Sed0021841 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CAACCATCACAAAAACAAATTCCAAAAAAAAAAAAACTCTCCTTTTGCAAATTATGGGTTTGAGAGACAGAGAAATTAGGGCTCAAGCAGATTTGGTGAAGATTGGGAGAGAAGGATTTGACCTAATTGACAAATTCTACGGTCGGTCACCGGCGGGAAGACGGGCACCAACACCGGCGAGGCAGGCGCTGCCGCAACCGCCGCGTACGGCGGAGCAAACTCCTTCAATAAGGAAGAAGAATGAAATTCCGATGGCGCCGGAGAACTCCGATCAGGCGGCGAAAACACGTGGTGGATTCGTGGTTACAACTTGGCGTATATAG CAACCATCACAAAAACAAATTCCAAAAAAAAAAAAACTCTCCTTTTGCAAATTATGGGTTTGAGAGACAGAGAAATTAGGGCTCAAGCAGATTTGGTGAAGATTGGGAGAGAAGGATTTGACCTAATTGACAAATTCTACGGTCGGTCACCGGCGGGAAGACGGGCACCAACACCGGCGAGGCAGGCGCTGCCGCAACCGCCGCGTACGGCGGAGCAAACTCCTTCAATAAGGAAGAAGAATGAAATTCCGATGGCGCCGGAGAACTCCGATCAGGCGGCGAAAACACGTGGTGGATTCGTGGTTACAACTTGGCGTATATAG ATGGGTTTGAGAGACAGAGAAATTAGGGCTCAAGCAGATTTGGTGAAGATTGGGAGAGAAGGATTTGACCTAATTGACAAATTCTACGGTCGGTCACCGGCGGGAAGACGGGCACCAACACCGGCGAGGCAGGCGCTGCCGCAACCGCCGCGTACGGCGGAGCAAACTCCTTCAATAAGGAAGAAGAATGAAATTCCGATGGCGCCGGAGAACTCCGATCAGGCGGCGAAAACACGTGGTGGATTCGTGGTTACAACTTGGCGTATATAG MGLRDREIRAQADLVKIGREGFDLIDKFYGRSPAGRRAPTPARQALPQPPRTAEQTPSIRKKNEIPMAPENSDQAAKTRGGFVVTTWRI Homology
BLAST of Sed0021841 vs. NCBI nr
Match: KGN47422.1 (hypothetical protein Csa_021740 [Cucumis sativus]) HSP 1 Score: 89.0 bits (219), Expect = 2.3e-14 Identity = 53/90 (58.89%), Postives = 63/90 (70.00%), Query Frame = 0
BLAST of Sed0021841 vs. NCBI nr
Match: KAG6575081.1 (hypothetical protein SDJN03_25720, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 82.0 bits (201), Expect = 2.8e-12 Identity = 47/80 (58.75%), Postives = 54/80 (67.50%), Query Frame = 0
BLAST of Sed0021841 vs. NCBI nr
Match: KAG6575082.1 (hypothetical protein SDJN03_25721, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 81.6 bits (200), Expect = 3.7e-12 Identity = 46/78 (58.97%), Postives = 54/78 (69.23%), Query Frame = 0
BLAST of Sed0021841 vs. NCBI nr
Match: KGN47421.1 (hypothetical protein Csa_021737 [Cucumis sativus]) HSP 1 Score: 73.2 bits (178), Expect = 1.3e-09 Identity = 52/94 (55.32%), Postives = 58/94 (61.70%), Query Frame = 0
BLAST of Sed0021841 vs. NCBI nr
Match: XP_023548315.1 (multiple organellar RNA editing factor 3, mitochondrial [Cucurbita pepo subsp. pepo]) HSP 1 Score: 58.5 bits (140), Expect = 3.3e-05 Identity = 37/66 (56.06%), Postives = 43/66 (65.15%), Query Frame = 0
BLAST of Sed0021841 vs. ExPASy TrEMBL
Match: A0A0A0KG95 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G318690 PE=4 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 1.1e-14 Identity = 53/90 (58.89%), Postives = 63/90 (70.00%), Query Frame = 0
BLAST of Sed0021841 vs. ExPASy TrEMBL
Match: A0A0A0KI19 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G318680 PE=4 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 6.3e-10 Identity = 52/94 (55.32%), Postives = 58/94 (61.70%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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