Sed0021821 (gene) Chayote v1

BLAST of Sed0021821 vs. NCBI nr
Match: KAA0048297.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 327.0 bits (837), Expect = 3.2e-85
Identity = 207/483 (42.86%), Postives = 283/483 (58.59%), Query Frame = 0

Query: 31  QIWPIQHR------RSKIGSSILEKMLHYKTAKDIWVCLSQIFNLRNLAQVMKLKSTLQT 90
           ++W  Q R         +   IL +MLH K+AK+IW  L  IF+ R LAQ M+ K+ L  
Sbjct: 89  KVWKRQDRLISSWLLGSMSEEILNQMLHCKSAKEIWETLQGIFSSRYLAQAMQFKNKLHN 148

Query: 91  IKKGGSTLSEYFSKIKKCVDVLTAVGKLIPLEDHIMYILAGLGLEYDSMVSVITTKICSY 150
           IKKG   L EYF KI +CVD L ++ K +  +DHI+YILAGLG +Y SM+SVI+ +  S 
Sbjct: 149 IKKGSMPLKEYFLKILQCVDALASINKPVSSDDHILYILAGLGSDYQSMISVISARTDSP 208

Query: 151 TVQDFMALLMTHETRLEAKAMSIESVHPVANVHIQ---HSSPSFKDNNSHQQSNNGNQRG 210
           +VQ+ M+LL+T E++ E+K +S E+  P  N+  Q     + S+   N +   NN +   
Sbjct: 209 SVQEVMSLLLTQESQNESKLIS-ETALPSVNIVTQTTEKGAESYIRTNQNNYHNNHSYNQ 268

Query: 211 RGRSGNNRGGRSNLNNRNKLQCYHCGCYGYTTNRCYYINDFSQQHPRYSPRAPKENQVTV 270
           RG  GN R  R    NRNK QC  C   GY+ +RC++         RY+PR+        
Sbjct: 269 RGGRGNGRSNRGRRGNRNKPQCQICAKLGYSADRCFF---------RYTPRSNSSGYSPN 328

Query: 271 PQSMMYGSMGYQIQHVAQLANLPHASYGQDPNWYPDPGATNHLTNNMGNLSVSSEYQGNN 330
             +  Y +M    Q  A +A L       D NWYPD GATNHLT+++ NLS+ SEY G N
Sbjct: 329 SHNTSYTNMNNHPQMSAMVAAL---DLNIDSNWYPDSGATNHLTHSLSNLSIGSEYGGGN 388

Query: 331 QVHMGNGACLATTHCGYGSIMSSN---RVFHLNDLLHVPTITKNLISVSQFARDNSVYFK 390
           Q++  NG+ L  TH G  S  SS    + F LN+LL VP+ITKNLISVSQFA+DN V+F+
Sbjct: 389 QIYAANGSGLPITHYGSMSFNSSTLPFKSFTLNNLLQVPSITKNLISVSQFAKDNHVFFE 448

Query: 391 FHPSYCLVKDRASNQELLRGTLHNGLYRFDLNSHVQNPTSHVSNVVEYSLPYSNSVV--S 450
           FHP+ C VKD  + Q LL+G L++GLY+F +     +   H SN    + P  N+VV  S
Sbjct: 449 FHPTLCYVKDLDTGQVLLQGLLNDGLYKFTIEP--SHKRLHHSN--SNTKPVFNTVVPKS 508

Query: 451 NSPSNGSIINNTLDVWHRRLGHPSLSTFQSIVKNCMPSLLHCSNKSSFCDVCALGKNHAL 500
           N+P         LD+WHRRLGHP L   ++++ N + +     NK +FC+ CALGK+HAL
Sbjct: 509 NTP--------LLDLWHRRLGHPHLPIVKAVL-NHIDNSSGTINKLNFCEACALGKHHAL 545

BLAST of Sed0021821 vs. NCBI nr
Match: TYK10642.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 327.0 bits (837), Expect = 3.2e-85
Identity = 207/483 (42.86%), Postives = 283/483 (58.59%), Query Frame = 0

Query: 31  QIWPIQHR------RSKIGSSILEKMLHYKTAKDIWVCLSQIFNLRNLAQVMKLKSTLQT 90
           ++W  Q R         +   IL +MLH K+AK+IW  L  IF+ R LAQ M+ K+ L  
Sbjct: 89  KVWKRQDRLISSWLLGSMSEEILNQMLHCKSAKEIWETLQGIFSSRYLAQAMQFKNKLHN 148

Query: 91  IKKGGSTLSEYFSKIKKCVDVLTAVGKLIPLEDHIMYILAGLGLEYDSMVSVITTKICSY 150
           IKKG   L EYF KI +CVD L ++ K +  +DHI+YILAGLG +Y SM+SVI+ +  S 
Sbjct: 149 IKKGSMPLKEYFLKILQCVDALASINKPVSSDDHILYILAGLGSDYQSMISVISARTDSP 208

Query: 151 TVQDFMALLMTHETRLEAKAMSIESVHPVANVHIQ---HSSPSFKDNNSHQQSNNGNQRG 210
           +VQ+ M+LL+T E++ E+K +S E+  P  N+  Q     + S+   N +   NN +   
Sbjct: 209 SVQEVMSLLLTQESQNESKLIS-ETALPSVNIVTQTTEKGAESYIRTNQNNYHNNHSYNQ 268

Query: 211 RGRSGNNRGGRSNLNNRNKLQCYHCGCYGYTTNRCYYINDFSQQHPRYSPRAPKENQVTV 270
           RG  GN R  R    NRNK QC  C   GY+ +RC++         RY+PR+        
Sbjct: 269 RGGRGNGRSNRGRRGNRNKPQCQICAKLGYSADRCFF---------RYTPRSNSSGYSPN 328

Query: 271 PQSMMYGSMGYQIQHVAQLANLPHASYGQDPNWYPDPGATNHLTNNMGNLSVSSEYQGNN 330
             +  Y +M    Q  A +A L       D NWYPD GATNHLT+++ NLS+ SEY G N
Sbjct: 329 SHNTSYTNMNNHPQMSAMVAAL---DLNIDSNWYPDSGATNHLTHSLSNLSIGSEYGGGN 388

Query: 331 QVHMGNGACLATTHCGYGSIMSSN---RVFHLNDLLHVPTITKNLISVSQFARDNSVYFK 390
           Q++  NG+ L  TH G  S  SS    + F LN+LL VP+ITKNLISVSQFA+DN V+F+
Sbjct: 389 QIYAANGSGLPITHYGSMSFNSSTLPFKSFTLNNLLQVPSITKNLISVSQFAKDNHVFFE 448

Query: 391 FHPSYCLVKDRASNQELLRGTLHNGLYRFDLNSHVQNPTSHVSNVVEYSLPYSNSVV--S 450
           FHP+ C VKD  + Q LL+G L++GLY+F +     +   H SN    + P  N+VV  S
Sbjct: 449 FHPTLCYVKDLDTGQVLLQGLLNDGLYKFTIEP--SHKRLHHSN--SNTKPVFNTVVPKS 508

Query: 451 NSPSNGSIINNTLDVWHRRLGHPSLSTFQSIVKNCMPSLLHCSNKSSFCDVCALGKNHAL 500
           N+P         LD+WHRRLGHP L   ++++ N + +     NK +FC+ CALGK+HAL
Sbjct: 509 NTP--------LLDLWHRRLGHPHLPIVKAVL-NHIDNSSGTINKLNFCEACALGKHHAL 545

BLAST of Sed0021821 vs. NCBI nr
Match: KZV26181.1 (hypothetical protein F511_06348 [Dorcoceras hygrometricum])

HSP 1 Score: 291.2 bits (744), Expect = 1.9e-74
Identity = 184/477 (38.57%), Postives = 271/477 (56.81%), Query Frame = 0

Query: 40  SKIGSSILEKMLHYKTAKDIWVCLSQIFNLRNLAQVMKLKSTLQTIKKGGSTLSEYFSKI 99
           + +  S   +M+  +T+  +W  ++Q+F  R+ A+VM+ K  LQT+KKG  ++ +Y  K+
Sbjct: 31  ASMSESAQSQMIGCQTSSQLWTRVTQLFATRSKARVMQYKLQLQTLKKGNLSMKDYLGKM 90

Query: 100 KKCVDVLTAVGKLIPLEDHIMYILAGLGLEYDSMVSVITTKICSYTVQDFMALLMTHETR 159
           K  +D+L A G  IP +D I++IL G+G EY+S+V  +T+++ S ++ +  ALL+ HE R
Sbjct: 91  KGYIDILAACGNSIPEDDQILHILGGVGPEYESVVVHVTSRVESLSLSEVGALLLAHEGR 150

Query: 160 LEAKAMSIESVHPVANVHIQHSSPSFKDNNSHQQSNNGNQ-----RGRGRSGNNRGGRSN 219
           +E         + +   H    S +     S +++ N +Q     RGRGR  N RGGR  
Sbjct: 151 IE--------TYNITGGHTASPSVNVTTAPSQRKAENTSQSQPVYRGRGRGRNGRGGRKP 210

Query: 220 LNNRNKLQCYHCGCYGYTTNRCYYINDFSQQHPRYSPRAPKENQVTVPQSMMYGSMGYQI 279
            +N  +  C  CG  G+    CYY  D       + P++   ++ T  Q     S  Y  
Sbjct: 211 WHNNGRPVCQICGIPGHVAEICYYRFD-----KEFVPKSSGVSR-TSQQQFNRSSPSYPP 270

Query: 280 QHVAQLANLPHASYGQDPNWYPDPGATNHLTNNMGNLSVSSEYQGNNQVHMGNGACLATT 339
              A       +    +  WYPD GA++H+TN++GNLSVSSEY G ++V +GNGA L+ +
Sbjct: 271 SAFAS----TKSESASEEWWYPDSGASHHVTNDLGNLSVSSEYTGGSKVQVGNGAGLSIS 330

Query: 340 HCGYGSI--MSSNRVFHLNDLLHVPTITKNLISVSQFARDNSVYFKFHPSYCLVKDRASN 399
           + G  ++    S+R F L +LLHVP ITKNLISVS+FA DN VYF+FHPS+CLVKD A++
Sbjct: 331 NIGESNLNMFPSSRPFLLKNLLHVPLITKNLISVSKFAYDNHVYFEFHPSFCLVKDPATH 390

Query: 400 QELLRGTLHNGLYRFDLNSHVQNPTSHVSNVVEYSLPYSNSVVSNSPSNGSIINNTLDVW 459
             LLRGTLHNGLYRF+L S +  P    + +     P    V   SP    +  NTLD W
Sbjct: 391 VVLLRGTLHNGLYRFNLKSRISGPLHSPACLQSSVSPI--KVPDQSPL--CLPQNTLDKW 450

Query: 460 HRRLGHPSLSTFQSIVKNCMPSLLHCSNKSSFCDVCALGKNHALPFSKISYSLHQTF 510
           H RLGHPS++T + ++ +C   +    N  SFC  C LGKNH LPF + + +    F
Sbjct: 451 HLRLGHPSIATVKQVLLDCNERISKNDN-ISFCSSCQLGKNHLLPFPQSTTNFSAPF 484

BLAST of Sed0021821 vs. NCBI nr
Match: RVW60229.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])

HSP 1 Score: 255.0 bits (650), Expect = 1.5e-63
Identity = 176/499 (35.27%), Postives = 268/499 (53.71%), Query Frame = 0

Query: 40  SKIGSSILEKMLHYKTAKDIWVCLSQIFNLRNLAQVMKLKSTLQTIKKGGSTLSEYFSKI 99
           S IGS+ L +++   +A ++W  +SQ FN ++ A+VM  KS +Q +KK G T+ +Y +K+
Sbjct: 219 SSIGSAFLPQVVGCSSAFEVWNTISQNFNSQSSAKVMFYKSQMQMLKKDGLTMRDYLTKM 278

Query: 100 KKCVDVLTAVGKLIPLEDHIMYILAGLGLEYDSMVSVITTKICSYTVQDFMALLMTHETR 159
           K   D+L   G  I   DHI+ I+ GLG EY+S+++VI++K  S ++Q   + L+ HE R
Sbjct: 279 KNYCDLLATAGHKISDTDHILAIMQGLGDEYESVIAVISSKKSSPSLQYVTSTLIAHEGR 338

Query: 160 LEAKAMSIE-SVHPVANVHIQHSSPSFKDN---NSHQQSNN---GNQRGRGRSGNNRG-G 219
           +  K  S + SV+  +    +  S S+  N   +S  Q+ N   GNQ  RG   +NRG G
Sbjct: 339 IAHKISSNDLSVNYTSQYSNRGPSSSWNSNGYPSSGFQNRNQFGGNQVTRGSFVHNRGRG 398

Query: 220 RSNLNNRNKLQCYHCGCYGYTTNRCYYINDFSQQHPRYSPRAPKENQVTVPQSMMYGSMG 279
           R       K QC  C  +G+T +RC+Y  D     P +    P       P  +  G+  
Sbjct: 399 RGRAQGGIKPQCQLCNKFGHTVHRCFYRYD-----PNFHGNMPANG--PTPGVLGSGARN 458

Query: 280 YQIQHVAQLANLPHASYGQDPN--------------------WYPDPGATNHLTNNMGNL 339
                ++   N+    Y    N                    W+PD GATNH+T+++GNL
Sbjct: 459 GASGSISSAGNVNLTEYDAQENQDYSEMEAMVATPEDLQNCCWFPDSGATNHVTHDLGNL 518

Query: 340 SVSSEYQGNNQVHMGNGACLATTHCG---YGSIMSSNRVFHLNDLLHVPTITKNLISVSQ 399
           +  +EY GN+++HMGNG  L  +H G   + S  S N+V  L ++L VP I KNL+SVSQ
Sbjct: 519 NSGAEYNGNSKIHMGNGTGLKISHIGLSVFPSSSSPNKVLFLKNILRVPAIKKNLLSVSQ 578

Query: 400 FARDNSVYFKFHPSYCLVKDRASNQELLRGTLHNGLYRFDLNSHVQNPTSHVS------- 459
           FARDN+VYF+FHP  C VKD++++  LL+G LH GLY+F+L+  +    S +S       
Sbjct: 579 FARDNNVYFEFHPKVCFVKDKSNHSLLLQGNLHKGLYQFNLSKKLFGKASGLSLSNDKNE 638

Query: 460 -NVVEYSLPYSNSVVSNSPSNGSIINNTLDVWHRRLGHPSLSTFQSIVK-NCMPSLLHCS 499
                 SL ++++  S+ P   +   +  D+WH+RLGHP+      ++  N +P      
Sbjct: 639 LTCCNASLVHNDN--SDFPEKTNSSFHVFDLWHKRLGHPASKIVTQVLNDNKIP--FSTK 698

BLAST of Sed0021821 vs. NCBI nr
Match: CAN81099.1 (hypothetical protein VITISV_017741 [Vitis vinifera])

HSP 1 Score: 247.7 bits (631), Expect = 2.4e-61
Identity = 181/504 (35.91%), Postives = 260/504 (51.59%), Query Frame = 0

Query: 63  LSQIFNLRNLAQVMKLKSTLQTIKKGGSTLSEYFSKIKKCVDVLTAVGKLIPLEDHIMYI 122
           L Q F  +  A+  + K+ LQ  KKGGST+ EY +KIK CVD L +VG  +  +DH+  I
Sbjct: 109 LEQYFASQTRAKAKQFKTQLQHTKKGGSTIDEYLAKIKVCVDSLASVGVSLSTKDHVESI 168

Query: 123 LAGLGLEYDSMVSVITTKICSYTVQDFMALLMTHETRLEAKAMSIESVHPVANVHIQHSS 182
           L GL  +Y+S V+ +  +   ++V++  ALLM HE+R+E    S++S     + H+  S+
Sbjct: 169 LDGLPNDYESFVTSVILRNDDFSVEEIEALLMAHESRVEKNNNSLDS---SPSAHVASSN 228

Query: 183 PSFKDNN--------SHQQSNNGNQRGRGRSGN---------------NRGGRSNL---- 242
              K N         + Q S++G   G GR G+               N  GRSN     
Sbjct: 229 AVEKGNRFKQDYYAANSQGSHSGYNGGFGRGGDFGRRGGFYGGRGFNWNYNGRSNRGGFR 288

Query: 243 -----------------NNRNKLQCYHCGCYGYTTNRCYYINDFSQQHPR------YSPR 302
                            N   K  C  CG  G+   +CYY  D + Q P+       SPR
Sbjct: 289 GRGNKGSFQARPPWNSDNQNEKPACQLCGKIGHVVAQCYYRFDHTFQVPQNLSSRNSSPR 348

Query: 303 APKENQVTVPQSMMYGSMGYQIQHVAQLANLPHASYGQDPNWYPDPGATNHLTNNMGNLS 362
           A             Y S   Q+  V     +P +    D NWYPD GA+NH+T N  NL 
Sbjct: 349 A-------------YYSFSPQVNGV-----IPTSEVFSDDNWYPDSGASNHVTPNPENLM 408

Query: 363 VSSEYQGNNQVHMGNGACLATTHCGYGSIMS--SNRVFHLNDLLHVPTITKNLISVSQFA 422
            S+E+ G NQVH+GNG  L+  H G    +S  S++   LN LLHVP+ITKNL+SVS+FA
Sbjct: 409 KSAEFAGQNQVHVGNGTGLSIKHIGQSEFLSPFSSKPLLLNHLLHVPSITKNLLSVSKFA 468

Query: 423 RDNSVYFKFHPSYCLVKDRASNQELLRGTLHNGLYRFDLNSHVQNPTSHVSNVVEYSLPY 482
           +DN V+F+FH   C VKD+ +   L+ G + +GLY FD        +SH++     SL  
Sbjct: 469 KDNKVFFEFHSDSCFVKDQVTQAVLMVGKVRDGLYAFD--------SSHLALRPTQSLSK 528

Query: 483 SNSVVSNSPSN---GSIINNTLDVWHRRLGHPSLSTFQSIVKNCMPSLLHCSN-KSSFCD 511
           S SVV++S S+    + +++T D+WH+RLGHPS +T ++++  C  ++ H +   S+FC 
Sbjct: 529 SPSVVASSFSSKVCTTSLSSTFDLWHKRLGHPSAATIKNVLSKC--NVAHINKMDSNFCS 577

BLAST of Sed0021821 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 3.1e-35
Identity = 130/472 (27.54%), Postives = 218/472 (46.19%), Query Frame = 0

Query: 42  IGSSILEKMLHYKTAKDIWVCLSQIFNLRNLAQVMKLKSTLQTIKKGGSTLSEYFSKIKK 101
           I  S+   +    TA  IW  L +I+   +   V +L++ L+   KG  T+ +Y   +  
Sbjct: 92  ISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRTQLKQWTKGTKTIDDYMQGLVT 151

Query: 102 CVDVLTAVGKLIPLEDHIMYILAGLGLEYDSMVSVITTKICSYTVQDFMALLMTHETRLE 161
             D L  +GK +  ++ +  +L  L  EY  ++  I  K    T+ +    L+ HE+++ 
Sbjct: 152 RFDQLALLGKPMDHDEQVERVLENLPEEYKPVIDQIAAKDTPPTLTEIHERLLNHESKI- 211

Query: 162 AKAMSIESVHPVANVHIQHSSPSFKDNNSH--------QQSNNGNQRGRGRSGNNRGGRS 221
             A+S  +V P+    + H + +  +NN++         ++NN N +   +S  N    +
Sbjct: 212 -LAVSSATVIPITANAVSHRNTTTTNNNNNGNRNNRYDNRNNNNNSKPWQQSSTNFHPNN 271

Query: 222 NLNNRNKLQCYHCGCYGYTTNRCYYINDF-----SQQHPRYSPRAPKENQVTVPQSMMYG 281
           N +     +C  CG  G++  RC  +  F     SQQ P  SP  P + +          
Sbjct: 272 NQSKPYLGKCQICGVQGHSAKRCSQLQHFLSSVNSQQPP--SPFTPWQPR---------- 331

Query: 282 SMGYQIQHVAQLANLPHASYGQDPNWYPDPGATNHLTNNMGNLSVSSEYQGNNQVHMGNG 341
                       ANL   S     NW  D GAT+H+T++  NLS+   Y G + V + +G
Sbjct: 332 ------------ANLALGSPYSSNNWLLDSGATHHITSDFNNLSLHQPYTGGDDVMVADG 391

Query: 342 ACLATTHCGYGSIMSSNRVFHLNDLLHVPTITKNLISVSQFARDNSVYFKFHPSYCLVKD 401
           + +  +H G  S+ + +R  +L+++L+VP I KNLISV +    N V  +F P+   VKD
Sbjct: 392 STIPISHTGSTSLSTKSRPLNLHNILYVPNIHKNLISVYRLCNANGVSVEFFPASFQVKD 451

Query: 402 RASNQELLRGTLHNGLYRFDLNSHVQNPTSHVSNVVEYSLPYSNSVVSNSPSNGSIINNT 461
             +   LL+G   + LY + + S               S P S   +  SPS+ +    T
Sbjct: 452 LNTGVPLLQGKTKDELYEWPIAS---------------SQPVS---LFASPSSKA----T 511

Query: 462 LDVWHRRLGHPSLSTFQSIVKNCMPSLLHCSNKSSFCDVCALGKNHALPFSK 501
              WH RLGHP+ S   S++ N   S+L+ S+K   C  C + K++ +PFS+
Sbjct: 512 HSSWHARLGHPAPSILNSVISNYSLSVLNPSHKFLSCSDCLINKSNKVPFSQ 515

BLAST of Sed0021821 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 7.0e-27
Identity = 124/467 (26.55%), Postives = 202/467 (43.25%), Query Frame = 0

Query: 42  IGSSILEKMLHYKTAKDIWVCLSQIFNLRNLAQVMKLKSTLQTIKKGGSTLSEYFSKIKK 101
           I  S+   +    TA  IW  L +I+   +   V +L+   +                  
Sbjct: 92  ISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRFITR------------------ 151

Query: 102 CVDVLTAVGKLIPLEDHIMYILAGLGLEYDSMVSVITTKICSYTVQDFMALLMTHETRLE 161
             D L  +GK +  ++ +  +L  L  +Y  ++  I  K    ++ +    L+  E++L 
Sbjct: 152 -FDQLALLGKPMDHDEQVERVLENLPDDYKPVIDQIAAKDTPPSLTEIHERLINRESKLL 211

Query: 162 AKAMSIESVHPVANVHIQHSSPSFKDNNS---HQQSNNGNQRGRGRSGNNRGGRSNLNNR 221
           A   S E V   ANV    ++ + ++ N+   ++  NN N R      ++ G RS+ N +
Sbjct: 212 A-LNSAEVVPITANVVTHRNTNTNRNQNNRGDNRNYNNNNNRSNSWQPSSSGSRSD-NRQ 271

Query: 222 NKL---QCYHCGCYGYTTNRCYYINDF---SQQHPRYSPRAPKENQVTVPQSMMYGSMGY 281
            K    +C  C   G++  RC  ++ F   + Q    SP  P + +              
Sbjct: 272 PKPYLGRCQICSVQGHSAKRCPQLHQFQSTTNQQQSTSPFTPWQPR-------------- 331

Query: 282 QIQHVAQLANLPHASYGQDPNWYPDPGATNHLTNNMGNLSVSSEYQGNNQVHMGNGACLA 341
                   ANL   S     NW  D GAT+H+T++  NLS    Y G + V + +G+ + 
Sbjct: 332 --------ANLAVNSPYNANNWLLDSGATHHITSDFNNLSFHQPYTGGDDVMIADGSTIP 391

Query: 342 TTHCGYGSIMSSNRVFHLNDLLHVPTITKNLISVSQFARDNSVYFKFHPSYCLVKDRASN 401
            TH G  S+ +S+R   LN +L+VP I KNLISV +    N V  +F P+   VKD  + 
Sbjct: 392 ITHTGSASLPTSSRSLDLNKVLYVPNIHKNLISVYRLCNTNRVSVEFFPASFQVKDLNTG 451

Query: 402 QELLRGTLHNGLYRFDLNSHVQNPTSHVSNVVEYSLPYSNSVVSNSPSNGSIINNTLDVW 461
             LL+G   + LY +        P +    V  ++ P S +  S+              W
Sbjct: 452 VPLLQGKTKDELYEW--------PIASSQAVSMFASPCSKATHSS--------------W 493

Query: 462 HRRLGHPSLSTFQSIVKNCMPSLLHCSNKSSFCDVCALGKNHALPFS 500
           H RLGHPSL+   S++ N    +L+ S+K   C  C + K+H +PFS
Sbjct: 512 HSRLGHPSLAILNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPFS 493

BLAST of Sed0021821 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 1.0e-06
Identity = 99/476 (20.80%), Postives = 171/476 (35.92%), Query Frame = 0

Query: 39  RSKIGSSILEKMLHYKTAKDIWVCLSQIFNLRNLAQVMKLKSTLQTIKKG-GSTLSEYFS 98
           R  +   ++  ++   TA+ IW  L  ++  + L   + LK  L  +    G+    + +
Sbjct: 64  RLHLSDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLKKQLYALHMSEGTNFLSHLN 123

Query: 99  KIKKCVDVLTAVGKLIPLEDHIMYILAGLGLEYDSMVSVITTKICSYTVQDFMALLMTHE 158
                +  L  +G  I  ED  + +L  L   YD++ + I     +  ++D  + L+ +E
Sbjct: 124 VFNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILHGKTTIELKDVTSALLLNE 183

Query: 159 TRLEAKAMSIESVHPVANVHIQHSSPSFKDNNSHQQSNNGNQRGRGRSGNN---RGGRSN 218
            ++  K                       +N        G  R   RS NN    G R  
Sbjct: 184 -KMRKK----------------------PENQGQALITEGRGRSYQRSSNNYGRSGARGK 243

Query: 219 LNNRNKLQ---CYHCGCYGYTTNRCYYINDFSQQHPRYSPRAPKENQVTVPQSMMYGSMG 278
             NR+K +   CY+C   G+    C         +PR         +     + M  +  
Sbjct: 244 SKNRSKSRVRNCYNCNQPGHFKRDC--------PNPRKGKGETSGQKNDDNTAAMVQNND 303

Query: 279 YQIQHVAQLANLPHASYGQDPNWYPDPGATNHLT--NNMGNLSVSSEYQGNNQVHMGNGA 338
             +  + +     H S G +  W  D  A++H T   ++    V+ ++     V MGN +
Sbjct: 304 NVVLFINEEEECMHLS-GPESEWVVDTAASHHATPVRDLFCRYVAGDF---GTVKMGNTS 363

Query: 339 CLATTHCGYGSIMSSNRV---FHLNDLLHVPTITKNLISVSQFARDNSVYFKFHPSYCLV 398
              +   G G I     V     L D+ HVP +  NLIS     RD    +  +  + L 
Sbjct: 364 --YSKIAGIGDICIKTNVGCTLVLKDVRHVPDLRMNLISGIALDRDGYESYFANQKWRLT 423

Query: 399 KDRASNQELLRGTLHNGLYRFDLNSHVQNPTSHVSNVVEYSLPYSNSVVSNSPSNGSIIN 458
           K    +  + +G     LYR                        +N+ +     N +   
Sbjct: 424 K---GSLVIAKGVARGTLYR------------------------TNAEICQGELNAAQDE 474

Query: 459 NTLDVWHRRLGHPSLSTFQSIVKNCMPSLLHCSNKSSFCDVCALGKNHALPFSKIS 503
            ++D+WH+R+GH S    Q + K  + S    +     CD C  GK H + F   S
Sbjct: 484 ISVDLWHKRMGHMSEKGLQILAKKSLISYAKGTTVKP-CDYCLFGKQHRVSFQTSS 474

BLAST of Sed0021821 vs. ExPASy TrEMBL
Match: A0A5A7U233 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G00060 PE=4 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 1.5e-85
Identity = 207/483 (42.86%), Postives = 283/483 (58.59%), Query Frame = 0

Query: 31  QIWPIQHR------RSKIGSSILEKMLHYKTAKDIWVCLSQIFNLRNLAQVMKLKSTLQT 90
           ++W  Q R         +   IL +MLH K+AK+IW  L  IF+ R LAQ M+ K+ L  
Sbjct: 89  KVWKRQDRLISSWLLGSMSEEILNQMLHCKSAKEIWETLQGIFSSRYLAQAMQFKNKLHN 148

Query: 91  IKKGGSTLSEYFSKIKKCVDVLTAVGKLIPLEDHIMYILAGLGLEYDSMVSVITTKICSY 150
           IKKG   L EYF KI +CVD L ++ K +  +DHI+YILAGLG +Y SM+SVI+ +  S 
Sbjct: 149 IKKGSMPLKEYFLKILQCVDALASINKPVSSDDHILYILAGLGSDYQSMISVISARTDSP 208

Query: 151 TVQDFMALLMTHETRLEAKAMSIESVHPVANVHIQ---HSSPSFKDNNSHQQSNNGNQRG 210
           +VQ+ M+LL+T E++ E+K +S E+  P  N+  Q     + S+   N +   NN +   
Sbjct: 209 SVQEVMSLLLTQESQNESKLIS-ETALPSVNIVTQTTEKGAESYIRTNQNNYHNNHSYNQ 268

Query: 211 RGRSGNNRGGRSNLNNRNKLQCYHCGCYGYTTNRCYYINDFSQQHPRYSPRAPKENQVTV 270
           RG  GN R  R    NRNK QC  C   GY+ +RC++         RY+PR+        
Sbjct: 269 RGGRGNGRSNRGRRGNRNKPQCQICAKLGYSADRCFF---------RYTPRSNSSGYSPN 328

Query: 271 PQSMMYGSMGYQIQHVAQLANLPHASYGQDPNWYPDPGATNHLTNNMGNLSVSSEYQGNN 330
             +  Y +M    Q  A +A L       D NWYPD GATNHLT+++ NLS+ SEY G N
Sbjct: 329 SHNTSYTNMNNHPQMSAMVAAL---DLNIDSNWYPDSGATNHLTHSLSNLSIGSEYGGGN 388

Query: 331 QVHMGNGACLATTHCGYGSIMSSN---RVFHLNDLLHVPTITKNLISVSQFARDNSVYFK 390
           Q++  NG+ L  TH G  S  SS    + F LN+LL VP+ITKNLISVSQFA+DN V+F+
Sbjct: 389 QIYAANGSGLPITHYGSMSFNSSTLPFKSFTLNNLLQVPSITKNLISVSQFAKDNHVFFE 448

Query: 391 FHPSYCLVKDRASNQELLRGTLHNGLYRFDLNSHVQNPTSHVSNVVEYSLPYSNSVV--S 450
           FHP+ C VKD  + Q LL+G L++GLY+F +     +   H SN    + P  N+VV  S
Sbjct: 449 FHPTLCYVKDLDTGQVLLQGLLNDGLYKFTIEP--SHKRLHHSN--SNTKPVFNTVVPKS 508

Query: 451 NSPSNGSIINNTLDVWHRRLGHPSLSTFQSIVKNCMPSLLHCSNKSSFCDVCALGKNHAL 500
           N+P         LD+WHRRLGHP L   ++++ N + +     NK +FC+ CALGK+HAL
Sbjct: 509 NTP--------LLDLWHRRLGHPHLPIVKAVL-NHIDNSSGTINKLNFCEACALGKHHAL 545

BLAST of Sed0021821 vs. ExPASy TrEMBL
Match: A0A5D3CH97 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold25G00040 PE=4 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 1.5e-85
Identity = 207/483 (42.86%), Postives = 283/483 (58.59%), Query Frame = 0

Query: 31  QIWPIQHR------RSKIGSSILEKMLHYKTAKDIWVCLSQIFNLRNLAQVMKLKSTLQT 90
           ++W  Q R         +   IL +MLH K+AK+IW  L  IF+ R LAQ M+ K+ L  
Sbjct: 89  KVWKRQDRLISSWLLGSMSEEILNQMLHCKSAKEIWETLQGIFSSRYLAQAMQFKNKLHN 148

Query: 91  IKKGGSTLSEYFSKIKKCVDVLTAVGKLIPLEDHIMYILAGLGLEYDSMVSVITTKICSY 150
           IKKG   L EYF KI +CVD L ++ K +  +DHI+YILAGLG +Y SM+SVI+ +  S 
Sbjct: 149 IKKGSMPLKEYFLKILQCVDALASINKPVSSDDHILYILAGLGSDYQSMISVISARTDSP 208

Query: 151 TVQDFMALLMTHETRLEAKAMSIESVHPVANVHIQ---HSSPSFKDNNSHQQSNNGNQRG 210
           +VQ+ M+LL+T E++ E+K +S E+  P  N+  Q     + S+   N +   NN +   
Sbjct: 209 SVQEVMSLLLTQESQNESKLIS-ETALPSVNIVTQTTEKGAESYIRTNQNNYHNNHSYNQ 268

Query: 211 RGRSGNNRGGRSNLNNRNKLQCYHCGCYGYTTNRCYYINDFSQQHPRYSPRAPKENQVTV 270
           RG  GN R  R    NRNK QC  C   GY+ +RC++         RY+PR+        
Sbjct: 269 RGGRGNGRSNRGRRGNRNKPQCQICAKLGYSADRCFF---------RYTPRSNSSGYSPN 328

Query: 271 PQSMMYGSMGYQIQHVAQLANLPHASYGQDPNWYPDPGATNHLTNNMGNLSVSSEYQGNN 330
             +  Y +M    Q  A +A L       D NWYPD GATNHLT+++ NLS+ SEY G N
Sbjct: 329 SHNTSYTNMNNHPQMSAMVAAL---DLNIDSNWYPDSGATNHLTHSLSNLSIGSEYGGGN 388

Query: 331 QVHMGNGACLATTHCGYGSIMSSN---RVFHLNDLLHVPTITKNLISVSQFARDNSVYFK 390
           Q++  NG+ L  TH G  S  SS    + F LN+LL VP+ITKNLISVSQFA+DN V+F+
Sbjct: 389 QIYAANGSGLPITHYGSMSFNSSTLPFKSFTLNNLLQVPSITKNLISVSQFAKDNHVFFE 448

Query: 391 FHPSYCLVKDRASNQELLRGTLHNGLYRFDLNSHVQNPTSHVSNVVEYSLPYSNSVV--S 450
           FHP+ C VKD  + Q LL+G L++GLY+F +     +   H SN    + P  N+VV  S
Sbjct: 449 FHPTLCYVKDLDTGQVLLQGLLNDGLYKFTIEP--SHKRLHHSN--SNTKPVFNTVVPKS 508

Query: 451 NSPSNGSIINNTLDVWHRRLGHPSLSTFQSIVKNCMPSLLHCSNKSSFCDVCALGKNHAL 500
           N+P         LD+WHRRLGHP L   ++++ N + +     NK +FC+ CALGK+HAL
Sbjct: 509 NTP--------LLDLWHRRLGHPHLPIVKAVL-NHIDNSSGTINKLNFCEACALGKHHAL 545

BLAST of Sed0021821 vs. ExPASy TrEMBL
Match: A0A2Z7AWA7 (Integrase catalytic domain-containing protein OS=Dorcoceras hygrometricum OX=472368 GN=F511_06348 PE=4 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 9.3e-75
Identity = 184/477 (38.57%), Postives = 271/477 (56.81%), Query Frame = 0

Query: 40  SKIGSSILEKMLHYKTAKDIWVCLSQIFNLRNLAQVMKLKSTLQTIKKGGSTLSEYFSKI 99
           + +  S   +M+  +T+  +W  ++Q+F  R+ A+VM+ K  LQT+KKG  ++ +Y  K+
Sbjct: 31  ASMSESAQSQMIGCQTSSQLWTRVTQLFATRSKARVMQYKLQLQTLKKGNLSMKDYLGKM 90

Query: 100 KKCVDVLTAVGKLIPLEDHIMYILAGLGLEYDSMVSVITTKICSYTVQDFMALLMTHETR 159
           K  +D+L A G  IP +D I++IL G+G EY+S+V  +T+++ S ++ +  ALL+ HE R
Sbjct: 91  KGYIDILAACGNSIPEDDQILHILGGVGPEYESVVVHVTSRVESLSLSEVGALLLAHEGR 150

Query: 160 LEAKAMSIESVHPVANVHIQHSSPSFKDNNSHQQSNNGNQ-----RGRGRSGNNRGGRSN 219
           +E         + +   H    S +     S +++ N +Q     RGRGR  N RGGR  
Sbjct: 151 IE--------TYNITGGHTASPSVNVTTAPSQRKAENTSQSQPVYRGRGRGRNGRGGRKP 210

Query: 220 LNNRNKLQCYHCGCYGYTTNRCYYINDFSQQHPRYSPRAPKENQVTVPQSMMYGSMGYQI 279
            +N  +  C  CG  G+    CYY  D       + P++   ++ T  Q     S  Y  
Sbjct: 211 WHNNGRPVCQICGIPGHVAEICYYRFD-----KEFVPKSSGVSR-TSQQQFNRSSPSYPP 270

Query: 280 QHVAQLANLPHASYGQDPNWYPDPGATNHLTNNMGNLSVSSEYQGNNQVHMGNGACLATT 339
              A       +    +  WYPD GA++H+TN++GNLSVSSEY G ++V +GNGA L+ +
Sbjct: 271 SAFAS----TKSESASEEWWYPDSGASHHVTNDLGNLSVSSEYTGGSKVQVGNGAGLSIS 330

Query: 340 HCGYGSI--MSSNRVFHLNDLLHVPTITKNLISVSQFARDNSVYFKFHPSYCLVKDRASN 399
           + G  ++    S+R F L +LLHVP ITKNLISVS+FA DN VYF+FHPS+CLVKD A++
Sbjct: 331 NIGESNLNMFPSSRPFLLKNLLHVPLITKNLISVSKFAYDNHVYFEFHPSFCLVKDPATH 390

Query: 400 QELLRGTLHNGLYRFDLNSHVQNPTSHVSNVVEYSLPYSNSVVSNSPSNGSIINNTLDVW 459
             LLRGTLHNGLYRF+L S +  P    + +     P    V   SP    +  NTLD W
Sbjct: 391 VVLLRGTLHNGLYRFNLKSRISGPLHSPACLQSSVSPI--KVPDQSPL--CLPQNTLDKW 450

Query: 460 HRRLGHPSLSTFQSIVKNCMPSLLHCSNKSSFCDVCALGKNHALPFSKISYSLHQTF 510
           H RLGHPS++T + ++ +C   +    N  SFC  C LGKNH LPF + + +    F
Sbjct: 451 HLRLGHPSIATVKQVLLDCNERISKNDN-ISFCSSCQLGKNHLLPFPQSTTNFSAPF 484

BLAST of Sed0021821 vs. ExPASy TrEMBL
Match: A0A438FJP6 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_1134 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 7.4e-64
Identity = 176/499 (35.27%), Postives = 268/499 (53.71%), Query Frame = 0

Query: 40  SKIGSSILEKMLHYKTAKDIWVCLSQIFNLRNLAQVMKLKSTLQTIKKGGSTLSEYFSKI 99
           S IGS+ L +++   +A ++W  +SQ FN ++ A+VM  KS +Q +KK G T+ +Y +K+
Sbjct: 219 SSIGSAFLPQVVGCSSAFEVWNTISQNFNSQSSAKVMFYKSQMQMLKKDGLTMRDYLTKM 278

Query: 100 KKCVDVLTAVGKLIPLEDHIMYILAGLGLEYDSMVSVITTKICSYTVQDFMALLMTHETR 159
           K   D+L   G  I   DHI+ I+ GLG EY+S+++VI++K  S ++Q   + L+ HE R
Sbjct: 279 KNYCDLLATAGHKISDTDHILAIMQGLGDEYESVIAVISSKKSSPSLQYVTSTLIAHEGR 338

Query: 160 LEAKAMSIE-SVHPVANVHIQHSSPSFKDN---NSHQQSNN---GNQRGRGRSGNNRG-G 219
           +  K  S + SV+  +    +  S S+  N   +S  Q+ N   GNQ  RG   +NRG G
Sbjct: 339 IAHKISSNDLSVNYTSQYSNRGPSSSWNSNGYPSSGFQNRNQFGGNQVTRGSFVHNRGRG 398

Query: 220 RSNLNNRNKLQCYHCGCYGYTTNRCYYINDFSQQHPRYSPRAPKENQVTVPQSMMYGSMG 279
           R       K QC  C  +G+T +RC+Y  D     P +    P       P  +  G+  
Sbjct: 399 RGRAQGGIKPQCQLCNKFGHTVHRCFYRYD-----PNFHGNMPANG--PTPGVLGSGARN 458

Query: 280 YQIQHVAQLANLPHASYGQDPN--------------------WYPDPGATNHLTNNMGNL 339
                ++   N+    Y    N                    W+PD GATNH+T+++GNL
Sbjct: 459 GASGSISSAGNVNLTEYDAQENQDYSEMEAMVATPEDLQNCCWFPDSGATNHVTHDLGNL 518

Query: 340 SVSSEYQGNNQVHMGNGACLATTHCG---YGSIMSSNRVFHLNDLLHVPTITKNLISVSQ 399
           +  +EY GN+++HMGNG  L  +H G   + S  S N+V  L ++L VP I KNL+SVSQ
Sbjct: 519 NSGAEYNGNSKIHMGNGTGLKISHIGLSVFPSSSSPNKVLFLKNILRVPAIKKNLLSVSQ 578

Query: 400 FARDNSVYFKFHPSYCLVKDRASNQELLRGTLHNGLYRFDLNSHVQNPTSHVS------- 459
           FARDN+VYF+FHP  C VKD++++  LL+G LH GLY+F+L+  +    S +S       
Sbjct: 579 FARDNNVYFEFHPKVCFVKDKSNHSLLLQGNLHKGLYQFNLSKKLFGKASGLSLSNDKNE 638

Query: 460 -NVVEYSLPYSNSVVSNSPSNGSIINNTLDVWHRRLGHPSLSTFQSIVK-NCMPSLLHCS 499
                 SL ++++  S+ P   +   +  D+WH+RLGHP+      ++  N +P      
Sbjct: 639 LTCCNASLVHNDN--SDFPEKTNSSFHVFDLWHKRLGHPASKIVTQVLNDNKIP--FSTK 698

BLAST of Sed0021821 vs. ExPASy TrEMBL
Match: A5BFT3 (Integrase catalytic domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_017741 PE=4 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 1.2e-61
Identity = 181/504 (35.91%), Postives = 260/504 (51.59%), Query Frame = 0

Query: 63  LSQIFNLRNLAQVMKLKSTLQTIKKGGSTLSEYFSKIKKCVDVLTAVGKLIPLEDHIMYI 122
           L Q F  +  A+  + K+ LQ  KKGGST+ EY +KIK CVD L +VG  +  +DH+  I
Sbjct: 109 LEQYFASQTRAKAKQFKTQLQHTKKGGSTIDEYLAKIKVCVDSLASVGVSLSTKDHVESI 168

Query: 123 LAGLGLEYDSMVSVITTKICSYTVQDFMALLMTHETRLEAKAMSIESVHPVANVHIQHSS 182
           L GL  +Y+S V+ +  +   ++V++  ALLM HE+R+E    S++S     + H+  S+
Sbjct: 169 LDGLPNDYESFVTSVILRNDDFSVEEIEALLMAHESRVEKNNNSLDS---SPSAHVASSN 228

Query: 183 PSFKDNN--------SHQQSNNGNQRGRGRSGN---------------NRGGRSNL---- 242
              K N         + Q S++G   G GR G+               N  GRSN     
Sbjct: 229 AVEKGNRFKQDYYAANSQGSHSGYNGGFGRGGDFGRRGGFYGGRGFNWNYNGRSNRGGFR 288

Query: 243 -----------------NNRNKLQCYHCGCYGYTTNRCYYINDFSQQHPR------YSPR 302
                            N   K  C  CG  G+   +CYY  D + Q P+       SPR
Sbjct: 289 GRGNKGSFQARPPWNSDNQNEKPACQLCGKIGHVVAQCYYRFDHTFQVPQNLSSRNSSPR 348

Query: 303 APKENQVTVPQSMMYGSMGYQIQHVAQLANLPHASYGQDPNWYPDPGATNHLTNNMGNLS 362
           A             Y S   Q+  V     +P +    D NWYPD GA+NH+T N  NL 
Sbjct: 349 A-------------YYSFSPQVNGV-----IPTSEVFSDDNWYPDSGASNHVTPNPENLM 408

Query: 363 VSSEYQGNNQVHMGNGACLATTHCGYGSIMS--SNRVFHLNDLLHVPTITKNLISVSQFA 422
            S+E+ G NQVH+GNG  L+  H G    +S  S++   LN LLHVP+ITKNL+SVS+FA
Sbjct: 409 KSAEFAGQNQVHVGNGTGLSIKHIGQSEFLSPFSSKPLLLNHLLHVPSITKNLLSVSKFA 468

Query: 423 RDNSVYFKFHPSYCLVKDRASNQELLRGTLHNGLYRFDLNSHVQNPTSHVSNVVEYSLPY 482
           +DN V+F+FH   C VKD+ +   L+ G + +GLY FD        +SH++     SL  
Sbjct: 469 KDNKVFFEFHSDSCFVKDQVTQAVLMVGKVRDGLYAFD--------SSHLALRPTQSLSK 528

Query: 483 SNSVVSNSPSN---GSIINNTLDVWHRRLGHPSLSTFQSIVKNCMPSLLHCSN-KSSFCD 511
           S SVV++S S+    + +++T D+WH+RLGHPS +T ++++  C  ++ H +   S+FC 
Sbjct: 529 SPSVVASSFSSKVCTTSLSSTFDLWHKRLGHPSAATIKNVLSKC--NVAHINKMDSNFCS 577

BLAST of Sed0021821 vs. TAIR 10
Match: AT5G48050.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G34070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 53.1 bits (126), Expect = 8.2e-07
Identity = 51/171 (29.82%), Postives = 89/171 (52.05%), Query Frame = 0

Query: 55  TAKDIWVCLSQIFNLRNLAQVMKLKSTLQTIKKGGSTLSEYFSKIKKCVDVLTAVGKLIP 114
           TA+D+W+ L  +F     A+ ++ ++ L+T      ++ EY  K+K   D+LT V   I 
Sbjct: 96  TARDLWLSLENLFRDNKEARALQFENELRTTTIDDLSVHEYCQKLKSLSDLLTNVDSPIS 155

Query: 115 LEDHIMYILAGLGLEYDSMVSVITTKICSYTVQDFMALLMTHETRLEAKAMS--IESVHP 174
               +M++L GL  +YD +++VI  K    +  +  ++L+  E+RL  K+ S    + HP
Sbjct: 156 DRVLVMHLLNGLTEKYDYILNVIKHKSPFPSFTEARSMLLMEESRLSNKSKSSLSHTNHP 215

Query: 175 VANVHIQHSSPSFKDNNSHQQSNNGNQRGRGRS-GNNRGGRSN---LNNRN 220
             + ++  + P  ++    +  NN +  GRGRS   NRGG S+    NN N
Sbjct: 216 SLS-NVLFTVPRQQERYPQEYHNNNSNMGRGRSKKKNRGGGSSDGRYNNNN 265

BLAST of Sed0021821 vs. TAIR 10
Match: AT1G34070.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G48050.1); Has 648 Blast hits to 647 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 16; Fungi - 25; Plants - 607; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 51.2 bits (121), Expect = 3.1e-06
Identity = 60/206 (29.13%), Postives = 97/206 (47.09%), Query Frame = 0

Query: 24  VMLILRSQIWPIQHRRSKIGSSILEKMLHYKTAKDIWVCLSQIFNLRNLAQVMKLKSTLQ 83
           V L L   + P Q + S + SS         T++DIW+ +   F     A+ ++L S L+
Sbjct: 72  VKLSLYGTLTPKQFQGSFVTSS---------TSRDIWLRIKNQFRNNKDARALRLDSELR 131

Query: 84  TIKKGGSTLSEYFSKIKKCVDVLTAVGKLIPLEDHIMYILAGLGLEYDSMVSVITTKICS 143
           T   G   +++Y+ K+KK  D L  V   +   + +MY+L GL  ++D++++VI  +   
Sbjct: 132 TKDIGDMRVADYYRKMKKLADSLRNVDVPVTDRNLVMYVLNGLNPKFDNIINVIKHRQPF 191

Query: 144 YTVQDFMALLMTHETRLEAKAMSIESVHPVANVHIQHSSPSF------KDNNSHQQSNNG 203
            +  D   +L   E RL+       ++ P    H+ HSS S           ++ Q + G
Sbjct: 192 PSFDDAATMLQEEEDRLK------RAIKP-NPTHVDHSSSSTVLACSEAPPVTNFQRSGG 251

Query: 204 NQ---RGRGRSGN---NRGGRSNLNN 218
           NQ   RGRGR  N    RGGR +  N
Sbjct: 252 NQMGYRGRGRGNNIFRGRGGRFSYYN 261