Sed0021860 (gene) Chayote v1

Overview


Name	Sed0021860
Type	gene
Organism	Sechium edule (Chayote v1)
Description	suppressor protein SRP40 isoform X1
Location	LG12: 30965976 .. 30968666 (+)
RNA-Seq Expression	Sed0021860
Synteny	Sed0021860

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGTCTTTAGATCGATTTCCCCTGTATTATGCGATTGCGTTGCGATTTGTAGATTCGGATTGTGCGTTTGTTAGATTTTGTTTTTTTGCTTAAGGATTTAGAATCGTGATTTGAAATTCGCACGCGATTGATAAAAGGAGCAATTAGGGATTTTAAATTGTTTGATATTGGGAGATTTGAGGTTGTTAGGGTTTAGTCGATGGAAGAGTAAATGATAGCAAGGCTGTTGAATTGAAGCAATGCGGTATCTGGATTTCGGAGTTTTAATAGGCCGATGATGAGGCAAAAAATGCAATGTTTCATCCTGTGATTTTAGATCGGTTTTCCATGTTTTTTGTGATTGTGTTCGCGTTGCGCGAATTTGAAATTGCATACGATTTGAAAAGGGGAGAAATCTAGAAATTGTAAATTATTGAAATATTAGGCCATTTGATGAGGCAAAAAGATGCATTGTTCGTTCGGAGGTTGTGGATATCGTTCATTTTGCAGCAATACATGTGCATTTTGTAATAGAACACATTGGGAATGGAAAATTATGTGTTTGAGACTCAAAAATTGAAATCACATGATTTAGGGTTATAGGCATTGCACCCTCTGTTCTTCAAAGATAGAACATGGGTCGGGGATTAAATTTGGATGGTAAAGGAAGCTTTTGGTTGTCACATTTTCTATTTTTGTTTAACGCAATACGATTGATTGTTCGTCCCCAATACGGAGCTAGTGGCGTGATCCATTTCTTATTTGATATTCTCTTATAGTTGTGTGATTGAAGCCTAGAACCATTTATAATCAGTGCTGAAGGGTTTGCATGTATTGATTTGCTTAACCCCATTTCATTTTCTTTCATCTTACAGACGGTAATCTTTCCTACATCGGACTCGAAAACTGACGAGTGATGCCTTGAGAGGCTGTGGAATTTGGGAAAAAGACTGAGGCTAGTGAATCAAACACACATCATAGCAAAAAGTTATGCTCCTTTGAATTGGTGGTAAATGAGCCTGGTCAGTCCATTGGTGGTATCATCGACTCTTTGAAAAGGAATAAGTTGCATGTTGCAGGACACTCGGATTCTGAATTTGAGTTTATTAGTGGTGGTGATACTGAAACTCGTCCTCCTATGGGCGATCTTTCCGGCACAGCAGAGATATCGAGCTGCTTATTACCACATTCATCATCACCTGCATCTTAATTTTCCCTGCACAAGTATGTGATTGAACTCCCAAAGCCTGCAAAGGACAAAGATTCAGTGTCTATGGAGACAGATCTAAATAAAACTTTACCGAACCCCAAACACGGTGAGGCTGACAATATTGTAAGTCAATTTTTTTTTGTAAACTTGTTCTTTCACCTCATTGTTCTCAAAATCAAAATCTGAACATAAATTTAAACTTCAACAGGGTGGACATGCTTCGGGTAACGATCCCAACTCTCCGAGCATGGAGAGGGACAACAGGTTGGGTAGCAATGGGCAATCACCAGTAACTCTGATGCATCGGACAGACTCGGGCTTGGGCCACGATGCCGCAACTCAATATCCTCCAACTCAAATGATGGAGAGAGCCGATGATCCTACTTCCCCAGCATATAGATTTCCATCTCATGTCTTTGCGAGAACTAAATCTACTACGGACTGGAGTGCGGCTTCAAATGAGTCGTTGTTCAGCATTCAGATGGGAAACATGAGTTTTACCAGAGAACAAATGGCTTGGCTGGGAAAATCGGGTGAGCTATGTAGGCCTGGTGAATCAGCCATTGACTTATCCCAGCCTCCGAATATGAACCAATCTGATTCTGCATTGAAAGGCACTCATCCAGATGGCGATATGACAGAAATCGAAGCACGAGCTGCAGAAACAATGAGGGAGGTTATAAGGGAACATTCAGAAAACCAACGCAAGGAGACTTCAACTCTAACAGAGTCGTCGTCTCAGTCAGGCGTTTCTCATAAGTCAGAAAGCAGCACAAAGTCTTTTAACTTTCCAATGTAAGTCACTACATTCTCAAATCCTTATCAACTGAAATAGCTTTGATTTTTATGTTTTTCTAAGAAAAGTATACTTTAGTTGGCATCTTTAAACATTGAGGATGTAAATGGAGAAGAGAAGCTAAGTGTAAGTTACCAGAGTTAACTGAATGATGTATTAGAAGAATGCTCGCTCATGTTGCCAAGGGGTAGACTCGTTAGTAGAGGCTTTGGGATCTCCAAGGCATGTTCTTTTAGAAGCCTCATGTTTGAAATCCACAAGTGAATTTAATTGCAAAATTCATTTGTTGTCTCTTGAGTCTGGGCCTCGGGGATGGGCGTGGGTTCCCTAGATATATAGTGGGGTAAAGTTTCGATTCCTGGTTATAAAAAAGACAGAATAGATGAATCCTCGTCATTTTCACTTTTAGCACACTTACTCTATATGAATTAAAACATTTGATGGCAGTTGCGCAGATCAATAAACATATGAATGTTTTCTTTGTCAAACTTTAAGATTGGCAGGAGACGGAGGAAAAACCGTTTCTTTGAAGCGAGGAGAATCCCAGAAGGCAAAGCAAGAGATGAAGTCAGAATCACCACATGAAGCTTCAGATCCACAAACCCCCAAAGAATCAAGCTCAGATGAACCTCCAAAAGCAGCTGCAAATGTTGGTCAAAAGAAATGGTTTTCTCGCTTTTCTTGTTGCCCGCTTCGTAGTTGA

mRNA sequence

ATGTCGTCTTTAGATCGATTTCCCCTGTATTATGCGATTGCGTTGCGATTTGCTGTTGAATTGAAGCAATGCGGTATCTGGATTTCGGATGAATCAAACACACATCATAGCAAAAAGTTATGCTCCTTTGAATTGGTGGTAAATGAGCCTGGTCAGTCCATTGGTGGTATCATCGACTCTTTGAAAAGGAATAAGTTGCATGTTGCAGGACACTCGGATTCTGAATTTGAGTTTATTAGTGGTGGTGATACTGAAACTCGTCCTCCTATGGGCGATCTTTCCGGCACAGCAGAGATATCGAGCTGCTTATTACCACATTCATCATCACCTCCTGCAAAGGACAAAGATTCAGTGTCTATGGAGACAGATCTAAATAAAACTTTACCGAACCCCAAACACGGTGAGGCTGACAATATTGTAAGTCAATTTTTTTTTGGTGGACATGCTTCGGGTAACGATCCCAACTCTCCGAGCATGGAGAGGGACAACAGGTTGGGTAGCAATGGGCAATCACCAGTAACTCTGATGCATCGGACAGACTCGGGCTTGGGCCACGATGCCGCAACTCAATATCCTCCAACTCAAATGATGGAGAGAGCCGATGATCCTACTTCCCCAGCATATAGATTTCCATCTCATGTCTTTGCGAGAACTAAATCTACTACGGACTGGAGTGCGGCTTCAAATGAGTCGTTGTTCAGCATTCAGATGGGAAACATGAGTTTTACCAGAGAACAAATGGCTTGGCTGGGAAAATCGGGTGAGCTATGTAGGCCTGGTGAATCAGCCATTGACTTATCCCAGCCTCCGAATATGAACCAATCTGATTCTGCATTGAAAGGCACTCATCCAGATGGCGATATGACAGAAATCGAAGCACGAGCTGCAGAAACAATGAGGGAGGTTATAAGGGAACATTCAGAAAACCAACGCAAGGAGACTTCAACTCTAACAGAGTCGTCGTCTCAGTCAGGCGTTTCTCATAAGTCAGAAAGCAGCACAAAGTCTTTTAACTTTCCAATATTGGCAGGAGACGGAGGAAAAACCGTTTCTTTGAAGCGAGGAGAATCCCAGAAGGCAAAGCAAGAGATGAAGTCAGAATCACCACATGAAGCTTCAGATCCACAAACCCCCAAAGAATCAAGCTCAGATGAACCTCCAAAAGCAGCTGCAAATGTTGGTCAAAAGAAATGGTTTTCTCGCTTTTCTTGTTGCCCGCTTCGTAGTTGA

Coding sequence (CDS)

ATGTCGTCTTTAGATCGATTTCCCCTGTATTATGCGATTGCGTTGCGATTTGCTGTTGAATTGAAGCAATGCGGTATCTGGATTTCGGATGAATCAAACACACATCATAGCAAAAAGTTATGCTCCTTTGAATTGGTGGTAAATGAGCCTGGTCAGTCCATTGGTGGTATCATCGACTCTTTGAAAAGGAATAAGTTGCATGTTGCAGGACACTCGGATTCTGAATTTGAGTTTATTAGTGGTGGTGATACTGAAACTCGTCCTCCTATGGGCGATCTTTCCGGCACAGCAGAGATATCGAGCTGCTTATTACCACATTCATCATCACCTCCTGCAAAGGACAAAGATTCAGTGTCTATGGAGACAGATCTAAATAAAACTTTACCGAACCCCAAACACGGTGAGGCTGACAATATTGTAAGTCAATTTTTTTTTGGTGGACATGCTTCGGGTAACGATCCCAACTCTCCGAGCATGGAGAGGGACAACAGGTTGGGTAGCAATGGGCAATCACCAGTAACTCTGATGCATCGGACAGACTCGGGCTTGGGCCACGATGCCGCAACTCAATATCCTCCAACTCAAATGATGGAGAGAGCCGATGATCCTACTTCCCCAGCATATAGATTTCCATCTCATGTCTTTGCGAGAACTAAATCTACTACGGACTGGAGTGCGGCTTCAAATGAGTCGTTGTTCAGCATTCAGATGGGAAACATGAGTTTTACCAGAGAACAAATGGCTTGGCTGGGAAAATCGGGTGAGCTATGTAGGCCTGGTGAATCAGCCATTGACTTATCCCAGCCTCCGAATATGAACCAATCTGATTCTGCATTGAAAGGCACTCATCCAGATGGCGATATGACAGAAATCGAAGCACGAGCTGCAGAAACAATGAGGGAGGTTATAAGGGAACATTCAGAAAACCAACGCAAGGAGACTTCAACTCTAACAGAGTCGTCGTCTCAGTCAGGCGTTTCTCATAAGTCAGAAAGCAGCACAAAGTCTTTTAACTTTCCAATATTGGCAGGAGACGGAGGAAAAACCGTTTCTTTGAAGCGAGGAGAATCCCAGAAGGCAAAGCAAGAGATGAAGTCAGAATCACCACATGAAGCTTCAGATCCACAAACCCCCAAAGAATCAAGCTCAGATGAACCTCCAAAAGCAGCTGCAAATGTTGGTCAAAAGAAATGGTTTTCTCGCTTTTCTTGTTGCCCGCTTCGTAGTTGA

Protein sequence

MSSLDRFPLYYAIALRFAVELKQCGIWISDESNTHHSKKLCSFELVVNEPGQSIGGIIDSLKRNKLHVAGHSDSEFEFISGGDTETRPPMGDLSGTAEISSCLLPHSSSPPAKDKDSVSMETDLNKTLPNPKHGEADNIVSQFFFGGHASGNDPNSPSMERDNRLGSNGQSPVTLMHRTDSGLGHDAATQYPPTQMMERADDPTSPAYRFPSHVFARTKSTTDWSAASNESLFSIQMGNMSFTREQMAWLGKSGELCRPGESAIDLSQPPNMNQSDSALKGTHPDGDMTEIEARAAETMREVIREHSENQRKETSTLTESSSQSGVSHKSESSTKSFNFPILAGDGGKTVSLKRGESQKAKQEMKSESPHEASDPQTPKESSSDEPPKAAANVGQKKWFSRFSCCPLRS

Homology

[Close]

BLAST of Sed0021860 vs. NCBI nr
Match: XP_038880274.1 (uncharacterized serine-rich protein C215.13 [Benincasa hispida])

HSP 1 Score: 389.4 bits (999), Expect = 3.8e-104
Identity = 237/442 (53.62%), Postives = 279/442 (63.12%), Query Frame = 0


Query: 28  ISDESNTHHSKKLCSFELVVNEPGQSIGGIIDSLKRNKLHVAGHSDSEFEFISGGDTETR 87
           +S  S+   S    SFEL+V      I G  DSLK+++ HVAGH+DSEFEFIS  D ET 
Sbjct: 33  VSSLSSASDSSSDSSFELIVTGSSGFIDGTSDSLKKDECHVAGHTDSEFEFISSDDIETH 92

Query: 88  PPMGDLSGTAEISSCLLPHSSS---------------PPAKDKDSVSMETDLNKTLPNPK 147
           PP  DL   A+ SS  L  SSS                P K KD+ +ME   NKTL  P+
Sbjct: 93  PPRADLPRAAKRSSRSLSRSSSSASESSLHDHVIELPKPGKYKDTNAMEPHSNKTLRGPE 152

Query: 148 HGEADNIVS------------------------QFFFGGHASGN----DPNSPSMERDNR 207
            GE  ++ S                        +   GG  +GN    + +SPS E+DNR
Sbjct: 153 PGETSHVESRKNLQTCSSTSSSSSSESESERKIKLQKGGDTAGNLLVKNSSSPSKEKDNR 212

Query: 208 LGS--------------NGQSPVTLMHRTDSGLGHDAATQYPPTQMMERADDPTSPAYRF 267
           L +              NGQS VT  HR DS  G +  TQYPPTQ+MERADDPTSPAYR 
Sbjct: 213 LVADLSDDDIPISSMTCNGQSAVTPTHRIDSSSGSETPTQYPPTQVMERADDPTSPAYRI 272

Query: 268 PSHVFARTKSTT--DWSAASNESLFSIQMGNMSFTREQMAWLGKSGELCRPGESAIDLSQ 327
           PS VF+RTKST   +WS ASNESLFSIQMGNMSFTREQ+ WLGKSGELCRPGESA+D+SQ
Sbjct: 273 PSRVFSRTKSTAPMEWSVASNESLFSIQMGNMSFTREQLCWLGKSGELCRPGESALDVSQ 332

Query: 328 PPNMNQSDSALKGTHPDGDMTEIEARAAETMREVIREHSENQRKETSTLTESSSQS-GVS 387
              M  SD  LK + PDGD+   EARAAETMREVIRE+ ENQRKE+STLTESSSQS  +S
Sbjct: 333 HLAMKPSDCGLKNSRPDGDIAATEARAAETMREVIRENCENQRKESSTLTESSSQSASIS 392

Query: 388 HKSESSTKSFNFPILAGDGGKTVSLKRGESQKAKQEMKSESPHEASDPQTPKESSSDEPP 410
           H+S+ STKSF FPIL G+GGK++S K  + +K     K +SPH +S+PQTPKESSSD  P
Sbjct: 393 HQSDGSTKSFQFPILTGEGGKSISFKGADPEKG----KPQSPHPSSNPQTPKESSSDGSP 452

[Close]

BLAST of Sed0021860 vs. NCBI nr
Match: XP_011648451.1 (uncharacterized protein LOC105434465 [Cucumis sativus] >KGN63731.1 hypothetical protein Csa_013801 [Cucumis sativus])

HSP 1 Score: 384.4 bits (986), Expect = 1.2e-102
Identity = 234/426 (54.93%), Postives = 274/426 (64.32%), Query Frame = 0


Query: 29  SDESNTHHSKKLCSFELVVNEPGQSIGGIIDSLKRNKLHVAGHSDSEFEFISGGDTETRP 88
           S  S+   S    SFEL+V     SIG   DSLK+++LHV G SDS F FI+  D  T  
Sbjct: 34  SSLSSASDSSSDSSFELIVTGLDGSIGVASDSLKKDELHVVGRSDSGFVFITSDDVGTHS 93

Query: 89  PMGDLSGTAEISSCLLPHSSSPPAKDK--DSV-----SMETDLNKTLPNPKHGEADNIVS 148
           P  DL GTA+I S  L  SSS  ++    D V      +E D  K LP  KHGE +N+ S
Sbjct: 94  PKTDLPGTAKIPSQSLSRSSSSSSESSLHDHVIELPKPVEPDSKKRLPGLKHGETNNVES 153

Query: 149 QFFFGGHAS-------------------------GNDPNSPSMERDNRL----------G 208
           +      +S                           +P+SPS+ +DNRL           
Sbjct: 154 RKSIQTCSSTSSSSSSESESKHKLQKGRDVDNLLSKNPSSPSVVKDNRLVTDFSDDDVPT 213

Query: 209 SNGQSPVTLMHRTDSGLGHDAATQYPPTQMMERADDPTSPAYRFPSHVFARTKSTT--DW 268
           SNGQS VT  HR DS  G +  TQYP TQMM+R +DPTSPAYR PS VF+RTKST   +W
Sbjct: 214 SNGQSAVTPTHRVDSSSGCETPTQYPQTQMMDRVEDPTSPAYRIPSRVFSRTKSTAPMEW 273

Query: 269 SAASNESLFSIQMGNMSFTREQMAWLGKSGELCRPGESAIDLSQPPNMNQSDSALKGTHP 328
           S ASNESLFSIQMGNMSFTREQ+ WLGKSGELCRPGES ID+SQ   M  SD  LK   P
Sbjct: 274 SVASNESLFSIQMGNMSFTREQLCWLGKSGELCRPGESTIDMSQHLAMKTSDCGLKSKSP 333

Query: 329 DGDMTEIEARAAETMREVIREHSENQRKETSTLTESSSQS-GVSHKSESSTKSFNFPILA 388
           +GD++  EARAAETMREVIRE+SENQRKE+STLTESSSQS  +SH+SE STKSF FPIL 
Sbjct: 334 NGDLSATEARAAETMREVIRENSENQRKESSTLTESSSQSASISHQSEGSTKSFQFPILT 393

Query: 389 GDGGKTVSLKRGESQKAKQEMKSESPHEASDPQTPKESSSDEPPKAAANVGQKKWFSRFS 410
           G+GGK++SLK G+ +KAKQE K ESP   S+PQTPKE +SDE PKA  N GQK+WFS FS
Sbjct: 394 GEGGKSISLKGGDLEKAKQEGKPESPETPSNPQTPKEKNSDESPKATTNTGQKRWFSCFS 453

[Close]

BLAST of Sed0021860 vs. NCBI nr
Match: KAA0057996.1 (putative serine-rich protein C215.13-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 377.5 bits (968), Expect = 1.5e-100
Identity = 237/437 (54.23%), Postives = 276/437 (63.16%), Query Frame = 0


Query: 29  SDESNTHHSKKLCSFELVVNEPGQSIGGIIDSLKRNKLHVAGHSDSEFEFISGGDTETRP 88
           S  S+   S    SFEL+V     SIG   DSL++++LH  G SDSEF FIS  D  T  
Sbjct: 116 SSSSSASDSSSESSFELIVTGLDGSIGVTSDSLEKDELHAVG-SDSEFVFISSDDVGTHS 175

Query: 89  PMGDLSGTAEISSCLLPHSSS---------------PPAKDKDSVSMETDLNKTLPNPKH 148
           PM D   TA+I S  L  SSS                P K +D+  ME DL KT    +H
Sbjct: 176 PMADPPCTAKIPSQSLSRSSSSASESSLHGHVIELPKPEKYEDTNGMEPDLKKTPSGLEH 235

Query: 149 GEADNIVS----------------------QFFFGGHASGN----DPNSPSMERDNRL-- 208
           GE +N+ S                      +   GG  + N    +P+SPS+E+DNRL  
Sbjct: 236 GETNNVESRKSIQTCSSTSSSSSSESESKPELQKGGDVADNLLSKNPSSPSVEKDNRLVT 295

Query: 209 --------GSNGQSPVTLMHRTDSGLGHDAATQYPPTQMMERADDPTSPAYRFPSHVFAR 268
                    SN QS  T  HR DS  G +  TQYPPTQMM+R DDPTSPAYR PS VF+R
Sbjct: 296 DFSDDDVPVSNEQSAATPTHRVDSSSGSETPTQYPPTQMMDRVDDPTSPAYRIPSRVFSR 355

Query: 269 TKSTT--DWSAASNESLFSIQMGNMSFTREQMAWLGKSGELCRPGESAIDLSQPPNMNQS 328
           TKST   +WS ASNESLFSIQMGNMSFTREQ+ WLGKSGELCRPGES ID+SQ   M  S
Sbjct: 356 TKSTAPMEWSVASNESLFSIQMGNMSFTREQLCWLGKSGELCRPGESTIDMSQHLAMKTS 415

Query: 329 DSALKGTHPDGDMTEIEARAAETMREVIREHSENQRKETSTLTESSSQS-GVSHKSESST 388
           D  LK   P+GD+   EARAAETMREVIRE+SENQRKE+STLTESSSQS  +SH+SE ST
Sbjct: 416 DCGLKSKSPNGDLAATEARAAETMREVIRENSENQRKESSTLTESSSQSASISHQSEGST 475

Query: 389 KSFNFPILAGDGGKTVSLKRGESQKAKQEMKSESPHEASDPQTPKESS-SDEPPKAAA-N 410
           KSF FPIL G+GGK++SLK G+ +KAKQE K ESP   S+PQTPKE++ SDE PKA   N
Sbjct: 476 KSFQFPILTGEGGKSISLKGGDPEKAKQEGKPESPEAPSNPQTPKETTKSDESPKATTNN 535

[Close]

BLAST of Sed0021860 vs. NCBI nr
Match: XP_008453279.1 (PREDICTED: uncharacterized protein LOC103494046 [Cucumis melo])

HSP 1 Score: 377.5 bits (968), Expect = 1.5e-100
Identity = 237/437 (54.23%), Postives = 276/437 (63.16%), Query Frame = 0


Query: 29  SDESNTHHSKKLCSFELVVNEPGQSIGGIIDSLKRNKLHVAGHSDSEFEFISGGDTETRP 88
           S  S+   S    SFEL+V     SIG   DSL++++LH  G SDSEF FIS  D  T  
Sbjct: 34  SSSSSASDSSSESSFELIVTGLDGSIGVTSDSLEKDELHAVG-SDSEFVFISSDDVGTHS 93

Query: 89  PMGDLSGTAEISSCLLPHSSS---------------PPAKDKDSVSMETDLNKTLPNPKH 148
           PM D   TA+I S  L  SSS                P K +D+  ME DL KT    +H
Sbjct: 94  PMADPPCTAKIPSQSLSRSSSSASESSLHGHVIELPKPEKYEDTNGMEPDLKKTPSGLEH 153

Query: 149 GEADNIVS----------------------QFFFGGHASGN----DPNSPSMERDNRL-- 208
           GE +N+ S                      +   GG  + N    +P+SPS+E+DNRL  
Sbjct: 154 GETNNVESRKSIQTCSSTSSSSSSESESKPELQKGGDVADNLLSKNPSSPSVEKDNRLVT 213

Query: 209 --------GSNGQSPVTLMHRTDSGLGHDAATQYPPTQMMERADDPTSPAYRFPSHVFAR 268
                    SN QS  T  HR DS  G +  TQYPPTQMM+R DDPTSPAYR PS VF+R
Sbjct: 214 DFSDDDVPVSNEQSAATPTHRVDSSSGSETPTQYPPTQMMDRVDDPTSPAYRIPSRVFSR 273

Query: 269 TKSTT--DWSAASNESLFSIQMGNMSFTREQMAWLGKSGELCRPGESAIDLSQPPNMNQS 328
           TKST   +WS ASNESLFSIQMGNMSFTREQ+ WLGKSGELCRPGES ID+SQ   M  S
Sbjct: 274 TKSTAPMEWSVASNESLFSIQMGNMSFTREQLCWLGKSGELCRPGESTIDMSQHLAMKTS 333

Query: 329 DSALKGTHPDGDMTEIEARAAETMREVIREHSENQRKETSTLTESSSQS-GVSHKSESST 388
           D  LK   P+GD+   EARAAETMREVIRE+SENQRKE+STLTESSSQS  +SH+SE ST
Sbjct: 334 DCGLKSKSPNGDLAATEARAAETMREVIRENSENQRKESSTLTESSSQSASISHQSEGST 393

Query: 389 KSFNFPILAGDGGKTVSLKRGESQKAKQEMKSESPHEASDPQTPKESS-SDEPPKAAA-N 410
           KSF FPIL G+GGK++SLK G+ +KAKQE K ESP   S+PQTPKE++ SDE PKA   N
Sbjct: 394 KSFQFPILTGEGGKSISLKGGDPEKAKQEGKPESPEAPSNPQTPKETTKSDESPKATTNN 453

[Close]

BLAST of Sed0021860 vs. NCBI nr
Match: XP_022135339.1 (suppressor protein SRP40 isoform X1 [Momordica charantia] >XP_022135340.1 suppressor protein SRP40 isoform X1 [Momordica charantia] >XP_022135341.1 suppressor protein SRP40 isoform X1 [Momordica charantia] >XP_022135342.1 suppressor protein SRP40 isoform X1 [Momordica charantia] >XP_022135343.1 suppressor protein SRP40 isoform X1 [Momordica charantia] >XP_022135344.1 suppressor protein SRP40 isoform X1 [Momordica charantia] >XP_022135345.1 suppressor protein SRP40 isoform X1 [Momordica charantia] >XP_022135346.1 suppressor protein SRP40 isoform X1 [Momordica charantia] >XP_022135347.1 suppressor protein SRP40 isoform X1 [Momordica charantia] >XP_022135349.1 suppressor protein SRP40 isoform X1 [Momordica charantia] >XP_022135350.1 suppressor protein SRP40 isoform X1 [Momordica charantia])

HSP 1 Score: 362.8 bits (930), Expect = 3.8e-96
Identity = 228/428 (53.27%), Postives = 274/428 (64.02%), Query Frame = 0


Query: 28  ISDESNTHHSKKLCSFELVVNEPGQSIGGIIDSLKRNKLHVAGHSDSEFEFISGGDTETR 87
           +S  S+   S    SFEL++N+  +  GG  D LK  +L+VAGHS+SEFEFIS  D ETR
Sbjct: 33  VSSLSSASDSSSDSSFELILNDSSEFPGGTSDPLKTKELNVAGHSESEFEFISSDDIETR 92

Query: 88  PPMGDLSGTAEISSCLLPHSSS-----------------PPAKDKDSVSMETDLNKTLPN 147
               +L   A+ SS  L  SSS                  P K+KDS  ME DL+K+L  
Sbjct: 93  -SAANLPSAAKTSSRSLSRSSSSSSASESSLCDHVIELPKPEKNKDSKVMEADLSKSLQT 152

Query: 148 PKHGEADNIVSQ----FFFGGHASGNDPNSPSMERDNRL--------------GSNGQSP 207
                + +  S+             N+P+SPSM++DNRL               SNGQSP
Sbjct: 153 SSSSSSSSSESEAKRKIKLQQGGVSNNPSSPSMDKDNRLVEDFSDDDVPISSMASNGQSP 212

Query: 208 VTLMHRTDSGLGHDAATQYPPTQMMERADDPTSPAYRFPSHVFARTKSTT--DWSAASNE 267
               +R D   G +AATQYP TQ+MER DDP SP+YR PSHVF+RTKS +  +WS ASNE
Sbjct: 213 AAPTNRIDLSAGSEAATQYPQTQLMERVDDPNSPSYRIPSHVFSRTKSKSAMEWSVASNE 272

Query: 268 SLFSIQMGNMSFTREQMAWLGKSGELCRPGESA----IDL---SQPPNMNQSDSALKGTH 327
           SLFSI MGNMSFTREQ+ WLGKSGEL RPGE+A    IDL    QP  +  SD  LKGTH
Sbjct: 273 SLFSIHMGNMSFTREQLCWLGKSGELYRPGETAMSPLIDLPSHDQPLTIKPSDGGLKGTH 332

Query: 328 PDGDMTEIEARAAETMREVIREHSENQRKETSTLTESSSQS-GVSHKSESSTKSFNFPIL 387
           P+GD+   EA+AAETMREVIRE+SEN RKE++TLTESSSQS  +SH+SE STKSF FPIL
Sbjct: 333 PNGDLAANEAQAAETMREVIRENSENHRKESATLTESSSQSASLSHQSEGSTKSFQFPIL 392

Query: 388 AGDGGKTVSLKRGESQKAKQEMKSESPH-EASDPQTPKESSSDEPPKAAANVGQKKWFSR 410
            GDGGK++S K G+ +KAKQE K ESP   AS  +TPKESS+ E PKAAAN   K+WFS 
Sbjct: 393 TGDGGKSISFKGGDPEKAKQETKLESPQPAASSSETPKESSTSESPKAAAN-APKRWFSC 452

[Close]

BLAST of Sed0021860 vs. ExPASy TrEMBL
Match: A0A0A0LUN5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G013790 PE=4 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 5.9e-103
Identity = 234/426 (54.93%), Postives = 274/426 (64.32%), Query Frame = 0


Query: 29  SDESNTHHSKKLCSFELVVNEPGQSIGGIIDSLKRNKLHVAGHSDSEFEFISGGDTETRP 88
           S  S+   S    SFEL+V     SIG   DSLK+++LHV G SDS F FI+  D  T  
Sbjct: 34  SSLSSASDSSSDSSFELIVTGLDGSIGVASDSLKKDELHVVGRSDSGFVFITSDDVGTHS 93

Query: 89  PMGDLSGTAEISSCLLPHSSSPPAKDK--DSV-----SMETDLNKTLPNPKHGEADNIVS 148
           P  DL GTA+I S  L  SSS  ++    D V      +E D  K LP  KHGE +N+ S
Sbjct: 94  PKTDLPGTAKIPSQSLSRSSSSSSESSLHDHVIELPKPVEPDSKKRLPGLKHGETNNVES 153

Query: 149 QFFFGGHAS-------------------------GNDPNSPSMERDNRL----------G 208
           +      +S                           +P+SPS+ +DNRL           
Sbjct: 154 RKSIQTCSSTSSSSSSESESKHKLQKGRDVDNLLSKNPSSPSVVKDNRLVTDFSDDDVPT 213

Query: 209 SNGQSPVTLMHRTDSGLGHDAATQYPPTQMMERADDPTSPAYRFPSHVFARTKSTT--DW 268
           SNGQS VT  HR DS  G +  TQYP TQMM+R +DPTSPAYR PS VF+RTKST   +W
Sbjct: 214 SNGQSAVTPTHRVDSSSGCETPTQYPQTQMMDRVEDPTSPAYRIPSRVFSRTKSTAPMEW 273

Query: 269 SAASNESLFSIQMGNMSFTREQMAWLGKSGELCRPGESAIDLSQPPNMNQSDSALKGTHP 328
           S ASNESLFSIQMGNMSFTREQ+ WLGKSGELCRPGES ID+SQ   M  SD  LK   P
Sbjct: 274 SVASNESLFSIQMGNMSFTREQLCWLGKSGELCRPGESTIDMSQHLAMKTSDCGLKSKSP 333

Query: 329 DGDMTEIEARAAETMREVIREHSENQRKETSTLTESSSQS-GVSHKSESSTKSFNFPILA 388
           +GD++  EARAAETMREVIRE+SENQRKE+STLTESSSQS  +SH+SE STKSF FPIL 
Sbjct: 334 NGDLSATEARAAETMREVIRENSENQRKESSTLTESSSQSASISHQSEGSTKSFQFPILT 393

Query: 389 GDGGKTVSLKRGESQKAKQEMKSESPHEASDPQTPKESSSDEPPKAAANVGQKKWFSRFS 410
           G+GGK++SLK G+ +KAKQE K ESP   S+PQTPKE +SDE PKA  N GQK+WFS FS
Sbjct: 394 GEGGKSISLKGGDLEKAKQEGKPESPETPSNPQTPKEKNSDESPKATTNTGQKRWFSCFS 453

[Close]

BLAST of Sed0021860 vs. ExPASy TrEMBL
Match: A0A5A7UV09 (Putative serine-rich protein C215.13-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G003000 PE=4 SV=1)

HSP 1 Score: 377.5 bits (968), Expect = 7.2e-101
Identity = 237/437 (54.23%), Postives = 276/437 (63.16%), Query Frame = 0


Query: 29  SDESNTHHSKKLCSFELVVNEPGQSIGGIIDSLKRNKLHVAGHSDSEFEFISGGDTETRP 88
           S  S+   S    SFEL+V     SIG   DSL++++LH  G SDSEF FIS  D  T  
Sbjct: 116 SSSSSASDSSSESSFELIVTGLDGSIGVTSDSLEKDELHAVG-SDSEFVFISSDDVGTHS 175

Query: 89  PMGDLSGTAEISSCLLPHSSS---------------PPAKDKDSVSMETDLNKTLPNPKH 148
           PM D   TA+I S  L  SSS                P K +D+  ME DL KT    +H
Sbjct: 176 PMADPPCTAKIPSQSLSRSSSSASESSLHGHVIELPKPEKYEDTNGMEPDLKKTPSGLEH 235

Query: 149 GEADNIVS----------------------QFFFGGHASGN----DPNSPSMERDNRL-- 208
           GE +N+ S                      +   GG  + N    +P+SPS+E+DNRL  
Sbjct: 236 GETNNVESRKSIQTCSSTSSSSSSESESKPELQKGGDVADNLLSKNPSSPSVEKDNRLVT 295

Query: 209 --------GSNGQSPVTLMHRTDSGLGHDAATQYPPTQMMERADDPTSPAYRFPSHVFAR 268
                    SN QS  T  HR DS  G +  TQYPPTQMM+R DDPTSPAYR PS VF+R
Sbjct: 296 DFSDDDVPVSNEQSAATPTHRVDSSSGSETPTQYPPTQMMDRVDDPTSPAYRIPSRVFSR 355

Query: 269 TKSTT--DWSAASNESLFSIQMGNMSFTREQMAWLGKSGELCRPGESAIDLSQPPNMNQS 328
           TKST   +WS ASNESLFSIQMGNMSFTREQ+ WLGKSGELCRPGES ID+SQ   M  S
Sbjct: 356 TKSTAPMEWSVASNESLFSIQMGNMSFTREQLCWLGKSGELCRPGESTIDMSQHLAMKTS 415

Query: 329 DSALKGTHPDGDMTEIEARAAETMREVIREHSENQRKETSTLTESSSQS-GVSHKSESST 388
           D  LK   P+GD+   EARAAETMREVIRE+SENQRKE+STLTESSSQS  +SH+SE ST
Sbjct: 416 DCGLKSKSPNGDLAATEARAAETMREVIRENSENQRKESSTLTESSSQSASISHQSEGST 475

Query: 389 KSFNFPILAGDGGKTVSLKRGESQKAKQEMKSESPHEASDPQTPKESS-SDEPPKAAA-N 410
           KSF FPIL G+GGK++SLK G+ +KAKQE K ESP   S+PQTPKE++ SDE PKA   N
Sbjct: 476 KSFQFPILTGEGGKSISLKGGDPEKAKQEGKPESPEAPSNPQTPKETTKSDESPKATTNN 535

[Close]

BLAST of Sed0021860 vs. ExPASy TrEMBL
Match: A0A1S3BVA3 (uncharacterized protein LOC103494046 OS=Cucumis melo OX=3656 GN=LOC103494046 PE=4 SV=1)

HSP 1 Score: 377.5 bits (968), Expect = 7.2e-101
Identity = 237/437 (54.23%), Postives = 276/437 (63.16%), Query Frame = 0


Query: 29  SDESNTHHSKKLCSFELVVNEPGQSIGGIIDSLKRNKLHVAGHSDSEFEFISGGDTETRP 88
           S  S+   S    SFEL+V     SIG   DSL++++LH  G SDSEF FIS  D  T  
Sbjct: 34  SSSSSASDSSSESSFELIVTGLDGSIGVTSDSLEKDELHAVG-SDSEFVFISSDDVGTHS 93

Query: 89  PMGDLSGTAEISSCLLPHSSS---------------PPAKDKDSVSMETDLNKTLPNPKH 148
           PM D   TA+I S  L  SSS                P K +D+  ME DL KT    +H
Sbjct: 94  PMADPPCTAKIPSQSLSRSSSSASESSLHGHVIELPKPEKYEDTNGMEPDLKKTPSGLEH 153

Query: 149 GEADNIVS----------------------QFFFGGHASGN----DPNSPSMERDNRL-- 208
           GE +N+ S                      +   GG  + N    +P+SPS+E+DNRL  
Sbjct: 154 GETNNVESRKSIQTCSSTSSSSSSESESKPELQKGGDVADNLLSKNPSSPSVEKDNRLVT 213

Query: 209 --------GSNGQSPVTLMHRTDSGLGHDAATQYPPTQMMERADDPTSPAYRFPSHVFAR 268
                    SN QS  T  HR DS  G +  TQYPPTQMM+R DDPTSPAYR PS VF+R
Sbjct: 214 DFSDDDVPVSNEQSAATPTHRVDSSSGSETPTQYPPTQMMDRVDDPTSPAYRIPSRVFSR 273

Query: 269 TKSTT--DWSAASNESLFSIQMGNMSFTREQMAWLGKSGELCRPGESAIDLSQPPNMNQS 328
           TKST   +WS ASNESLFSIQMGNMSFTREQ+ WLGKSGELCRPGES ID+SQ   M  S
Sbjct: 274 TKSTAPMEWSVASNESLFSIQMGNMSFTREQLCWLGKSGELCRPGESTIDMSQHLAMKTS 333

Query: 329 DSALKGTHPDGDMTEIEARAAETMREVIREHSENQRKETSTLTESSSQS-GVSHKSESST 388
           D  LK   P+GD+   EARAAETMREVIRE+SENQRKE+STLTESSSQS  +SH+SE ST
Sbjct: 334 DCGLKSKSPNGDLAATEARAAETMREVIRENSENQRKESSTLTESSSQSASISHQSEGST 393

Query: 389 KSFNFPILAGDGGKTVSLKRGESQKAKQEMKSESPHEASDPQTPKESS-SDEPPKAAA-N 410
           KSF FPIL G+GGK++SLK G+ +KAKQE K ESP   S+PQTPKE++ SDE PKA   N
Sbjct: 394 KSFQFPILTGEGGKSISLKGGDPEKAKQEGKPESPEAPSNPQTPKETTKSDESPKATTNN 453

[Close]

BLAST of Sed0021860 vs. ExPASy TrEMBL
Match: A0A6J1C0E0 (suppressor protein SRP40 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111007326 PE=4 SV=1)

HSP 1 Score: 362.8 bits (930), Expect = 1.8e-96
Identity = 228/428 (53.27%), Postives = 274/428 (64.02%), Query Frame = 0


Query: 28  ISDESNTHHSKKLCSFELVVNEPGQSIGGIIDSLKRNKLHVAGHSDSEFEFISGGDTETR 87
           +S  S+   S    SFEL++N+  +  GG  D LK  +L+VAGHS+SEFEFIS  D ETR
Sbjct: 33  VSSLSSASDSSSDSSFELILNDSSEFPGGTSDPLKTKELNVAGHSESEFEFISSDDIETR 92

Query: 88  PPMGDLSGTAEISSCLLPHSSS-----------------PPAKDKDSVSMETDLNKTLPN 147
               +L   A+ SS  L  SSS                  P K+KDS  ME DL+K+L  
Sbjct: 93  -SAANLPSAAKTSSRSLSRSSSSSSASESSLCDHVIELPKPEKNKDSKVMEADLSKSLQT 152

Query: 148 PKHGEADNIVSQ----FFFGGHASGNDPNSPSMERDNRL--------------GSNGQSP 207
                + +  S+             N+P+SPSM++DNRL               SNGQSP
Sbjct: 153 SSSSSSSSSESEAKRKIKLQQGGVSNNPSSPSMDKDNRLVEDFSDDDVPISSMASNGQSP 212

Query: 208 VTLMHRTDSGLGHDAATQYPPTQMMERADDPTSPAYRFPSHVFARTKSTT--DWSAASNE 267
               +R D   G +AATQYP TQ+MER DDP SP+YR PSHVF+RTKS +  +WS ASNE
Sbjct: 213 AAPTNRIDLSAGSEAATQYPQTQLMERVDDPNSPSYRIPSHVFSRTKSKSAMEWSVASNE 272

Query: 268 SLFSIQMGNMSFTREQMAWLGKSGELCRPGESA----IDL---SQPPNMNQSDSALKGTH 327
           SLFSI MGNMSFTREQ+ WLGKSGEL RPGE+A    IDL    QP  +  SD  LKGTH
Sbjct: 273 SLFSIHMGNMSFTREQLCWLGKSGELYRPGETAMSPLIDLPSHDQPLTIKPSDGGLKGTH 332

Query: 328 PDGDMTEIEARAAETMREVIREHSENQRKETSTLTESSSQS-GVSHKSESSTKSFNFPIL 387
           P+GD+   EA+AAETMREVIRE+SEN RKE++TLTESSSQS  +SH+SE STKSF FPIL
Sbjct: 333 PNGDLAANEAQAAETMREVIRENSENHRKESATLTESSSQSASLSHQSEGSTKSFQFPIL 392

Query: 388 AGDGGKTVSLKRGESQKAKQEMKSESPH-EASDPQTPKESSSDEPPKAAANVGQKKWFSR 410
            GDGGK++S K G+ +KAKQE K ESP   AS  +TPKESS+ E PKAAAN   K+WFS 
Sbjct: 393 TGDGGKSISFKGGDPEKAKQETKLESPQPAASSSETPKESSTSESPKAAAN-APKRWFSC 452

[Close]

BLAST of Sed0021860 vs. ExPASy TrEMBL
Match: A0A6J1C0F1 (uncharacterized protein LOC111007326 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111007326 PE=4 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 6.5e-94
Identity = 223/407 (54.79%), Postives = 268/407 (65.85%), Query Frame = 0


Query: 28  ISDESNTHHSKKLCSFELVVNEPGQSIGGIIDSLKRNKLHVAGHSDSEFEFISGGDTETR 87
           +S  S+   S    SFEL++N+  +  GG  D LK  +L+VAGHS+SEFEFIS  D ETR
Sbjct: 33  VSSLSSASDSSSDSSFELILNDSSEFPGGTSDPLKTKELNVAGHSESEFEFISSDDIETR 92

Query: 88  PPMGDLSGTAEISSCLLPHSSSPPAKDKDSVSMETDLNKTLPNPKHGEADNIVSQFFFGG 147
               +L   A+ SS  L  SSS  +  + S+    D    LP P+  +          GG
Sbjct: 93  -SAANLPSAAKTSSRSLSRSSSSSSASESSL---CDHVIELPKPEKNKDSK-------GG 152

Query: 148 HASGNDPNSPSMERDNRL--------------GSNGQSPVTLMHRTDSGLGHDAATQYPP 207
               N+P+SPSM++DNRL               SNGQSP    +R D   G +AATQYP 
Sbjct: 153 --VSNNPSSPSMDKDNRLVEDFSDDDVPISSMASNGQSPAAPTNRIDLSAGSEAATQYPQ 212

Query: 208 TQMMERADDPTSPAYRFPSHVFARTKSTT--DWSAASNESLFSIQMGNMSFTREQMAWLG 267
           TQ+MER DDP SP+YR PSHVF+RTKS +  +WS ASNESLFSI MGNMSFTREQ+ WLG
Sbjct: 213 TQLMERVDDPNSPSYRIPSHVFSRTKSKSAMEWSVASNESLFSIHMGNMSFTREQLCWLG 272

Query: 268 KSGELCRPGESA----IDL---SQPPNMNQSDSALKGTHPDGDMTEIEARAAETMREVIR 327
           KSGEL RPGE+A    IDL    QP  +  SD  LKGTHP+GD+   EA+AAETMREVIR
Sbjct: 273 KSGELYRPGETAMSPLIDLPSHDQPLTIKPSDGGLKGTHPNGDLAANEAQAAETMREVIR 332

Query: 328 EHSENQRKETSTLTESSSQS-GVSHKSESSTKSFNFPILAGDGGKTVSLKRGESQKAKQE 387
           E+SEN RKE++TLTESSSQS  +SH+SE STKSF FPIL GDGGK++S K G+ +KAKQE
Sbjct: 333 ENSENHRKESATLTESSSQSASLSHQSEGSTKSFQFPILTGDGGKSISFKGGDPEKAKQE 392

Query: 388 MKSESPH-EASDPQTPKESSSDEPPKAAANVGQKKWFSRFSCCPLRS 410
            K ESP   AS  +TPKESS+ E PKAAAN   K+WFS FSCCP  S
Sbjct: 393 TKLESPQPAASSSETPKESSTSESPKAAAN-APKRWFSCFSCCPFCS 425

[Close]

BLAST of Sed0021860 vs. TAIR 10
Match: AT1G74220.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G03630.1); Has 383 Blast hits to 347 proteins in 86 species: Archae - 0; Bacteria - 17; Metazoa - 87; Fungi - 65; Plants - 76; Viruses - 2; Other Eukaryotes - 136 (source: NCBI BLink). )

HSP 1 Score: 86.3 bits (212), Expect = 6.3e-17
Identity = 110/323 (34.06%), Postives = 140/323 (43.34%), Query Frame = 0


Query: 142 QFFFG--GHASGNDPNSPSME----RDNRLGSNGQSPVTLMHRTDSGLGHDAATQYPPTQ 201
           Q FF     +S N  + P  E    R +   S+  S +    R D    H+   Q PPTQ
Sbjct: 7   QSFFSPTNQSSRNLASKPETEDPIIRLSSSSSSSCSSIEAEPRPDQNHNHNNVEQSPPTQ 66

Query: 202 MMERADD---------PTSPAYRFPSHVFARTKSTT-DWSAASNESLFSIQMGNMSFTRE 261
           +MER+ +         P +P YR PSHVFART ST  +WS  SNESLFSI MGN SFT  
Sbjct: 67  VMERSTNNTTTTTTSTPNTPPYRIPSHVFARTTSTAPEWSTISNESLFSIHMGNNSFTGG 126

Query: 262 QMAWLGKSGELCRP-GESAIDL-------SQPPNMNQS-------------DSALKGTHP 321
                 KSGEL  P   S I         S P N+NQ              D   K    
Sbjct: 127 DYF---KSGELTFPQPPSPITSPLPSPLPSTPHNVNQGGAVGAAAEVKTPVDIGKKAAET 186

Query: 322 D---GDMTEIEARAAETMREVI-REHSENQRKETSTLTESSSQSGVSHKSES-STKSFNF 381
           D       E E +AA ++REVI    + N   +T+ L  S     VS +SE+ S KSF F
Sbjct: 187 DKAYRASKEDEQKAAASIREVIMANEAANNNNKTNKLDRS-----VSRRSENLSVKSFAF 246

Query: 382 PILAGDGGKTVSLKRGESQKAKQEMKSESPHEASDPQTPKESS---------SDEPPKAA 406
           P++        +  +G  Q +  E K  +P   S P+TPK S+          +E PK  
Sbjct: 247 PVMG-------NADKGGLQGSTPEKKQRNP---SQPETPKISTEAEGDVGLKKEEAPKPV 306

[Close]

BLAST of Sed0021860 vs. TAIR 10
Match: AT2G03630.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G74220.1); Has 87 Blast hits to 87 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 58.2 bits (139), Expect = 1.9e-08
Identity = 37/79 (46.84%), Postives = 46/79 (58.23%), Query Frame = 0


Query: 185 HDAATQYPPTQMMERADDPTSPAYRFPSHVFARTKST--TDWSAASNESLFSIQMGNMSF 244
           +D     PP Q+M+R ++      R PS VF R+KS    +WS  SNESLFSI +GN SF
Sbjct: 85  NDPEISSPPVQVMDRDNNGKYDPNRIPSSVFERSKSNVPAEWSCTSNESLFSIHLGNNSF 144

Query: 245 TREQMAWLGKSGELCRPGE 262
           T      L KSGEL + GE
Sbjct: 145 T-GYGGDLMKSGELYKSGE 162

[Close]

BLAST of Sed0021860 vs. TAIR 10
Match: AT2G03630.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G74220.1); Has 126 Blast hits to 126 proteins in 28 species: Archae - 0; Bacteria - 6; Metazoa - 7; Fungi - 5; Plants - 87; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). )

HSP 1 Score: 57.0 bits (136), Expect = 4.1e-08
Identity = 50/169 (29.59%), Postives = 81/169 (47.93%), Query Frame = 0


Query: 185 HDAATQYPPTQMMERADDPTSPAYRFPSHVFARTKST--TDWSAASNESLFSIQMGNMSF 244
           +D     PP Q+M+R ++      R PS VF R+KS    +WS  SNESLFSI +GN SF
Sbjct: 85  NDPEISSPPVQVMDRDNNGKYDPNRIPSSVFERSKSNVPAEWSCTSNESLFSIHLGNNSF 144

Query: 245 TREQMAWLGKSGELCRPGE----------SAIDLSQPPNMNQSDSALKGTHPDGDMTEIE 304
           T      L KSGEL + GE            +  S+P  + +    ++    +  +   E
Sbjct: 145 T-GYGGDLMKSGELYKSGELLAYSPGLPMPPVPGSEPKPVVEEPKVVESDKEEKVVLVEE 204

Query: 305 ARAAETMREVIREHSENQRKETSTLTESSSQSGVSHKSESSTKSFNFPI 342
              + +  E  +  S  + +  +   ++ + S  S++S +S  SF+FP+
Sbjct: 205 THTSSSDEEEGKRESHEKEQHPAVSWKTPTTSYRSNRSSNSAHSFSFPM 252

The following BLAST results are available for this feature:

BLAST of Sed0021860 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038880274.1	3.8e-104	53.62	uncharacterized serine-rich protein C215.13 [Benincasa hispida]	[more]
XP_011648451.1	1.2e-102	54.93	uncharacterized protein LOC105434465 [Cucumis sativus] >KGN63731.1 hypothetical ...	[more]
KAA0057996.1	1.5e-100	54.23	putative serine-rich protein C215.13-like protein [Cucumis melo var. makuwa]	[more]
XP_008453279.1	1.5e-100	54.23	PREDICTED: uncharacterized protein LOC103494046 [Cucumis melo]	[more]
XP_022135339.1	3.8e-96	53.27	suppressor protein SRP40 isoform X1 [Momordica charantia] >XP_022135340.1 suppre...	[more]

BLAST of Sed0021860 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0021860 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LUN5	5.9e-103	54.93	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G013790 PE=4 SV=1	[more]
A0A5A7UV09	7.2e-101	54.23	Putative serine-rich protein C215.13-like protein OS=Cucumis melo var. makuwa OX...	[more]
A0A1S3BVA3	7.2e-101	54.23	uncharacterized protein LOC103494046 OS=Cucumis melo OX=3656 GN=LOC103494046 PE=...	[more]
A0A6J1C0E0	1.8e-96	53.27	suppressor protein SRP40 isoform X1 OS=Momordica charantia OX=3673 GN=LOC1110073...	[more]
A0A6J1C0F1	6.5e-94	54.79	uncharacterized protein LOC111007326 isoform X2 OS=Momordica charantia OX=3673 G...	[more]

BLAST of Sed0021860 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G74220.1	6.3e-17	34.06	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G03630.2	1.9e-08	46.84	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G03630.1	4.1e-08	29.59	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 260..286
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 144..185
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 352..378
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 148..177
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 305..395
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 100..115
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 77..122
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 314..339
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 266..280
None	No IPR available	PANTHER	PTHR33673:SF22	SMOOTHELIN-LIKE PROTEIN 1	coord: 125..407
None	No IPR available	PANTHER	PTHR33673	SUPPRESSOR SRP40-LIKE PROTEIN	coord: 125..407

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0021860.1	Sed0021860.1	mRNA