Sed0021870 (gene) Chayote v1

Overview
NameSed0021870
Typegene
OrganismSechium edule (Chayote v1)
Descriptiontranscription termination factor MTERF9, chloroplastic
LocationLG04: 45717669 .. 45721961 (+)
RNA-Seq ExpressionSed0021870
SyntenySed0021870
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGCGCGCCACCACTTTACCTTCCAAACGACGCCGTATCTTCAGAGGAAAAAAAGAAATAGAAAATGAATTAATTCCCTAAAATCTTAGGGTTCTTGGGTATATTCTCTTTTTTTTTTTTCTCTCTTATCTATATTGAAATTATGGCTTTCCTCAATCTGTTCTCCTTCTCTCCCACATTTCACCTTGATGATTTCCCCACTTCTTCGGATTTCTTCAGCGCTCCCAGTTTGGCGTGTAGCTTTCATGGCGGCGGGGTTTGTTGTCGGAGGAGGAAGAGGACCGTGCGGCGGCTTGTGGTCCGGTCGACCCACTCCAATGCCAGGATTCTCAAGCCCAAACGGAGGTCGAGGTTCGGTCAGACTTTGTCGCCGTTTGATAGCGATGAGGACGAGGAGAGTGTGGATGATTTTAGTAGTGATGAGGATGAGGATGATGACGACGATGTGAGTTCTTGTACTCTCTTCTCGTTGGAGTGGTAATTCTGATTTCTGTCTTCTGAATGTTTCATGTTTATGTGTCTTCTGTATGCGGGTTTAAGTTTAAAAAAATAAATAAATTATTATTATAGAAATTGGGTGAAGTTGATTTTGTTTATTTTTCACTGATTGGGGAATGTTCTTAGGTTTCAGTATGGCTGGATTGATTGGGTTTCAGTGTGGTTGGATTGATTGTTCTCGTGAAATGTAACTACATGGACTGGCCCGTGGTCAATAAGGACCAATTTGAACTGCAAAGGTCTTAGAAGAATGTATTAGGCATGGTGGGCTATCTCACACTGGCTATCTAGTTCTTGATATCTATTGTTGTCATGAGAATATTTTTTTTTTTAGGAAACAGAAAACTTCATTAAAATCCTATTGAGACAATAAAGAAGGGAAGAGTATTCCTTGAAGGTGCGGGTTTGATTTTCATTGATTGGGGAATGTCCTGAGGGTTTCATCTTGGTTGGATTGATTGGGGAGTGTTGTTGGGTTTCAGTGTGGTTGGTTTTGTTTACTTTTCACTGGTTGGACTGAGACTGGTAGGTAGTCAATAAGGACCAATTTGAATAGTAAAGGTATTAAAAGGAATGAATGATTAAAGACATGGTGGGCTCTGTGACACCGCCTACCTATATTTTAACTTCTTGGGAAAAGGTTTTCCTGAGAATAGTCAAAGTAGATACAAGATGGTCTTGACACTTGAAATATGGAGTGGCTCAATTGGTCAATGAGGGCCTTGGGGTGCTTAAGGCGATGGGCTCAATCAATGGTGGCCACCTACCTAGGAATTAATTTCCTACGAGTTTACTTGACATCCAATTGTTGTAGGGTCATGCGGTATGTTCCCTGGCATTAGTCGAGATACATACAAGCTGGCTCGGACAGTCACAAATATAAAAAAAAGAAAAAGAAATGAGGAATTATGATATGTATGTGTATATATATATGTGCATGTGTGTATATATGAAAAGGATGCAGTACTAAATAACAATGACATAGTTCTGGGCATGAACAACTAATTGAGTTTCATGGATTTTAATAACCGGTTTTGATCGGGTATTGGAAAAGAATGCACTTGAAAATTAATTTTTCATGCTATTATTATCATTTCTGTTGGCCTCATGGAAAGTTGATTTGTTCGCAATTTTGTTTATAGTTTTTTATGTATGTGTATAATGGAACATTGAGATCTTACTATCTATGTACATTGTGGGGGTTCTTTCATTTTCCAGGGTGATATCTCGGATGTTGAATATGATGATGCTAAAAGAAAGAGAACCAAGTTGCAGAGCAGAGCCAAAAAGAACCACTCGCAGCGAGGTTATCTTTTGTTTTTATTTACTTTCTCTCTCTCTCAAGGAGCTATTGGGTCAGGACAATTTTCTTGTGCAGAGAACTTGAGACATGCCAGAGAAATCAGGGGAATAAGATCATTCAACGATGAGAAATTTTTTAAAGTTAATGCTAACCTCCATGACTTTCAAGATAACACTAATGATACTGAAAAACAAGACTTCACTTTTGAAGAGGAGGTTCGTACTACCAATATAGGCAGGAAAGGAAAGGTGGATGAATAAGCTTGCAACTTTATTAACCATTTTAGATTGGTAAAATAAATGTTTAACATTCATGCTTTTCCATTGATTTAGTTGATGAGCAAGAAATCTATGGCAGCTAGATTTCCTCGTCTAGCAGAAGAAATGGAATTGGATGAGAAATGGTTTCCTCTACTTGATTATCTTACAACATTTGGGCTCAAGGATTCACATTTTCTCCAAATGTATGAGAGACACATGCCATCTCTTCAAATAAATGTCTGTTCTGCTCAAGAAAGACTAGAATACTTGTTAAGTGTTGGTGTTAAACAGAGGGATGTTAGAAGAATACTCTTAAGGCAGCCCCAAATTCTGCAGTACACAGTAGAGAACAATTTGAAATCCCATGTTGCTTTCTTACTGAGTTTGGGAATCCCAAATTCTAGAGTGGGGCAAATCATTGCTGCTGCTCCGTCTCTATTTTCTTATAGTGTTGAGAATTCATTAAAACCCACAGTTCGATACTTGGTCGAGGAAGTTGGCATCAAGGAAAAGGATTTGGCTAAAGTTGTGCAGCTGAGTCCTCAAATCCTGGTTCAGCGGATTGATGTATCATGGAACGCACGATATATGTTTCTTTCAAAGGAAATAGGAGCTCCTCGTGATAGTGTAGTTAAGATGGTAACAAAACATCCTCAACTCCTTCACTATAGCATTGATGACGGGTTGCTACCTAGGATCAACTTCCTTAGAAGTATTGGAATGCGAAATCCAGAGATCTTGAAAGTCTCAACTAGCCTTACCCAGGTATTTATTTTGCATTTGTTTTCTATTTTTGTCAACATATTGAGAAGATATCCATTTTATGTTAAAGCTTTCATACTCGGGTCGTTTTTTTTCTCCACCTAGGTGTAGTACTAGGTTGAGAACCACTTTACTACTTATACTTTCATCTAAGTGTAATGATTTACATTTTGAACTTTAGTAGGTAATAATTTAGTCCTTGTGAGATTTCTCACTATAGATGGCTAAACTGTTACTATATAACGATTTTGTCTTCAAAACATATTTGATCCTTATTACTTCACTAATCTACATATTTTAGAACTCTTGTTAAATCTAATAACATATTTCACAATAAGGCTTAAATCGTTACAAATTTAATAGTACAAGGGCTAAACTGTTCCATAGTAGTAGGTACGGATCCATACTAAAGTTTTGGGATTAAGTTGTTACAAATTTGAGGGATAAAGGACTAAATTGCTACTATAACTGAAGTATGAGGACCAAAATTTTTCTAATACTTCGATTGAGATGGTTCTAACTCCTTCATTAGTCCTCATTTTCAGTCCTAATCAGGTCTGTTTGTTCTGCAGGTTTTCTCTTTATCTTTGGAGGATAATTTGAAGCCCAAATACATGTATCTGATCAACGAACTTCGTAACGAAGTGAAATCACTGACCAAATACCCTATGTACCTAAGCTTGTCCTTGGATCAGAGAATTCGGCCTCGACATCGGTTCCTAGTTTCTCTTAAGAAAGCACCGAAGGGACCATTCCCTCTAAGTTCCCTTGTTCCAACTGATGAATGCTTTTGTCAGCAGTGGGCTGAAACCAGTCTAGACAAGTATCTAGAATTTCGGAAGCGATTGCTATTGAAGGAGTTTGCACAGAAATACGAAAGGAGATGATAACAGAGTAATCATCATACTACTCTCAATTGCCATGTCTGGCTTTGTACTGGAGAGTTCTTCCATTTTCACTGACATGAAATGAAAGTTCTGAAATAGATGGCCCAAGTTCTCTAATCCTTTATATTTATGCAAATCCCTTTTCAGCAGGTCATCGCAGTTCGGGTCTTTGATGAACAGACGCGATGCTGTCAATTCGTTTATCCAGTGCCGTAATCAACTCACAAACTCTTCCTGCTTTGTCTACCATGTCTACTGCACTTGCTCATCCAAAAGGAGCAGGTCAGCTTGTCACAAGCATATCACTGTAAGATCTCTTTTGAAACATAGTATATAAAATCCTTGTAAATATTTCCAAGGATTGGGGGAGGGGGGTTGTAGTATAATGAGTGTATAGAATTCAGATGTTTCGGTCTTTCTATGCCCTGAAAGTTGTAATTGACACAAATTTTGGTCTGTATCCTCTCTTGTCTACTAAGGGCTCGTTTGATAAGGTTCCTGTTTCTTATTTTTTAGAAACAAGTTTGTTTGATAATTGTTCTCGTTTCTTGTTTCTCAAATAAAAGAGAAATGTTTCTCAAAAA

mRNA sequence

TGCGCGCCACCACTTTACCTTCCAAACGACGCCGTATCTTCAGAGGAAAAAAAGAAATAGAAAATGAATTAATTCCCTAAAATCTTAGGGTTCTTGGGTATATTCTCTTTTTTTTTTTTCTCTCTTATCTATATTGAAATTATGGCTTTCCTCAATCTGTTCTCCTTCTCTCCCACATTTCACCTTGATGATTTCCCCACTTCTTCGGATTTCTTCAGCGCTCCCAGTTTGGCGTGTAGCTTTCATGGCGGCGGGGTTTGTTGTCGGAGGAGGAAGAGGACCGTGCGGCGGCTTGTGGTCCGGTCGACCCACTCCAATGCCAGGATTCTCAAGCCCAAACGGAGGTCGAGGTTCGGTCAGACTTTGTCGCCGTTTGATAGCGATGAGGACGAGGAGAGTGTGGATGATTTTAGTAGTGATGAGGATGAGGATGATGACGACGATGGTGATATCTCGGATGTTGAATATGATGATGCTAAAAGAAAGAGAACCAAGTTGCAGAGCAGAGCCAAAAAGAACCACTCGCAGCGAGAGAACTTGAGACATGCCAGAGAAATCAGGGGAATAAGATCATTCAACGATGAGAAATTTTTTAAAGTTAATGCTAACCTCCATGACTTTCAAGATAACACTAATGATACTGAAAAACAAGACTTCACTTTTGAAGAGGAGGTTCGTACTACCAATATAGGCAGGAAAGGAAAGTTGATGAGCAAGAAATCTATGGCAGCTAGATTTCCTCGTCTAGCAGAAGAAATGGAATTGGATGAGAAATGGTTTCCTCTACTTGATTATCTTACAACATTTGGGCTCAAGGATTCACATTTTCTCCAAATGTATGAGAGACACATGCCATCTCTTCAAATAAATGTCTGTTCTGCTCAAGAAAGACTAGAATACTTGTTAAGTGTTGGTGTTAAACAGAGGGATGTTAGAAGAATACTCTTAAGGCAGCCCCAAATTCTGCAGTACACAGTAGAGAACAATTTGAAATCCCATGTTGCTTTCTTACTGAGTTTGGGAATCCCAAATTCTAGAGTGGGGCAAATCATTGCTGCTGCTCCGTCTCTATTTTCTTATAGTGTTGAGAATTCATTAAAACCCACAGTTCGATACTTGGTCGAGGAAGTTGGCATCAAGGAAAAGGATTTGGCTAAAGTTGTGCAGCTGAGTCCTCAAATCCTGGTTCAGCGGATTGATGTATCATGGAACGCACGATATATGTTTCTTTCAAAGGAAATAGGAGCTCCTCGTGATAGTGTAGTTAAGATGGTAACAAAACATCCTCAACTCCTTCACTATAGCATTGATGACGGGTTGCTACCTAGGATCAACTTCCTTAGAAGTATTGGAATGCGAAATCCAGAGATCTTGAAAGTCTCAACTAGCCTTACCCAGGTTTTCTCTTTATCTTTGGAGGATAATTTGAAGCCCAAATACATGTATCTGATCAACGAACTTCGTAACGAAGTGAAATCACTGACCAAATACCCTATGTACCTAAGCTTGTCCTTGGATCAGAGAATTCGGCCTCGACATCGGTTCCTAGTTTCTCTTAAGAAAGCACCGAAGGGACCATTCCCTCTAAGTTCCCTTGTTCCAACTGATGAATGCTTTTGTCAGCAGTGGGCTGAAACCAGTCTAGACAAGTATCTAGAATTTCGGAAGCGATTGCTATTGAAGGAGTTTGCACAGAAATACGAAAGGAGATGATAACAGAGTAATCATCATACTACTCTCAATTGCCATGTCTGGCTTTGTACTGGAGAGTTCTTCCATTTTCACTGACATGAAATGAAAGTTCTGAAATAGATGGCCCAAGTTCTCTAATCCTTTATATTTATGCAAATCCCTTTTCAGCAGGTCATCGCAGTTCGGGTCTTTGATGAACAGACGCGATGCTGTCAATTCGTTTATCCAGTGCCGTAATCAACTCACAAACTCTTCCTGCTTTGTCTACCATGTCTACTGCACTTGCTCATCCAAAAGGAGCAGGTCAGCTTGTCACAAGCATATCACTGTAAGATCTCTTTTGAAACATAGTATATAAAATCCTTGTAAATATTTCCAAGGATTGGGGGAGGGGGGTTGTAGTATAATGAGTGTATAGAATTCAGATGTTTCGGTCTTTCTATGCCCTGAAAGTTGTAATTGACACAAATTTTGGTCTGTATCCTCTCTTGTCTACTAAGGGCTCGTTTGATAAGGTTCCTGTTTCTTATTTTTTAGAAACAAGTTTGTTTGATAATTGTTCTCGTTTCTTGTTTCTCAAATAAAAGAGAAATGTTTCTCAAAAA

Coding sequence (CDS)

ATGGCTTTCCTCAATCTGTTCTCCTTCTCTCCCACATTTCACCTTGATGATTTCCCCACTTCTTCGGATTTCTTCAGCGCTCCCAGTTTGGCGTGTAGCTTTCATGGCGGCGGGGTTTGTTGTCGGAGGAGGAAGAGGACCGTGCGGCGGCTTGTGGTCCGGTCGACCCACTCCAATGCCAGGATTCTCAAGCCCAAACGGAGGTCGAGGTTCGGTCAGACTTTGTCGCCGTTTGATAGCGATGAGGACGAGGAGAGTGTGGATGATTTTAGTAGTGATGAGGATGAGGATGATGACGACGATGGTGATATCTCGGATGTTGAATATGATGATGCTAAAAGAAAGAGAACCAAGTTGCAGAGCAGAGCCAAAAAGAACCACTCGCAGCGAGAGAACTTGAGACATGCCAGAGAAATCAGGGGAATAAGATCATTCAACGATGAGAAATTTTTTAAAGTTAATGCTAACCTCCATGACTTTCAAGATAACACTAATGATACTGAAAAACAAGACTTCACTTTTGAAGAGGAGGTTCGTACTACCAATATAGGCAGGAAAGGAAAGTTGATGAGCAAGAAATCTATGGCAGCTAGATTTCCTCGTCTAGCAGAAGAAATGGAATTGGATGAGAAATGGTTTCCTCTACTTGATTATCTTACAACATTTGGGCTCAAGGATTCACATTTTCTCCAAATGTATGAGAGACACATGCCATCTCTTCAAATAAATGTCTGTTCTGCTCAAGAAAGACTAGAATACTTGTTAAGTGTTGGTGTTAAACAGAGGGATGTTAGAAGAATACTCTTAAGGCAGCCCCAAATTCTGCAGTACACAGTAGAGAACAATTTGAAATCCCATGTTGCTTTCTTACTGAGTTTGGGAATCCCAAATTCTAGAGTGGGGCAAATCATTGCTGCTGCTCCGTCTCTATTTTCTTATAGTGTTGAGAATTCATTAAAACCCACAGTTCGATACTTGGTCGAGGAAGTTGGCATCAAGGAAAAGGATTTGGCTAAAGTTGTGCAGCTGAGTCCTCAAATCCTGGTTCAGCGGATTGATGTATCATGGAACGCACGATATATGTTTCTTTCAAAGGAAATAGGAGCTCCTCGTGATAGTGTAGTTAAGATGGTAACAAAACATCCTCAACTCCTTCACTATAGCATTGATGACGGGTTGCTACCTAGGATCAACTTCCTTAGAAGTATTGGAATGCGAAATCCAGAGATCTTGAAAGTCTCAACTAGCCTTACCCAGGTTTTCTCTTTATCTTTGGAGGATAATTTGAAGCCCAAATACATGTATCTGATCAACGAACTTCGTAACGAAGTGAAATCACTGACCAAATACCCTATGTACCTAAGCTTGTCCTTGGATCAGAGAATTCGGCCTCGACATCGGTTCCTAGTTTCTCTTAAGAAAGCACCGAAGGGACCATTCCCTCTAAGTTCCCTTGTTCCAACTGATGAATGCTTTTGTCAGCAGTGGGCTGAAACCAGTCTAGACAAGTATCTAGAATTTCGGAAGCGATTGCTATTGAAGGAGTTTGCACAGAAATACGAAAGGAGATGA

Protein sequence

MAFLNLFSFSPTFHLDDFPTSSDFFSAPSLACSFHGGGVCCRRRKRTVRRLVVRSTHSNARILKPKRRSRFGQTLSPFDSDEDEESVDDFSSDEDEDDDDDGDISDVEYDDAKRKRTKLQSRAKKNHSQRENLRHAREIRGIRSFNDEKFFKVNANLHDFQDNTNDTEKQDFTFEEEVRTTNIGRKGKLMSKKSMAARFPRLAEEMELDEKWFPLLDYLTTFGLKDSHFLQMYERHMPSLQINVCSAQERLEYLLSVGVKQRDVRRILLRQPQILQYTVENNLKSHVAFLLSLGIPNSRVGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGIKEKDLAKVVQLSPQILVQRIDVSWNARYMFLSKEIGAPRDSVVKMVTKHPQLLHYSIDDGLLPRINFLRSIGMRNPEILKVSTSLTQVFSLSLEDNLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAPKGPFPLSSLVPTDECFCQQWAETSLDKYLEFRKRLLLKEFAQKYERR
Homology
[Close]
BLAST of Sed0021870 vs. NCBI nr
Match: XP_038897631.1 (transcription termination factor MTERF9, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 846.7 bits (2186), Expect = 1.1e-241
Identity = 455/532 (85.53%), Postives = 481/532 (90.41%), Query Frame = 0 

Query: 1   MAFLNLFSFSPTFHLDDFPTSSDFF-------SAPSLACSFHGGGVCCRRRKRTVRRLVV 60
           M  L+LFSFSPT H  DFP+SSD +       S+ + AC+FHG G+  R R+R VRR VV
Sbjct: 1   MVSLSLFSFSPTAH-SDFPSSSDLYLSTQFRLSSSTSACNFHGVGIGSRNRRRNVRRFVV 60

Query: 61  RSTHSNARILKPKRRSRFGQTLSPFDSDEDEESVDDFSSDEDEDDD--DDGDISDVEYDD 120
           RSTHSNARILKPKR+SRFGQTLSPFDSDED E VD+FSSD D+DD   D+GD SDVEY D
Sbjct: 61  RSTHSNARILKPKRKSRFGQTLSPFDSDEDGEDVDEFSSDGDDDDAWLDNGDFSDVEY-D 120

Query: 121 AKRKRTKLQSRAKKNHSQRENLRHAREIRGIRSFNDEKFFKVNANLHDFQDNTNDTEKQD 180
           AKRKRT+LQSR K N+SQR+NLRH RE RGIRS ND   F+VN N  DFQD+TNDT KQD
Sbjct: 121 AKRKRTRLQSRTKSNNSQRDNLRHPRESRGIRSSNDGNSFEVNTNRLDFQDSTNDTVKQD 180

Query: 181 FTFEEEVRTTNIGRKGKLMSKKSMAARFPRLAEEMELDEKWFPLLDYLTTFGLKDSHFLQ 240
           FT EEEV +TNIGRKGKLM+KK+M  RFPRLAEE+ELDEKWFPLLDYLTTFGLK+SHFLQ
Sbjct: 181 FTIEEEVCSTNIGRKGKLMTKKAMEIRFPRLAEEIELDEKWFPLLDYLTTFGLKESHFLQ 240

Query: 241 MYERHMPSLQINVCSAQERLEYLLSVGVKQRDVRRILLRQPQILQYTVENNLKSHVAFLL 300
           MYERHMPSLQINV SAQERLEYLLSVGVKQRDVRRILLRQPQIL+YTVENNLKSHVAFLL
Sbjct: 241 MYERHMPSLQINVYSAQERLEYLLSVGVKQRDVRRILLRQPQILEYTVENNLKSHVAFLL 300

Query: 301 SLGIPNSRVGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGIKEKDLAKVVQLSPQILVQR 360
           SLGIPNSRVGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGI+EKDL KVVQLSPQILVQR
Sbjct: 301 SLGIPNSRVGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGIEEKDLGKVVQLSPQILVQR 360

Query: 361 IDVSWNARYMFLSKEIGAPRDSVVKMVTKHPQLLHYSIDDGLLPRINFLRSIGMRNPEIL 420
           ID+SWN RYMFLSKEIGAPRD+VVKMVTKHPQLLHYSIDDGL PRINFLRSIGMRN EIL
Sbjct: 361 IDISWNTRYMFLSKEIGAPRDNVVKMVTKHPQLLHYSIDDGLRPRINFLRSIGMRNSEIL 420

Query: 421 KVSTSLTQVFSLSLEDNLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFLVS 480
           KV TSLTQVFSLSLEDNLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFLVS
Sbjct: 421 KVLTSLTQVFSLSLEDNLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFLVS 480

Query: 481 LKKAPKGPFPLSSLVPTDECFCQQWAETSLDKYLEFRKRLLLKEFAQKYERR 524
           LKKAPKGPFPLSSLVPTDECFCQQWAETSLDKYLEFRKRLLLKEFAQKYERR
Sbjct: 481 LKKAPKGPFPLSSLVPTDECFCQQWAETSLDKYLEFRKRLLLKEFAQKYERR 530

[Close]
BLAST of Sed0021870 vs. NCBI nr
Match: XP_038897632.1 (transcription termination factor MTERF9, chloroplastic isoform X2 [Benincasa hispida])

HSP 1 Score: 832.8 bits (2150), Expect = 1.6e-237
Identity = 451/532 (84.77%), Postives = 475/532 (89.29%), Query Frame = 0 

Query: 1   MAFLNLFSFSPTFHLDDFPTSSDFF-------SAPSLACSFHGGGVCCRRRKRTVRRLVV 60
           M  L+LFSFSPT H  DFP+SSD +       S+ + AC+FHG G+  R R+R VRR VV
Sbjct: 1   MVSLSLFSFSPTAH-SDFPSSSDLYLSTQFRLSSSTSACNFHGVGIGSRNRRRNVRRFVV 60

Query: 61  RSTHSNARILKPKRRSRFGQTLSPFDSDEDEESVDDFSSDEDEDDD--DDGDISDVEYDD 120
           RSTHSNARILKPKR+SRFGQTLSPFDSDED E VD+FSSD D+DD   D+GD SDVEY D
Sbjct: 61  RSTHSNARILKPKRKSRFGQTLSPFDSDEDGEDVDEFSSDGDDDDAWLDNGDFSDVEY-D 120

Query: 121 AKRKRTKLQSRAKKNHSQRENLRHAREIRGIRSFNDEKFFKVNANLHDFQDNTNDTEKQD 180
           AKRKRT+LQSR K       NLRH RE RGIRS ND   F+VN N  DFQD+TNDT KQD
Sbjct: 121 AKRKRTRLQSRTK------NNLRHPRESRGIRSSNDGNSFEVNTNRLDFQDSTNDTVKQD 180

Query: 181 FTFEEEVRTTNIGRKGKLMSKKSMAARFPRLAEEMELDEKWFPLLDYLTTFGLKDSHFLQ 240
           FT EEEV +TNIGRKGKLM+KK+M  RFPRLAEE+ELDEKWFPLLDYLTTFGLK+SHFLQ
Sbjct: 181 FTIEEEVCSTNIGRKGKLMTKKAMEIRFPRLAEEIELDEKWFPLLDYLTTFGLKESHFLQ 240

Query: 241 MYERHMPSLQINVCSAQERLEYLLSVGVKQRDVRRILLRQPQILQYTVENNLKSHVAFLL 300
           MYERHMPSLQINV SAQERLEYLLSVGVKQRDVRRILLRQPQIL+YTVENNLKSHVAFLL
Sbjct: 241 MYERHMPSLQINVYSAQERLEYLLSVGVKQRDVRRILLRQPQILEYTVENNLKSHVAFLL 300

Query: 301 SLGIPNSRVGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGIKEKDLAKVVQLSPQILVQR 360
           SLGIPNSRVGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGI+EKDL KVVQLSPQILVQR
Sbjct: 301 SLGIPNSRVGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGIEEKDLGKVVQLSPQILVQR 360

Query: 361 IDVSWNARYMFLSKEIGAPRDSVVKMVTKHPQLLHYSIDDGLLPRINFLRSIGMRNPEIL 420
           ID+SWN RYMFLSKEIGAPRD+VVKMVTKHPQLLHYSIDDGL PRINFLRSIGMRN EIL
Sbjct: 361 IDISWNTRYMFLSKEIGAPRDNVVKMVTKHPQLLHYSIDDGLRPRINFLRSIGMRNSEIL 420

Query: 421 KVSTSLTQVFSLSLEDNLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFLVS 480
           KV TSLTQVFSLSLEDNLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFLVS
Sbjct: 421 KVLTSLTQVFSLSLEDNLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFLVS 480

Query: 481 LKKAPKGPFPLSSLVPTDECFCQQWAETSLDKYLEFRKRLLLKEFAQKYERR 524
           LKKAPKGPFPLSSLVPTDECFCQQWAETSLDKYLEFRKRLLLKEFAQKYERR
Sbjct: 481 LKKAPKGPFPLSSLVPTDECFCQQWAETSLDKYLEFRKRLLLKEFAQKYERR 524

[Close]
BLAST of Sed0021870 vs. NCBI nr
Match: XP_008462974.1 (PREDICTED: transcription termination factor MTERF9, chloroplastic [Cucumis melo])

HSP 1 Score: 811.6 bits (2095), Expect = 3.9e-231
Identity = 438/533 (82.18%), Postives = 473/533 (88.74%), Query Frame = 0 

Query: 1   MAFLNLFSFSPTFHLDDFPTSSDFF-------SAPSLACSFHGGGVCCRRRKRTVRRLVV 60
           MA L+LFSFSPT H  DFP+SSDF+       ++ + A SF    +  R R+R VRR VV
Sbjct: 1   MASLSLFSFSPTLH-SDFPSSSDFYFSSQFLLTSSTSASSFRAVPIGSRSRRRNVRRFVV 60

Query: 61  RSTHSNARILKPKRRSRFGQTLSPFDSDEDEESVDDFSSDEDEDDD---DDGDISDVEYD 120
           RSTHSNA ILKPK RSRFGQTLSP+D+DED + V++FSSD D+DDD   D+GD SDVEY 
Sbjct: 61  RSTHSNATILKPKWRSRFGQTLSPYDTDEDGDDVEEFSSDGDDDDDAWLDNGDFSDVEY- 120

Query: 121 DAKRKRTKLQSRAKKNHSQRENLRHAREIRGIRSFNDEKFFKVNANLHDFQDNTNDTEKQ 180
           DAKRKR K QS+ + N+SQR NLRH  E RGI+  ND K FKV +N  DFQD TNDT KQ
Sbjct: 121 DAKRKRAKSQSKTRNNNSQRGNLRHPSEGRGIKFSNDGKSFKVKSNHLDFQDITNDTVKQ 180

Query: 181 DFTFEEEVRTTNIGRKGKLMSKKSMAARFPRLAEEMELDEKWFPLLDYLTTFGLKDSHFL 240
           DF  ++EVR+T+ GRKGK+M+KKSM  RFPRLAEE+ELDEKWFPLLDYLTTFGLK+SHFL
Sbjct: 181 DFNVDKEVRSTHTGRKGKMMTKKSMEIRFPRLAEEIELDEKWFPLLDYLTTFGLKESHFL 240

Query: 241 QMYERHMPSLQINVCSAQERLEYLLSVGVKQRDVRRILLRQPQILQYTVENNLKSHVAFL 300
           QMYERHMPSLQINV SAQERLEYLLSVGVKQRDVRRILLRQPQIL+YTVENNLKSHVAFL
Sbjct: 241 QMYERHMPSLQINVYSAQERLEYLLSVGVKQRDVRRILLRQPQILEYTVENNLKSHVAFL 300

Query: 301 LSLGIPNSRVGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGIKEKDLAKVVQLSPQILVQ 360
           LSLGIPNSRVGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGI+EKDL KVVQLSPQILVQ
Sbjct: 301 LSLGIPNSRVGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGIQEKDLGKVVQLSPQILVQ 360

Query: 361 RIDVSWNARYMFLSKEIGAPRDSVVKMVTKHPQLLHYSIDDGLLPRINFLRSIGMRNPEI 420
           RID+SWN RYMFLSKEIGAPRD+VVKMVTKHPQLLHYSI+DGLLPRINFLRSIGMRN EI
Sbjct: 361 RIDISWNTRYMFLSKEIGAPRDNVVKMVTKHPQLLHYSINDGLLPRINFLRSIGMRNSEI 420

Query: 421 LKVSTSLTQVFSLSLEDNLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFLV 480
           LKVSTSLTQVFSLSLEDNLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFLV
Sbjct: 421 LKVSTSLTQVFSLSLEDNLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFLV 480

Query: 481 SLKKAPKGPFPLSSLVPTDECFCQQWAETSLDKYLEFRKRLLLKEFAQKYERR 524
           SLKKAPKGPFPLSS VPTDECFC+QWAETSLDKYLEFRKRLLLKEFA+KYERR
Sbjct: 481 SLKKAPKGPFPLSSFVPTDECFCEQWAETSLDKYLEFRKRLLLKEFAEKYERR 531

[Close]
BLAST of Sed0021870 vs. NCBI nr
Match: XP_022976275.1 (transcription termination factor MTERF9, chloroplastic [Cucurbita maxima])

HSP 1 Score: 806.6 bits (2082), Expect = 1.3e-229
Identity = 438/537 (81.56%), Postives = 470/537 (87.52%), Query Frame = 0 

Query: 1   MAFLNLFSFSPTFHLDDFPTSSDF-------FSAPSLACSFHGGGVCC-RRRKRTVRRLV 60
           MA L LFSFSPT H  DFP+SSDF       +S  + AC FHG G+   RRR+R+VRR +
Sbjct: 1   MASLFLFSFSPTIH-SDFPSSSDFYPSTQFSYSTSTSACKFHGVGIASGRRRRRSVRRFL 60

Query: 61  VRSTHSNARILKPKRRSRFGQTLSPFDSDEDEESVDDFSSDEDEDDDDD------GDISD 120
           VRSTHSNARILKPKRRSRFGQ LSPFDSD+D E VDD SSDED+D+DDD      G++SD
Sbjct: 61  VRSTHSNARILKPKRRSRFGQNLSPFDSDDDGEDVDDLSSDEDDDEDDDDTWLYNGNVSD 120

Query: 121 VEYDDAKRKRTKLQSRAKKNHSQRENLRHAREIRGIRSFNDEKFFKVNANLHDFQDNTND 180
           VEY D KRKR KLQ+R + ++SQR+NLRH RE RGIRS          +N  D QD TND
Sbjct: 121 VEY-DTKRKRAKLQNRTRNSNSQRDNLRHPRESRGIRS----------SNRFDLQDITND 180

Query: 181 TEKQDFTFEEEVRTTNIGRKGKLMSKKSMAARFPRLAEEMELDEKWFPLLDYLTTFGLKD 240
           TE QD T EEE  +TN+ ++GKLM+KK++  RFPRLAEE+ELD+KW+PLLDYLTTFGLK+
Sbjct: 181 TENQDDTIEEEAGSTNVDKQGKLMTKKAIENRFPRLAEEIELDKKWYPLLDYLTTFGLKE 240

Query: 241 SHFLQMYERHMPSLQINVCSAQERLEYLLSVGVKQRDVRRILLRQPQILQYTVENNLKSH 300
           SHFLQMYER MPSLQINV SAQERLEYLLSVGVKQRDVRRIL+RQPQIL+YTVENNLKSH
Sbjct: 241 SHFLQMYERRMPSLQINVNSAQERLEYLLSVGVKQRDVRRILMRQPQILEYTVENNLKSH 300

Query: 301 VAFLLSLGIPNSRVGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGIKEKDLAKVVQLSPQ 360
           VAFLLSLGIPNSRVGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGIKEKDL KVVQLSPQ
Sbjct: 301 VAFLLSLGIPNSRVGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGIKEKDLGKVVQLSPQ 360

Query: 361 ILVQRIDVSWNARYMFLSKEIGAPRDSVVKMVTKHPQLLHYSIDDGLLPRINFLRSIGMR 420
           ILVQRIDVSWN RYMFLSKEIGAPRD+VVKMVTKHPQLLHYSIDDGLLPRINFLRSIGMR
Sbjct: 361 ILVQRIDVSWNTRYMFLSKEIGAPRDNVVKMVTKHPQLLHYSIDDGLLPRINFLRSIGMR 420

Query: 421 NPEILKVSTSLTQVFSLSLEDNLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRH 480
           N EILKV TSLTQVFSLSLEDNLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRH
Sbjct: 421 NSEILKVITSLTQVFSLSLEDNLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRH 480

Query: 481 RFLVSLKKAPKGPFPLSSLVPTDECFCQQWAETSLDKYLEFRKRLLLKEFAQKYERR 524
           RFLVSLKKAPKGPFPLSS VPTDECFCQQWAETSLDKYLEFRKRLLLKEFAQKYERR
Sbjct: 481 RFLVSLKKAPKGPFPLSSFVPTDECFCQQWAETSLDKYLEFRKRLLLKEFAQKYERR 525

[Close]
BLAST of Sed0021870 vs. NCBI nr
Match: XP_022936628.1 (transcription termination factor MTERF9, chloroplastic [Cucurbita moschata])

HSP 1 Score: 805.8 bits (2080), Expect = 2.2e-229
Identity = 438/539 (81.26%), Postives = 470/539 (87.20%), Query Frame = 0 

Query: 1   MAFLNLFSFSPTFHLDDFPTSSDF-------FSAPSLACSFHGGGVCC-RRRKRTVRRLV 60
           MA L LFSFSPT H  DFP+SSDF       +S+ + AC FHG G+   RRR+R+V R +
Sbjct: 1   MASLFLFSFSPTIH-SDFPSSSDFYPSTQFLYSSSTSACKFHGVGIASRRRRRRSVHRFL 60

Query: 61  VRSTHSNARILKPKRRSRFGQTLSPFDSDEDEESVDDFSSDEDEDDDDD--------GDI 120
           VRSTHSNARILKPKRRSRFGQ LSPFDSD+D E VDD SSDED+DDDDD        G++
Sbjct: 61  VRSTHSNARILKPKRRSRFGQNLSPFDSDDDGEDVDDLSSDEDDDDDDDDDDTWLYNGNV 120

Query: 121 SDVEYDDAKRKRTKLQSRAKKNHSQRENLRHAREIRGIRSFNDEKFFKVNANLHDFQDNT 180
           SDVEY D KRKR KLQ+R + ++SQR+NLRH RE RGIRS          +N  D QD T
Sbjct: 121 SDVEY-DTKRKRAKLQNRTRNSNSQRDNLRHPRESRGIRS----------SNRFDLQDIT 180

Query: 181 NDTEKQDFTFEEEVRTTNIGRKGKLMSKKSMAARFPRLAEEMELDEKWFPLLDYLTTFGL 240
           NDTE QD T EEE  +TN+ ++GKLM+K++M  RFPRLAEE+ELD+KW+PLLDYLTTFGL
Sbjct: 181 NDTENQDDTIEEEAGSTNVDKQGKLMTKEAMENRFPRLAEEIELDKKWYPLLDYLTTFGL 240

Query: 241 KDSHFLQMYERHMPSLQINVCSAQERLEYLLSVGVKQRDVRRILLRQPQILQYTVENNLK 300
           K+SHFLQMYER MPSLQINV SAQERLEYLLSVGVKQRDVRRIL+RQPQIL+YTVENNLK
Sbjct: 241 KESHFLQMYERRMPSLQINVNSAQERLEYLLSVGVKQRDVRRILMRQPQILEYTVENNLK 300

Query: 301 SHVAFLLSLGIPNSRVGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGIKEKDLAKVVQLS 360
           SHVAFLLSLGIPNSRVGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGIKEKDL KVVQLS
Sbjct: 301 SHVAFLLSLGIPNSRVGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGIKEKDLGKVVQLS 360

Query: 361 PQILVQRIDVSWNARYMFLSKEIGAPRDSVVKMVTKHPQLLHYSIDDGLLPRINFLRSIG 420
           PQILVQRIDVSWN RYMFLSKEIGAPRD+VVKMVTKHPQLLHYSIDDGLLPRINFLRSIG
Sbjct: 361 PQILVQRIDVSWNTRYMFLSKEIGAPRDNVVKMVTKHPQLLHYSIDDGLLPRINFLRSIG 420

Query: 421 MRNPEILKVSTSLTQVFSLSLEDNLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRP 480
           MRN EILKV TSLTQVFSLSLEDNLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRP
Sbjct: 421 MRNSEILKVITSLTQVFSLSLEDNLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRP 480

Query: 481 RHRFLVSLKKAPKGPFPLSSLVPTDECFCQQWAETSLDKYLEFRKRLLLKEFAQKYERR 524
           RHRFLVSLKKAPKGPFPLSS VPTDECFCQQWAETSLDKYLEFRKRLLLKEFAQKYERR
Sbjct: 481 RHRFLVSLKKAPKGPFPLSSFVPTDECFCQQWAETSLDKYLEFRKRLLLKEFAQKYERR 527

[Close]
BLAST of Sed0021870 vs. ExPASy Swiss-Prot
Match: Q9FM80 (Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF9 PE=2 SV=1)

HSP 1 Score: 583.6 bits (1503), Expect = 2.3e-165
Identity = 326/527 (61.86%), Postives = 394/527 (74.76%), Query Frame = 0 

Query: 1   MAFLNLFSFSPTFHLDDFPTSSDFFSAPSLACSFHGGGVCCRRRKRTVRRLVVRSTHSNA 60
           MA  +L+ F     L   P+ S  F   S  CS        RR  R  R  VV   HSN 
Sbjct: 1   MAGFSLYCFKNPRILFTLPSESPLFVLGSDKCS-----PATRRPSRKTRGFVVTYAHSNP 60

Query: 61  RILKPKRRSRFGQTLSPFDSDEDEESVDDFSSDEDEDDDDD----GDISDVEYDDAKRKR 120
           +I+ PK++SR+GQTLSP+DSDED++       D+D+DDDDD     D ++V   + K+ +
Sbjct: 61  KIINPKKKSRYGQTLSPYDSDEDDD-------DDDDDDDDDWLLNDDFAEVTEYEKKKPK 120

Query: 121 TKLQSRAKKNHSQRENLRHAREIRGIRSFNDEKFFKVNANLHDFQDNTNDTEKQDFTFEE 180
           +  Q+ AKK  S ++ +     ++   S  DE             D+ +     + T E+
Sbjct: 121 SHKQTIAKK--SVKKGI-----VKPEESETDE-------------DDLDLGISPNATSEK 180

Query: 181 EVRTTNIGRKGKLMSKKSMAARFPRLAEEMELDEKWFPLLDYLTTFGLKDSHFLQMYERH 240
           +  +  +  +GK+ S+K +   +PRLAEE+++D K  PLLDYL+TFGLK+SHF+QMYERH
Sbjct: 181 KKESWRLDGRGKMSSRKYVEKLYPRLAEEIDIDPKCVPLLDYLSTFGLKESHFVQMYERH 240

Query: 241 MPSLQINVCSAQERLEYLLSVGVKQRDVRRILLRQPQILQYTVENNLKSHVAFLLSLGIP 300
           MPSLQINV SAQERL+YLLSVGVK RD++R+LLRQPQILQYTVENNLK+H++FL+ LGIP
Sbjct: 241 MPSLQINVFSAQERLDYLLSVGVKHRDIKRMLLRQPQILQYTVENNLKAHISFLMGLGIP 300

Query: 301 NSRVGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGIKEKDLAKVVQLSPQILVQRIDVSW 360
           NS++GQI+AA PSLFSYSVENSL+PT+RYL+EEVGIKE D+ KVVQLSPQILVQR+D++W
Sbjct: 301 NSKIGQIVAATPSLFSYSVENSLRPTIRYLIEEVGIKETDVGKVVQLSPQILVQRLDITW 360

Query: 361 NARYMFLSKEIGAPRDSVVKMVTKHPQLLHYSIDDGLLPRINFLRSIGMRNPEILKVSTS 420
           N RYMFLSKE+GAPRDSVVKMV KHPQLLHYSIDDG LPRINFLRSIGM N +ILKV TS
Sbjct: 361 NTRYMFLSKELGAPRDSVVKMVKKHPQLLHYSIDDGFLPRINFLRSIGMCNSDILKVLTS 420

Query: 421 LTQVFSLSLEDNLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAP 480
           LTQV SLSLEDNLKPKYMYL+NEL NEV  LTKYPMYLSLSLDQRIRPRHRFLV LKK  
Sbjct: 421 LTQVLSLSLEDNLKPKYMYLVNELNNEVHILTKYPMYLSLSLDQRIRPRHRFLVELKKVR 480

Query: 481 KGPFPLSSLVPTDECFCQQWAETSLDKYLEFRKRLLLKEFAQKYERR 524
           KGPFPLSSLVP DE FCQQWA TS+D YL FR+RLLLKEFA KY++R
Sbjct: 481 KGPFPLSSLVPNDESFCQQWAGTSVDTYLAFRQRLLLKEFANKYDKR 495

[Close]
BLAST of Sed0021870 vs. ExPASy Swiss-Prot
Match: Q84X53 (Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF1 PE=2 SV=2)

HSP 1 Score: 104.8 bits (260), Expect = 3.1e-21
Identity = 64/223 (28.70%), Postives = 117/223 (52.47%), Query Frame = 0 

Query: 248 QERLEYLLSVGVKQRDVRRILLRQPQILQYTVENNLKSHVAFLLSLGIPNSRVGQIIAAA 307
           +E+L YL  + V   D  + L   P +    + +++ S    L S G+    VG+I+   
Sbjct: 34  REKLIYLQDLNV---DPHKALRVNPSLRSAPI-SSVVSVETLLSSTGLSRPAVGRILDMF 93

Query: 308 PSLFSYSVENSLKPTVRYLVEEVGIKEKDLAKVVQLSPQILVQRIDVSWNARYMFLSKEI 367
           P L +   E+ + P +R+L  E+ I E+D+ K +   P++L+  +D        FL    
Sbjct: 94  PDLLTSDPESEILPVLRFLSNEISISEQDIPKSISRCPRLLISSVDYQLRPALTFLKTLG 153

Query: 368 GAPRDSVVKMVTKHPQLLHYSIDDGLLPRINFL-RSIGMRNPEILKVSTSLTQVFSLSLE 427
              RD++    +++  LL  +++  L+P+I +L   +G    E+ K+      + + S++
Sbjct: 154 FVGRDTI---TSRNTVLLVSNVERTLIPKIEYLEEGLGFTREEVAKMVVRSPALLTYSVD 213

Query: 428 DNLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFL 470
           +NL PK  + I E+R +VK L ++P Y S SL+++I+PRHR L
Sbjct: 214 NNLVPKVEFFIEEMRGDVKELKRFPQYFSFSLERKIKPRHRLL 249

[Close]
BLAST of Sed0021870 vs. ExPASy Swiss-Prot
Match: F4IHL3 (Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF2 PE=3 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 6.9e-21
Identity = 60/223 (26.91%), Postives = 115/223 (51.57%), Query Frame = 0 

Query: 248 QERLEYLLSVGVKQRDVRRILLRQPQILQYTVENNLKSHVAFLLSLGIPNSRVGQIIAAA 307
           ++++ YL   G+   +V R+L  +P ++  ++E   K  V +   LGIP   + +I+   
Sbjct: 353 EKKINYLKEFGLSTEEVGRLLAYKPHLMGCSIEERWKPLVKYFYYLGIPKEGMKRILVVK 412

Query: 308 PSLFSYSVENSLKPTVRYLVEEVGIKEKDLAKVVQLSPQILVQRIDVSWNARYMFLSKEI 367
           P L+   +E ++ P VR+L +E+GI  + +  ++   P +L   +        +FL    
Sbjct: 413 PILYCIDLEKTIAPKVRFL-QEMGIPNEAIGNMLVKFPSLLTNSLYKKIRPVVIFLLTRA 472

Query: 368 GAPRDSVVKMVTKHPQLLHYSIDDGLLPRINFLRSIGMRNPEILKVSTSLTQVFSLSLED 427
           G  +  + K++   P LL  SI   L P + +  S+G+R  ++ ++      +   ++ D
Sbjct: 473 GVTQKDIGKVIAMDPALLGCSIGTKLEPNMRYYISLGIRFYQLGEMIADFPMLLRYNV-D 532

Query: 428 NLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFLV 471
           NL+PKY YL   +   ++ L ++P + S SL++RI PRH  +V
Sbjct: 533 NLRPKYRYLRRTMIRPLQDLIEFPRFFSYSLERRIIPRHTIMV 573

[Close]
BLAST of Sed0021870 vs. ExPASy Swiss-Prot
Match: Q6AUK6 (Transcription termination factor MTERF4, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0404000 PE=2 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 5.9e-20
Identity = 72/317 (22.71%), Postives = 147/317 (46.37%), Query Frame = 0 

Query: 190 MSKKSMAARFPRLAEEMELDEKWFPLLDYLTTFGLKDSHFLQMYERHMPSLQIN-VCSAQ 249
           +S + +AA +P LA    + +   P+LDYL   G++      +  R+   L  + V    
Sbjct: 124 LSNEDLAA-YP-LALGCSVRKNMVPVLDYLGKLGVRQDALPDLLRRYPQVLHASVVVDLA 183

Query: 250 ERLEYLLSVGVKQRDVRRILLRQPQILQYTVENNLKSHVAFLLSLGIPNSRVGQIIAAAP 309
             ++YL  + V+  DV R+L R P++L + +E  + + +A+L+ +G+   +VG +I   P
Sbjct: 184 PVVKYLQGMDVRPHDVPRVLERYPELLGFKLEGTMSTSIAYLVGIGVARRQVGSVITRFP 243

Query: 310 SLFSYSVENSLKPTVRYLVEEVGIKEKDLAKVVQLSPQILVQRIDVSWNARYMFLSKEIG 369
            +    V   +KP V +L E +G++   +A++++  P +L   ++         L  E G
Sbjct: 244 EVLGMRVGKIIKPFVEHL-EGIGLQRLAIARIIEKKPYVLGFGLEDKVKPNIEAL-LEFG 303

Query: 370 APRDSVVKMVTKHPQLLHYSIDDGL----------------------------------- 429
             ++++  +V ++P +L   + D L                                   
Sbjct: 304 VRKEALAFIVAQYPDILGIELRDKLATQQSLFESSILVSSEDFGRVIERMPQAISLGRTA 363

Query: 430 -LPRINFLRSIGMRNPEILKVSTSLTQVFSLSLEDNLKPKYMYLINELRNEVKSLTKYPM 470
            L  +NFL S G    ++ K+  +  Q+ +L++ D +K  + Y  NE+  +++ L ++P 
Sbjct: 364 VLKHVNFLTSCGFLLSQVSKMVVACPQLLALNM-DIMKMSFEYFQNEMERDLEELVEFPA 423

[Close]
BLAST of Sed0021870 vs. ExPASy Swiss-Prot
Match: Q9SZL6 (Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTERF6 PE=2 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 1.7e-19
Identity = 63/211 (29.86%), Postives = 113/211 (53.55%), Query Frame = 0 

Query: 195 MAARFPRLAEEMELDEKWFPLLDYLTTFGLKDSHFLQMYERHMPSLQINVCSAQERLEYL 254
           + +R P++   + LDE+  P+++ L++ G           +  P L  +V   +E+L  L
Sbjct: 62  IVSRCPKIL-TLRLDERLIPMVECLSSLGRNPREVASAITKFPPILSHSV---EEKLCPL 121

Query: 255 L----SVGVKQRDVRRILLRQPQILQYTVENNLKSHVAFLLSLGI-PNSRVGQIIAAAPS 314
           L    ++GV +  + +++L  P+++ Y+++  L   V+FL SLG+  +  +G+++   P 
Sbjct: 122 LAFFQALGVPETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLVKNPF 181

Query: 315 LFSYSVENSLKPTVRYLVEEVGIKEKDLAKVVQLSPQILVQRIDVSWNARYMFLSKEIGA 374
           L  YSV+  L+PT  +L   VG+ E  +  VV   PQ+L + ++      Y +L KE G 
Sbjct: 182 LMGYSVDKRLRPTTEFLKSSVGLSEDGIKSVVMNFPQLLCRDVNKILKPNYDYL-KECGF 241

Query: 375 PRDSVVKMVTKHPQLLHYSIDDGLLPRINFL 401
               +  MVT +PQ+L  S+ + L PRI FL
Sbjct: 242 GDSQIATMVTGYPQILIKSVKNSLQPRIRFL 267

[Close]
BLAST of Sed0021870 vs. ExPASy TrEMBL
Match: A0A1S3CI38 (transcription termination factor MTERF9, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103501230 PE=3 SV=1)

HSP 1 Score: 811.6 bits (2095), Expect = 1.9e-231
Identity = 438/533 (82.18%), Postives = 473/533 (88.74%), Query Frame = 0 

Query: 1   MAFLNLFSFSPTFHLDDFPTSSDFF-------SAPSLACSFHGGGVCCRRRKRTVRRLVV 60
           MA L+LFSFSPT H  DFP+SSDF+       ++ + A SF    +  R R+R VRR VV
Sbjct: 1   MASLSLFSFSPTLH-SDFPSSSDFYFSSQFLLTSSTSASSFRAVPIGSRSRRRNVRRFVV 60

Query: 61  RSTHSNARILKPKRRSRFGQTLSPFDSDEDEESVDDFSSDEDEDDD---DDGDISDVEYD 120
           RSTHSNA ILKPK RSRFGQTLSP+D+DED + V++FSSD D+DDD   D+GD SDVEY 
Sbjct: 61  RSTHSNATILKPKWRSRFGQTLSPYDTDEDGDDVEEFSSDGDDDDDAWLDNGDFSDVEY- 120

Query: 121 DAKRKRTKLQSRAKKNHSQRENLRHAREIRGIRSFNDEKFFKVNANLHDFQDNTNDTEKQ 180
           DAKRKR K QS+ + N+SQR NLRH  E RGI+  ND K FKV +N  DFQD TNDT KQ
Sbjct: 121 DAKRKRAKSQSKTRNNNSQRGNLRHPSEGRGIKFSNDGKSFKVKSNHLDFQDITNDTVKQ 180

Query: 181 DFTFEEEVRTTNIGRKGKLMSKKSMAARFPRLAEEMELDEKWFPLLDYLTTFGLKDSHFL 240
           DF  ++EVR+T+ GRKGK+M+KKSM  RFPRLAEE+ELDEKWFPLLDYLTTFGLK+SHFL
Sbjct: 181 DFNVDKEVRSTHTGRKGKMMTKKSMEIRFPRLAEEIELDEKWFPLLDYLTTFGLKESHFL 240

Query: 241 QMYERHMPSLQINVCSAQERLEYLLSVGVKQRDVRRILLRQPQILQYTVENNLKSHVAFL 300
           QMYERHMPSLQINV SAQERLEYLLSVGVKQRDVRRILLRQPQIL+YTVENNLKSHVAFL
Sbjct: 241 QMYERHMPSLQINVYSAQERLEYLLSVGVKQRDVRRILLRQPQILEYTVENNLKSHVAFL 300

Query: 301 LSLGIPNSRVGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGIKEKDLAKVVQLSPQILVQ 360
           LSLGIPNSRVGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGI+EKDL KVVQLSPQILVQ
Sbjct: 301 LSLGIPNSRVGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGIQEKDLGKVVQLSPQILVQ 360

Query: 361 RIDVSWNARYMFLSKEIGAPRDSVVKMVTKHPQLLHYSIDDGLLPRINFLRSIGMRNPEI 420
           RID+SWN RYMFLSKEIGAPRD+VVKMVTKHPQLLHYSI+DGLLPRINFLRSIGMRN EI
Sbjct: 361 RIDISWNTRYMFLSKEIGAPRDNVVKMVTKHPQLLHYSINDGLLPRINFLRSIGMRNSEI 420

Query: 421 LKVSTSLTQVFSLSLEDNLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFLV 480
           LKVSTSLTQVFSLSLEDNLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFLV
Sbjct: 421 LKVSTSLTQVFSLSLEDNLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFLV 480

Query: 481 SLKKAPKGPFPLSSLVPTDECFCQQWAETSLDKYLEFRKRLLLKEFAQKYERR 524
           SLKKAPKGPFPLSS VPTDECFC+QWAETSLDKYLEFRKRLLLKEFA+KYERR
Sbjct: 481 SLKKAPKGPFPLSSFVPTDECFCEQWAETSLDKYLEFRKRLLLKEFAEKYERR 531

[Close]
BLAST of Sed0021870 vs. ExPASy TrEMBL
Match: A0A6J1IJ03 (transcription termination factor MTERF9, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111476719 PE=3 SV=1)

HSP 1 Score: 806.6 bits (2082), Expect = 6.1e-230
Identity = 438/537 (81.56%), Postives = 470/537 (87.52%), Query Frame = 0 

Query: 1   MAFLNLFSFSPTFHLDDFPTSSDF-------FSAPSLACSFHGGGVCC-RRRKRTVRRLV 60
           MA L LFSFSPT H  DFP+SSDF       +S  + AC FHG G+   RRR+R+VRR +
Sbjct: 1   MASLFLFSFSPTIH-SDFPSSSDFYPSTQFSYSTSTSACKFHGVGIASGRRRRRSVRRFL 60

Query: 61  VRSTHSNARILKPKRRSRFGQTLSPFDSDEDEESVDDFSSDEDEDDDDD------GDISD 120
           VRSTHSNARILKPKRRSRFGQ LSPFDSD+D E VDD SSDED+D+DDD      G++SD
Sbjct: 61  VRSTHSNARILKPKRRSRFGQNLSPFDSDDDGEDVDDLSSDEDDDEDDDDTWLYNGNVSD 120

Query: 121 VEYDDAKRKRTKLQSRAKKNHSQRENLRHAREIRGIRSFNDEKFFKVNANLHDFQDNTND 180
           VEY D KRKR KLQ+R + ++SQR+NLRH RE RGIRS          +N  D QD TND
Sbjct: 121 VEY-DTKRKRAKLQNRTRNSNSQRDNLRHPRESRGIRS----------SNRFDLQDITND 180

Query: 181 TEKQDFTFEEEVRTTNIGRKGKLMSKKSMAARFPRLAEEMELDEKWFPLLDYLTTFGLKD 240
           TE QD T EEE  +TN+ ++GKLM+KK++  RFPRLAEE+ELD+KW+PLLDYLTTFGLK+
Sbjct: 181 TENQDDTIEEEAGSTNVDKQGKLMTKKAIENRFPRLAEEIELDKKWYPLLDYLTTFGLKE 240

Query: 241 SHFLQMYERHMPSLQINVCSAQERLEYLLSVGVKQRDVRRILLRQPQILQYTVENNLKSH 300
           SHFLQMYER MPSLQINV SAQERLEYLLSVGVKQRDVRRIL+RQPQIL+YTVENNLKSH
Sbjct: 241 SHFLQMYERRMPSLQINVNSAQERLEYLLSVGVKQRDVRRILMRQPQILEYTVENNLKSH 300

Query: 301 VAFLLSLGIPNSRVGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGIKEKDLAKVVQLSPQ 360
           VAFLLSLGIPNSRVGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGIKEKDL KVVQLSPQ
Sbjct: 301 VAFLLSLGIPNSRVGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGIKEKDLGKVVQLSPQ 360

Query: 361 ILVQRIDVSWNARYMFLSKEIGAPRDSVVKMVTKHPQLLHYSIDDGLLPRINFLRSIGMR 420
           ILVQRIDVSWN RYMFLSKEIGAPRD+VVKMVTKHPQLLHYSIDDGLLPRINFLRSIGMR
Sbjct: 361 ILVQRIDVSWNTRYMFLSKEIGAPRDNVVKMVTKHPQLLHYSIDDGLLPRINFLRSIGMR 420

Query: 421 NPEILKVSTSLTQVFSLSLEDNLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRH 480
           N EILKV TSLTQVFSLSLEDNLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRH
Sbjct: 421 NSEILKVITSLTQVFSLSLEDNLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRH 480

Query: 481 RFLVSLKKAPKGPFPLSSLVPTDECFCQQWAETSLDKYLEFRKRLLLKEFAQKYERR 524
           RFLVSLKKAPKGPFPLSS VPTDECFCQQWAETSLDKYLEFRKRLLLKEFAQKYERR
Sbjct: 481 RFLVSLKKAPKGPFPLSSFVPTDECFCQQWAETSLDKYLEFRKRLLLKEFAQKYERR 525

[Close]
BLAST of Sed0021870 vs. ExPASy TrEMBL
Match: A0A6J1FDR7 (transcription termination factor MTERF9, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111443171 PE=3 SV=1)

HSP 1 Score: 805.8 bits (2080), Expect = 1.0e-229
Identity = 438/539 (81.26%), Postives = 470/539 (87.20%), Query Frame = 0 

Query: 1   MAFLNLFSFSPTFHLDDFPTSSDF-------FSAPSLACSFHGGGVCC-RRRKRTVRRLV 60
           MA L LFSFSPT H  DFP+SSDF       +S+ + AC FHG G+   RRR+R+V R +
Sbjct: 1   MASLFLFSFSPTIH-SDFPSSSDFYPSTQFLYSSSTSACKFHGVGIASRRRRRRSVHRFL 60

Query: 61  VRSTHSNARILKPKRRSRFGQTLSPFDSDEDEESVDDFSSDEDEDDDDD--------GDI 120
           VRSTHSNARILKPKRRSRFGQ LSPFDSD+D E VDD SSDED+DDDDD        G++
Sbjct: 61  VRSTHSNARILKPKRRSRFGQNLSPFDSDDDGEDVDDLSSDEDDDDDDDDDDTWLYNGNV 120

Query: 121 SDVEYDDAKRKRTKLQSRAKKNHSQRENLRHAREIRGIRSFNDEKFFKVNANLHDFQDNT 180
           SDVEY D KRKR KLQ+R + ++SQR+NLRH RE RGIRS          +N  D QD T
Sbjct: 121 SDVEY-DTKRKRAKLQNRTRNSNSQRDNLRHPRESRGIRS----------SNRFDLQDIT 180

Query: 181 NDTEKQDFTFEEEVRTTNIGRKGKLMSKKSMAARFPRLAEEMELDEKWFPLLDYLTTFGL 240
           NDTE QD T EEE  +TN+ ++GKLM+K++M  RFPRLAEE+ELD+KW+PLLDYLTTFGL
Sbjct: 181 NDTENQDDTIEEEAGSTNVDKQGKLMTKEAMENRFPRLAEEIELDKKWYPLLDYLTTFGL 240

Query: 241 KDSHFLQMYERHMPSLQINVCSAQERLEYLLSVGVKQRDVRRILLRQPQILQYTVENNLK 300
           K+SHFLQMYER MPSLQINV SAQERLEYLLSVGVKQRDVRRIL+RQPQIL+YTVENNLK
Sbjct: 241 KESHFLQMYERRMPSLQINVNSAQERLEYLLSVGVKQRDVRRILMRQPQILEYTVENNLK 300

Query: 301 SHVAFLLSLGIPNSRVGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGIKEKDLAKVVQLS 360
           SHVAFLLSLGIPNSRVGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGIKEKDL KVVQLS
Sbjct: 301 SHVAFLLSLGIPNSRVGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGIKEKDLGKVVQLS 360

Query: 361 PQILVQRIDVSWNARYMFLSKEIGAPRDSVVKMVTKHPQLLHYSIDDGLLPRINFLRSIG 420
           PQILVQRIDVSWN RYMFLSKEIGAPRD+VVKMVTKHPQLLHYSIDDGLLPRINFLRSIG
Sbjct: 361 PQILVQRIDVSWNTRYMFLSKEIGAPRDNVVKMVTKHPQLLHYSIDDGLLPRINFLRSIG 420

Query: 421 MRNPEILKVSTSLTQVFSLSLEDNLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRP 480
           MRN EILKV TSLTQVFSLSLEDNLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRP
Sbjct: 421 MRNSEILKVITSLTQVFSLSLEDNLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRP 480

Query: 481 RHRFLVSLKKAPKGPFPLSSLVPTDECFCQQWAETSLDKYLEFRKRLLLKEFAQKYERR 524
           RHRFLVSLKKAPKGPFPLSS VPTDECFCQQWAETSLDKYLEFRKRLLLKEFAQKYERR
Sbjct: 481 RHRFLVSLKKAPKGPFPLSSFVPTDECFCQQWAETSLDKYLEFRKRLLLKEFAQKYERR 527

[Close]
BLAST of Sed0021870 vs. ExPASy TrEMBL
Match: A0A0A0K3I9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G154490 PE=3 SV=1)

HSP 1 Score: 800.4 bits (2066), Expect = 4.4e-228
Identity = 433/525 (82.48%), Postives = 464/525 (88.38%), Query Frame = 0 

Query: 1   MAFLNLFSFSPTFHLDDFPTSSDFFSAPSLACSFHGGGVCCRRRKRTVRRLVVRSTHSNA 60
           MA L+LFSFSPT H   FP+SSDF+       +   G    R R+R V R VVRSTHS+A
Sbjct: 1   MASLSLFSFSPTLH-SHFPSSSDFYLPSQFLLTSSFGS---RSRRRNVPRFVVRSTHSSA 60

Query: 61  RILKPKRRSRFGQTLSPFDSDEDEESVDDFSSDEDEDD--DDDGDISDVEYDDAKRKRTK 120
            ILKPKRRSRFG+TLSPFDSDED   VD+FSSD D+DD   D+GD SDVEY DAKRKR K
Sbjct: 61  AILKPKRRSRFGRTLSPFDSDEDGYDVDEFSSDGDDDDAWPDNGDFSDVEY-DAKRKRAK 120

Query: 121 LQSRAKKNHSQRENLRHAREIRGIRSFNDEKFFKVNANLHDFQDNTNDTEKQDFTFEEEV 180
           LQS+ + N+SQR+N+RH RE RGI+S ND K FKV +N  DFQD TNDT K DF  +EEV
Sbjct: 121 LQSKTRNNNSQRDNVRHPRESRGIKSSNDGKSFKVKSNHLDFQDITNDTVKHDFNIDEEV 180

Query: 181 RTTNIGRKGKLMSKKSMAARFPRLAEEMELDEKWFPLLDYLTTFGLKDSHFLQMYERHMP 240
            +TN GRKGK+M+KKSM  RFPRLAEE++LDEKWFPLL+YLTTFGLK+SHFLQMYERHMP
Sbjct: 181 CSTNTGRKGKVMTKKSMEIRFPRLAEEIDLDEKWFPLLNYLTTFGLKESHFLQMYERHMP 240

Query: 241 SLQINVCSAQERLEYLLSVGVKQRDVRRILLRQPQILQYTVENNLKSHVAFLLSLGIPNS 300
           SLQINV SAQERLEYLLSVGVKQRDVRRILLRQPQIL+YTVENNLKSHVAFLLSLGIP S
Sbjct: 241 SLQINVYSAQERLEYLLSVGVKQRDVRRILLRQPQILEYTVENNLKSHVAFLLSLGIPTS 300

Query: 301 RVGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGIKEKDLAKVVQLSPQILVQRIDVSWNA 360
           RVGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGI+EKDL KVVQLSPQILVQRID SWN 
Sbjct: 301 RVGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGIQEKDLGKVVQLSPQILVQRIDTSWNT 360

Query: 361 RYMFLSKEIGAPRDSVVKMVTKHPQLLHYSIDDGLLPRINFLRSIGMRNPEILKVSTSLT 420
           RYMFLSKEIGAPRD+VVKMVTKHPQLLHYSI+DGLLPRINFLRSIGMRN EILKV TSLT
Sbjct: 361 RYMFLSKEIGAPRDNVVKMVTKHPQLLHYSINDGLLPRINFLRSIGMRNSEILKVLTSLT 420

Query: 421 QVFSLSLEDNLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAPKG 480
           QVFSLSLEDNLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAPKG
Sbjct: 421 QVFSLSLEDNLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAPKG 480

Query: 481 PFPLSSLVPTDECFCQQWAETSLDKYLEFRKRLLLKEFAQKYERR 524
           PFPLSS VPTDECFC+QWAETSLDKYLEFRKRLLLKEFA+KYERR
Sbjct: 481 PFPLSSFVPTDECFCEQWAETSLDKYLEFRKRLLLKEFAEKYERR 520

[Close]
BLAST of Sed0021870 vs. ExPASy TrEMBL
Match: A0A6J1CG65 (transcription termination factor MTERF9, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111010507 PE=3 SV=1)

HSP 1 Score: 800.4 bits (2066), Expect = 4.4e-228
Identity = 438/525 (83.43%), Postives = 462/525 (88.00%), Query Frame = 0 

Query: 1   MAFLNLFSFSPTFHLDDFPTSSDFFSAPSLACSFHGGGVCCRRRKRTVRRLVVRSTHSNA 60
           MA L L SFSPT +  DFP+SSDF+ +     S        + R+R+VR  VVRSTHSNA
Sbjct: 1   MASLFLSSFSPTIY-SDFPSSSDFYLSAQFPLS--SSSSVSKFRRRSVRGFVVRSTHSNA 60

Query: 61  RILKPKRRSRFGQTLSPFDSDEDEE--SVDDFSSDEDEDDDDDGDISDVEYDDAKRKRTK 120
           R+LKPKRRSRFGQ LSPFD D D E   VDDFSSD    DDDDG+ SDVEY DAKRKR K
Sbjct: 61  RLLKPKRRSRFGQILSPFDCDGDGEDVDVDDFSSD---GDDDDGEFSDVEY-DAKRKRAK 120

Query: 121 LQSRAKKNHSQRENLRHAREIRGIRSFNDEKFFKVNANLHDFQDNTNDTEKQDFTFEEEV 180
           LQSR + N SQR+NLRH RE RGIRS N  K FKV A+  DFQD  NDT+KQDF+ EEEV
Sbjct: 121 LQSRTRNNGSQRDNLRHPRESRGIRSSNSGKSFKVKADHLDFQDLVNDTDKQDFSIEEEV 180

Query: 181 RTTNIGRKGKLMSKKSMAARFPRLAEEMELDEKWFPLLDYLTTFGLKDSHFLQMYERHMP 240
           R+T+I  KGKLM+KKSM  RFPRLAEE+ELD+KWFPLLDYLTTFGLK+SHFLQMYERHMP
Sbjct: 181 RSTSINGKGKLMTKKSMETRFPRLAEEIELDDKWFPLLDYLTTFGLKESHFLQMYERHMP 240

Query: 241 SLQINVCSAQERLEYLLSVGVKQRDVRRILLRQPQILQYTVENNLKSHVAFLLSLGIPNS 300
           SLQINV SAQERLEYLLSVGVKQRDVRR+LLRQPQIL+YTVENNLKSHVAFLLSLGIPNS
Sbjct: 241 SLQINVLSAQERLEYLLSVGVKQRDVRRMLLRQPQILEYTVENNLKSHVAFLLSLGIPNS 300

Query: 301 RVGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGIKEKDLAKVVQLSPQILVQRIDVSWNA 360
           RVGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGIKEKDL KVVQLSPQILVQRIDVSWN 
Sbjct: 301 RVGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGIKEKDLGKVVQLSPQILVQRIDVSWNT 360

Query: 361 RYMFLSKEIGAPRDSVVKMVTKHPQLLHYSIDDGLLPRINFLRSIGMRNPEILKVSTSLT 420
           RYMFLSKEIGAPRDSVVKMVTKHPQLLHYSIDDGLLPRINFLRSIGMRN EILKV TSLT
Sbjct: 361 RYMFLSKEIGAPRDSVVKMVTKHPQLLHYSIDDGLLPRINFLRSIGMRNSEILKVLTSLT 420

Query: 421 QVFSLSLEDNLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAPKG 480
           QV SLSLEDNLKPKY YLINELRNEV+SLTKYPMYLSLSLDQRIRPRHRFLVSLKKAPKG
Sbjct: 421 QVLSLSLEDNLKPKYKYLINELRNEVQSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAPKG 480

Query: 481 PFPLSSLVPTDECFCQQWAETSLDKYLEFRKRLLLKEFAQKYERR 524
           PFPLSSLVPTDECFCQQWAETSLDKYLEFR+RLLLKEFAQKYERR
Sbjct: 481 PFPLSSLVPTDECFCQQWAETSLDKYLEFRQRLLLKEFAQKYERR 518

[Close]
BLAST of Sed0021870 vs. TAIR 10
Match: AT5G55580.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 583.6 bits (1503), Expect = 1.6e-166
Identity = 326/527 (61.86%), Postives = 394/527 (74.76%), Query Frame = 0 

Query: 1   MAFLNLFSFSPTFHLDDFPTSSDFFSAPSLACSFHGGGVCCRRRKRTVRRLVVRSTHSNA 60
           MA  +L+ F     L   P+ S  F   S  CS        RR  R  R  VV   HSN 
Sbjct: 1   MAGFSLYCFKNPRILFTLPSESPLFVLGSDKCS-----PATRRPSRKTRGFVVTYAHSNP 60

Query: 61  RILKPKRRSRFGQTLSPFDSDEDEESVDDFSSDEDEDDDDD----GDISDVEYDDAKRKR 120
           +I+ PK++SR+GQTLSP+DSDED++       D+D+DDDDD     D ++V   + K+ +
Sbjct: 61  KIINPKKKSRYGQTLSPYDSDEDDD-------DDDDDDDDDWLLNDDFAEVTEYEKKKPK 120

Query: 121 TKLQSRAKKNHSQRENLRHAREIRGIRSFNDEKFFKVNANLHDFQDNTNDTEKQDFTFEE 180
           +  Q+ AKK  S ++ +     ++   S  DE             D+ +     + T E+
Sbjct: 121 SHKQTIAKK--SVKKGI-----VKPEESETDE-------------DDLDLGISPNATSEK 180

Query: 181 EVRTTNIGRKGKLMSKKSMAARFPRLAEEMELDEKWFPLLDYLTTFGLKDSHFLQMYERH 240
           +  +  +  +GK+ S+K +   +PRLAEE+++D K  PLLDYL+TFGLK+SHF+QMYERH
Sbjct: 181 KKESWRLDGRGKMSSRKYVEKLYPRLAEEIDIDPKCVPLLDYLSTFGLKESHFVQMYERH 240

Query: 241 MPSLQINVCSAQERLEYLLSVGVKQRDVRRILLRQPQILQYTVENNLKSHVAFLLSLGIP 300
           MPSLQINV SAQERL+YLLSVGVK RD++R+LLRQPQILQYTVENNLK+H++FL+ LGIP
Sbjct: 241 MPSLQINVFSAQERLDYLLSVGVKHRDIKRMLLRQPQILQYTVENNLKAHISFLMGLGIP 300

Query: 301 NSRVGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGIKEKDLAKVVQLSPQILVQRIDVSW 360
           NS++GQI+AA PSLFSYSVENSL+PT+RYL+EEVGIKE D+ KVVQLSPQILVQR+D++W
Sbjct: 301 NSKIGQIVAATPSLFSYSVENSLRPTIRYLIEEVGIKETDVGKVVQLSPQILVQRLDITW 360

Query: 361 NARYMFLSKEIGAPRDSVVKMVTKHPQLLHYSIDDGLLPRINFLRSIGMRNPEILKVSTS 420
           N RYMFLSKE+GAPRDSVVKMV KHPQLLHYSIDDG LPRINFLRSIGM N +ILKV TS
Sbjct: 361 NTRYMFLSKELGAPRDSVVKMVKKHPQLLHYSIDDGFLPRINFLRSIGMCNSDILKVLTS 420

Query: 421 LTQVFSLSLEDNLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAP 480
           LTQV SLSLEDNLKPKYMYL+NEL NEV  LTKYPMYLSLSLDQRIRPRHRFLV LKK  
Sbjct: 421 LTQVLSLSLEDNLKPKYMYLVNELNNEVHILTKYPMYLSLSLDQRIRPRHRFLVELKKVR 480

Query: 481 KGPFPLSSLVPTDECFCQQWAETSLDKYLEFRKRLLLKEFAQKYERR 524
           KGPFPLSSLVP DE FCQQWA TS+D YL FR+RLLLKEFA KY++R
Sbjct: 481 KGPFPLSSLVPNDESFCQQWAGTSVDTYLAFRQRLLLKEFANKYDKR 495

[Close]
BLAST of Sed0021870 vs. TAIR 10
Match: AT2G03050.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 104.8 bits (260), Expect = 2.2e-22
Identity = 64/223 (28.70%), Postives = 117/223 (52.47%), Query Frame = 0 

Query: 248 QERLEYLLSVGVKQRDVRRILLRQPQILQYTVENNLKSHVAFLLSLGIPNSRVGQIIAAA 307
           +E+L YL  + V   D  + L   P +    + +++ S    L S G+    VG+I+   
Sbjct: 33  REKLIYLQDLNV---DPHKALRVNPSLRSAPI-SSVVSVETLLSSTGLSRPAVGRILDMF 92

Query: 308 PSLFSYSVENSLKPTVRYLVEEVGIKEKDLAKVVQLSPQILVQRIDVSWNARYMFLSKEI 367
           P L +   E+ + P +R+L  E+ I E+D+ K +   P++L+  +D        FL    
Sbjct: 93  PDLLTSDPESEILPVLRFLSNEISISEQDIPKSISRCPRLLISSVDYQLRPALTFLKTLG 152

Query: 368 GAPRDSVVKMVTKHPQLLHYSIDDGLLPRINFL-RSIGMRNPEILKVSTSLTQVFSLSLE 427
              RD++    +++  LL  +++  L+P+I +L   +G    E+ K+      + + S++
Sbjct: 153 FVGRDTI---TSRNTVLLVSNVERTLIPKIEYLEEGLGFTREEVAKMVVRSPALLTYSVD 212

Query: 428 DNLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFL 470
           +NL PK  + I E+R +VK L ++P Y S SL+++I+PRHR L
Sbjct: 213 NNLVPKVEFFIEEMRGDVKELKRFPQYFSFSLERKIKPRHRLL 248

[Close]
BLAST of Sed0021870 vs. TAIR 10
Match: AT2G21710.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 103.6 bits (257), Expect = 4.9e-22
Identity = 60/223 (26.91%), Postives = 115/223 (51.57%), Query Frame = 0 

Query: 248 QERLEYLLSVGVKQRDVRRILLRQPQILQYTVENNLKSHVAFLLSLGIPNSRVGQIIAAA 307
           ++++ YL   G+   +V R+L  +P ++  ++E   K  V +   LGIP   + +I+   
Sbjct: 353 EKKINYLKEFGLSTEEVGRLLAYKPHLMGCSIEERWKPLVKYFYYLGIPKEGMKRILVVK 412

Query: 308 PSLFSYSVENSLKPTVRYLVEEVGIKEKDLAKVVQLSPQILVQRIDVSWNARYMFLSKEI 367
           P L+   +E ++ P VR+L +E+GI  + +  ++   P +L   +        +FL    
Sbjct: 413 PILYCIDLEKTIAPKVRFL-QEMGIPNEAIGNMLVKFPSLLTNSLYKKIRPVVIFLLTRA 472

Query: 368 GAPRDSVVKMVTKHPQLLHYSIDDGLLPRINFLRSIGMRNPEILKVSTSLTQVFSLSLED 427
           G  +  + K++   P LL  SI   L P + +  S+G+R  ++ ++      +   ++ D
Sbjct: 473 GVTQKDIGKVIAMDPALLGCSIGTKLEPNMRYYISLGIRFYQLGEMIADFPMLLRYNV-D 532

Query: 428 NLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFLV 471
           NL+PKY YL   +   ++ L ++P + S SL++RI PRH  +V
Sbjct: 533 NLRPKYRYLRRTMIRPLQDLIEFPRFFSYSLERRIIPRHTIMV 573

[Close]
BLAST of Sed0021870 vs. TAIR 10
Match: AT2G34620.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 100.9 bits (250), Expect = 3.2e-21
Identity = 60/214 (28.04%), Postives = 118/214 (55.14%), Query Frame = 0 

Query: 281 NNLKSHVAFLLSLGIPNSRVGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGIKEKDLAKV 340
           ++++S + FL S GI  + + +I+   P + +  V   L P   +L  ++ + E    +V
Sbjct: 85  DSIQSVLHFLQSKGIYPNDLPRILGMCPKILTSDVRTELYPVFMFLSNDLHVPENAFRRV 144

Query: 341 VQLSPQILVQRIDVSWNARYMFLSKEIGAPRDSVVKMVTKHPQLLHYSIDDGLLPRINFL 400
           ++  P++L+  ++        +L + +G     +  +  + P LL  S++  L+P++ FL
Sbjct: 145 IKKCPRLLISSVEDQLKPALFYLQR-LGL--KDLEALAYQDPILLVSSVEHTLIPKLRFL 204

Query: 401 RSIGMRNPEILKVSTSLTQVFSLSLEDNLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQ 460
            SIG   PE + +      +F+ S+E+N KPK  Y ++E++ ++++L ++P Y + SL++
Sbjct: 205 ESIGFSRPEAIGMILRCPALFTFSIENNFKPKLDYFMSEIKGKLENLKEFPQYFAFSLEK 264

Query: 461 RIRPRHRFLVSLKKAPKGPFPLSSLVPTDECFCQ 495
           RI+PRH  L S+++  + P  L  L  TDE F Q
Sbjct: 265 RIKPRH--LESMERGLELPLSL-MLKSTDEEFEQ 292

[Close]
BLAST of Sed0021870 vs. TAIR 10
Match: AT4G38160.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 99.0 bits (245), Expect = 1.2e-20
Identity = 63/211 (29.86%), Postives = 113/211 (53.55%), Query Frame = 0 

Query: 195 MAARFPRLAEEMELDEKWFPLLDYLTTFGLKDSHFLQMYERHMPSLQINVCSAQERLEYL 254
           + +R P++   + LDE+  P+++ L++ G           +  P L  +V   +E+L  L
Sbjct: 62  IVSRCPKIL-TLRLDERLIPMVECLSSLGRNPREVASAITKFPPILSHSV---EEKLCPL 121

Query: 255 L----SVGVKQRDVRRILLRQPQILQYTVENNLKSHVAFLLSLGI-PNSRVGQIIAAAPS 314
           L    ++GV +  + +++L  P+++ Y+++  L   V+FL SLG+  +  +G+++   P 
Sbjct: 122 LAFFQALGVPETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLVKNPF 181

Query: 315 LFSYSVENSLKPTVRYLVEEVGIKEKDLAKVVQLSPQILVQRIDVSWNARYMFLSKEIGA 374
           L  YSV+  L+PT  +L   VG+ E  +  VV   PQ+L + ++      Y +L KE G 
Sbjct: 182 LMGYSVDKRLRPTTEFLKSSVGLSEDGIKSVVMNFPQLLCRDVNKILKPNYDYL-KECGF 241

Query: 375 PRDSVVKMVTKHPQLLHYSIDDGLLPRINFL 401
               +  MVT +PQ+L  S+ + L PRI FL
Sbjct: 242 GDSQIATMVTGYPQILIKSVKNSLQPRIRFL 267

The following BLAST results are available for this feature:
BLAST of Sed0021870 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038897631.11.1e-24185.53transcription termination factor MTERF9, chloroplastic isoform X1 [Benincasa his... [more]
XP_038897632.11.6e-23784.77transcription termination factor MTERF9, chloroplastic isoform X2 [Benincasa his... [more]
XP_008462974.13.9e-23182.18PREDICTED: transcription termination factor MTERF9, chloroplastic [Cucumis melo][more]
XP_022976275.11.3e-22981.56transcription termination factor MTERF9, chloroplastic [Cucurbita maxima][more]
XP_022936628.12.2e-22981.26transcription termination factor MTERF9, chloroplastic [Cucurbita moschata][more]
BLAST of Sed0021870 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FM802.3e-16561.86Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana O... [more]
Q84X533.1e-2128.70Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX... [more]
F4IHL36.9e-2126.91Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana O... [more]
Q6AUK65.9e-2022.71Transcription termination factor MTERF4, chloroplastic OS=Oryza sativa subsp. ja... [more]
Q9SZL61.7e-1929.86Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidop... [more]
BLAST of Sed0021870 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3CI381.9e-23182.18transcription termination factor MTERF9, chloroplastic OS=Cucumis melo OX=3656 G... [more]
A0A6J1IJ036.1e-23081.56transcription termination factor MTERF9, chloroplastic OS=Cucurbita maxima OX=36... [more]
A0A6J1FDR71.0e-22981.26transcription termination factor MTERF9, chloroplastic OS=Cucurbita moschata OX=... [more]
A0A0A0K3I94.4e-22882.48Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G154490 PE=3 SV=1[more]
A0A6J1CG654.4e-22883.43transcription termination factor MTERF9, chloroplastic OS=Momordica charantia OX... [more]
BLAST of Sed0021870 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G55580.11.6e-16661.86Mitochondrial transcription termination factor family protein [more]
AT2G03050.12.2e-2228.70Mitochondrial transcription termination factor family protein [more]
AT2G21710.14.9e-2226.91Mitochondrial transcription termination factor family protein [more]
AT2G34620.13.2e-2128.04Mitochondrial transcription termination factor family protein [more]
AT4G38160.11.2e-2029.86Mitochondrial transcription termination factor family protein [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003690Transcription termination factor, mitochondrial/chloroplasticSMARTSM00733mt_12coord: 399..430
e-value: 1.1E-6
score: 38.3
coord: 362..394
e-value: 83.0
score: 12.0
coord: 289..320
e-value: 4.2E-5
score: 33.0
coord: 325..357
e-value: 3.5E-5
score: 33.2
coord: 435..467
e-value: 1.4
score: 17.9
coord: 468..499
e-value: 8.6E-4
score: 28.6
IPR003690Transcription termination factor, mitochondrial/chloroplasticPFAMPF02536mTERFcoord: 220..498
e-value: 3.0E-42
score: 144.7
IPR003690Transcription termination factor, mitochondrial/chloroplasticPANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 42..540
IPR038538MTERF superfamily, mitochondrial/chloroplasticGENE3D1.25.70.10Transcription termination factor 3, mitochondrialcoord: 299..535
e-value: 7.4E-54
score: 184.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 78..106
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 72..123
NoneNo IPR availablePANTHERPTHR13068:SF151TRANSCRIPTION TERMINATION FACTOR MTERF9, CHLOROPLASTICcoord: 42..540

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0021870.1Sed0021870.1mRNA
Sed0021870.2Sed0021870.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0032502 developmental process
biological_process GO:0006353 DNA-templated transcription, termination
biological_process GO:0006355 regulation of transcription, DNA-templated
molecular_function GO:0003690 double-stranded DNA binding