAAAACAAACAATTTAGGCCCCGTTTGATAACCATTTTGTTTTTCGTTTTTTGAAATTTAAGCCTACAACAACTACCTTACCATAACTTTTTCCTTATTTGAACATCTACATTTTACCTATATTTTAATAGACAAAACCAAAATTTTGAAAAAACAAAGTAGCTTCCAAAAGGTTGTTTTTGTTTTTGAAATTTGGTTAGTATTCACCTACCTTCTTAAGGAAAGATGGATATATTGTAGGAAAGATGGAGCACGTAGTAGAAAACTTGAGTAGAAATAGGTTTGTTGGTTGATATAATTAAATTTACCCCAATCCATAAGCTTAGGCTTTTGGATTGATTGGTGGTTTAACATAATTCAACATGGTATCAGAGCAGGAGGTCATGAGTTCGAATCCCTGCCAAGTCATTTCATCCCCAATTAAAATTAAAAGTCCACTTGTAGGGCATTTCTCAAATTTCAAAGCCCACAAGTGAGGGGGAGTGTTGGTTGATATAATTAAATTTACCCCAATCCATAAGCTTAGGCTTTTGGATTGATTGGTAGTTTGACATAATTCAACAAGGTTTAAATTTCATAAACAACAAAAAACCAAATGGTTATCAAATGGGGCCTCAATCTGAAGTTTTTGTTTGGGAACTTGGTCACTCCTGTATTAACACTTACGACAAGCTTCAATGGACCCTCCTTGAATCACCATTTCTCCTATAGCTGCTGCCATCTATGCATTAAAAATAACGAAAAACACGAACCTCTTTCAGATGGCGCATATGCAACATTCTTCTTGAACTATTTTCAGTAAGCTTTTTGTTGATACACTACTTGTCCTGGTGATATCTCAACTACTGCATCAATGGTCAGCCTTTCAAGAAGGAAAAGAAGATTTTTGACTTGGAACTTATGGTTGCAAGAGCGATGCCCGCATCTTTTCAGATAAACAACAAAGCGTAGATAGTTCTAGGATGTTGCATATTATTAAAGAGATTACACCCCCGCATCCAAGGAGAATTTCGTTGAAGCTTGTGAAAAGTGTTAATACAAGAATGACTAAGCTCGCAAACATATTACTTTGTCGCCAAATTCAGTGAAGCTCAACTAATTAAGGTTATTTTGGGTGGTGTGGTGGTCGAAGATTTGGGGTTTGAAGGGGTGCTCTTTTTGAGGTCCTAGGTTCAAGTCTCACTTATGACCAATGTTTTAAAAAGCCCAAGGCGCACTAAGGCACAATGGGCCTCTGGGCCTCAGGCGCAAGGCGCACCATAAGGCGCAAACTTTTTTACATCATGCGCACTATATAAAAAAACAATTTATTTATTTATTTTTATATATATATGTGTGTACAACCAATAAAAACAATAAAAATATTTCCATAGACATAAATGAAGTTTTGACCAAGAATAATATACAAAACATATATTACATTTAACTATTAACCTTTATTTCATGGAAAAAAATGAAGTTTAACTAAGAATATATACAAAAAATACATAAGATTCAACTATTAACCTTTCGTTTAAACAAATGTTGTCCTTGTGAGTTGAAGAATTAAGTTATTTAAGGTATTTAAATGTCTTGAATAAGTTATCTTGCGGTTTGAATGACCTAGTACGGGGATCTCACAAAGGATAAAGGTGAAAACATGAAAAAATACAAAGAAAATGAAAAAGCCCACTAGGCGTACGCCTTTTGGCGCCCGAGGCTTCACGTAAGGAGACAAAAGGCCCGCGCCTTATTAAGTGCGCCTCGCCTGCACCTTGGGCCTAGGCGCGCGCCTGACGGGACGTTTTAAAACACTGCTTATGACATGAATTTGTAGACACTTTTTGTGTCTCCATTCCTTCTATGTCTCCTGGTGCACTTAGGGATGAGCGTGGTTACCCCATGTAAAGTGGAGCGAAACTCTGCTCAACCAAGAGGTTTGAGGTTCGGACGTCCACACGTTGAACTCATTCGAGGCAATATTGGTTGGGGAAATTCATGTAGGATGCATGTGGTAAAGTTGAATTGATTGGTAATTAAGTTCATTTGATTGCAGCATCGATGTTGTTTCTTCAGCATTTGAGGGACAAACAGCTGTTAATAGGCAGAGGATGGTATACAAAGCTATTTGGGAGGAGCTGCAGAGCACGGTGCATGCAGTGGATCAGATGACCACCAGAACACCCACTGAAGCAGCACCTCACAACTCATAACCATGGAAGTTTTTCTTAGCCTTACCCCAAACATCTCTAAAATTCATGTCACAACTTGAATTATATTGCTTTTTTACGGTATTTGAATTATGTTGTTTTTTAAAAAAAAATAAAAAATTCAACAACATTTGAAATTTGAACACGTAACGAATTGGTTATTATCTGATACATAATGTGAGTGGAGTACTGCTCCTTTTGGCATATTGTTACTGTTAGACTTAGTTGAGTTG

mRNA sequence

AAAAAACAAAAGAGAAGAGGAGCTTGTGCCGACCATACACAAATCGATAAACAAACCAAACAAATTAAGCAGAGCAATTCGATCGATTCTGCCGCCGCCAAGACGTCGACGATGATGATCAAGCTTCCGCAAGTCTCCTTCCGGCGGGTTCTTCCGCTGTTCGTCCACCGCAACGACCAGTTTTTGGTTGCTTCCCGTCATTTCACGGCCAACTGTGGCCGCTCCGCCGCCGTCGCCGCCGCAATCACTACCACAACCCCCACCGGCGTCCGTAGTAAGAGCGGTACTGTTTCGAAATTTAGCTATGGTGACGGAAGAGTCTCGAATTGGGGCTCGAGTCGGAACTTGAGTATTCGAGCCACTCAAGTGAATGACTCCGGATCTATCGATTCCCCGCTTATGCAATCCATGGAGAACAAGATAAAGGAACAACTCGATGCACAATCTGTCTCGGTAAAAGATGCTTATGGAGATGGACGACACGTTAGCATCGATGTTGTTTCTTCAGCATTTGAGGGACAAACAGCTGTTAATAGGCAGAGGATGGTATACAAAGCTATTTGGGAGGAGCTGCAGAGCACGGTGCATGCAGTGGATCAGATGACCACCAGAACACCCACTGAAGCAGCACCTCACAACTCATAACCATGGAAGTTTTTCTTAGCCTTACCCCAAACATCTCTAAAATTCATGTCACAACTTGAATTATATTGCTTTTTTACGGTATTTGAATTATGTTGTTTTTTAAAAAAAAATAAAAAATTCAACAACATTTGAAATTTGAACACGTAACGAATTGGTTATTATCTGATACATAATGTGAGTGGAGTACTGCTCCTTTTGGCATATTGTTACTGTTAGACTTAGTTGAGTTG

Coding sequence (CDS)

ATGATGATCAAGCTTCCGCAAGTCTCCTTCCGGCGGGTTCTTCCGCTGTTCGTCCACCGCAACGACCAGTTTTTGGTTGCTTCCCGTCATTTCACGGCCAACTGTGGCCGCTCCGCCGCCGTCGCCGCCGCAATCACTACCACAACCCCCACCGGCGTCCGTAGTAAGAGCGGTACTGTTTCGAAATTTAGCTATGGTGACGGAAGAGTCTCGAATTGGGGCTCGAGTCGGAACTTGAGTATTCGAGCCACTCAAGTGAATGACTCCGGATCTATCGATTCCCCGCTTATGCAATCCATGGAGAACAAGATAAAGGAACAACTCGATGCACAATCTGTCTCGGTAAAAGATGCTTATGGAGATGGACGACACGTTAGCATCGATGTTGTTTCTTCAGCATTTGAGGGACAAACAGCTGTTAATAGGCAGAGGATGGTATACAAAGCTATTTGGGAGGAGCTGCAGAGCACGGTGCATGCAGTGGATCAGATGACCACCAGAACACCCACTGAAGCAGCACCTCACAACTCATAA

Protein sequence

MMIKLPQVSFRRVLPLFVHRNDQFLVASRHFTANCGRSAAVAAAITTTTPTGVRSKSGTVSKFSYGDGRVSNWGSSRNLSIRATQVNDSGSIDSPLMQSMENKIKEQLDAQSVSVKDAYGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPTEAAPHNS

Homology

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BLAST of Sed0021956 vs. NCBI nr
Match: XP_022996142.1 (protein BOLA4, chloroplastic/mitochondrial [Cucurbita maxima])

HSP 1 Score: 285.0 bits (728), Expect = 4.3e-73
Identity = 149/176 (84.66%), Postives = 160/176 (90.91%), Query Frame = 0


Query: 2   MIKLPQVSFRRVLPLFVHRNDQFLVASRHFTANCGRSAAVAAAITTTTPTGVRSKSGTVS 61
           MIK+PQV+FRRVLPLFVHRN+QF + S+ FT NC R+AAV+AAITTTT TGV SKS  V 
Sbjct: 6   MIKVPQVAFRRVLPLFVHRNEQFFIVSQQFTTNCVRTAAVSAAITTTTATGVCSKSSNVL 65

Query: 62  KFSYGDGRVSNWGSSRNLSIRATQVNDSGSIDSPLMQSMENKIKEQLDAQSVSVKDAYGD 121
           KFSY +GR SNWGSSRN+ +RATQVNDSGSIDSPLMQSMENKIKEQL+AQSVSVKDAYGD
Sbjct: 66  KFSYVNGRFSNWGSSRNMCVRATQVNDSGSIDSPLMQSMENKIKEQLEAQSVSVKDAYGD 125

Query: 122 GRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPTEAAPHNS 178
           GRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPTEA   NS
Sbjct: 126 GRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPTEAEAQNS 181

[Close]

BLAST of Sed0021956 vs. NCBI nr
Match: KAG6605693.1 (Protein BOLA4, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 281.6 bits (719), Expect = 4.8e-72
Identity = 148/176 (84.09%), Postives = 159/176 (90.34%), Query Frame = 0


Query: 2   MIKLPQVSFRRVLPLFVHRNDQFLVASRHFTANCGRSAAVAAAITTTTPTGVRSKSGTVS 61
           MIK+PQV+FRRVLPLFVHRN+QF + S+ FT NC R+AAV+AAITTTT T VRSKS  V 
Sbjct: 1   MIKVPQVAFRRVLPLFVHRNEQFSIVSQQFTTNCVRTAAVSAAITTTTATCVRSKSSNVL 60

Query: 62  KFSYGDGRVSNWGSSRNLSIRATQVNDSGSIDSPLMQSMENKIKEQLDAQSVSVKDAYGD 121
           KFSY +GR SNWGSSRN+ +RATQVNDSGSIDSPLMQSMENKIKEQL+AQSVSVKDAYGD
Sbjct: 61  KFSYVNGRSSNWGSSRNMCVRATQVNDSGSIDSPLMQSMENKIKEQLEAQSVSVKDAYGD 120

Query: 122 GRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPTEAAPHNS 178
           GRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTP EA   NS
Sbjct: 121 GRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAEAQNS 176

[Close]

BLAST of Sed0021956 vs. NCBI nr
Match: XP_023534696.1 (protein BOLA4, chloroplastic/mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 280.8 bits (717), Expect = 8.2e-72
Identity = 148/176 (84.09%), Postives = 157/176 (89.20%), Query Frame = 0


Query: 2   MIKLPQVSFRRVLPLFVHRNDQFLVASRHFTANCGRSAAVAAAITTTTPTGVRSKSGTVS 61
           MIK PQV+FRRVLPL VHRN+QF V S+ FT NC R+AAV+AAITTTT TGV SKS  V 
Sbjct: 1   MIKAPQVAFRRVLPLIVHRNEQFFVVSQQFTTNCVRTAAVSAAITTTTATGVGSKSSNVL 60

Query: 62  KFSYGDGRVSNWGSSRNLSIRATQVNDSGSIDSPLMQSMENKIKEQLDAQSVSVKDAYGD 121
           KFSY +GR SNWGSSRN+ +RATQVNDSGSIDSPLMQSMENKIKEQL+AQSVSVKDAYGD
Sbjct: 61  KFSYVNGRFSNWGSSRNMCVRATQVNDSGSIDSPLMQSMENKIKEQLEAQSVSVKDAYGD 120

Query: 122 GRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPTEAAPHNS 178
           GRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTP EA   NS
Sbjct: 121 GRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAEAQNS 176

[Close]

BLAST of Sed0021956 vs. NCBI nr
Match: KAG7035601.1 (Protein BOLA4, chloroplastic/mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 280.0 bits (715), Expect = 1.4e-71
Identity = 147/177 (83.05%), Postives = 159/177 (89.83%), Query Frame = 0


Query: 1   MMIKLPQVSFRRVLPLFVHRNDQFLVASRHFTANCGRSAAVAAAITTTTPTGVRSKSGTV 60
           MMIK+PQV+FRRVLPLFVHRN+QF + S+ FT +C R+AAV+AAITTTT TGV SKS  V
Sbjct: 1   MMIKVPQVAFRRVLPLFVHRNEQFFIVSQQFTTSCVRTAAVSAAITTTTATGVCSKSSNV 60

Query: 61  SKFSYGDGRVSNWGSSRNLSIRATQVNDSGSIDSPLMQSMENKIKEQLDAQSVSVKDAYG 120
            KFSY + R SNWGSSRN+ +RATQVNDSGSIDSPLMQSMENKIKEQL+AQSVSVKDAYG
Sbjct: 61  LKFSYVNRRFSNWGSSRNMCVRATQVNDSGSIDSPLMQSMENKIKEQLEAQSVSVKDAYG 120

Query: 121 DGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPTEAAPHNS 178
           DGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTP EA   NS
Sbjct: 121 DGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAEAQNS 177

[Close]

BLAST of Sed0021956 vs. NCBI nr
Match: XP_022958680.1 (protein BOLA4, chloroplastic/mitochondrial [Cucurbita moschata])

HSP 1 Score: 279.3 bits (713), Expect = 2.4e-71
Identity = 146/171 (85.38%), Postives = 157/171 (91.81%), Query Frame = 0


Query: 2   MIKLPQVSFRRVLPLFVHRNDQFLVASRHFTANCGRSAAVAAAITTTTPTGVRSKSGTVS 61
           MIK+PQV+FRRVLPLFVHRN+QF + S+ FT NC R+AAV+AAITTTT T VRSKS  V 
Sbjct: 1   MIKVPQVAFRRVLPLFVHRNEQFSIVSQQFTTNCVRTAAVSAAITTTTATCVRSKSSNVL 60

Query: 62  KFSYGDGRVSNWGSSRNLSIRATQVNDSGSIDSPLMQSMENKIKEQLDAQSVSVKDAYGD 121
           KFSY +GR SNWGSSRN+ +RATQVNDSGSIDSPLMQSMENKIKEQL+AQSVSVKDAYGD
Sbjct: 61  KFSYVNGRSSNWGSSRNMCVRATQVNDSGSIDSPLMQSMENKIKEQLEAQSVSVKDAYGD 120

Query: 122 GRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPTEA 173
           GRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTP EA
Sbjct: 121 GRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEA 171

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BLAST of Sed0021956 vs. ExPASy Swiss-Prot
Match: Q9LF68 (Protein BOLA4, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=BOLA4 PE=1 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 5.9e-33
Identity = 83/140 (59.29%), Postives = 103/140 (73.57%), Query Frame = 0


Query: 38  SAAVAAAITTTTPTGVRSKSGTVSKFSYGD--GRVSNWGS----SRNLSIRATQVNDSGS 97
           SA +     +   + V S+  T     YG+   RVS +G+    S N S +++Q+ND+GS
Sbjct: 37  SAPLVRFTNSRCVSAVLSRKETAPSSIYGNRVSRVSGFGALDIRSLNFSTKSSQINDAGS 96

Query: 98  IDSPLMQSMENKIKEQLDAQSVSVKDAYGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIW 157
           ID  LMQSME KIKEQL+A+SV+V D  GDGRHV I+VVSSAFEGQ+AVNRQRMVYKAIW
Sbjct: 97  IDQTLMQSMELKIKEQLNAESVTVTDMSGDGRHVCINVVSSAFEGQSAVNRQRMVYKAIW 156

Query: 158 EELQSTVHAVDQMTTRTPTE 172
           EELQ+ VHAVDQMTT+TP+E
Sbjct: 157 EELQNVVHAVDQMTTKTPSE 176

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BLAST of Sed0021956 vs. ExPASy Swiss-Prot
Match: Q682I1 (Protein BOLA1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BOLA1 PE=1 SV=1)

HSP 1 Score: 45.1 bits (105), Expect = 9.9e-04
Identity = 34/129 (26.36%), Postives = 70/129 (54.26%), Query Frame = 0


Query: 59  TVSKFSYGDGRVSNWGSSRNLSIRATQV--NDSGSIDSPLMQSMENKIKEQLDAQSVSVK 118
           +V KF   + + +  G SR++++ + +   +DSG+I++   + M  K++++L+   + ++
Sbjct: 31  SVPKFFNSESKSTGTG-SRSVAMSSVEKTGSDSGAIENRASR-MREKLQKELEPVELVIE 90

Query: 119 DA-------------YGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQ 173
           D                D  H ++ +VS  FEG   V R R+VY  + EEL + +HA+  
Sbjct: 91  DVSYQHAGHAGMKGRTDDETHFNVKIVSKGFEGMNLVKRHRLVYHLLREELDTGLHAL-S 150

[Close]

BLAST of Sed0021956 vs. ExPASy TrEMBL
Match: A0A6J1K139 (protein BOLA4, chloroplastic/mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111491454 PE=3 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 2.1e-73
Identity = 149/176 (84.66%), Postives = 160/176 (90.91%), Query Frame = 0


Query: 2   MIKLPQVSFRRVLPLFVHRNDQFLVASRHFTANCGRSAAVAAAITTTTPTGVRSKSGTVS 61
           MIK+PQV+FRRVLPLFVHRN+QF + S+ FT NC R+AAV+AAITTTT TGV SKS  V 
Sbjct: 6   MIKVPQVAFRRVLPLFVHRNEQFFIVSQQFTTNCVRTAAVSAAITTTTATGVCSKSSNVL 65

Query: 62  KFSYGDGRVSNWGSSRNLSIRATQVNDSGSIDSPLMQSMENKIKEQLDAQSVSVKDAYGD 121
           KFSY +GR SNWGSSRN+ +RATQVNDSGSIDSPLMQSMENKIKEQL+AQSVSVKDAYGD
Sbjct: 66  KFSYVNGRFSNWGSSRNMCVRATQVNDSGSIDSPLMQSMENKIKEQLEAQSVSVKDAYGD 125

Query: 122 GRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPTEAAPHNS 178
           GRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPTEA   NS
Sbjct: 126 GRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPTEAEAQNS 181

[Close]

BLAST of Sed0021956 vs. ExPASy TrEMBL
Match: A0A6J1H464 (protein BOLA4, chloroplastic/mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111459834 PE=3 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 1.1e-71
Identity = 146/171 (85.38%), Postives = 157/171 (91.81%), Query Frame = 0


Query: 2   MIKLPQVSFRRVLPLFVHRNDQFLVASRHFTANCGRSAAVAAAITTTTPTGVRSKSGTVS 61
           MIK+PQV+FRRVLPLFVHRN+QF + S+ FT NC R+AAV+AAITTTT T VRSKS  V 
Sbjct: 1   MIKVPQVAFRRVLPLFVHRNEQFSIVSQQFTTNCVRTAAVSAAITTTTATCVRSKSSNVL 60

Query: 62  KFSYGDGRVSNWGSSRNLSIRATQVNDSGSIDSPLMQSMENKIKEQLDAQSVSVKDAYGD 121
           KFSY +GR SNWGSSRN+ +RATQVNDSGSIDSPLMQSMENKIKEQL+AQSVSVKDAYGD
Sbjct: 61  KFSYVNGRSSNWGSSRNMCVRATQVNDSGSIDSPLMQSMENKIKEQLEAQSVSVKDAYGD 120

Query: 122 GRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPTEA 173
           GRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTP EA
Sbjct: 121 GRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEA 171

[Close]

BLAST of Sed0021956 vs. ExPASy TrEMBL
Match: A0A0A0KRR5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G172860 PE=3 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 7.2e-66
Identity = 139/177 (78.53%), Postives = 152/177 (85.88%), Query Frame = 0


Query: 1   MMIKLPQVSFRRVLPLFVHRNDQFLVASRHFTANCGRSAAVAAAITTTTPTGVRSKSGTV 60
           MMIK+PQV+FRRVLP+F+ RN  F V SR  T+NC  + AV A I +T+ TG+RSKS  V
Sbjct: 1   MMIKVPQVAFRRVLPIFLPRNRPFSVVSRQVTSNCVCTPAVVAVIISTSTTGLRSKSSNV 60

Query: 61  SKFSYGDGRVSNWGSSRNLSIRATQVNDSGSIDSPLMQSMENKIKEQLDAQSVSVKDAYG 120
           +K+S  +G    WGSSRNLSIRATQVN+SGSIDSPLMQSMENKIKEQLDAQSVSVKDAYG
Sbjct: 61  AKYSRANGTFPKWGSSRNLSIRATQVNESGSIDSPLMQSMENKIKEQLDAQSVSVKDAYG 120

Query: 121 DGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPTEAAPHNS 178
           DGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTP EAA  NS
Sbjct: 121 DGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAAAQNS 177

[Close]

BLAST of Sed0021956 vs. ExPASy TrEMBL
Match: A0A6J1DZG6 (protein BOLA4, chloroplastic/mitochondrial OS=Momordica charantia OX=3673 GN=LOC111026033 PE=3 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 3.6e-65
Identity = 138/176 (78.41%), Postives = 152/176 (86.36%), Query Frame = 0


Query: 2   MIKLPQVSFRRVLPLFVHRNDQFLVASRHFTANCGRSAAVAAAITTTTPTGVRSKSGTVS 61
           M+++PQV+FRRVLPLFVHR+  FLV SR  T NC R+A  AAAI++ T T VR KS  V+
Sbjct: 3   MVRVPQVAFRRVLPLFVHRDVPFLVVSRQITTNCVRTA--AAAISSRTTTSVRCKSSNVA 62

Query: 62  KFSYGDGRVSNWGSSRNLSIRATQVNDSGSIDSPLMQSMENKIKEQLDAQSVSVKDAYGD 121
           K+   +G  S WGSSRNLSIRATQVNDSGSIDSPLMQSMENKIKEQLDAQSV+VKDAYGD
Sbjct: 63  KYGSANGTFSKWGSSRNLSIRATQVNDSGSIDSPLMQSMENKIKEQLDAQSVTVKDAYGD 122

Query: 122 GRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPTEAAPHNS 178
           GRHVSIDV+SSAFEGQ+AVNRQRMVYKAIWEELQSTVHAVDQMTTRTP EAA  NS
Sbjct: 123 GRHVSIDVISSAFEGQSAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAAVKNS 176

[Close]

BLAST of Sed0021956 vs. ExPASy TrEMBL
Match: A0A1S3CT29 (protein BOLA4, chloroplastic/mitochondrial OS=Cucumis melo OX=3656 GN=LOC103504639 PE=3 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 1.0e-64
Identity = 137/176 (77.84%), Postives = 150/176 (85.23%), Query Frame = 0


Query: 2   MIKLPQVSFRRVLPLFVHRNDQFLVASRHFTANCGRSAAVAAAITTTTPTGVRSKSGTVS 61
           MIK+PQ++FRRVLP+ + RN  F V SR  T+NC  +AAV A IT+ + TG+RSKS  V 
Sbjct: 3   MIKVPQLAFRRVLPMLLPRNQPFSVVSRQITSNCVCTAAVVAVITSKSNTGLRSKSSNVV 62

Query: 62  KFSYGDGRVSNWGSSRNLSIRATQVNDSGSIDSPLMQSMENKIKEQLDAQSVSVKDAYGD 121
           K+S  +G    WGSSRNLSIRATQVN+SGSIDSPLMQSMENKIKEQLDAQSVSVKDAYGD
Sbjct: 63  KYSRANGTFPKWGSSRNLSIRATQVNESGSIDSPLMQSMENKIKEQLDAQSVSVKDAYGD 122

Query: 122 GRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPTEAAPHNS 178
           GRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTP EAA  NS
Sbjct: 123 GRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAAAQNS 178

[Close]

BLAST of Sed0021956 vs. TAIR 10
Match: AT5G17560.1 (BolA-like family protein )

HSP 1 Score: 142.1 bits (357), Expect = 4.2e-34
Identity = 83/140 (59.29%), Postives = 103/140 (73.57%), Query Frame = 0


Query: 38  SAAVAAAITTTTPTGVRSKSGTVSKFSYGD--GRVSNWGS----SRNLSIRATQVNDSGS 97
           SA +     +   + V S+  T     YG+   RVS +G+    S N S +++Q+ND+GS
Sbjct: 37  SAPLVRFTNSRCVSAVLSRKETAPSSIYGNRVSRVSGFGALDIRSLNFSTKSSQINDAGS 96

Query: 98  IDSPLMQSMENKIKEQLDAQSVSVKDAYGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIW 157
           ID  LMQSME KIKEQL+A+SV+V D  GDGRHV I+VVSSAFEGQ+AVNRQRMVYKAIW
Sbjct: 97  IDQTLMQSMELKIKEQLNAESVTVTDMSGDGRHVCINVVSSAFEGQSAVNRQRMVYKAIW 156

Query: 158 EELQSTVHAVDQMTTRTPTE 172
           EELQ+ VHAVDQMTT+TP+E
Sbjct: 157 EELQNVVHAVDQMTTKTPSE 176

[Close]

BLAST of Sed0021956 vs. TAIR 10
Match: AT1G55805.1 (BolA-like family protein )

HSP 1 Score: 45.1 bits (105), Expect = 7.0e-05
Identity = 34/129 (26.36%), Postives = 70/129 (54.26%), Query Frame = 0


Query: 59  TVSKFSYGDGRVSNWGSSRNLSIRATQV--NDSGSIDSPLMQSMENKIKEQLDAQSVSVK 118
           +V KF   + + +  G SR++++ + +   +DSG+I++   + M  K++++L+   + ++
Sbjct: 31  SVPKFFNSESKSTGTG-SRSVAMSSVEKTGSDSGAIENRASR-MREKLQKELEPVELVIE 90

Query: 119 DA-------------YGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQ 173
           D                D  H ++ +VS  FEG   V R R+VY  + EEL + +HA+  
Sbjct: 91  DVSYQHAGHAGMKGRTDDETHFNVKIVSKGFEGMNLVKRHRLVYHLLREELDTGLHAL-S 150

[Close]

BLAST of Sed0021956 vs. TAIR 10
Match: AT4G26500.1 (chloroplast sulfur E )

HSP 1 Score: 41.6 bits (96), Expect = 7.8e-04
Identity = 26/87 (29.89%), Postives = 48/87 (55.17%), Query Frame = 0


Query: 100 MENKIKEQLDAQSVSVKD--------------AYGDGR-HVSIDVVSSAFEGQTAVNRQR 159
           +  K++++LD   + V+D              A  DG  H ++ +VS AF+G++ V R R
Sbjct: 285 IREKLEKELDPVELEVEDVSYQHAGHAAVRGSAGDDGETHFNLRIVSDAFQGKSLVKRHR 344

Query: 160 MVYKAIWEELQSTVHAVDQMTTRTPTE 172
           ++Y  + +EL+S +HA+  +  +TP E
Sbjct: 345 LIYDLLQDELKSGLHAL-SIVAKTPAE 370

The following BLAST results are available for this feature:

BLAST of Sed0021956 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022996142.1	4.3e-73	84.66	protein BOLA4, chloroplastic/mitochondrial [Cucurbita maxima]	[more]
KAG6605693.1	4.8e-72	84.09	Protein BOLA4, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subs...	[more]
XP_023534696.1	8.2e-72	84.09	protein BOLA4, chloroplastic/mitochondrial [Cucurbita pepo subsp. pepo]	[more]
KAG7035601.1	1.4e-71	83.05	Protein BOLA4, chloroplastic/mitochondrial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022958680.1	2.4e-71	85.38	protein BOLA4, chloroplastic/mitochondrial [Cucurbita moschata]	[more]

BLAST of Sed0021956 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LF68	5.9e-33	59.29	Protein BOLA4, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=BO...	[more]
Q682I1	9.9e-04	26.36	Protein BOLA1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BOLA1 PE=1 SV=1	[more]

BLAST of Sed0021956 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K139	2.1e-73	84.66	protein BOLA4, chloroplastic/mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1H464	1.1e-71	85.38	protein BOLA4, chloroplastic/mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A0A0KRR5	7.2e-66	78.53	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G172860 PE=3 SV=1	[more]
A0A6J1DZG6	3.6e-65	78.41	protein BOLA4, chloroplastic/mitochondrial OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A1S3CT29	1.0e-64	77.84	protein BOLA4, chloroplastic/mitochondrial OS=Cucumis melo OX=3656 GN=LOC1035046...	[more]

BLAST of Sed0021956 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G17560.1	4.2e-34	59.29	BolA-like family protein	[more]
AT1G55805.1	7.0e-05	26.36	BolA-like family protein	[more]
AT4G26500.1	7.8e-04	29.89	chloroplast sulfur E	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002634	BolA protein	PFAM	PF01722	BolA	coord: 119..171 e-value: 3.9E-13 score: 49.5
None	No IPR available	GENE3D	3.10.20.90		coord: 71..176 e-value: 1.2E-22 score: 82.2
None	No IPR available	PANTHER	PTHR46230:SF4	PROTEIN BOLA4, CHLOROPLASTIC/MITOCHONDRIAL	coord: 37..174
None	No IPR available	PANTHER	PTHR46230	FAMILY NOT NAMED	coord: 37..174
IPR036065	BolA-like superfamily	SUPERFAMILY	82657	BolA-like	coord: 85..173

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0021956.1	Sed0021956.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005739	mitochondrion