Sed0021875 (gene) Chayote v1

Overview


Name	Sed0021875
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Pentatricopeptide repeat-containing protein
Location	LG13: 23772182 .. 23775006 (-)
RNA-Seq Expression	Sed0021875
Synteny	Sed0021875

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATTTTTATGGGTAGAGATTGAAAACATGTTTCTCTCCTCATCAATTTTTTTTTGGAGAAATTATCTCATCATTTCAAATCTTTGTTTTTCCACTAATTTTCATTTCATTATCCTTAAAAAAAAAAATCCCCAAAAACCCCCCAAAACCCCTATCGGAGATGAGCTCTCCCTCAACTCTTCATCTCCCAATCCCAGAGGAAACCCTAAACTCATCGACGCTTCTGAAACATTTTTCAGATTTCGATTTCGATTTCGTCCGCCATTGCCACTGATACACAAAGATTCAACTCACAAACGAGCAATTCTTTCAATACAAATGGCTTCCAAGACAGCAGCCTCTGCAATTTCCTCCTCTTTTTCGCCCACTCCTTCAACACTCAAGCTCTCCTCTCTATTTTCTCAATCGCCTAAAATTTCATCTCTAAATCCCAAAAATCCATCGCCAAATCCCACCAAATCGACTGCATCACCGGAAGAGTCAACTACAGGGGATTCGTTGCTTCAGACATTTCTTCAGAATTGCAAGGCAGGTAATATTTCAGCATCTGAAGCATTACATTTCTTTGATCAAATGTTGAGTTTAAAACCTGCCCCTGACATGTCTTCATTCAATCTCGTACTTGGTGGACTTGCTAAGACTAAGCATTATTCTGAGGTTTTTCTGCTGTATAATAGAATGAAATTAGCTGGGTTCTTTCCTAATTACATCATGCTTAATATCTTGCTTAATTGCCTTTGTCATACGAATCGGGTTAGCGAAGGTCTTGCGGCCATGGCGGGGATATTAAGGAGAGGTTATGTTCCGAATATTGTGACGTATACGTCCTTGATTAAGGGGTTGTGTATGGAGGGAAAGATTAGTCAAGCCACTCATATATTTATGAGAATGCAAAAGTTGGGTTGTAGGCCAAATGTGGTCACTTATGGGACTTTAATCAAGGGGCTTTGCCAAACGGGTAATACTAATATTGCGCTTAAGTTGCACGGAGAATTGATCGATGGATCTGGACGATATGGCATTAGTTGTAAGCCTAATGTTATTTGTTATAGTATTATTATAGATAGTCTATGTAAAGAAGGACGAGAAGACAGGGCAGGGGAACTTTTTGAGGAAATGAAAGCTCGGGGATTGGTTCCTGATGTGATTGCTTATAGCTCTTTGATTCATGGATTTGGCTTTGGTGGAAAGTTGGATGAGGCTAAACGTCTATTCAATGAGATGATGGATCAAGGTATTCGACCAAATGTGGTCACATTTAATGTGTTTTTGGGTATTCTTTGCAAGGCAGGAAAGGTTATCGAAGCTAACGAGTTGTTTGAAATCATGATTAAGAGAGGTATTGTTCCCGATTTGTTTACTTATAATACATTGATTGATGGATTCTGTTTGGTTGGTGACCTAAATGGTGCGAAGGAACTGTTTGTTAGTATGGCAAGTAATGGGTGTGAACCTGATGTGATTAGCTACAATGTACTAATCAATGGATATTGCAAAAATTGGAAGGTGGAAGAGGCAATGAACATTTACAATGAAATGCTTCAAGTGGGAATCAAGCCATCTGTGATCACATATAATTCCTTATTAACAGGCCTTTTTCAGGCAGGCAAGGTTGCTGATGCTAGAAAAATATTTGGTGTTATTCAAGATCATGGCCAGTTACCAAGTTCATGTACATTTAATATTTTCTTGGATGGGCTATGTAAGAATGGTTGTTTGTTAGAAGCAATGGAAATTTATAATGAACTCCCATATAATATGAAATCGAACATCGATATCTTTAATTCTATTATCGATGGTCTATGTAAGGCTGGTAAACTTGAAACTGCTTGGGAAATTTTCGAAAAATTGTCCCAAGAAGGGCTTCTTTCAAATGTTGTGACTTATAACATTATGATCCATGGGTGTTTTAAAGAAAGACAAAAAGAAAAGGCAAATGATTTGTTTGAGAAGATGGAAGCAAATGGTTGTACTCCCAATCTAGTCACTTATAATATACTTCTACGTGGTTTCTATGAAAGTGATAAACCAGAGGAAGTGGTTAAACTTTTGCATAGGATGGCTAAGAAAAATGTGTTGCCAGATGCTTCGACTTGCACCTTAGTATTAGAAATGCTTTCTAAAGATGAAAAGTATCGGAGTTATGTGGACTTGCTACCAAAATTTCCTGTCGAAGAGTGTCGTGGTTGATTACAATTCAAATTTTGATAGACTAAGAAGAAACTGTGGCTTGTAATTTCTGGACATGATCAGAAAATTGAAGCTTTGCTGGTTGATCTTGTTGAGCAATTTTTGAGTTCTCTGATGAACTTGCTTGCTTTGACTTCTACATTATTGTAACCCTGGTGAGTTATTCTTGGTTGTTTGCAAAGTTCATTATTCTTCTAGTCTTTCAATCATTAGATACTAAAGCCCACCTTCAGGTTTTTTATATCACAAATTTGAGTCTCTTGTTTATTTGGCTTTTGTTAGATAAAGGGTTTTGAAGGCCTTATGATAGAGCCAGCTACATATGGGGGGGTTCAAGATGTCAAATGTCGCCTAAGTTTAGACTTCTAAACTTGTATATGGAGATGGTGGAGGAATAAAGGGTATTTTTCAAAGTAGAAAGGAAGAGTACACACAGAATAAAAATGTTGTTATGGTAACAAAAATCTTGACCAGATGGGATCTAACTTCAATTGTTTGAATCTCTTACAAAATGATGGCTGCCTTCAATGTTTGTAACTAAGTTCTTACTATTGATATTTGAAACATTTGTACTGTAAAACTTGTAACATTTTTTCAGAAATCCAAGTCCTTTAACTTGAGAAGTTTCAAGCCAA

mRNA sequence

AAATTTTTATGGGTAGAGATTGAAAACATGTTTCTCTCCTCATCAATTTTTTTTTGGAGAAATTATCTCATCATTTCAAATCTTTGTTTTTCCACTAATTTTCATTTCATTATCCTTAAAAAAAAAAATCCCCAAAAACCCCCCAAAACCCCTATCGGAGATGAGCTCTCCCTCAACTCTTCATCTCCCAATCCCAGAGGAAACCCTAAACTCATCGACGCTTCTGAAACATTTTTCAGATTTCGATTTCGATTTCGTCCGCCATTGCCACTGATACACAAAGATTCAACTCACAAACGAGCAATTCTTTCAATACAAATGGCTTCCAAGACAGCAGCCTCTGCAATTTCCTCCTCTTTTTCGCCCACTCCTTCAACACTCAAGCTCTCCTCTCTATTTTCTCAATCGCCTAAAATTTCATCTCTAAATCCCAAAAATCCATCGCCAAATCCCACCAAATCGACTGCATCACCGGAAGAGTCAACTACAGGGGATTCGTTGCTTCAGACATTTCTTCAGAATTGCAAGGCAGGTAATATTTCAGCATCTGAAGCATTACATTTCTTTGATCAAATGTTGAGTTTAAAACCTGCCCCTGACATGTCTTCATTCAATCTCGTACTTGGTGGACTTGCTAAGACTAAGCATTATTCTGAGGTTTTTCTGCTGTATAATAGAATGAAATTAGCTGGGTTCTTTCCTAATTACATCATGCTTAATATCTTGCTTAATTGCCTTTGTCATACGAATCGGGTTAGCGAAGGTCTTGCGGCCATGGCGGGGATATTAAGGAGAGGTTATGTTCCGAATATTGTGACGTATACGTCCTTGATTAAGGGGTTGTGTATGGAGGGAAAGATTAGTCAAGCCACTCATATATTTATGAGAATGCAAAAGTTGGGTTGTAGGCCAAATGTGGTCACTTATGGGACTTTAATCAAGGGGCTTTGCCAAACGGGTAATACTAATATTGCGCTTAAGTTGCACGGAGAATTGATCGATGGATCTGGACGATATGGCATTAGTTGTAAGCCTAATGTTATTTGTTATAGTATTATTATAGATAGTCTATGTAAAGAAGGACGAGAAGACAGGGCAGGGGAACTTTTTGAGGAAATGAAAGCTCGGGGATTGGTTCCTGATGTGATTGCTTATAGCTCTTTGATTCATGGATTTGGCTTTGGTGGAAAGTTGGATGAGGCTAAACGTCTATTCAATGAGATGATGGATCAAGGTATTCGACCAAATGTGGTCACATTTAATGTGTTTTTGGGTATTCTTTGCAAGGCAGGAAAGGTTATCGAAGCTAACGAGTTGTTTGAAATCATGATTAAGAGAGGTATTGTTCCCGATTTGTTTACTTATAATACATTGATTGATGGATTCTGTTTGGTTGGTGACCTAAATGGTGCGAAGGAACTGTTTGTTAGTATGGCAAGTAATGGGTGTGAACCTGATGTGATTAGCTACAATGTACTAATCAATGGATATTGCAAAAATTGGAAGGTGGAAGAGGCAATGAACATTTACAATGAAATGCTTCAAGTGGGAATCAAGCCATCTGTGATCACATATAATTCCTTATTAACAGGCCTTTTTCAGGCAGGCAAGGTTGCTGATGCTAGAAAAATATTTGGTGTTATTCAAGATCATGGCCAGTTACCAAGTTCATGTACATTTAATATTTTCTTGGATGGGCTATGTAAGAATGGTTGTTTGTTAGAAGCAATGGAAATTTATAATGAACTCCCATATAATATGAAATCGAACATCGATATCTTTAATTCTATTATCGATGGTCTATGTAAGGCTGGTAAACTTGAAACTGCTTGGGAAATTTTCGAAAAATTGTCCCAAGAAGGGCTTCTTTCAAATGTTGTGACTTATAACATTATGATCCATGGGTGTTTTAAAGAAAGACAAAAAGAAAAGGCAAATGATTTGTTTGAGAAGATGGAAGCAAATGGTTGTACTCCCAATCTAGTCACTTATAATATACTTCTACGTGGTTTCTATGAAAGTGATAAACCAGAGGAAGTGGTTAAACTTTTGCATAGGATGGCTAAGAAAAATGTGTTGCCAGATGCTTCGACTTGCACCTTAGTATTAGAAATGCTTTCTAAAGATGAAAAGTATCGGAGTTATGTGGACTTGCTACCAAAATTTCCTGTCGAAGAGTGTCGTGGTTGATTACAATTCAAATTTTGATAGACTAAGAAGAAACTGTGGCTTGTAATTTCTGGACATGATCAGAAAATTGAAGCTTTGCTGGTTGATCTTGTTGAGCAATTTTTGAGTTCTCTGATGAACTTGCTTGCTTTGACTTCTACATTATTGTAACCCTGATAAAGGGTTTTGAAGGCCTTATGATAGAGCCAGCTACATATGGGGGGGTTCAAGATGTCAAATGTCGCCTAAGTTTAGACTTCTAAACTTGTATATGGAGATGGTGGAGGAATAAAGGGTATTTTTCAAAGTAGAAAGGAAGAGTACACACAGAATAAAAATGTTGTTATGGTAACAAAAATCTTGACCAGATGGGATCTAACTTCAATTGTTTGAATCTCTTACAAAATGATGGCTGCCTTCAATGTTTGTAACTAAGTTCTTACTATTGATATTTGAAACATTTGTACTGTAAAACTTGTAACATTTTTTCAGAAATCCAAGTCCTTTAACTTGAGAAGTTTCAAGCCAA

Coding sequence (CDS)

ATGTTTCTCTCCTCATCAATTTTTTTTTGGAGAAATTATCTCATCATTTCAAATCTTTGTTTTTCCACTAATTTTCATTTCATTATCCTTAAAAAAAAAAATCCCCAAAAACCCCCCAAAACCCCTATCGGAGATGAGCTCTCCCTCAACTCTTCATCTCCCAATCCCAGAGGAAACCCTAAACTCATCGACGCTTCTGAAACATTTTTCAGATTTCGATTTCGATTTCGTCCGCCATTGCCACTGATACACAAAGATTCAACTCACAAACGAGCAATTCTTTCAATACAAATGGCTTCCAAGACAGCAGCCTCTGCAATTTCCTCCTCTTTTTCGCCCACTCCTTCAACACTCAAGCTCTCCTCTCTATTTTCTCAATCGCCTAAAATTTCATCTCTAAATCCCAAAAATCCATCGCCAAATCCCACCAAATCGACTGCATCACCGGAAGAGTCAACTACAGGGGATTCGTTGCTTCAGACATTTCTTCAGAATTGCAAGGCAGGTAATATTTCAGCATCTGAAGCATTACATTTCTTTGATCAAATGTTGAGTTTAAAACCTGCCCCTGACATGTCTTCATTCAATCTCGTACTTGGTGGACTTGCTAAGACTAAGCATTATTCTGAGGTTTTTCTGCTGTATAATAGAATGAAATTAGCTGGGTTCTTTCCTAATTACATCATGCTTAATATCTTGCTTAATTGCCTTTGTCATACGAATCGGGTTAGCGAAGGTCTTGCGGCCATGGCGGGGATATTAAGGAGAGGTTATGTTCCGAATATTGTGACGTATACGTCCTTGATTAAGGGGTTGTGTATGGAGGGAAAGATTAGTCAAGCCACTCATATATTTATGAGAATGCAAAAGTTGGGTTGTAGGCCAAATGTGGTCACTTATGGGACTTTAATCAAGGGGCTTTGCCAAACGGGTAATACTAATATTGCGCTTAAGTTGCACGGAGAATTGATCGATGGATCTGGACGATATGGCATTAGTTGTAAGCCTAATGTTATTTGTTATAGTATTATTATAGATAGTCTATGTAAAGAAGGACGAGAAGACAGGGCAGGGGAACTTTTTGAGGAAATGAAAGCTCGGGGATTGGTTCCTGATGTGATTGCTTATAGCTCTTTGATTCATGGATTTGGCTTTGGTGGAAAGTTGGATGAGGCTAAACGTCTATTCAATGAGATGATGGATCAAGGTATTCGACCAAATGTGGTCACATTTAATGTGTTTTTGGGTATTCTTTGCAAGGCAGGAAAGGTTATCGAAGCTAACGAGTTGTTTGAAATCATGATTAAGAGAGGTATTGTTCCCGATTTGTTTACTTATAATACATTGATTGATGGATTCTGTTTGGTTGGTGACCTAAATGGTGCGAAGGAACTGTTTGTTAGTATGGCAAGTAATGGGTGTGAACCTGATGTGATTAGCTACAATGTACTAATCAATGGATATTGCAAAAATTGGAAGGTGGAAGAGGCAATGAACATTTACAATGAAATGCTTCAAGTGGGAATCAAGCCATCTGTGATCACATATAATTCCTTATTAACAGGCCTTTTTCAGGCAGGCAAGGTTGCTGATGCTAGAAAAATATTTGGTGTTATTCAAGATCATGGCCAGTTACCAAGTTCATGTACATTTAATATTTTCTTGGATGGGCTATGTAAGAATGGTTGTTTGTTAGAAGCAATGGAAATTTATAATGAACTCCCATATAATATGAAATCGAACATCGATATCTTTAATTCTATTATCGATGGTCTATGTAAGGCTGGTAAACTTGAAACTGCTTGGGAAATTTTCGAAAAATTGTCCCAAGAAGGGCTTCTTTCAAATGTTGTGACTTATAACATTATGATCCATGGGTGTTTTAAAGAAAGACAAAAAGAAAAGGCAAATGATTTGTTTGAGAAGATGGAAGCAAATGGTTGTACTCCCAATCTAGTCACTTATAATATACTTCTACGTGGTTTCTATGAAAGTGATAAACCAGAGGAAGTGGTTAAACTTTTGCATAGGATGGCTAAGAAAAATGTGTTGCCAGATGCTTCGACTTGCACCTTAGTATTAGAAATGCTTTCTAAAGATGAAAAGTATCGGAGTTATGTGGACTTGCTACCAAAATTTCCTGTCGAAGAGTGTCGTGGTTGA

Protein sequence

MFLSSSIFFWRNYLIISNLCFSTNFHFIILKKKNPQKPPKTPIGDELSLNSSSPNPRGNPKLIDASETFFRFRFRFRPPLPLIHKDSTHKRAILSIQMASKTAASAISSSFSPTPSTLKLSSLFSQSPKISSLNPKNPSPNPTKSTASPEESTTGDSLLQTFLQNCKAGNISASEALHFFDQMLSLKPAPDMSSFNLVLGGLAKTKHYSEVFLLYNRMKLAGFFPNYIMLNILLNCLCHTNRVSEGLAAMAGILRRGYVPNIVTYTSLIKGLCMEGKISQATHIFMRMQKLGCRPNVVTYGTLIKGLCQTGNTNIALKLHGELIDGSGRYGISCKPNVICYSIIIDSLCKEGREDRAGELFEEMKARGLVPDVIAYSSLIHGFGFGGKLDEAKRLFNEMMDQGIRPNVVTFNVFLGILCKAGKVIEANELFEIMIKRGIVPDLFTYNTLIDGFCLVGDLNGAKELFVSMASNGCEPDVISYNVLINGYCKNWKVEEAMNIYNEMLQVGIKPSVITYNSLLTGLFQAGKVADARKIFGVIQDHGQLPSSCTFNIFLDGLCKNGCLLEAMEIYNELPYNMKSNIDIFNSIIDGLCKAGKLETAWEIFEKLSQEGLLSNVVTYNIMIHGCFKERQKEKANDLFEKMEANGCTPNLVTYNILLRGFYESDKPEEVVKLLHRMAKKNVLPDASTCTLVLEMLSKDEKYRSYVDLLPKFPVEECRG

Homology

[Close]

BLAST of Sed0021875 vs. NCBI nr
Match: KAG7014482.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 957.6 bits (2474), Expect = 6.1e-275
Identity = 477/640 (74.53%), Postives = 540/640 (84.38%), Query Frame = 0


Query: 98  MASKTAASAISSSFSPTPSTLKLSSLFSQSPKISSLNPKNPSP----------NPTKSTA 157
           M SKT ASAISSS SP PS  KLSSLF++ P I+S NP+NPSP           P  S  
Sbjct: 1   MVSKTVASAISSSLSPAPSKGKLSSLFTRPPIIASSNPQNPSPIPAESPPIISKPPNSNV 60

Query: 158 SP----EESTTG---DSLLQTFLQNCKAGNISASEALHFFDQMLSLKPAPDMSSFNLVLG 217
           SP    E+STT       L+TFLQNCK GN + SEA  FFD M+   P P MSSFNL+LG
Sbjct: 61  SPEVSLEKSTTEIPFHERLRTFLQNCKTGNFTVSEAFQFFDLMMLANPTPAMSSFNLLLG 120

Query: 218 GLAKTKHYSEVFLLYNRMKLAGFFPNYIMLNILLNCLCHTNRVSEGLAAMAGILRRGYVP 277
           GLAKTKHYSEV  LY RM LAG  PNYI LNILLNCLC+ NR+SEGLAAMAGI+RRG++P
Sbjct: 121 GLAKTKHYSEVLKLYYRMSLAGLLPNYITLNILLNCLCNVNRISEGLAAMAGIIRRGFIP 180

Query: 278 NIVTYTSLIKGLCMEGKISQATHIFMRMQKLGCRPNVVTYGTLIKGLCQTGNTNIALKLH 337
           NIVTYTSLIKGLCME +IS+AT +FMRMQKLGCRPNV+TYGTLIKGLCQTGNTNIALKLH
Sbjct: 181 NIVTYTSLIKGLCMEHRISEATRLFMRMQKLGCRPNVITYGTLIKGLCQTGNTNIALKLH 240

Query: 338 GELIDGSGRYGISCKPNVICYSIIIDSLCKEGREDRAGELFEEMKARGLVPDVIAYSSLI 397
            E+++G+GRYGISCKPNVI YS IID LCK+GRED+A ELFEEMKAR ++PDVI+YSSLI
Sbjct: 241 EEMLNGTGRYGISCKPNVISYSTIIDGLCKDGREDKARELFEEMKARRMLPDVISYSSLI 300

Query: 398 HGFGFGGKLDEAKRLFNEMMDQGIRPNVVTFNVFLGILCKAGKVIEANELFEIMIKRGIV 457
           HGF  GGK +EAK LFNEM+D GI+PN VTFNV + ILCKAGKVIEANEL E+MI+RG V
Sbjct: 301 HGFCNGGKWEEAKCLFNEMVDLGIQPNAVTFNVLMDILCKAGKVIEANELLEVMIQRGNV 360

Query: 458 PDLFTYNTLIDGFCLVGDLNGAKELFVSMASNGCEPDVISYNVLINGYCKNWKVEEAMNI 517
           PDLFTYNTL+DGFCLV DL+ A+ELF+SM S GCEP+VISYNVLINGYCKNWKVEEAM I
Sbjct: 361 PDLFTYNTLMDGFCLVSDLDSARELFLSMPSKGCEPNVISYNVLINGYCKNWKVEEAMKI 420

Query: 518 YNEMLQVGIKPSVITYNSLLTGLFQAGKVADARKIFGVIQDHGQLPSSCTFNIFLDGLCK 577
           YNEMLQVGIKPSVITYN+LLTGLFQAGKV DA+KIFGVIQ HG +PSS T +IF+DGLCK
Sbjct: 421 YNEMLQVGIKPSVITYNALLTGLFQAGKVNDAKKIFGVIQAHGLVPSSSTLSIFVDGLCK 480

Query: 578 NGCLLEAMEIYNELPYNMKSNIDIFNSIIDGLCKAGKLETAWEIFEKLSQEGLLSNVVTY 637
           N CLLEAMEI+NEL YN+K +IDIFN +IDGLCKAGKLETAWE F+K+S+EGLL NVVTY
Sbjct: 481 NDCLLEAMEIFNELSYNLKLDIDIFNCLIDGLCKAGKLETAWEFFDKISREGLLPNVVTY 540

Query: 638 NIMIHGCFKERQKEKANDLFEKMEANGCTPNLVTYNILLRGFYESDKPEEVVKLLHRMAK 697
           +I+IHGC KE Q EKANDLF KME NGCTPN++TYN LLRGFY+S+K EEVV+LLHRM K
Sbjct: 541 SILIHGCCKEGQVEKANDLFRKMEENGCTPNVITYNTLLRGFYKSNKREEVVELLHRMVK 600

Query: 698 KNVLPDASTCTLVLEMLSKDEKYRSYVDLLPKFPVEECRG 721
           KNV+PDASTCT+VL+MLSKDEKYR  ++LLP FPV+E RG
Sbjct: 601 KNVVPDASTCTIVLDMLSKDEKYRGCLNLLPMFPVQEYRG 640

[Close]

BLAST of Sed0021875 vs. NCBI nr
Match: XP_022953742.1 (putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial [Cucurbita moschata])

HSP 1 Score: 957.6 bits (2474), Expect = 6.1e-275
Identity = 477/640 (74.53%), Postives = 541/640 (84.53%), Query Frame = 0


Query: 98  MASKTAASAISSSFSPTPSTLKLSSLFSQSPKISSLNPKNPSP----------NPTKSTA 157
           M  KT ASAISSS SP PS  KLSSLF++ P I+S NP+NPSP           P  S  
Sbjct: 1   MVPKTVASAISSSLSPAPSKGKLSSLFTRPPIIASSNPQNPSPIPAESPPIISKPPNSNV 60

Query: 158 SP----EESTTGDSL---LQTFLQNCKAGNISASEALHFFDQMLSLKPAPDMSSFNLVLG 217
           SP    E+STT  S    L+TFLQNCK GN + SEAL FFD M+   P P MSSFNL+LG
Sbjct: 61  SPEVSLEKSTTEISFHGRLRTFLQNCKTGNFTVSEALQFFDLMMLANPTPAMSSFNLLLG 120

Query: 218 GLAKTKHYSEVFLLYNRMKLAGFFPNYIMLNILLNCLCHTNRVSEGLAAMAGILRRGYVP 277
           GLAKTKHYSEV  LY RM LAG  PNYI LNILLNCLC+ NR+SEGLAAMAGI+RRG++P
Sbjct: 121 GLAKTKHYSEVLKLYYRMSLAGLLPNYITLNILLNCLCNVNRISEGLAAMAGIIRRGFIP 180

Query: 278 NIVTYTSLIKGLCMEGKISQATHIFMRMQKLGCRPNVVTYGTLIKGLCQTGNTNIALKLH 337
           NIVTYTSLIKGLCME +IS+AT +FMRMQKLGCRPNV+TYGTLIKGLCQTGNTNIALKLH
Sbjct: 181 NIVTYTSLIKGLCMEHRISEATRLFMRMQKLGCRPNVITYGTLIKGLCQTGNTNIALKLH 240

Query: 338 GELIDGSGRYGISCKPNVICYSIIIDSLCKEGREDRAGELFEEMKARGLVPDVIAYSSLI 397
            E+++G+GRYGISCKPNVI YS IID LCK+GRED+A ELFEEMKAR ++PDVI+YSSLI
Sbjct: 241 EEMLNGTGRYGISCKPNVISYSTIIDGLCKDGREDKARELFEEMKARRMLPDVISYSSLI 300

Query: 398 HGFGFGGKLDEAKRLFNEMMDQGIRPNVVTFNVFLGILCKAGKVIEANELFEIMIKRGIV 457
           HGF  GGK +EAK LFNEM+D GI+PN VTFNV + ILCKAGKVIEANEL E+MI+RG V
Sbjct: 301 HGFCNGGKWEEAKCLFNEMVDLGIQPNAVTFNVLMDILCKAGKVIEANELLEVMIQRGNV 360

Query: 458 PDLFTYNTLIDGFCLVGDLNGAKELFVSMASNGCEPDVISYNVLINGYCKNWKVEEAMNI 517
           PDLFTYNTL+DGFCLV DL+ A+ELF+SM S GCEP+VISYNVLINGYCKNWKVEEAM I
Sbjct: 361 PDLFTYNTLMDGFCLVSDLDSARELFLSMPSKGCEPNVISYNVLINGYCKNWKVEEAMKI 420

Query: 518 YNEMLQVGIKPSVITYNSLLTGLFQAGKVADARKIFGVIQDHGQLPSSCTFNIFLDGLCK 577
           YNEMLQVGIKPS+ITYN+LLTGLFQAGKV DA+KIFGVIQ HG +PSS T +IF+DGLCK
Sbjct: 421 YNEMLQVGIKPSMITYNALLTGLFQAGKVNDAKKIFGVIQAHGLVPSSSTLSIFVDGLCK 480

Query: 578 NGCLLEAMEIYNELPYNMKSNIDIFNSIIDGLCKAGKLETAWEIFEKLSQEGLLSNVVTY 637
           N CLLEAMEI+NEL YN+K +IDIFN +IDGLCKAGKLETAWE F+K+S+EGLL NVVTY
Sbjct: 481 NDCLLEAMEIFNELSYNLKLDIDIFNCLIDGLCKAGKLETAWEFFDKISREGLLPNVVTY 540

Query: 638 NIMIHGCFKERQKEKANDLFEKMEANGCTPNLVTYNILLRGFYESDKPEEVVKLLHRMAK 697
           +I+IHGC KE Q EKANDLF KME NGCTPN++TYN LLRGFY+S+K EEVV+LLHRM K
Sbjct: 541 SILIHGCCKEGQVEKANDLFRKMEENGCTPNVITYNTLLRGFYKSNKREEVVELLHRMVK 600

Query: 698 KNVLPDASTCTLVLEMLSKDEKYRSYVDLLPKFPVEECRG 721
           KNV+PDASTCT+VL+MLSKDEKYR  ++LLP FPV+E RG
Sbjct: 601 KNVVPDASTCTIVLDMLSKDEKYRGCLNLLPTFPVQEYRG 640

[Close]

BLAST of Sed0021875 vs. NCBI nr
Match: KAG6575949.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 954.9 bits (2467), Expect = 4.0e-274
Identity = 476/639 (74.49%), Postives = 539/639 (84.35%), Query Frame = 0


Query: 98  MASKTAASAISSSFSPTPSTLKLSSLFSQSPKISSLNPKNPSP----------NPTKSTA 157
           M SKT ASAISSS SP PS  KLSSLF++ P I+S NP+NPSP           P  S  
Sbjct: 1   MVSKTVASAISSSLSPAPSKGKLSSLFTRPPIIASSNPQNPSPIPAESPPIISKPPNSNV 60

Query: 158 SP----EESTTG---DSLLQTFLQNCKAGNISASEALHFFDQMLSLKPAPDMSSFNLVLG 217
           SP    E+STT       L+TFLQNCK GN + SEA  FFD M+   P P MSSFNL+LG
Sbjct: 61  SPEVSLEKSTTEIPFHERLRTFLQNCKTGNFTVSEAFQFFDLMMLANPTPAMSSFNLLLG 120

Query: 218 GLAKTKHYSEVFLLYNRMKLAGFFPNYIMLNILLNCLCHTNRVSEGLAAMAGILRRGYVP 277
           GLAKTKHYSEV  LY RM LAG  PNYI LNILLNCLC+ NR+SEGLAAMAGI+RRG++P
Sbjct: 121 GLAKTKHYSEVLKLYYRMSLAGLLPNYITLNILLNCLCNVNRISEGLAAMAGIIRRGFIP 180

Query: 278 NIVTYTSLIKGLCMEGKISQATHIFMRMQKLGCRPNVVTYGTLIKGLCQTGNTNIALKLH 337
           NIVTYTSLIKGLCME +IS+AT +FMRMQKLGCRPNV+TYGTLIKGLCQTGNTNIALKLH
Sbjct: 181 NIVTYTSLIKGLCMEHRISEATRLFMRMQKLGCRPNVITYGTLIKGLCQTGNTNIALKLH 240

Query: 338 GELIDGSGRYGISCKPNVICYSIIIDSLCKEGREDRAGELFEEMKARGLVPDVIAYSSLI 397
            E+++G+GRYGISCKPNVI YS IID LCK+GRED+A ELFEEMKAR ++PDVI+YSSLI
Sbjct: 241 EEMLNGTGRYGISCKPNVISYSTIIDGLCKDGREDKARELFEEMKARRMLPDVISYSSLI 300

Query: 398 HGFGFGGKLDEAKRLFNEMMDQGIRPNVVTFNVFLGILCKAGKVIEANELFEIMIKRGIV 457
           HGF  GGK +EAK LFNEM+D GI+PN VTFNV + ILCKAGKVIEANEL E+MI+RG V
Sbjct: 301 HGFCNGGKWEEAKCLFNEMVDLGIQPNAVTFNVLMDILCKAGKVIEANELLEVMIQRGNV 360

Query: 458 PDLFTYNTLIDGFCLVGDLNGAKELFVSMASNGCEPDVISYNVLINGYCKNWKVEEAMNI 517
           PDLFTYNTL+DGFCLV DL+ A+ELF+SM S GCEP+VISYNVLINGYCKNWKVEEAM I
Sbjct: 361 PDLFTYNTLMDGFCLVSDLDSARELFLSMPSKGCEPNVISYNVLINGYCKNWKVEEAMKI 420

Query: 518 YNEMLQVGIKPSVITYNSLLTGLFQAGKVADARKIFGVIQDHGQLPSSCTFNIFLDGLCK 577
           YNEMLQVGIKPSVITYN+LLTGLFQAGKV DA+KIFGVIQ HG +PSS T +IF+DGLCK
Sbjct: 421 YNEMLQVGIKPSVITYNALLTGLFQAGKVNDAKKIFGVIQAHGLVPSSSTLSIFVDGLCK 480

Query: 578 NGCLLEAMEIYNELPYNMKSNIDIFNSIIDGLCKAGKLETAWEIFEKLSQEGLLSNVVTY 637
           N CLLEAMEI+NEL YN+K +IDIFN +IDGLCKAGKLETAWE F+K+S+EGLL NVVTY
Sbjct: 481 NDCLLEAMEIFNELSYNLKLDIDIFNCLIDGLCKAGKLETAWEFFDKISREGLLPNVVTY 540

Query: 638 NIMIHGCFKERQKEKANDLFEKMEANGCTPNLVTYNILLRGFYESDKPEEVVKLLHRMAK 697
           +I+IHGC KE Q EKANDLF KME NGCTPN++TYN LLRGFY+S+K EEVV+LLHRM K
Sbjct: 541 SILIHGCCKEGQVEKANDLFRKMEENGCTPNVITYNTLLRGFYKSNKREEVVELLHRMVK 600

Query: 698 KNVLPDASTCTLVLEMLSKDEKYRSYVDLLPKFPVEECR 720
           KNV+PDASTCT+VL+MLSKDEKYR  ++LLP FPV+E R
Sbjct: 601 KNVVPDASTCTIVLDMLSKDEKYRGCLNLLPMFPVQEYR 639

[Close]

BLAST of Sed0021875 vs. NCBI nr
Match: XP_023548637.1 (pentatricopeptide repeat-containing protein At1g63330-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 950.3 bits (2455), Expect = 9.7e-273
Identity = 475/640 (74.22%), Postives = 539/640 (84.22%), Query Frame = 0


Query: 98  MASKTAASAISSSFSPTPSTLKLSSLFSQSPKISSLNPKNPSP----------NPTKSTA 157
           M SKT ASAISSS SP PS  KLSSL ++  +I+S NP+N SP           P  S  
Sbjct: 1   MVSKTVASAISSSLSPAPSKGKLSSLVTRPLRIASSNPQNLSPIPAESPPIISKPPNSNV 60

Query: 158 SP----EESTTGDSL---LQTFLQNCKAGNISASEALHFFDQMLSLKPAPDMSSFNLVLG 217
           SP    E+STT  S    L+TFLQNCK GN +ASEA  FFD M+   P P MSSFNL+LG
Sbjct: 61  SPEVSLEKSTTEISFHERLRTFLQNCKTGNFTASEAFQFFDLMMLANPTPAMSSFNLLLG 120

Query: 218 GLAKTKHYSEVFLLYNRMKLAGFFPNYIMLNILLNCLCHTNRVSEGLAAMAGILRRGYVP 277
           GLAKTKHYSEV  LY RM LAG  PNYI LNILLNCLC+ NR+SEGLAAMAGI+RRG++P
Sbjct: 121 GLAKTKHYSEVLKLYYRMSLAGLLPNYITLNILLNCLCNVNRISEGLAAMAGIIRRGFIP 180

Query: 278 NIVTYTSLIKGLCMEGKISQATHIFMRMQKLGCRPNVVTYGTLIKGLCQTGNTNIALKLH 337
           NIVTYTSLIKGLCME +IS+AT +FMRMQKLGCRPNV+TYGTLIKGLCQTGNTNIALKLH
Sbjct: 181 NIVTYTSLIKGLCMEHRISEATRLFMRMQKLGCRPNVITYGTLIKGLCQTGNTNIALKLH 240

Query: 338 GELIDGSGRYGISCKPNVICYSIIIDSLCKEGREDRAGELFEEMKARGLVPDVIAYSSLI 397
            E+++G+GRYGISCKPNVICYS IID LCK+GRED+A ELFEEMKAR ++PDVI+YSSLI
Sbjct: 241 EEMLNGTGRYGISCKPNVICYSTIIDGLCKDGREDKARELFEEMKARRMLPDVISYSSLI 300

Query: 398 HGFGFGGKLDEAKRLFNEMMDQGIRPNVVTFNVFLGILCKAGKVIEANELFEIMIKRGIV 457
           HGF  GGK +EAK LFNEM+D GI+PN VTFNV + ILCKAGKVIEANEL E+MI+RG  
Sbjct: 301 HGFCNGGKWEEAKCLFNEMVDLGIQPNAVTFNVLMDILCKAGKVIEANELLEVMIQRGNA 360

Query: 458 PDLFTYNTLIDGFCLVGDLNGAKELFVSMASNGCEPDVISYNVLINGYCKNWKVEEAMNI 517
           PDLFTYNTL+DGFCLV DL+ A+ELF+SM S GCEP+VISYNVLINGYCKNWKVEEAM I
Sbjct: 361 PDLFTYNTLMDGFCLVSDLDSARELFLSMPSKGCEPNVISYNVLINGYCKNWKVEEAMKI 420

Query: 518 YNEMLQVGIKPSVITYNSLLTGLFQAGKVADARKIFGVIQDHGQLPSSCTFNIFLDGLCK 577
           YNEMLQVGIKPSVITYN+LLTGLFQAGKV DA+KIFGVIQ HG +PSS T +IF+DGLCK
Sbjct: 421 YNEMLQVGIKPSVITYNALLTGLFQAGKVDDAKKIFGVIQAHGLVPSSSTLSIFVDGLCK 480

Query: 578 NGCLLEAMEIYNELPYNMKSNIDIFNSIIDGLCKAGKLETAWEIFEKLSQEGLLSNVVTY 637
           N CLLEAMEI+NEL YN+K +IDIFN +IDGLCKAGKLETAWE F+K+S+EGLL NVVTY
Sbjct: 481 NDCLLEAMEIFNELSYNLKLDIDIFNCLIDGLCKAGKLETAWEFFDKISREGLLPNVVTY 540

Query: 638 NIMIHGCFKERQKEKANDLFEKMEANGCTPNLVTYNILLRGFYESDKPEEVVKLLHRMAK 697
           +I+IHG  KE Q EKANDLF KME NGCTPN++TYN LLRGFY+S+K EEVV+LLHRM K
Sbjct: 541 SILIHGYCKEGQVEKANDLFRKMEENGCTPNVITYNTLLRGFYKSNKREEVVELLHRMVK 600

Query: 698 KNVLPDASTCTLVLEMLSKDEKYRSYVDLLPKFPVEECRG 721
           KNV+PDASTCT+VL+MLSKDEKYR  ++LLP FPV+E RG
Sbjct: 601 KNVVPDASTCTIVLDMLSKDEKYRGCLNLLPTFPVQEYRG 640

[Close]

BLAST of Sed0021875 vs. NCBI nr
Match: XP_022992036.1 (pentatricopeptide repeat-containing protein At1g63330-like [Cucurbita maxima])

HSP 1 Score: 947.6 bits (2448), Expect = 6.3e-272
Identity = 472/640 (73.75%), Postives = 535/640 (83.59%), Query Frame = 0


Query: 98  MASKTAASAISSSFSPTPSTLKLSSLFSQSPKISSLNPKNPSP----------NPTKSTA 157
           M SKT ASAISSS  P PS  KLSSLF+    I+S  P+NPSP           P  S  
Sbjct: 1   MVSKTVASAISSSLLPAPSKGKLSSLFTHPTIIASSKPQNPSPISAESPPVISKPPNSNV 60

Query: 158 SP----EESTTGDSL---LQTFLQNCKAGNISASEALHFFDQMLSLKPAPDMSSFNLVLG 217
           SP    E+STT  S    L+TFLQNCK GN + SEAL FFD M+   P P MSSFNL+LG
Sbjct: 61  SPEVSLEKSTTEISFHERLRTFLQNCKTGNFTVSEALQFFDLMMLANPTPAMSSFNLLLG 120

Query: 218 GLAKTKHYSEVFLLYNRMKLAGFFPNYIMLNILLNCLCHTNRVSEGLAAMAGILRRGYVP 277
           GLAKTKHYSEV  LY RM LAG  PNYI LNILLNCLC+ NR+SEGLAAMAGI+RRGYVP
Sbjct: 121 GLAKTKHYSEVLKLYYRMSLAGLLPNYITLNILLNCLCNVNRISEGLAAMAGIIRRGYVP 180

Query: 278 NIVTYTSLIKGLCMEGKISQATHIFMRMQKLGCRPNVVTYGTLIKGLCQTGNTNIALKLH 337
           NIVTYTSLIKGLCME +IS+AT +FMRMQKLGCRPNV+TYGTLIKGLCQTGNTNIALKLH
Sbjct: 181 NIVTYTSLIKGLCMEHRISEATRLFMRMQKLGCRPNVITYGTLIKGLCQTGNTNIALKLH 240

Query: 338 GELIDGSGRYGISCKPNVICYSIIIDSLCKEGREDRAGELFEEMKARGLVPDVIAYSSLI 397
            E+++G+GRYGISCKPNVICYS IID LCK+GRED+A ELFEEMKAR ++PDVI+YSSLI
Sbjct: 241 EEMLNGTGRYGISCKPNVICYSTIIDGLCKDGREDKARELFEEMKARRMLPDVISYSSLI 300

Query: 398 HGFGFGGKLDEAKRLFNEMMDQGIRPNVVTFNVFLGILCKAGKVIEANELFEIMIKRGIV 457
           HGF  GGK +EAK LFNEM+D GI+PN VTFNV + ILCKAGKVIEAN+L E+MI+RG V
Sbjct: 301 HGFCNGGKWEEAKCLFNEMVDLGIQPNAVTFNVLMDILCKAGKVIEANKLLEVMIQRGNV 360

Query: 458 PDLFTYNTLIDGFCLVGDLNGAKELFVSMASNGCEPDVISYNVLINGYCKNWKVEEAMNI 517
           PDLF YNTL+DGFCLV DL  A+ELF+SM S GCEP+VISYNVLINGYCKNWKVEEAM I
Sbjct: 361 PDLFIYNTLMDGFCLVSDLESARELFLSMPSKGCEPNVISYNVLINGYCKNWKVEEAMKI 420

Query: 518 YNEMLQVGIKPSVITYNSLLTGLFQAGKVADARKIFGVIQDHGQLPSSCTFNIFLDGLCK 577
           YNEMLQVG+KPSVITYN+LLTGLFQAGKV DA+KIFGVIQ HG +PSS T +IF+DGLCK
Sbjct: 421 YNEMLQVGVKPSVITYNALLTGLFQAGKVDDAKKIFGVIQAHGLVPSSSTLSIFVDGLCK 480

Query: 578 NGCLLEAMEIYNELPYNMKSNIDIFNSIIDGLCKAGKLETAWEIFEKLSQEGLLSNVVTY 637
           N CLLEAMEI+NEL YN+K +IDIFN +IDGLCKAGKLETAWE F+K+S+EG L NVVTY
Sbjct: 481 NDCLLEAMEIFNELSYNLKLDIDIFNCLIDGLCKAGKLETAWEFFDKISREGFLPNVVTY 540

Query: 638 NIMIHGCFKERQKEKANDLFEKMEANGCTPNLVTYNILLRGFYESDKPEEVVKLLHRMAK 697
           +I+IHGC KE Q EKANDLF KME NGCTPN++TYN LLRGFY+S+K EEVV+LLHRM  
Sbjct: 541 SILIHGCCKEGQVEKANDLFRKMEENGCTPNVITYNTLLRGFYKSNKREEVVELLHRMVN 600

Query: 698 KNVLPDASTCTLVLEMLSKDEKYRSYVDLLPKFPVEECRG 721
           KNV+PDASTCT+VL+MLS+DEKYR  ++LLP FPV++ RG
Sbjct: 601 KNVVPDASTCTIVLDMLSEDEKYRGCLNLLPTFPVQDYRG 640

[Close]

BLAST of Sed0021875 vs. ExPASy Swiss-Prot
Match: Q6NQ83 (Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g22470 PE=1 SV=1)

HSP 1 Score: 409.1 bits (1050), Expect = 1.1e-112
Identity = 212/571 (37.13%), Postives = 331/571 (57.97%), Query Frame = 0


Query: 170 NISASEALHFFDQMLSLKPAPDMSSFNLVLGGLAKTKHYSEVFLLYNRMKLAGFFPNYIM 229
           +I  ++A+  F+ M+  +P P    FN +   +A+TK Y  V      M+L G   +   
Sbjct: 48  DIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYT 107

Query: 230 LNILLNCLCHTNRVSEGLAAMAGILRRGYVPNIVTYTSLIKGLCMEGKISQATHIFMRMQ 289
           + I++NC C   ++    + +    + GY P+ +T+++L+ G C+EG++S+A  +  RM 
Sbjct: 108 MTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMV 167

Query: 290 KLGCRPNVVTYGTLIKGLCQTGNTNIALKLHGELID------------------GSGRYG 349
           ++  RP++VT  TLI GLC  G  + AL L   +++                   SG   
Sbjct: 168 EMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSA 227

Query: 350 I-----------SCKPNVICYSIIIDSLCKEGREDRAGELFEEMKARGLVPDVIAYSSLI 409
           +           + K +V+ YSI+IDSLCK+G  D A  LF EM+ +G+  DV+ YSSLI
Sbjct: 228 LALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLI 287

Query: 410 HGFGFGGKLDEAKRLFNEMMDQGIRPNVVTFNVFLGILCKAGKVIEANELFEIMIKRGIV 469
            G    GK D+  ++  EM+ + I P+VVTF+  + +  K GK++EA EL+  MI RGI 
Sbjct: 288 GGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIA 347

Query: 470 PDLFTYNTLIDGFCLVGDLNGAKELFVSMASNGCEPDVISYNVLINGYCKNWKVEEAMNI 529
           PD  TYN+LIDGFC    L+ A ++F  M S GCEPD+++Y++LIN YCK  +V++ M +
Sbjct: 348 PDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRL 407

Query: 530 YNEMLQVGIKPSVITYNSLLTGLFQAGKVADARKIFGVIQDHGQLPSSCTFNIFLDGLCK 589
           + E+   G+ P+ ITYN+L+ G  Q+GK+  A+++F  +   G  PS  T+ I LDGLC 
Sbjct: 408 FREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCD 467

Query: 590 NGCLLEAMEIYNELPYN-MKSNIDIFNSIIDGLCKAGKLETAWEIFEKLSQEGLLSNVVT 649
           NG L +A+EI+ ++  + M   I I+N II G+C A K++ AW +F  LS +G+  +VVT
Sbjct: 468 NGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVT 527

Query: 650 YNIMIHGCFKERQKEKANDLFEKMEANGCTPNLVTYNILLRGFYESDKPEEVVKLLHRMA 709
           YN+MI G  K+    +A+ LF KM+ +GCTP+  TYNIL+R           V+L+  M 
Sbjct: 528 YNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMK 587

Query: 710 KKNVLPDASTCTLVLEMLSKDEKYRSYVDLL 711
                 D+ST  +V++MLS     +S++D+L
Sbjct: 588 VCGFSADSSTIKMVIDMLSDRRLDKSFLDML 618

[Close]

BLAST of Sed0021875 vs. ExPASy Swiss-Prot
Match: P0C7Q7 (Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12700 PE=3 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 1.2e-111
Identity = 202/552 (36.59%), Postives = 329/552 (59.60%), Query Frame = 0


Query: 162 FLQNCKAG--NISASEALHFFDQMLSLKPAPDMSSFNLVLGGLAKTKHYSEVFLLYNRMK 221
           F +  ++G  +I   +A+  F +M+  +P P +  F+     +A+TK ++ V     +++
Sbjct: 56  FRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLE 115

Query: 222 LAGFFPNYIMLNILLNCLCHTNRVSEGLAAMAGILRRGYVPNIVTYTSLIKGLCMEGKIS 281
           L G   N   LNI++NC C   +     + +  +++ GY P+  T+ +LIKGL +EGK+S
Sbjct: 116 LNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVS 175

Query: 282 QATHIFMRMQKLGCRPNVVTYGTLIKGLCQTGNTNIALKLHGELIDGSGRYGISCKPNVI 341
           +A  +  RM + GC+P+VVTY +++ G+C++G+T++AL L  ++ +       + K +V 
Sbjct: 176 EAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEER------NVKADVF 235

Query: 342 CYSIIIDSLCKEGREDRAGELFEEMKARGLVPDVIAYSSLIHGFGFGGKLDEAKRLFNEM 401
            YS IIDSLC++G  D A  LF+EM+ +G+   V+ Y+SL+ G    GK ++   L  +M
Sbjct: 236 TYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDM 295

Query: 402 MDQGIRPNVVTFNVFLGILCKAGKVIEANELFEIMIKRGIVPDLFTYNTLIDGFCLVGDL 461
           + + I PNV+TFNV L +  K GK+ EANEL++ MI RGI P++ TYNTL+DG+C+   L
Sbjct: 296 VSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRL 355

Query: 462 NGAKELFVSMASNGCEPDVISYNVLINGYCKNWKVEEAMNIYNEMLQVGIKPSVITYNSL 521
           + A  +   M  N C PD++++  LI GYC   +V++ M ++  + + G+  + +TY+ L
Sbjct: 356 SEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSIL 415

Query: 522 LTGLFQAGKVADARKIFGVIQDHGQLPSSCTFNIFLDGLCKNGCLLEAMEIYNELPYN-M 581
           + G  Q+GK+  A ++F  +  HG LP   T+ I LDGLC NG L +A+EI+ +L  + M
Sbjct: 416 VQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 475

Query: 582 KSNIDIFNSIIDGLCKAGKLETAWEIFEKLSQEGLLSNVVTYNIMIHGCFKERQKEKAND 641
              I ++ +II+G+CK GK+E AW +F  L  +G+  NV+TY +MI G  K+    +AN 
Sbjct: 476 DLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANI 535

Query: 642 LFEKMEANGCTPNLVTYNILLRGFYESDKPEEVVKLLHRMAKKNVLPDASTCTLVLEMLS 701
           L  KME +G  PN  TYN L+R            KL+  M       DAS+  +V++ML 
Sbjct: 536 LLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLL 595

Query: 702 KDEKYRSYVDLL 711
             E  +S++D+L
Sbjct: 596 SGELDKSFLDML 601

[Close]

BLAST of Sed0021875 vs. ExPASy Swiss-Prot
Match: Q0WKV3 (Pentatricopeptide repeat-containing protein At1g12300, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12300 PE=2 SV=1)

HSP 1 Score: 396.0 bits (1016), Expect = 9.3e-109
Identity = 211/577 (36.57%), Postives = 328/577 (56.85%), Query Frame = 0


Query: 170 NISASEALHFFDQMLSLKPAPDMSSFNLVLGGLAKTKHYSEVFLLYNRMKLAGFFPNYIM 229
           +I A +A+  F  M+  +P P +  F+ +   +AKTK Y  V  L  +M+L G   N   
Sbjct: 66  DIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYT 125

Query: 230 LNILLNCLCHTNRVSEGLAAMAGILRRGYVPNIVTYTSLIKGLCMEGKISQATHIFMRMQ 289
           L+I++NC C   ++    +AM  I++ GY PN +T+++LI GLC+EG++S+A  +  RM 
Sbjct: 126 LSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMV 185

Query: 290 KLGCRPNVVTYGTLIKGLCQTGNTNIALKLHGELIDGSGRYGISCKP---------NVIC 349
           ++G +P+++T  TL+ GLC +G    A+     LID    YG  C+P         NV+C
Sbjct: 186 EMGHKPDLITINTLVNGLCLSGKEAEAML----LIDKMVEYG--CQPNAVTYGPVLNVMC 245

Query: 350 --------------------------YSIIIDSLCKEGREDRAGELFEEMKARGLVPDVI 409
                                     YSIIID LCK G  D A  LF EM+ +G+  ++I
Sbjct: 246 KSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNII 305

Query: 410 AYSSLIHGFGFGGKLDEAKRLFNEMMDQGIRPNVVTFNVFLGILCKAGKVIEANELFEIM 469
            Y+ LI GF   G+ D+  +L  +M+ + I PNVVTF+V +    K GK+ EA EL + M
Sbjct: 306 TYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEM 365

Query: 470 IKRGIVPDLFTYNTLIDGFCLVGDLNGAKELFVSMASNGCEPDVISYNVLINGYCKNWKV 529
           I RGI PD  TY +LIDGFC    L+ A ++   M S GC+P++ ++N+LINGYCK  ++
Sbjct: 366 IHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRI 425

Query: 530 EEAMNIYNEMLQVGIKPSVITYNSLLTGLFQAGKVADARKIFGVIQDHGQLPSSCTFNIF 589
           ++ + ++ +M   G+    +TYN+L+ G  + GK+  A+++F  +      P+  T+ I 
Sbjct: 426 DDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKIL 485

Query: 590 LDGLCKNGCLLEAMEIYNELPYN-MKSNIDIFNSIIDGLCKAGKLETAWEIFEKLSQEGL 649
           LDGLC NG   +A+EI+ ++  + M+ +I I+N II G+C A K++ AW++F  L  +G+
Sbjct: 486 LDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGV 545

Query: 650 LSNVVTYNIMIHGCFKERQKEKANDLFEKMEANGCTPNLVTYNILLRGFYESDKPEEVVK 709
              V TYNIMI G  K+    +A  LF KME +G  P+  TYNIL+R         + VK
Sbjct: 546 KPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVK 605

Query: 710 LLHRMAKKNVLPDASTCTLVLEMLSKDEKYRSYVDLL 711
           L+  + +     DAST  +V++MLS     +S++D+L
Sbjct: 606 LIEELKRCGFSVDASTIKMVIDMLSDGRLKKSFLDML 636

[Close]

BLAST of Sed0021875 vs. ExPASy Swiss-Prot
Match: Q9SXD8 (Pentatricopeptide repeat-containing protein At1g62590 OS=Arabidopsis thaliana OX=3702 GN=At1g62590 PE=2 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 7.9e-108
Identity = 197/531 (37.10%), Postives = 321/531 (60.45%), Query Frame = 0


Query: 181 DQMLSLKPAPDMSSFNLVLGGLAKTKHYSEVFLLYNRMKLAGFFPNYIMLNILLNCLCHT 240
           ++M  L+    + ++N+++    +    S    L  +M   G+ P+ + L+ LLN  CH 
Sbjct: 109 EKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHG 168

Query: 241 NRVSEGLAAMAGILRRGYVPNIVTYTSLIKGLCMEGKISQATHIFMRMQKLGCRPNVVTY 300
            R+S+ +A +  ++  GY P+ +T+T+LI GL +  K S+A  +  RM + GC+PN+VTY
Sbjct: 169 KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 228

Query: 301 GTLIKGLCQTGNTNIALKLHGELIDGSGRYGISCKPNVICYSIIIDSLCKEGREDRAGEL 360
           G ++ GLC+ G+T++AL L  ++           + +V+ ++ IIDSLCK    D A  L
Sbjct: 229 GVVVNGLCKRGDTDLALNLLNKM------EAAKIEADVVIFNTIIDSLCKYRHVDDALNL 288

Query: 361 FEEMKARGLVPDVIAYSSLIHGFGFGGKLDEAKRLFNEMMDQGIRPNVVTFNVFLGILCK 420
           F+EM+ +G+ P+V+ YSSLI      G+  +A +L ++M+++ I PN+VTFN  +    K
Sbjct: 289 FKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVK 348

Query: 421 AGKVIEANELFEIMIKRGIVPDLFTYNTLIDGFCLVGDLNGAKELFVSMASNGCEPDVIS 480
            GK +EA +L++ MIKR I PD+FTYN+L++GFC+   L+ AK++F  M S  C PDV++
Sbjct: 349 EGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVT 408

Query: 481 YNVLINGYCKNWKVEEAMNIYNEMLQVGIKPSVITYNSLLTGLFQAGKVADARKIFGVIQ 540
           YN LI G+CK+ +VE+   ++ EM   G+    +TY +L+ GLF  G   +A+K+F  + 
Sbjct: 409 YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 468

Query: 541 DHGQLPSSCTFNIFLDGLCKNGCLLEAMEIYNELPYN-MKSNIDIFNSIIDGLCKAGKLE 600
             G  P   T++I LDGLC NG L +A+E+++ +  + +K +I I+ ++I+G+CKAGK++
Sbjct: 469 SDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVD 528

Query: 601 TAWEIFEKLSQEGLLSNVVTYNIMIHGCFKERQKEKANDLFEKMEANGCTPNLVTYNILL 660
             W++F  LS +G+  NVVTYN MI G   +R  ++A  L +KM+ +G  PN  TYN L+
Sbjct: 529 DGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLI 588

Query: 661 RGFYESDKPEEVVKLLHRMAKKNVLPDASTCTLVLEMLSKDEKYRSYVDLL 711
           R            +L+  M     + DAST  LV  ML      +S++D+L
Sbjct: 589 RAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGRLDKSFLDML 633

[Close]

BLAST of Sed0021875 vs. ExPASy Swiss-Prot
Match: Q9LQ16 (Pentatricopeptide repeat-containing protein At1g62910 OS=Arabidopsis thaliana OX=3702 GN=At1g62910 PE=2 SV=1)

HSP 1 Score: 391.3 bits (1004), Expect = 2.3e-107
Identity = 203/531 (38.23%), Postives = 320/531 (60.26%), Query Frame = 0


Query: 181 DQMLSLKPAPDMSSFNLVLGGLAKTKHYSEVFLLYNRMKLAGFFPNYIMLNILLNCLCHT 240
           +QM +L  + D+ ++++ +    +    S    +  +M   G+ P+ + L+ LLN  CH+
Sbjct: 107 EQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHS 166

Query: 241 NRVSEGLAAMAGILRRGYVPNIVTYTSLIKGLCMEGKISQATHIFMRMQKLGCRPNVVTY 300
            R+S+ +A +  ++  GY P+  T+T+LI GL +  K S+A  +  +M + GC+P++VTY
Sbjct: 167 KRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTY 226

Query: 301 GTLIKGLCQTGNTNIALKLHGELIDGSGRYGISCKPNVICYSIIIDSLCKEGREDRAGEL 360
           GT++ GLC+ G+ ++AL L  ++  G        + +V+ Y+ IID LCK    D A  L
Sbjct: 227 GTVVNGLCKRGDIDLALSLLKKMEKG------KIEADVVIYNTIIDGLCKYKHMDDALNL 286

Query: 361 FEEMKARGLVPDVIAYSSLIHGFGFGGKLDEAKRLFNEMMDQGIRPNVVTFNVFLGILCK 420
           F EM  +G+ PDV  YSSLI      G+  +A RL ++M+++ I PNVVTF+  +    K
Sbjct: 287 FTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK 346

Query: 421 AGKVIEANELFEIMIKRGIVPDLFTYNTLIDGFCLVGDLNGAKELFVSMASNGCEPDVIS 480
            GK++EA +L++ MIKR I PD+FTY++LI+GFC+   L+ AK +F  M S  C P+V++
Sbjct: 347 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 406

Query: 481 YNVLINGYCKNWKVEEAMNIYNEMLQVGIKPSVITYNSLLTGLFQAGKVADARKIFGVIQ 540
           Y+ LI G+CK  +VEE M ++ EM Q G+  + +TY +L+ G FQA    +A+ +F  + 
Sbjct: 407 YSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 466

Query: 541 DHGQLPSSCTFNIFLDGLCKNGCLLEAMEIYNELPYN-MKSNIDIFNSIIDGLCKAGKLE 600
             G  P+  T+NI LDGLCKNG L +AM ++  L  + M+ +I  +N +I+G+CKAGK+E
Sbjct: 467 SVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVE 526

Query: 601 TAWEIFEKLSQEGLLSNVVTYNIMIHGCFKERQKEKANDLFEKMEANGCTPNLVTYNILL 660
             WE+F  LS +G+  NV+ YN MI G  ++  KE+A+ L +KM+ +G  PN  TYN L+
Sbjct: 527 DGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLI 586

Query: 661 RGFYESDKPEEVVKLLHRMAKKNVLPDASTCTLVLEMLSKDEKYRSYVDLL 711
           R        E   +L+  M       DAST  LV  ML      +S++D+L
Sbjct: 587 RARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSFLDML 631

[Close]

BLAST of Sed0021875 vs. ExPASy TrEMBL
Match: A0A6J1GP31 (putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111456184 PE=4 SV=1)

HSP 1 Score: 957.6 bits (2474), Expect = 3.0e-275
Identity = 477/640 (74.53%), Postives = 541/640 (84.53%), Query Frame = 0


Query: 98  MASKTAASAISSSFSPTPSTLKLSSLFSQSPKISSLNPKNPSP----------NPTKSTA 157
           M  KT ASAISSS SP PS  KLSSLF++ P I+S NP+NPSP           P  S  
Sbjct: 1   MVPKTVASAISSSLSPAPSKGKLSSLFTRPPIIASSNPQNPSPIPAESPPIISKPPNSNV 60

Query: 158 SP----EESTTGDSL---LQTFLQNCKAGNISASEALHFFDQMLSLKPAPDMSSFNLVLG 217
           SP    E+STT  S    L+TFLQNCK GN + SEAL FFD M+   P P MSSFNL+LG
Sbjct: 61  SPEVSLEKSTTEISFHGRLRTFLQNCKTGNFTVSEALQFFDLMMLANPTPAMSSFNLLLG 120

Query: 218 GLAKTKHYSEVFLLYNRMKLAGFFPNYIMLNILLNCLCHTNRVSEGLAAMAGILRRGYVP 277
           GLAKTKHYSEV  LY RM LAG  PNYI LNILLNCLC+ NR+SEGLAAMAGI+RRG++P
Sbjct: 121 GLAKTKHYSEVLKLYYRMSLAGLLPNYITLNILLNCLCNVNRISEGLAAMAGIIRRGFIP 180

Query: 278 NIVTYTSLIKGLCMEGKISQATHIFMRMQKLGCRPNVVTYGTLIKGLCQTGNTNIALKLH 337
           NIVTYTSLIKGLCME +IS+AT +FMRMQKLGCRPNV+TYGTLIKGLCQTGNTNIALKLH
Sbjct: 181 NIVTYTSLIKGLCMEHRISEATRLFMRMQKLGCRPNVITYGTLIKGLCQTGNTNIALKLH 240

Query: 338 GELIDGSGRYGISCKPNVICYSIIIDSLCKEGREDRAGELFEEMKARGLVPDVIAYSSLI 397
            E+++G+GRYGISCKPNVI YS IID LCK+GRED+A ELFEEMKAR ++PDVI+YSSLI
Sbjct: 241 EEMLNGTGRYGISCKPNVISYSTIIDGLCKDGREDKARELFEEMKARRMLPDVISYSSLI 300

Query: 398 HGFGFGGKLDEAKRLFNEMMDQGIRPNVVTFNVFLGILCKAGKVIEANELFEIMIKRGIV 457
           HGF  GGK +EAK LFNEM+D GI+PN VTFNV + ILCKAGKVIEANEL E+MI+RG V
Sbjct: 301 HGFCNGGKWEEAKCLFNEMVDLGIQPNAVTFNVLMDILCKAGKVIEANELLEVMIQRGNV 360

Query: 458 PDLFTYNTLIDGFCLVGDLNGAKELFVSMASNGCEPDVISYNVLINGYCKNWKVEEAMNI 517
           PDLFTYNTL+DGFCLV DL+ A+ELF+SM S GCEP+VISYNVLINGYCKNWKVEEAM I
Sbjct: 361 PDLFTYNTLMDGFCLVSDLDSARELFLSMPSKGCEPNVISYNVLINGYCKNWKVEEAMKI 420

Query: 518 YNEMLQVGIKPSVITYNSLLTGLFQAGKVADARKIFGVIQDHGQLPSSCTFNIFLDGLCK 577
           YNEMLQVGIKPS+ITYN+LLTGLFQAGKV DA+KIFGVIQ HG +PSS T +IF+DGLCK
Sbjct: 421 YNEMLQVGIKPSMITYNALLTGLFQAGKVNDAKKIFGVIQAHGLVPSSSTLSIFVDGLCK 480

Query: 578 NGCLLEAMEIYNELPYNMKSNIDIFNSIIDGLCKAGKLETAWEIFEKLSQEGLLSNVVTY 637
           N CLLEAMEI+NEL YN+K +IDIFN +IDGLCKAGKLETAWE F+K+S+EGLL NVVTY
Sbjct: 481 NDCLLEAMEIFNELSYNLKLDIDIFNCLIDGLCKAGKLETAWEFFDKISREGLLPNVVTY 540

Query: 638 NIMIHGCFKERQKEKANDLFEKMEANGCTPNLVTYNILLRGFYESDKPEEVVKLLHRMAK 697
           +I+IHGC KE Q EKANDLF KME NGCTPN++TYN LLRGFY+S+K EEVV+LLHRM K
Sbjct: 541 SILIHGCCKEGQVEKANDLFRKMEENGCTPNVITYNTLLRGFYKSNKREEVVELLHRMVK 600

Query: 698 KNVLPDASTCTLVLEMLSKDEKYRSYVDLLPKFPVEECRG 721
           KNV+PDASTCT+VL+MLSKDEKYR  ++LLP FPV+E RG
Sbjct: 601 KNVVPDASTCTIVLDMLSKDEKYRGCLNLLPTFPVQEYRG 640

[Close]

BLAST of Sed0021875 vs. ExPASy TrEMBL
Match: A0A6J1JSG4 (pentatricopeptide repeat-containing protein At1g63330-like OS=Cucurbita maxima OX=3661 GN=LOC111488506 PE=4 SV=1)

HSP 1 Score: 947.6 bits (2448), Expect = 3.1e-272
Identity = 472/640 (73.75%), Postives = 535/640 (83.59%), Query Frame = 0


Query: 98  MASKTAASAISSSFSPTPSTLKLSSLFSQSPKISSLNPKNPSP----------NPTKSTA 157
           M SKT ASAISSS  P PS  KLSSLF+    I+S  P+NPSP           P  S  
Sbjct: 1   MVSKTVASAISSSLLPAPSKGKLSSLFTHPTIIASSKPQNPSPISAESPPVISKPPNSNV 60

Query: 158 SP----EESTTGDSL---LQTFLQNCKAGNISASEALHFFDQMLSLKPAPDMSSFNLVLG 217
           SP    E+STT  S    L+TFLQNCK GN + SEAL FFD M+   P P MSSFNL+LG
Sbjct: 61  SPEVSLEKSTTEISFHERLRTFLQNCKTGNFTVSEALQFFDLMMLANPTPAMSSFNLLLG 120

Query: 218 GLAKTKHYSEVFLLYNRMKLAGFFPNYIMLNILLNCLCHTNRVSEGLAAMAGILRRGYVP 277
           GLAKTKHYSEV  LY RM LAG  PNYI LNILLNCLC+ NR+SEGLAAMAGI+RRGYVP
Sbjct: 121 GLAKTKHYSEVLKLYYRMSLAGLLPNYITLNILLNCLCNVNRISEGLAAMAGIIRRGYVP 180

Query: 278 NIVTYTSLIKGLCMEGKISQATHIFMRMQKLGCRPNVVTYGTLIKGLCQTGNTNIALKLH 337
           NIVTYTSLIKGLCME +IS+AT +FMRMQKLGCRPNV+TYGTLIKGLCQTGNTNIALKLH
Sbjct: 181 NIVTYTSLIKGLCMEHRISEATRLFMRMQKLGCRPNVITYGTLIKGLCQTGNTNIALKLH 240

Query: 338 GELIDGSGRYGISCKPNVICYSIIIDSLCKEGREDRAGELFEEMKARGLVPDVIAYSSLI 397
            E+++G+GRYGISCKPNVICYS IID LCK+GRED+A ELFEEMKAR ++PDVI+YSSLI
Sbjct: 241 EEMLNGTGRYGISCKPNVICYSTIIDGLCKDGREDKARELFEEMKARRMLPDVISYSSLI 300

Query: 398 HGFGFGGKLDEAKRLFNEMMDQGIRPNVVTFNVFLGILCKAGKVIEANELFEIMIKRGIV 457
           HGF  GGK +EAK LFNEM+D GI+PN VTFNV + ILCKAGKVIEAN+L E+MI+RG V
Sbjct: 301 HGFCNGGKWEEAKCLFNEMVDLGIQPNAVTFNVLMDILCKAGKVIEANKLLEVMIQRGNV 360

Query: 458 PDLFTYNTLIDGFCLVGDLNGAKELFVSMASNGCEPDVISYNVLINGYCKNWKVEEAMNI 517
           PDLF YNTL+DGFCLV DL  A+ELF+SM S GCEP+VISYNVLINGYCKNWKVEEAM I
Sbjct: 361 PDLFIYNTLMDGFCLVSDLESARELFLSMPSKGCEPNVISYNVLINGYCKNWKVEEAMKI 420

Query: 518 YNEMLQVGIKPSVITYNSLLTGLFQAGKVADARKIFGVIQDHGQLPSSCTFNIFLDGLCK 577
           YNEMLQVG+KPSVITYN+LLTGLFQAGKV DA+KIFGVIQ HG +PSS T +IF+DGLCK
Sbjct: 421 YNEMLQVGVKPSVITYNALLTGLFQAGKVDDAKKIFGVIQAHGLVPSSSTLSIFVDGLCK 480

Query: 578 NGCLLEAMEIYNELPYNMKSNIDIFNSIIDGLCKAGKLETAWEIFEKLSQEGLLSNVVTY 637
           N CLLEAMEI+NEL YN+K +IDIFN +IDGLCKAGKLETAWE F+K+S+EG L NVVTY
Sbjct: 481 NDCLLEAMEIFNELSYNLKLDIDIFNCLIDGLCKAGKLETAWEFFDKISREGFLPNVVTY 540

Query: 638 NIMIHGCFKERQKEKANDLFEKMEANGCTPNLVTYNILLRGFYESDKPEEVVKLLHRMAK 697
           +I+IHGC KE Q EKANDLF KME NGCTPN++TYN LLRGFY+S+K EEVV+LLHRM  
Sbjct: 541 SILIHGCCKEGQVEKANDLFRKMEENGCTPNVITYNTLLRGFYKSNKREEVVELLHRMVN 600

Query: 698 KNVLPDASTCTLVLEMLSKDEKYRSYVDLLPKFPVEECRG 721
           KNV+PDASTCT+VL+MLS+DEKYR  ++LLP FPV++ RG
Sbjct: 601 KNVVPDASTCTIVLDMLSEDEKYRGCLNLLPTFPVQDYRG 640

[Close]

BLAST of Sed0021875 vs. ExPASy TrEMBL
Match: A0A6J1DSW3 (pentatricopeptide repeat-containing protein At1g63330-like OS=Momordica charantia OX=3673 GN=LOC111022854 PE=4 SV=1)

HSP 1 Score: 924.5 bits (2388), Expect = 2.8e-265
Identity = 461/644 (71.58%), Postives = 538/644 (83.54%), Query Frame = 0


Query: 98  MASKTAASAIS--SSFSPTPSTLKLSSLFSQSPKISSLNP--------KNP-----SPNP 157
           M SK+ ASA S  +  S  P+  KLSSLF+QSP+I S NP        K P      P P
Sbjct: 1   MVSKSVASASSVVAVSSSAPAKGKLSSLFTQSPRIRSSNPQVSPGSSSKRPPLLSRPPKP 60

Query: 158 TKSTA-SPEESTTGDSLL---QTFLQNCKAGNISASEALHFFDQMLSLKPAPDMSSFNLV 217
           T S   SPEE TTG S     +TFLQNCK GN++A+EAL FFD ML  KP P MSSFNL+
Sbjct: 61  TVSPEDSPEELTTGISFQDRHRTFLQNCKTGNVTAAEALQFFDLMLRTKPTPAMSSFNLL 120

Query: 218 LGGLAKTKHYSEVFLLYNRMKLAGFFPNYIMLNILLNCLCHTNRVSEGLAAMAGILRRGY 277
           LGGLAK KHYSEV  LY+RM LAG  PNYI LNILLNCLC+ NRVSEGLAAMAGI+RRGY
Sbjct: 121 LGGLAKIKHYSEVLSLYDRMSLAGILPNYITLNILLNCLCNVNRVSEGLAAMAGIIRRGY 180

Query: 278 VPNIVTYTSLIKGLCMEGKISQATHIFMRMQKLGCRPNVVTYGTLIKGLCQTGNTNIALK 337
           +PNIVTYTSLIKGLCME +IS+AT +FMRMQKLGC PNV+TYGTLIKGLCQTGNTNIALK
Sbjct: 181 IPNIVTYTSLIKGLCMEHRISEATRLFMRMQKLGCTPNVITYGTLIKGLCQTGNTNIALK 240

Query: 338 LHGELIDGSGRYGISCKPNVICYSIIIDSLCKEGREDRAGELFEEMKARGLVPDVIAYSS 397
           LH E+++G+GRYGI+CKPNVICYS IID LCK+G ED+A ELFEEMKA+G++PDVI+YSS
Sbjct: 241 LHEEMLNGTGRYGITCKPNVICYSTIIDGLCKDGLEDKARELFEEMKAQGMLPDVISYSS 300

Query: 398 LIHGFGFGGKLDEAKRLFNEMMDQGIRPNVVTFNVFLGILCKAGKVIEANELFEIMIKRG 457
           LIHGF +GGK +EAK LFNEM+D G++PNVVTFNV + +LCKAGKVIEA EL E+M++ G
Sbjct: 301 LIHGFCYGGKWEEAKSLFNEMVDHGVQPNVVTFNVLMDMLCKAGKVIEAKELLELMVQGG 360

Query: 458 -IVPDLFTYNTLIDGFCLVGDLNGAKELFVSMASNGCEPDVISYNVLINGYCKNWKVEEA 517
              PDLFTYNTL+DGFCLVGDLN A+ELF++M + GCEP+VISYNVLINGYCKNWK+EEA
Sbjct: 361 NNAPDLFTYNTLMDGFCLVGDLNSARELFINMPNKGCEPNVISYNVLINGYCKNWKMEEA 420

Query: 518 MNIYNEMLQVGIKPSVITYNSLLTGLFQAGKVADARKIFGVIQDHGQLPSSCTFNIFLDG 577
           M +YNEMLQVGI+PSVITYNSLLTGLFQAG V DA+K+FGVIQ +G  PSS T++ FLDG
Sbjct: 421 MKLYNEMLQVGIRPSVITYNSLLTGLFQAGMVVDAKKLFGVIQANGLAPSSSTYSTFLDG 480

Query: 578 LCKNGCLLEAMEIYNEL-PYNMKSNIDIFNSIIDGLCKAGKLETAWEIFEKLSQEGLLSN 637
           LCKN CLLEA+E++N L PYN+K NI+IFN +IDGLCKAGKLETAWE+F+K S EGLL N
Sbjct: 481 LCKNDCLLEAIELFNGLKPYNLKLNIEIFNCLIDGLCKAGKLETAWELFDKFSLEGLLPN 540

Query: 638 VVTYNIMIHGCFKERQKEKANDLFEKMEANGCTPNLVTYNILLRGFYESDKPEEVVKLLH 697
           VVTY+IMIHG  K+ Q EKA DLF KME NGCTPN++TYN L+RGFYE++KPEEVV+LLH
Sbjct: 541 VVTYSIMIHGLCKDGQLEKAIDLFRKMEENGCTPNIITYNTLMRGFYENNKPEEVVELLH 600

Query: 698 RMAKKNVLPDASTCTLVLEMLSKDEKYRSYVDLLPKFPVEECRG 721
           RM KKNVLPDASTCT+VL+MLS+DEKY+  ++LLP+FP +ECRG
Sbjct: 601 RMVKKNVLPDASTCTIVLDMLSEDEKYQECLNLLPRFPAQECRG 644

[Close]

BLAST of Sed0021875 vs. ExPASy TrEMBL
Match: A0A5D3C8J0 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold886G00440 PE=4 SV=1)

HSP 1 Score: 792.0 bits (2044), Expect = 2.1e-225
Identity = 373/565 (66.02%), Postives = 467/565 (82.65%), Query Frame = 0


Query: 157 SLLQTFLQNCKAGNISASEALHFFDQMLSLKPAPDMSSFNLVLGGLAKTKHYSEVFLLYN 216
           S +  FL+NCK GNI+A++A HFFD ML   P P +SSF+ +LGGLAK KHYS +F LYN
Sbjct: 5   SQIPIFLRNCKTGNITATQAFHFFDLMLRSYPIPSISSFDCLLGGLAKIKHYSLLFSLYN 64

Query: 217 RMKLAGFFPNYIMLNILLNCLCHTNRVSEGLAAMAGILRRGYVPNIVTYTSLIKGLCMEG 276
           +M+LAG  P+ I LNIL+NCLC+ NRVSE LA MAG+LRRGY+PN+VTYT+LIKGLCME 
Sbjct: 65  KMRLAGLSPSAITLNILVNCLCNVNRVSEALAGMAGLLRRGYIPNVVTYTTLIKGLCMEH 124

Query: 277 KISQATHIFMRMQKLGCRPNVVTYGTLIKGLCQTGNTNIALKLHGELIDGSGRYGISCKP 336
           +IS+AT +F+RMQKLGC PNVVTYGTL+KGLCQTGN NIALKLH E+++ + +YGI+CKP
Sbjct: 125 RISEATRLFLRMQKLGCTPNVVTYGTLVKGLCQTGNVNIALKLHQEMLNDTSQYGINCKP 184

Query: 337 NVICYSIIIDSLCKEGREDRAGELFEEMKARGLVPDVIAYSSLIHGFGFGGKLDEAKRLF 396
           NV  Y+IIID LCK GRED A ELFEEMKA+G++P+VI+YSSLIHGF    K +E+KRLF
Sbjct: 185 NVFNYNIIIDGLCKVGREDEANELFEEMKAQGMIPNVISYSSLIHGFCCARKWEESKRLF 244

Query: 397 NEMMDQGIRPNVVTFNVFLGILCKAGKVIEANELFEIMIKRGIVPDLFTYNTLIDGFCLV 456
           +EM+DQG++P+ VTF+V +  LCK GKVIEA +LFE+MI+RGIVPDLF Y++L++GFC+V
Sbjct: 245 DEMVDQGVQPDKVTFSVLIDTLCKEGKVIEAKKLFEVMIQRGIVPDLFIYSSLMEGFCMV 304

Query: 457 GDLNGAKELFVSMASNGCEPDVISYNVLINGYCKNWKVEEAMNIYNEMLQVGIKPSVITY 516
           GDLN A+ELFVSM S GCEPDVISY VLINGYCK  KVEEAM +YNEML VG +P+VITY
Sbjct: 305 GDLNSARELFVSMPSKGCEPDVISYTVLINGYCKTLKVEEAMKLYNEMLLVGKRPNVITY 364

Query: 517 NSLLTGLFQAGKVADARKIFGVIQDHGQLPSSCTFNIFLDGLCKNGCLLEAMEIYNEL-P 576
            +LLTGLF AGKV DA+K+F  ++  G   +S  + I LDGLCKNGCL EAM+++ EL  
Sbjct: 365 GALLTGLFLAGKVGDAKKLFSAMKARGISANSHIYGIILDGLCKNGCLFEAMKLFTELKS 424

Query: 577 YNMKSNIDIFNSIIDGLCKAGKLETAWEIFEKLSQEGLLSNVVTYNIMIHGCFKERQKEK 636
           YN K +I+ ++ +IDGLCK GKLETAWE+FEKLSQEGL  NVVTY+IMIHG  +E Q +K
Sbjct: 425 YNFKLDIETYSCLIDGLCKEGKLETAWELFEKLSQEGLQPNVVTYSIMIHGLCREGQVDK 484

Query: 637 ANDLFEKMEANGCTPNLVTYNILLRGFYESDKPEEVVKLLHRMAKKNVLPDASTCTLVLE 696
           AN L +KME NGC PN++TYN L+RGFYES+K +EVV+LLH M KK+VLPDA+TC++V++
Sbjct: 485 ANVLIQKMETNGCNPNIITYNTLMRGFYESNKLDEVVQLLHGMVKKDVLPDATTCSIVVD 544

Query: 697 MLSKDEKYRSYVDLLPKFPVEECRG 721
           ML KDEKY+  +DLLP+F V++ +G
Sbjct: 545 MLCKDEKYQECLDLLPRFSVQKHQG 569

[Close]

BLAST of Sed0021875 vs. ExPASy TrEMBL
Match: A0A1S4DYL6 (pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103492586 PE=4 SV=1)

HSP 1 Score: 791.6 bits (2043), Expect = 2.8e-225
Identity = 373/565 (66.02%), Postives = 467/565 (82.65%), Query Frame = 0


Query: 157 SLLQTFLQNCKAGNISASEALHFFDQMLSLKPAPDMSSFNLVLGGLAKTKHYSEVFLLYN 216
           S +  FL+NCK GNI+A++A HFFD ML   P P +SSF+ +LGGLAK KHYS +F LYN
Sbjct: 5   SQIPIFLRNCKTGNITATQAFHFFDLMLRSYPIPPISSFDCLLGGLAKIKHYSLLFSLYN 64

Query: 217 RMKLAGFFPNYIMLNILLNCLCHTNRVSEGLAAMAGILRRGYVPNIVTYTSLIKGLCMEG 276
           +M+LAG  P+ I LNIL+NCLC+ NRVSE LA MAG+LRRGY+PN+VTYT+LIKGLCME 
Sbjct: 65  KMRLAGLSPSAITLNILVNCLCNVNRVSEALAGMAGLLRRGYIPNVVTYTTLIKGLCMEH 124

Query: 277 KISQATHIFMRMQKLGCRPNVVTYGTLIKGLCQTGNTNIALKLHGELIDGSGRYGISCKP 336
           +IS+AT +F+RMQKLGC PNVVTYGTL+KGLCQTGN NIALKLH E+++ + +YGI+CKP
Sbjct: 125 RISEATRLFLRMQKLGCTPNVVTYGTLVKGLCQTGNVNIALKLHQEMLNDTSQYGINCKP 184

Query: 337 NVICYSIIIDSLCKEGREDRAGELFEEMKARGLVPDVIAYSSLIHGFGFGGKLDEAKRLF 396
           NV  Y+IIID LCK GRED A ELFEEMKA+G++P+VI+YSSLIHGF    K +E+KRLF
Sbjct: 185 NVFNYNIIIDGLCKVGREDEANELFEEMKAQGMIPNVISYSSLIHGFCCARKWEESKRLF 244

Query: 397 NEMMDQGIRPNVVTFNVFLGILCKAGKVIEANELFEIMIKRGIVPDLFTYNTLIDGFCLV 456
           +EM+DQG++P+ VTF+V +  LCK GKVIEA +LFE+MI+RGIVPDLF Y++L++GFC+V
Sbjct: 245 DEMVDQGVQPDKVTFSVLIDTLCKEGKVIEAKKLFEVMIQRGIVPDLFIYSSLMEGFCMV 304

Query: 457 GDLNGAKELFVSMASNGCEPDVISYNVLINGYCKNWKVEEAMNIYNEMLQVGIKPSVITY 516
           GDLN A+ELFVSM S GCEPDVISY VLINGYCK  KVEEAM +YNEML VG +P+VITY
Sbjct: 305 GDLNSARELFVSMPSKGCEPDVISYTVLINGYCKTLKVEEAMKLYNEMLLVGKRPNVITY 364

Query: 517 NSLLTGLFQAGKVADARKIFGVIQDHGQLPSSCTFNIFLDGLCKNGCLLEAMEIYNEL-P 576
            +LLTGLF AGKV DA+K+F  ++  G   +S  + I LDGLCKNGCL EAM+++ EL  
Sbjct: 365 GALLTGLFLAGKVGDAKKLFSAMKARGISANSHIYGIILDGLCKNGCLFEAMKLFTELKS 424

Query: 577 YNMKSNIDIFNSIIDGLCKAGKLETAWEIFEKLSQEGLLSNVVTYNIMIHGCFKERQKEK 636
           YN K +I+ ++ +IDGLCK GKLETAWE+FEKLSQEGL  NVVTY+IMIHG  +E Q +K
Sbjct: 425 YNFKLDIETYSCLIDGLCKEGKLETAWELFEKLSQEGLQPNVVTYSIMIHGLCREGQVDK 484

Query: 637 ANDLFEKMEANGCTPNLVTYNILLRGFYESDKPEEVVKLLHRMAKKNVLPDASTCTLVLE 696
           AN L +KME NGC PN++TYN L+RGFYES+K +EVV+LLH M KK+VLPDA+TC++V++
Sbjct: 485 ANVLIQKMETNGCNPNIITYNTLMRGFYESNKLDEVVQLLHGMVKKDVLPDATTCSIVVD 544

Query: 697 MLSKDEKYRSYVDLLPKFPVEECRG 721
           ML KDEKY+  +DLLP+F V++ +G
Sbjct: 545 MLCKDEKYQECLDLLPRFSVQKHQG 569

[Close]

BLAST of Sed0021875 vs. TAIR 10
Match: AT3G22470.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 409.1 bits (1050), Expect = 7.5e-114
Identity = 212/571 (37.13%), Postives = 331/571 (57.97%), Query Frame = 0


Query: 170 NISASEALHFFDQMLSLKPAPDMSSFNLVLGGLAKTKHYSEVFLLYNRMKLAGFFPNYIM 229
           +I  ++A+  F+ M+  +P P    FN +   +A+TK Y  V      M+L G   +   
Sbjct: 48  DIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYT 107

Query: 230 LNILLNCLCHTNRVSEGLAAMAGILRRGYVPNIVTYTSLIKGLCMEGKISQATHIFMRMQ 289
           + I++NC C   ++    + +    + GY P+ +T+++L+ G C+EG++S+A  +  RM 
Sbjct: 108 MTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMV 167

Query: 290 KLGCRPNVVTYGTLIKGLCQTGNTNIALKLHGELID------------------GSGRYG 349
           ++  RP++VT  TLI GLC  G  + AL L   +++                   SG   
Sbjct: 168 EMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSA 227

Query: 350 I-----------SCKPNVICYSIIIDSLCKEGREDRAGELFEEMKARGLVPDVIAYSSLI 409
           +           + K +V+ YSI+IDSLCK+G  D A  LF EM+ +G+  DV+ YSSLI
Sbjct: 228 LALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLI 287

Query: 410 HGFGFGGKLDEAKRLFNEMMDQGIRPNVVTFNVFLGILCKAGKVIEANELFEIMIKRGIV 469
            G    GK D+  ++  EM+ + I P+VVTF+  + +  K GK++EA EL+  MI RGI 
Sbjct: 288 GGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIA 347

Query: 470 PDLFTYNTLIDGFCLVGDLNGAKELFVSMASNGCEPDVISYNVLINGYCKNWKVEEAMNI 529
           PD  TYN+LIDGFC    L+ A ++F  M S GCEPD+++Y++LIN YCK  +V++ M +
Sbjct: 348 PDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRL 407

Query: 530 YNEMLQVGIKPSVITYNSLLTGLFQAGKVADARKIFGVIQDHGQLPSSCTFNIFLDGLCK 589
           + E+   G+ P+ ITYN+L+ G  Q+GK+  A+++F  +   G  PS  T+ I LDGLC 
Sbjct: 408 FREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCD 467

Query: 590 NGCLLEAMEIYNELPYN-MKSNIDIFNSIIDGLCKAGKLETAWEIFEKLSQEGLLSNVVT 649
           NG L +A+EI+ ++  + M   I I+N II G+C A K++ AW +F  LS +G+  +VVT
Sbjct: 468 NGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVT 527

Query: 650 YNIMIHGCFKERQKEKANDLFEKMEANGCTPNLVTYNILLRGFYESDKPEEVVKLLHRMA 709
           YN+MI G  K+    +A+ LF KM+ +GCTP+  TYNIL+R           V+L+  M 
Sbjct: 528 YNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMK 587

Query: 710 KKNVLPDASTCTLVLEMLSKDEKYRSYVDLL 711
                 D+ST  +V++MLS     +S++D+L
Sbjct: 588 VCGFSADSSTIKMVIDMLSDRRLDKSFLDML 618

[Close]

BLAST of Sed0021875 vs. TAIR 10
Match: AT1G12700.1 (ATP binding;nucleic acid binding;helicases )

HSP 1 Score: 397.9 bits (1021), Expect = 1.7e-110
Identity = 198/539 (36.73%), Postives = 321/539 (59.55%), Query Frame = 0


Query: 162 FLQNCKAG--NISASEALHFFDQMLSLKPAPDMSSFNLVLGGLAKTKHYSEVFLLYNRMK 221
           F +  ++G  +I   +A+  F +M+  +P P +  F+     +A+TK ++ V     +++
Sbjct: 56  FRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLE 115

Query: 222 LAGFFPNYIMLNILLNCLCHTNRVSEGLAAMAGILRRGYVPNIVTYTSLIKGLCMEGKIS 281
           L G   N   LNI++NC C   +     + +  +++ GY P+  T+ +LIKGL +EGK+S
Sbjct: 116 LNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVS 175

Query: 282 QATHIFMRMQKLGCRPNVVTYGTLIKGLCQTGNTNIALKLHGELIDGSGRYGISCKPNVI 341
           +A  +  RM + GC+P+VVTY +++ G+C++G+T++AL L  ++ +       + K +V 
Sbjct: 176 EAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEER------NVKADVF 235

Query: 342 CYSIIIDSLCKEGREDRAGELFEEMKARGLVPDVIAYSSLIHGFGFGGKLDEAKRLFNEM 401
            YS IIDSLC++G  D A  LF+EM+ +G+   V+ Y+SL+ G    GK ++   L  +M
Sbjct: 236 TYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDM 295

Query: 402 MDQGIRPNVVTFNVFLGILCKAGKVIEANELFEIMIKRGIVPDLFTYNTLIDGFCLVGDL 461
           + + I PNV+TFNV L +  K GK+ EANEL++ MI RGI P++ TYNTL+DG+C+   L
Sbjct: 296 VSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRL 355

Query: 462 NGAKELFVSMASNGCEPDVISYNVLINGYCKNWKVEEAMNIYNEMLQVGIKPSVITYNSL 521
           + A  +   M  N C PD++++  LI GYC   +V++ M ++  + + G+  + +TY+ L
Sbjct: 356 SEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSIL 415

Query: 522 LTGLFQAGKVADARKIFGVIQDHGQLPSSCTFNIFLDGLCKNGCLLEAMEIYNELPYN-M 581
           + G  Q+GK+  A ++F  +  HG LP   T+ I LDGLC NG L +A+EI+ +L  + M
Sbjct: 416 VQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 475

Query: 582 KSNIDIFNSIIDGLCKAGKLETAWEIFEKLSQEGLLSNVVTYNIMIHGCFKERQKEKAND 641
              I ++ +II+G+CK GK+E AW +F  L  +G+  NV+TY +MI G  K+    +AN 
Sbjct: 476 DLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANI 535

Query: 642 LFEKMEANGCTPNLVTYNILLRGFYESDKPEEVVKLLHRMAKKNVLPDASTCTLVLEML 698
           L  KME +G  PN  TYN L+R            KL+  M       DAS+  +V++ML
Sbjct: 536 LLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588

[Close]

BLAST of Sed0021875 vs. TAIR 10
Match: AT1G12300.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 396.0 bits (1016), Expect = 6.6e-110
Identity = 211/577 (36.57%), Postives = 328/577 (56.85%), Query Frame = 0


Query: 170 NISASEALHFFDQMLSLKPAPDMSSFNLVLGGLAKTKHYSEVFLLYNRMKLAGFFPNYIM 229
           +I A +A+  F  M+  +P P +  F+ +   +AKTK Y  V  L  +M+L G   N   
Sbjct: 66  DIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYT 125

Query: 230 LNILLNCLCHTNRVSEGLAAMAGILRRGYVPNIVTYTSLIKGLCMEGKISQATHIFMRMQ 289
           L+I++NC C   ++    +AM  I++ GY PN +T+++LI GLC+EG++S+A  +  RM 
Sbjct: 126 LSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMV 185

Query: 290 KLGCRPNVVTYGTLIKGLCQTGNTNIALKLHGELIDGSGRYGISCKP---------NVIC 349
           ++G +P+++T  TL+ GLC +G    A+     LID    YG  C+P         NV+C
Sbjct: 186 EMGHKPDLITINTLVNGLCLSGKEAEAML----LIDKMVEYG--CQPNAVTYGPVLNVMC 245

Query: 350 --------------------------YSIIIDSLCKEGREDRAGELFEEMKARGLVPDVI 409
                                     YSIIID LCK G  D A  LF EM+ +G+  ++I
Sbjct: 246 KSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNII 305

Query: 410 AYSSLIHGFGFGGKLDEAKRLFNEMMDQGIRPNVVTFNVFLGILCKAGKVIEANELFEIM 469
            Y+ LI GF   G+ D+  +L  +M+ + I PNVVTF+V +    K GK+ EA EL + M
Sbjct: 306 TYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEM 365

Query: 470 IKRGIVPDLFTYNTLIDGFCLVGDLNGAKELFVSMASNGCEPDVISYNVLINGYCKNWKV 529
           I RGI PD  TY +LIDGFC    L+ A ++   M S GC+P++ ++N+LINGYCK  ++
Sbjct: 366 IHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRI 425

Query: 530 EEAMNIYNEMLQVGIKPSVITYNSLLTGLFQAGKVADARKIFGVIQDHGQLPSSCTFNIF 589
           ++ + ++ +M   G+    +TYN+L+ G  + GK+  A+++F  +      P+  T+ I 
Sbjct: 426 DDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKIL 485

Query: 590 LDGLCKNGCLLEAMEIYNELPYN-MKSNIDIFNSIIDGLCKAGKLETAWEIFEKLSQEGL 649
           LDGLC NG   +A+EI+ ++  + M+ +I I+N II G+C A K++ AW++F  L  +G+
Sbjct: 486 LDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGV 545

Query: 650 LSNVVTYNIMIHGCFKERQKEKANDLFEKMEANGCTPNLVTYNILLRGFYESDKPEEVVK 709
              V TYNIMI G  K+    +A  LF KME +G  P+  TYNIL+R         + VK
Sbjct: 546 KPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVK 605

Query: 710 LLHRMAKKNVLPDASTCTLVLEMLSKDEKYRSYVDLL 711
           L+  + +     DAST  +V++MLS     +S++D+L
Sbjct: 606 LIEELKRCGFSVDASTIKMVIDMLSDGRLKKSFLDML 636

[Close]

BLAST of Sed0021875 vs. TAIR 10
Match: AT1G62590.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 392.9 bits (1008), Expect = 5.6e-109
Identity = 197/531 (37.10%), Postives = 321/531 (60.45%), Query Frame = 0


Query: 181 DQMLSLKPAPDMSSFNLVLGGLAKTKHYSEVFLLYNRMKLAGFFPNYIMLNILLNCLCHT 240
           ++M  L+    + ++N+++    +    S    L  +M   G+ P+ + L+ LLN  CH 
Sbjct: 109 EKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHG 168

Query: 241 NRVSEGLAAMAGILRRGYVPNIVTYTSLIKGLCMEGKISQATHIFMRMQKLGCRPNVVTY 300
            R+S+ +A +  ++  GY P+ +T+T+LI GL +  K S+A  +  RM + GC+PN+VTY
Sbjct: 169 KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 228

Query: 301 GTLIKGLCQTGNTNIALKLHGELIDGSGRYGISCKPNVICYSIIIDSLCKEGREDRAGEL 360
           G ++ GLC+ G+T++AL L  ++           + +V+ ++ IIDSLCK    D A  L
Sbjct: 229 GVVVNGLCKRGDTDLALNLLNKM------EAAKIEADVVIFNTIIDSLCKYRHVDDALNL 288

Query: 361 FEEMKARGLVPDVIAYSSLIHGFGFGGKLDEAKRLFNEMMDQGIRPNVVTFNVFLGILCK 420
           F+EM+ +G+ P+V+ YSSLI      G+  +A +L ++M+++ I PN+VTFN  +    K
Sbjct: 289 FKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVK 348

Query: 421 AGKVIEANELFEIMIKRGIVPDLFTYNTLIDGFCLVGDLNGAKELFVSMASNGCEPDVIS 480
            GK +EA +L++ MIKR I PD+FTYN+L++GFC+   L+ AK++F  M S  C PDV++
Sbjct: 349 EGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVT 408

Query: 481 YNVLINGYCKNWKVEEAMNIYNEMLQVGIKPSVITYNSLLTGLFQAGKVADARKIFGVIQ 540
           YN LI G+CK+ +VE+   ++ EM   G+    +TY +L+ GLF  G   +A+K+F  + 
Sbjct: 409 YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 468

Query: 541 DHGQLPSSCTFNIFLDGLCKNGCLLEAMEIYNELPYN-MKSNIDIFNSIIDGLCKAGKLE 600
             G  P   T++I LDGLC NG L +A+E+++ +  + +K +I I+ ++I+G+CKAGK++
Sbjct: 469 SDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVD 528

Query: 601 TAWEIFEKLSQEGLLSNVVTYNIMIHGCFKERQKEKANDLFEKMEANGCTPNLVTYNILL 660
             W++F  LS +G+  NVVTYN MI G   +R  ++A  L +KM+ +G  PN  TYN L+
Sbjct: 529 DGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLI 588

Query: 661 RGFYESDKPEEVVKLLHRMAKKNVLPDASTCTLVLEMLSKDEKYRSYVDLL 711
           R            +L+  M     + DAST  LV  ML      +S++D+L
Sbjct: 589 RAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGRLDKSFLDML 633

[Close]

BLAST of Sed0021875 vs. TAIR 10
Match: AT1G62910.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 391.3 bits (1004), Expect = 1.6e-108
Identity = 203/531 (38.23%), Postives = 320/531 (60.26%), Query Frame = 0


Query: 181 DQMLSLKPAPDMSSFNLVLGGLAKTKHYSEVFLLYNRMKLAGFFPNYIMLNILLNCLCHT 240
           +QM +L  + D+ ++++ +    +    S    +  +M   G+ P+ + L+ LLN  CH+
Sbjct: 107 EQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHS 166

Query: 241 NRVSEGLAAMAGILRRGYVPNIVTYTSLIKGLCMEGKISQATHIFMRMQKLGCRPNVVTY 300
            R+S+ +A +  ++  GY P+  T+T+LI GL +  K S+A  +  +M + GC+P++VTY
Sbjct: 167 KRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTY 226

Query: 301 GTLIKGLCQTGNTNIALKLHGELIDGSGRYGISCKPNVICYSIIIDSLCKEGREDRAGEL 360
           GT++ GLC+ G+ ++AL L  ++  G        + +V+ Y+ IID LCK    D A  L
Sbjct: 227 GTVVNGLCKRGDIDLALSLLKKMEKG------KIEADVVIYNTIIDGLCKYKHMDDALNL 286

Query: 361 FEEMKARGLVPDVIAYSSLIHGFGFGGKLDEAKRLFNEMMDQGIRPNVVTFNVFLGILCK 420
           F EM  +G+ PDV  YSSLI      G+  +A RL ++M+++ I PNVVTF+  +    K
Sbjct: 287 FTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK 346

Query: 421 AGKVIEANELFEIMIKRGIVPDLFTYNTLIDGFCLVGDLNGAKELFVSMASNGCEPDVIS 480
            GK++EA +L++ MIKR I PD+FTY++LI+GFC+   L+ AK +F  M S  C P+V++
Sbjct: 347 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 406

Query: 481 YNVLINGYCKNWKVEEAMNIYNEMLQVGIKPSVITYNSLLTGLFQAGKVADARKIFGVIQ 540
           Y+ LI G+CK  +VEE M ++ EM Q G+  + +TY +L+ G FQA    +A+ +F  + 
Sbjct: 407 YSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 466

Query: 541 DHGQLPSSCTFNIFLDGLCKNGCLLEAMEIYNELPYN-MKSNIDIFNSIIDGLCKAGKLE 600
             G  P+  T+NI LDGLCKNG L +AM ++  L  + M+ +I  +N +I+G+CKAGK+E
Sbjct: 467 SVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVE 526

Query: 601 TAWEIFEKLSQEGLLSNVVTYNIMIHGCFKERQKEKANDLFEKMEANGCTPNLVTYNILL 660
             WE+F  LS +G+  NV+ YN MI G  ++  KE+A+ L +KM+ +G  PN  TYN L+
Sbjct: 527 DGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLI 586

Query: 661 RGFYESDKPEEVVKLLHRMAKKNVLPDASTCTLVLEMLSKDEKYRSYVDLL 711
           R        E   +L+  M       DAST  LV  ML      +S++D+L
Sbjct: 587 RARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSFLDML 631

The following BLAST results are available for this feature:

BLAST of Sed0021875 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7014482.1	6.1e-275	74.53	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]
XP_022953742.1	6.1e-275	74.53	putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial [C...	[more]
KAG6575949.1	4.0e-274	74.49	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]
XP_023548637.1	9.7e-273	74.22	pentatricopeptide repeat-containing protein At1g63330-like [Cucurbita pepo subsp...	[more]
XP_022992036.1	6.3e-272	73.75	pentatricopeptide repeat-containing protein At1g63330-like [Cucurbita maxima]	[more]

BLAST of Sed0021875 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NQ83	1.1e-112	37.13	Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidop...	[more]
P0C7Q7	1.2e-111	36.59	Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial OS...	[more]
Q0WKV3	9.3e-109	36.57	Pentatricopeptide repeat-containing protein At1g12300, mitochondrial OS=Arabidop...	[more]
Q9SXD8	7.9e-108	37.10	Pentatricopeptide repeat-containing protein At1g62590 OS=Arabidopsis thaliana OX...	[more]
Q9LQ16	2.3e-107	38.23	Pentatricopeptide repeat-containing protein At1g62910 OS=Arabidopsis thaliana OX...	[more]

BLAST of Sed0021875 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GP31	3.0e-275	74.53	putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial OS...	[more]
A0A6J1JSG4	3.1e-272	73.75	pentatricopeptide repeat-containing protein At1g63330-like OS=Cucurbita maxima O...	[more]
A0A6J1DSW3	2.8e-265	71.58	pentatricopeptide repeat-containing protein At1g63330-like OS=Momordica charanti...	[more]
A0A5D3C8J0	2.1e-225	66.02	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S4DYL6	2.8e-225	66.02	pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like OS=Cuc...	[more]

BLAST of Sed0021875 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G22470.1	7.5e-114	37.13	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G12700.1	1.7e-110	36.73	ATP binding;nucleic acid binding;helicases	[more]
AT1G12300.1	6.6e-110	36.57	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G62590.1	5.6e-109	37.10	pentatricopeptide (PPR) repeat-containing protein	[more]
AT1G62910.1	1.6e-108	38.23	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 194..223 e-value: 0.018 score: 15.3
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 618..651 e-value: 2.7E-10 score: 37.8 coord: 263..297 e-value: 1.5E-8 score: 32.3 coord: 194..226 e-value: 1.3E-4 score: 19.9 coord: 298..324 e-value: 0.0032 score: 15.5 coord: 444..478 e-value: 7.2E-10 score: 36.4 coord: 339..373 e-value: 1.4E-9 score: 35.5 coord: 409..442 e-value: 3.9E-7 score: 27.8 coord: 653..687 e-value: 5.2E-6 score: 24.3 coord: 584..615 e-value: 4.0E-7 score: 27.8 coord: 514..547 e-value: 1.7E-4 score: 19.6 coord: 229..262 e-value: 4.7E-4 score: 18.2 coord: 479..513 e-value: 6.8E-9 score: 33.4 coord: 375..408 e-value: 5.1E-8 score: 30.6 coord: 549..574 e-value: 3.4E-5 score: 21.7
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 336..383 e-value: 5.8E-13 score: 48.8 coord: 616..662 e-value: 1.1E-17 score: 64.0 coord: 260..309 e-value: 2.8E-18 score: 65.9 coord: 406..454 e-value: 1.6E-16 score: 60.3 coord: 476..524 e-value: 6.2E-18 score: 64.7
IPR002885	Pentatricopeptide repeat	PFAM	PF12854	PPR_1	coord: 543..573 e-value: 4.5E-6 score: 26.3 coord: 578..607 e-value: 9.2E-8 score: 31.7
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 372..406 score: 13.219385
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 581..615 score: 11.761533
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 191..225 score: 9.843305
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 477..511 score: 14.030521
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 651..685 score: 11.509422
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 261..295 score: 12.912469
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 407..441 score: 12.441133
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 512..546 score: 10.577712
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 442..476 score: 12.945353
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 616..650 score: 13.186502
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 337..371 score: 13.000159
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 226..260 score: 8.516988
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 296..326 score: 8.95544
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 249..324 e-value: 9.6E-22 score: 79.4 coord: 325..400 e-value: 9.3E-22 score: 79.5 coord: 401..471 e-value: 4.7E-22 score: 80.4
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 576..717 e-value: 1.1E-34 score: 122.2
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 154..248 e-value: 4.2E-14 score: 54.3 coord: 472..565 e-value: 4.6E-30 score: 106.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 129..154
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..61
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 45..59
None	No IPR available	PANTHER	PTHR47941	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 3, MITOCHONDRIAL	coord: 334..574 coord: 457..707 coord: 166..396
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 377..553

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0021875.1	Sed0021875.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0050794	regulation of cellular process
molecular_function	GO:0005515	protein binding