Sed0021791 (gene) Chayote v1

Overview


Name	Sed0021791
Type	gene
Organism	Sechium edule (Chayote v1)
Description	zinc finger CCCH domain-containing protein 12-like isoform X1
Location	LG05: 1923984 .. 1928405 (-)
RNA-Seq Expression	Sed0021791
Synteny	Sed0021791

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATCTTCGAATCCTACTTTTCTTATCTATTTTTCCTTCACTTTTTAAAGCCCAAACCTTGATTTTCGCCCGCTTGTTCTAATTTTTCCCTTTCAGTAATTCTTGTGATTCTTAACAGATCTGCCCGATCTTCCCACTAACTTCATCTCCTCTTCGATCTTTCTTCATTTCTCCAGATTTCGTTTTAACCCTTAAATCTTTCACTGAACTGATGTTCTTTCTCGAAAAACCCCATTTCCCATATGGATTTCAAATCTTCATACCCTCTTGTGTGATTCAGTGCCCGTGTTTTTTGAAATTAGGGTTTCATTTGTTGTAATTTGATGATTTTGTAGCTCTCTGGAGGTAAGGATTTGTGGGTTTTTGTTTGGAATGGATTACAGTGGGGGAAATGTAGTCCATGTGATCCCCGAGAATTGGCCCGGCGAAGTTTGGGCAACTGAAGATGAGTACAGAGCTTGGAACAATGGCGGGGATGGGTCTGGCGATACGCCTTCGAATTCGAGCTTTGATCAAAGGCAATCCCAAAGCCGGTCTGGAAGCGAACCGCCGAACAAGAAATCGAGAGGCTCCCAGGATGTTACGTCCTCGAATCGATCGAAAGCGATCGGTAAAATGTTCTTCAAGACCAAACTGTGCTGCAAATTCCGCGCTGGAACATGCCCTTACATTACTAATTGTAATTTTGCTCATAGCATTGAGGAGCTTAGGCGCCCACCACCGAATTGGCAGGTATTACGGTTTGTTCTTAGTTAATAATTAACGTTTGTTATTTGCTCTGTTTAGTTGTTAGCTTGATAGCTGAATATCTTTAGTTGGGTAGCTTAGTTTGTTCATTAGCTGATAGTATAACCGGGGGGTTTACAAAAAAAAAACCAACAACCCAAGCAATCCAAACTACAACCAGAGTTCAAATTTGATAATTTTCTTTGGGTTAGAAGGTTTTAGGGTTGGACAATTTTTGGATAGGTTAAACCAAACCCAACCCAAACTGAACTATGAATAATGTTGATATATGTGTTTGATTAATAAGATAGATTCTTTGAATATTGGTAGGAAACATGCATCATTAAGATAAATAACTTGGGATATATATATATTCGTGATTGTCTGGGCCAGCTTGCGCACACCTCGAATAATGTCATGGGCACACTATCTGACCCTACAACATTTGGATGTCAAGAAAACTCGTAGGGAATTAATTCCTAAGTAGGTAGCCACCATGGATTGAACTCATTACCTTAAGCATCCCAAGACCCACTTTGACCATTTGAGTCACTCCATGATGATTCACTGGACAAGCTTTTTGTAAATGGATGGACAATATCTAATCTATATTCTTATGTAATTGTTCATTGATCAAGGAAATTTATCGTTTTCTATAAAAAAAAAATAATAATAAAAATAAAAAATGTTGGACAAACCATCTTGGATTGACCTTGTAGTCAAAAGGGTGTCGGAGAACTTAGAGATGAAAGGTTCAATCTATGGTGATCACCTACCTAGGAATTTCCTATGGGTTCAATCCACATTGTAAGGTCAAGCGGTATACCTCTTGACATAGTCGTGCCGCGTGCAAGTTGGCTCAGATAATCATAGATATATATATAAAAAAAAATGTATGCATAGGTTGGGCAGGCCGGCAGATTGACCAACTTGTAAGTTTAGGTGGATCCAAAAAAATTCTCCTAACTCAGGCTCGCACGCTCAAGGTACCCTAGTGCCTTGCCTTACTGAGCTTAGGTAAAAATGCCCCTGGCTTCCTGTGGTTTATTGTAAAAGAATAAATTTACCAACCCAACACAAAAATATTTTATTTTAGTTTTTCTGTGGTTCTTTATGAACTAAAAAAATAACATTTATCAACTCGGAGTATTTTCTTAGTATTCACTTTTTTATGAATGTTTATATATAGTACTTCTCAGCCTTGCACTCCTTGAGCAAGAACACTGATTACAGCTATATACTGGTGTTTATGCTTGCTTCTGTACATGGAATAGGATTAATAGAATGTCATGAGTTTCTCATTGCAATGAGCATTGTCAGCAGGAAATTGTGGCCGCCCATGAGGAAGACAGGGGGTTATTTTCAGAGCCAAGGGAGGAATTTCAGATTCCTTCACTTGGAGCATCGAATTTTGGTTCCGAGTCACAAAGGTCATATAAAGGTCGACATTGCAAGAAGTTTTACACCGAGGAGGGTTGTCCATACGGGGATAGTTGTACATTTCTTCACGATGAGCAGTCAAAGAATCGAGAGAGTGTGGCAATCAGCTTGGGTCCTGGTGGGTATAGTGGTGGCGGATCGGGAAATGGATCGAACACCAAGCCTTCAAATTGGAAAACAAGGATTTGTAATAAGTGGGAGATGACGGGATATTGCCCGTTCGGAAACAAATGCCATTTTGCTCATGGTGCTGCTGGTATGTTTCCTCATAGTTTCCTCAACTTTTCCTTTTGTTAATGAAATGGTTGTATCTGGTTCTACATTATAAAGGAAAATGATTCCAAAAAAACAAAACAAAACAAAAATCATGTCTCTCGAAAGTTGTTGGTGTTCTTGGATGAAATCTGCATCAGTTTTACCTTAAGTCACCACTTCTTGGGTTGTTAGTGTAATTTCCATTATCTGTTAAATCACTTAATCTATCGTCACTAAGCACTCTAATTTCCACAGGATACCTGTGCTCAATCTTGCTTAACTTTTGTTTTATTTTGAAAACTAAAGGGTTCCATGTGTAGCTTAAGTTTGTTTCTTTTGTATTCCCACATGAATTTCGCTTTGATTTTTAATCGAACCGTTTTCTCTCCATTTGCCATTTATTGTTCTGTGTTGTTTAGCAATGTAATTTCAACTCTCTCTTTCCGTAAGTGTCTGAACTATTTTATGCGCACCATGACTATTCTCACGGACAAGTGCATGATCCTACTATATATGATTATCGAAGTAACTTGTAGGAAATTAATTTTTAGGTAGATGACCACTATTGATTTAATTTATAGCCTCTTATATCACCTTCTTTTTGACACTAGGGCAACCATGATTGATTTTCCTTCAACTTTCAAGGCTTTCAGATAATGAGATCAATACACTGCAACGATATATTTTTCAGAGTTACTGGGATTGCTCATTTTTTTGCTTTGGGTCTAGAACTCTTCAATTCCAATTTTTTACTCACTTCTAATGAGCAATAGCATAGCAGTGTGAAACTAAAATGACTTTGGGAAATGTGAGGAGAGTTTTGAAGACACTATTATGCTATTGTTCATTCAATACATCTTGCCAATTGAATTTTAGAAAAAACAACAAAGACTTCGTTTTACCTAGGGAGTGTTTTCAATATCTGTAGGTGAGTTTGATCCATGGTAGTCACCTATCTAGAAATTAGTTATTTTCGTGTTTTCTTGGCAACCAAATGCAGTATGATTAAATGGTTTGTTATGTGAAAATAGTCGAGGTGCGTGTAAGTTAGCTCAGACACTCACAAATTATGATTTTCGTGCTTTGTTTTGTTGAGTCACTGGGATTGACCTGAATTTTGATATAGACTTATAGTTTGAGTCAGTTAAATGATTAGACCGATAAACATAAGAATTTTGTTGTCTTGTCGAAGAAAACGAATGTTGGATGAGTTCTTTAGTTTTAGTGATTTTAAATGTATGACTTCGAATTAACCACAGAATTGCACCGTTATGGTGGTGGGCTTATGGAGACAGAAACTAGAGACTCTTCATCGGCTCCTCCTGATCCGAAGCAGGGAGTATTACCGAAAGCTCCGGGTGATACGGTGGTTGCTTTTGCTCCCTCAGTTCCTCATGCAGACGCTTATCATGTTGTGGTTCCATCTCAGAGATCAACCATTGTACTTCAAAGGCCAGGGCAGAGAGCTCATCAGAAATGGAAGGGCCCCGATAAAATCAGTAGGATATACGGTGACTGGATCGATGACAACGAATAATATGATCCAAGCAATCGCTGAACGTGAATAAGGATTTACAGTTCCATAGTTAACAGGCGTCATGATGAGCTTTGTCTCATAAGCATTTGGCAGATGAAGATTCTGTTTGTTCCGGACAAGTTTCGGTTGGTTCTTTTCTTATCCTCGTTTCCAACCCACTTCATTTCCGATCTTCGAATTTCGAAGCATACTGTCTTTTATCCATTAGTGTTGTTATTTCTGTAGTTATGTAATCCTTTTTATTGAAAGAAAAGAGAAAAATGTATGATTGTCACCAGCTTCCCAAATGATCATAGAGTAATTCTTGTGAGTTATGGGATGTCTTTAACCTTATTGTAAAGGGAATATGAGTCCTTCAAATGAGGCAAGCAGCAATTTTTATACACTGACATTGTGATTGCTGAGGATCCCCTGTGTAGATTGATACATTGTTCCCTTTTTGTATAATGTGTTGTAGTTAGCAG

mRNA sequence

AAATCTTCGAATCCTACTTTTCTTATCTATTTTTCCTTCACTTTTTAAAGCCCAAACCTTGATTTTCGCCCGCTTGTTCTAATTTTTCCCTTTCAGTAATTCTTGTGATTCTTAACAGATCTGCCCGATCTTCCCACTAACTTCATCTCCTCTTCGATCTTTCTTCATTTCTCCAGATTTCGTTTTAACCCTTAAATCTTTCACTGAACTGATGTTCTTTCTCGAAAAACCCCATTTCCCATATGGATTTCAAATCTTCATACCCTCTTGTGTGATTCAGTGCCCGTGTTTTTTGAAATTAGGGTTTCATTTGTTGTAATTTGATGATTTTGTAGCTCTCTGGAGGTAAGGATTTGTGGGTTTTTGTTTGGAATGGATTACAGTGGGGGAAATGTAGTCCATGTGATCCCCGAGAATTGGCCCGGCGAAGTTTGGGCAACTGAAGATGAGTACAGAGCTTGGAACAATGGCGGGGATGGGTCTGGCGATACGCCTTCGAATTCGAGCTTTGATCAAAGGCAATCCCAAAGCCGGTCTGGAAGCGAACCGCCGAACAAGAAATCGAGAGGCTCCCAGGATGTTACGTCCTCGAATCGATCGAAAGCGATCGGTAAAATGTTCTTCAAGACCAAACTGTGCTGCAAATTCCGCGCTGGAACATGCCCTTACATTACTAATTGTAATTTTGCTCATAGCATTGAGGAGCTTAGGCGCCCACCACCGAATTGGCAGCAGGAAATTGTGGCCGCCCATGAGGAAGACAGGGGGTTATTTTCAGAGCCAAGGGAGGAATTTCAGATTCCTTCACTTGGAGCATCGAATTTTGGTTCCGAGTCACAAAGGTCATATAAAGGTCGACATTGCAAGAAGTTTTACACCGAGGAGGGTTGTCCATACGGGGATAGTTGTACATTTCTTCACGATGAGCAGTCAAAGAATCGAGAGAGTGTGGCAATCAGCTTGGGTCCTGGTGGGTATAGTGGTGGCGGATCGGGAAATGGATCGAACACCAAGCCTTCAAATTGGAAAACAAGGATTTGTAATAAGTGGGAGATGACGGGATATTGCCCGTTCGGAAACAAATGCCATTTTGCTCATGGTGCTGCTGAAACTAGAGACTCTTCATCGGCTCCTCCTGATCCGAAGCAGGGAGTATTACCGAAAGCTCCGGGTGATACGGTGGTTGCTTTTGCTCCCTCAGTTCCTCATGCAGACGCTTATCATGTTGTGGTTCCATCTCAGAGATCAACCATTGTACTTCAAAGGCCAGGGCAGAGAGCTCATCAGAAATGGAAGGGCCCCGATAAAATCAGTAGGATATACGGTGACTGGATCGATGACAACGAATAATATGATCCAAGCAATCGCTGAACGTGAATAAGGATTTACAGTTCCATAGTTAACAGGCGTCATGATGAGCTTTGTCTCATAAGCATTTGGCAGATGAAGATTCTGTTTGTTCCGGACAAGTTTCGGTTGGTTCTTTTCTTATCCTCGTTTCCAACCCACTTCATTTCCGATCTTCGAATTTCGAAGCATACTGTCTTTTATCCATTAGTGTTGTTATTTCTGTAGTTATGTAATCCTTTTTATTGAAAGAAAAGAGAAAAATGTATGATTGTCACCAGCTTCCCAAATGATCATAGAGTAATTCTTGTGAGTTATGGGATGTCTTTAACCTTATTGTAAAGGGAATATGAGTCCTTCAAATGAGGCAAGCAGCAATTTTTATACACTGACATTGTGATTGCTGAGGATCCCCTGTGTAGATTGATACATTGTTCCCTTTTTGTATAATGTGTTGTAGTTAGCAG

Coding sequence (CDS)

ATGGATTACAGTGGGGGAAATGTAGTCCATGTGATCCCCGAGAATTGGCCCGGCGAAGTTTGGGCAACTGAAGATGAGTACAGAGCTTGGAACAATGGCGGGGATGGGTCTGGCGATACGCCTTCGAATTCGAGCTTTGATCAAAGGCAATCCCAAAGCCGGTCTGGAAGCGAACCGCCGAACAAGAAATCGAGAGGCTCCCAGGATGTTACGTCCTCGAATCGATCGAAAGCGATCGGTAAAATGTTCTTCAAGACCAAACTGTGCTGCAAATTCCGCGCTGGAACATGCCCTTACATTACTAATTGTAATTTTGCTCATAGCATTGAGGAGCTTAGGCGCCCACCACCGAATTGGCAGCAGGAAATTGTGGCCGCCCATGAGGAAGACAGGGGGTTATTTTCAGAGCCAAGGGAGGAATTTCAGATTCCTTCACTTGGAGCATCGAATTTTGGTTCCGAGTCACAAAGGTCATATAAAGGTCGACATTGCAAGAAGTTTTACACCGAGGAGGGTTGTCCATACGGGGATAGTTGTACATTTCTTCACGATGAGCAGTCAAAGAATCGAGAGAGTGTGGCAATCAGCTTGGGTCCTGGTGGGTATAGTGGTGGCGGATCGGGAAATGGATCGAACACCAAGCCTTCAAATTGGAAAACAAGGATTTGTAATAAGTGGGAGATGACGGGATATTGCCCGTTCGGAAACAAATGCCATTTTGCTCATGGTGCTGCTGAAACTAGAGACTCTTCATCGGCTCCTCCTGATCCGAAGCAGGGAGTATTACCGAAAGCTCCGGGTGATACGGTGGTTGCTTTTGCTCCCTCAGTTCCTCATGCAGACGCTTATCATGTTGTGGTTCCATCTCAGAGATCAACCATTGTACTTCAAAGGCCAGGGCAGAGAGCTCATCAGAAATGGAAGGGCCCCGATAAAATCAGTAGGATATACGGTGACTGGATCGATGACAACGAATAA

Protein sequence

MDYSGGNVVHVIPENWPGEVWATEDEYRAWNNGGDGSGDTPSNSSFDQRQSQSRSGSEPPNKKSRGSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPPPNWQQEIVAAHEEDRGLFSEPREEFQIPSLGASNFGSESQRSYKGRHCKKFYTEEGCPYGDSCTFLHDEQSKNRESVAISLGPGGYSGGGSGNGSNTKPSNWKTRICNKWEMTGYCPFGNKCHFAHGAAETRDSSSAPPDPKQGVLPKAPGDTVVAFAPSVPHADAYHVVVPSQRSTIVLQRPGQRAHQKWKGPDKISRIYGDWIDDNE

Homology

[Close]

BLAST of Sed0021791 vs. NCBI nr
Match: XP_023533946.1 (zinc finger CCCH domain-containing protein 12-like isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 636.0 bits (1639), Expect = 1.8e-178
Identity = 302/329 (91.79%), Postives = 311/329 (94.53%), Query Frame = 0


Query: 1   MDYSGGNVVHVIP----ENWPGEVWATEDEYRAWNNGGDGSGDTPSNSSFDQRQSQSRSG 60
           MDY+GGNVVHVIP    ENWPGEVWATEDEYRAWNNG DG  DTPSNSS+DQRQSQSRSG
Sbjct: 1   MDYNGGNVVHVIPGTSSENWPGEVWATEDEYRAWNNGVDGCVDTPSNSSYDQRQSQSRSG 60

Query: 61  SEPPNKKSRGSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPP 120
           SEPPNKKSR SQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPP
Sbjct: 61  SEPPNKKSRSSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPP 120

Query: 121 PNWQQEIVAAHEEDRGLFSEPREEFQIPSLGASNFGSESQRSYKGRHCKKFYTEEGCPYG 180
           PNWQQEIVAAHEE++ +F EPREEFQIPSLG SNFGSESQRSYKGRHCKKFYTEEGCPYG
Sbjct: 121 PNWQQEIVAAHEEEKAVFLEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYG 180

Query: 181 DSCTFLHDEQSKNRESVAISLGPGGYSGGGSGNGSNTKPSNWKTRICNKWEMTGYCPFGN 240
           D CTFLHDEQSKNRESVAISLGPGGYSGGGSGNGSNTKPSNWKTRICNKWE+TGYCPFGN
Sbjct: 181 DGCTFLHDEQSKNRESVAISLGPGGYSGGGSGNGSNTKPSNWKTRICNKWELTGYCPFGN 240

Query: 241 KCHFAHGAAETRDSSSAPPDPKQGVLPKAPGDTVVAFAPSVPHADAYHVVVPSQRSTIVL 300
           KCHFAHGAAETRDSSSAPPD KQGVLPKAPGDTVVA  PSVPH+D YHVV+PSQRSTIV+
Sbjct: 241 KCHFAHGAAETRDSSSAPPDQKQGVLPKAPGDTVVASVPSVPHSDVYHVVIPSQRSTIVI 300

Query: 301 QRPGQRAHQKWKGPDKISRIYGDWIDDNE 326
           QR GQR HQKWKGPDKISRIYGDWIDDNE
Sbjct: 301 QRSGQRTHQKWKGPDKISRIYGDWIDDNE 329

[Close]

BLAST of Sed0021791 vs. NCBI nr
Match: XP_022930985.1 (zinc finger CCCH domain-containing protein 12-like isoform X3 [Cucurbita moschata])

HSP 1 Score: 635.6 bits (1638), Expect = 2.4e-178
Identity = 302/329 (91.79%), Postives = 311/329 (94.53%), Query Frame = 0


Query: 1   MDYSGGNVVHVIP----ENWPGEVWATEDEYRAWNNGGDGSGDTPSNSSFDQRQSQSRSG 60
           MDY+GGNVVHVIP    ENWPGEVWATEDEYRAWNNG DG  DTPSNSS+DQRQSQSRSG
Sbjct: 1   MDYNGGNVVHVIPGTSSENWPGEVWATEDEYRAWNNGVDGFVDTPSNSSYDQRQSQSRSG 60

Query: 61  SEPPNKKSRGSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPP 120
           SEPPNKKSR SQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPP
Sbjct: 61  SEPPNKKSRSSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPP 120

Query: 121 PNWQQEIVAAHEEDRGLFSEPREEFQIPSLGASNFGSESQRSYKGRHCKKFYTEEGCPYG 180
           PNWQQEIVAAHEE++ +F EPREEFQIPSLG SNFGSESQRSYKGRHCKKFYTEEGCPYG
Sbjct: 121 PNWQQEIVAAHEEEKAVFLEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYG 180

Query: 181 DSCTFLHDEQSKNRESVAISLGPGGYSGGGSGNGSNTKPSNWKTRICNKWEMTGYCPFGN 240
           D CTFLHDEQSKNRESVAISLGPGGYSGGGSGNGSNTKPSNWKTRICNKWE+TGYCPFGN
Sbjct: 181 DGCTFLHDEQSKNRESVAISLGPGGYSGGGSGNGSNTKPSNWKTRICNKWELTGYCPFGN 240

Query: 241 KCHFAHGAAETRDSSSAPPDPKQGVLPKAPGDTVVAFAPSVPHADAYHVVVPSQRSTIVL 300
           KCHFAHGAAETRDSSSAPPD KQGVLPKAPGDTVVA  PSVPH+D YHVV+PSQRSTIV+
Sbjct: 241 KCHFAHGAAETRDSSSAPPDQKQGVLPKAPGDTVVASVPSVPHSDVYHVVIPSQRSTIVI 300

Query: 301 QRPGQRAHQKWKGPDKISRIYGDWIDDNE 326
           QR GQR HQKWKGPDKISRIYGDWIDDNE
Sbjct: 301 QRSGQRTHQKWKGPDKISRIYGDWIDDNE 329

[Close]

BLAST of Sed0021791 vs. NCBI nr
Match: XP_022995984.1 (zinc finger CCCH domain-containing protein 12-like isoform X3 [Cucurbita maxima])

HSP 1 Score: 634.8 bits (1636), Expect = 4.1e-178
Identity = 301/329 (91.49%), Postives = 311/329 (94.53%), Query Frame = 0


Query: 1   MDYSGGNVVHVIP----ENWPGEVWATEDEYRAWNNGGDGSGDTPSNSSFDQRQSQSRSG 60
           MDY+GGNVVHVIP    ENWPGEVWATEDEYRAWNNG DG  DTPSNSS+DQRQSQSRSG
Sbjct: 1   MDYNGGNVVHVIPGTSSENWPGEVWATEDEYRAWNNGVDGCVDTPSNSSYDQRQSQSRSG 60

Query: 61  SEPPNKKSRGSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPP 120
           SEPPNKKSR SQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPP
Sbjct: 61  SEPPNKKSRSSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPP 120

Query: 121 PNWQQEIVAAHEEDRGLFSEPREEFQIPSLGASNFGSESQRSYKGRHCKKFYTEEGCPYG 180
           PNWQQEIVAAHEE++ +F EPREEFQIPSLG SNFGSESQRSYKGRHCKKFYTEEGCPYG
Sbjct: 121 PNWQQEIVAAHEEEKAVFLEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYG 180

Query: 181 DSCTFLHDEQSKNRESVAISLGPGGYSGGGSGNGSNTKPSNWKTRICNKWEMTGYCPFGN 240
           D CTFLHDEQSKNRESVAISLGPGGYSGGGSGNGSNTKPSNWKTRICNKWE+TGYCPFGN
Sbjct: 181 DGCTFLHDEQSKNRESVAISLGPGGYSGGGSGNGSNTKPSNWKTRICNKWELTGYCPFGN 240

Query: 241 KCHFAHGAAETRDSSSAPPDPKQGVLPKAPGDTVVAFAPSVPHADAYHVVVPSQRSTIVL 300
           KCHFAHGAAETRDSSSAPPD KQGVLPKAPGDTVVA  PSVPH+D YHV++PSQRSTIV+
Sbjct: 241 KCHFAHGAAETRDSSSAPPDQKQGVLPKAPGDTVVASVPSVPHSDVYHVMIPSQRSTIVI 300

Query: 301 QRPGQRAHQKWKGPDKISRIYGDWIDDNE 326
           QR GQR HQKWKGPDKISRIYGDWIDDNE
Sbjct: 301 QRSGQRTHQKWKGPDKISRIYGDWIDDNE 329

[Close]

BLAST of Sed0021791 vs. NCBI nr
Match: KAG6606260.1 (Zinc finger CCCH domain-containing protein 12, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036201.1 Zinc finger CCCH domain-containing protein 12, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 629.4 bits (1622), Expect = 1.7e-176
Identity = 301/329 (91.49%), Postives = 310/329 (94.22%), Query Frame = 0


Query: 1   MDYSGGNVVHVIP----ENWPGEVWATEDEYRAWNNGGDGSGDTPSNSSFDQRQSQSRSG 60
           MDY+GGNVVHVIP    ENWPGEVWATEDEYRAWNNG DG  DTPSNSS+DQRQSQSRSG
Sbjct: 1   MDYNGGNVVHVIPGTSSENWPGEVWATEDEYRAWNNGVDGCVDTPSNSSYDQRQSQSRSG 60

Query: 61  SEPPNKKSRGSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPP 120
           SEPPNKKSR SQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPP
Sbjct: 61  SEPPNKKSRSSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPP 120

Query: 121 PNWQQEIVAAHEEDRGLFSEPREEFQIPSLGASNFGSESQRSYKGRHCKKFYTEEGCPYG 180
           PNW QEIVAAHEE++ +F EPREEFQIPSLG SNFGSESQRSYKGRHCKKFYTEEGCPYG
Sbjct: 121 PNW-QEIVAAHEEEKAVFLEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYG 180

Query: 181 DSCTFLHDEQSKNRESVAISLGPGGYSGGGSGNGSNTKPSNWKTRICNKWEMTGYCPFGN 240
           D CTFLHDEQSKNRESVAISLGPGGYSGGGSGNGSNTKPSNWKTRICNKWE+TGYCPFGN
Sbjct: 181 DGCTFLHDEQSKNRESVAISLGPGGYSGGGSGNGSNTKPSNWKTRICNKWELTGYCPFGN 240

Query: 241 KCHFAHGAAETRDSSSAPPDPKQGVLPKAPGDTVVAFAPSVPHADAYHVVVPSQRSTIVL 300
           KCHFAHGAAETRDSSSAPPD KQGVLPKAPGDTVVA  PSVPH+D YHVV+PSQRSTIV+
Sbjct: 241 KCHFAHGAAETRDSSSAPPDQKQGVLPKAPGDTVVASVPSVPHSDVYHVVIPSQRSTIVI 300

Query: 301 QRPGQRAHQKWKGPDKISRIYGDWIDDNE 326
           QR GQR HQKWKGPDKISRIYGDWIDDNE
Sbjct: 301 QRSGQRTHQKWKGPDKISRIYGDWIDDNE 328

[Close]

BLAST of Sed0021791 vs. NCBI nr
Match: XP_008465990.1 (PREDICTED: zinc finger CCCH domain-containing protein 12 isoform X3 [Cucumis melo])

HSP 1 Score: 629.4 bits (1622), Expect = 1.7e-176
Identity = 303/337 (89.91%), Postives = 312/337 (92.58%), Query Frame = 0


Query: 1   MDYSGGNVVHVI----PENWPGEVWATEDEYRAWNNGGDGSGDTPSNSSFDQRQSQSRSG 60
           MDYSGGNVVHVI     ENWPGEVWATEDEYRAWNNGGDGS DTPSNSS+DQRQSQSRSG
Sbjct: 1   MDYSGGNVVHVISGTSSENWPGEVWATEDEYRAWNNGGDGSVDTPSNSSYDQRQSQSRSG 60

Query: 61  SEPPNKKSRGSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPP 120
           SEPPNKKSR SQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNF HSIEELRRPP
Sbjct: 61  SEPPNKKSRSSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFGHSIEELRRPP 120

Query: 121 PNWQQEIVAAHEEDRGLFSEPREEFQIPSLGASNFGSESQRSYKGRHCKKFYTEEGCPYG 180
            NWQQEIVAAHEE++ + SEPREEFQIPSLG SNFGSESQRSYKGRHCKKFYTEEGCPYG
Sbjct: 121 HNWQQEIVAAHEEEKAVLSEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYG 180

Query: 181 DSCTFLHDEQSKNRESVAISLGPGGYS--------GGGSGNGSNTKPSNWKTRICNKWEM 240
           DSCTFLHDEQSKNRESVAISLGPGGYS        GGGSGNGSNTKPSNWKTRICNKWE+
Sbjct: 181 DSCTFLHDEQSKNRESVAISLGPGGYSGGGGGGGGGGGSGNGSNTKPSNWKTRICNKWEL 240

Query: 241 TGYCPFGNKCHFAHGAAETRDSSSAPPDPKQGVLPKAPGDTVVAFAPSVPHADAYHVVVP 300
           TGYCPFGNKCHFAHGAAETRDSS+APPDPKQGVLPKAPGDT+VA  PSVPH+D YHVVVP
Sbjct: 241 TGYCPFGNKCHFAHGAAETRDSSAAPPDPKQGVLPKAPGDTLVASVPSVPHSDVYHVVVP 300

Query: 301 SQRSTIVLQRPGQRAHQKWKGPDKISRIYGDWIDDNE 326
           SQRSTIV+QRPGQR HQKWKGPDKISRIYGDWIDD E
Sbjct: 301 SQRSTIVIQRPGQRTHQKWKGPDKISRIYGDWIDDIE 337

[Close]

BLAST of Sed0021791 vs. ExPASy Swiss-Prot
Match: Q9LQM3 (Zinc finger CCCH domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=At1g32360 PE=2 SV=1)

HSP 1 Score: 389.8 bits (1000), Expect = 3.0e-107
Identity = 230/395 (58.23%), Postives = 252/395 (63.80%), Query Frame = 0


Query: 4   SGGNVVHVIPENWP-----------GEVWATEDEY-RAWNNGGDGSGDTPSNSSFDQRQS 63
           SGG+VVHVIP N P             VWATED+Y RAW          P N+S D    
Sbjct: 8   SGGDVVHVIPTNNPPPDNWFPNLGDSAVWATEDDYNRAW-------AMNPDNTSGD---- 67

Query: 64  QSRSGSEPPNKKSRGSQDVTS-------SNRSKAIGKMFFKTKLCCKFRAGTCPYITNCN 123
                + PPNKK+RGS   +S       SNR+KAIGKMFFKTKLCCKFRAGTCPYITNCN
Sbjct: 68  ----NNGPPNKKTRGSPSSSSATTTSAASNRTKAIGKMFFKTKLCCKFRAGTCPYITNCN 127

Query: 124 FAHSIEELRRPPPNWQQEIVAAHEEDR---------GLFSEPREEFQIPSLGASNFGSES 183
           FAH++EELRRPPPNW QEIVAAHEE+R          +   PREEFQIPSL +S   +ES
Sbjct: 128 FAHTVEELRRPPPNW-QEIVAAHEEERSGGMGTPTVSVVEIPREEFQIPSLVSST--AES 187

Query: 184 QRSYKGRHCKKFYTEEGCPYGDSCTFLHDEQSKNRESVAISLGPGGY------------- 243
            RS+KGRHCKKFYTEEGCPYG+SCTFLHDE S+NRESVAISLGPGGY             
Sbjct: 188 GRSFKGRHCKKFYTEEGCPYGESCTFLHDEASRNRESVAISLGPGGYGSGGGGGSGGGSV 247

Query: 244 -------------SGGGSGNGSN---TKPSNWKTRICNKWEMTGYCPFGNKCHFAHGAAE 303
                         GGGSG+GS     KPSNWKTRICNKWE+TGYCPFG KCHFAHGAAE
Sbjct: 248 GGGGSSSNVVVLGGGGGSGSGSGIQILKPSNWKTRICNKWEITGYCPFGAKCHFAHGAAE 307

Query: 304 T------------RDSSSAPPDPKQGVL-PKAPGDTVVAFAPSVPH-ADA-YHVVVPSQR 326
                        +D  S  PD KQ V  PK   DT    +P VPH ADA YH  V  QR
Sbjct: 308 LHRFGGGLVEEEGKDGVSPNPDTKQTVQNPKGLSDTTTLLSPGVPHNADASYHTGVALQR 367

[Close]

BLAST of Sed0021791 vs. ExPASy Swiss-Prot
Match: Q84UQ3 (Zinc finger CCCH domain-containing protein 56 OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0159800 PE=4 SV=1)

HSP 1 Score: 372.1 bits (954), Expect = 6.5e-102
Identity = 217/388 (55.93%), Postives = 250/388 (64.43%), Query Frame = 0


Query: 1   MDYSGGNVVHVI-----PENWPGE--------VWATEDEYRA-WNNGGDGSGDTPSNSSF 60
           MDY+  N +H+I     P+ W           +WATED+Y + WN  G G G        
Sbjct: 1   MDYT--NAIHIIPDAAGPDAWANAAAQGGDAGIWATEDDYNSQWNADGGGGG-------- 60

Query: 61  DQRQSQSRSGSE--PPNKKSR---GSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYIT 120
                 SR+GSE  PP KKSR   G +   ++++S+AIGKMFFKTKLCCKFRAGTCPY+T
Sbjct: 61  -----SSRAGSEQPPPGKKSRGGGGGEGGGNTSKSRAIGKMFFKTKLCCKFRAGTCPYVT 120

Query: 121 NCNFAHSIEELRRPPPNWQQEIVAAHEEDRGLFSEPREEFQIPSLGAS------------ 180
           NCNFAH +EELR+PPPNW QEIVAAHEE     +E REE QIP + +S            
Sbjct: 121 NCNFAHGMEELRKPPPNW-QEIVAAHEE----ATEAREEHQIPIMTSSGPTAGGDAGCGG 180

Query: 181 NFGSESQRSYKGRHCKKFYTEEGCPYGDSCTFLHDEQSKNRESVAISLGP--GGYSGGGS 240
             G  S R+YKGRHCKKFYT+EGCPYGD+CTFLHDEQSK RESVAISL P  GG  GGGS
Sbjct: 181 GGGGGSGRAYKGRHCKKFYTDEGCPYGDACTFLHDEQSKARESVAISLSPSVGGGGGGGS 240

Query: 241 ---------------GNGSNTKPSNWKTRICNKWEMTGYCPFGNKCHFAHGAAE------ 300
                          GNG   KPSNWKTRICNKWEMTGYCPFG+KCHFAHGAAE      
Sbjct: 241 YNSAAAAAASASAAAGNGPMQKPSNWKTRICNKWEMTGYCPFGSKCHFAHGAAELHKYGG 300

Query: 301 ------TRDSSSAPPDPKQGVL-PKAPGDTVVAFAPSVPHADAYHVVVPSQRSTIVLQRP 326
                 +RD ++A PD KQ V+  KAP +T  A    +PHAD YH+ V +QRSTI  QR 
Sbjct: 301 GLVDIDSRD-AAATPDSKQAVVSAKAPAETAAASTTVLPHADVYHLGVQAQRSTIAGQRS 360

[Close]

BLAST of Sed0021791 vs. ExPASy Swiss-Prot
Match: Q5PP65 (Zinc finger CCCH domain-containing protein 28 OS=Arabidopsis thaliana OX=3702 GN=At2g35430 PE=1 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 6.8e-43
Identity = 134/355 (37.75%), Postives = 160/355 (45.07%), Query Frame = 0


Query: 2   DYSGGNVVHV-----------IPENWPGEVWATEDEY-RAWNNGGDGSGDTPSNSSFDQR 61
           DY G + VHV            P +    VWATED+Y R W    D              
Sbjct: 6   DY-GSDAVHVRITHDPPPENCFPNSGDSSVWATEDDYSRVWAINSD-------------- 65

Query: 62  QSQSRSGSEPPNKKSRGSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPY-ITNCNFAHS 121
                 G+E P+KK+R       S+ S  IGK FFKTKLC KFRAGTCPY  ++C+FAHS
Sbjct: 66  ------GAESPSKKTR-------SSSSSEIGKSFFKTKLCFKFRAGTCPYSASSCHFAHS 125

Query: 122 IEELR---RPPPNWQQEIVAAHEEDRGLFSEPREEFQIPSLGASNFGSESQRSYKGRHCK 181
            EELR    PPPNWQ+ +                                          
Sbjct: 126 AEELRLPPPPPPNWQETVT----------------------------------------- 185

Query: 182 KFYTEEGCPYGDSCTFLHDEQSKNRESVAISLGPGGYSGGGSGNGSNT-KPSNWKTRICN 241
                              E S+NRES A+SLGP        GN + T K  NWKTRICN
Sbjct: 186 -------------------EASRNRESFAVSLGP-------RGNVAQTLKSPNWKTRICN 245

Query: 242 KWEMTGYCPFGNKCHFAHGAA------------ETRDSSSAPPDPKQGVLPKAPGDTVVA 301
           KW+ TGYCPFG+ CHFAHG +            E +  +SA  D KQ    +   DTV +
Sbjct: 246 KWQTTGYCPFGSHCHFAHGPSELHTFGGGLVEGECKIGTSATLDTKQ----RGQVDTVTS 252

Query: 302 FAPSVPHADAYHVVVPSQR-STIVLQRP-GQRAHQKWKGPDKISRIYGDWIDDNE 326
                         V SQR S+ V Q+P G R  +KWKGPDKISR+YGDWIDD E
Sbjct: 306 LVSP---------GVSSQRTSSAVTQKPNGVRTQRKWKGPDKISRVYGDWIDDIE 252

[Close]

BLAST of Sed0021791 vs. ExPASy Swiss-Prot
Match: Q9LT81 (Zinc finger CCCH domain-containing protein 39 OS=Arabidopsis thaliana OX=3702 GN=At3g19360 PE=2 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 1.2e-36
Identity = 105/282 (37.23%), Postives = 137/282 (48.58%), Query Frame = 0


Query: 76  SKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPPPNWQQEIVAAHE--EDRGL 135
           +K    +F+KT++C KFRAGTC     CNFAH IE+LR+PP NW QEIV      +DR  
Sbjct: 97  NKGTANIFYKTRMCAKFRAGTCRNGELCNFAHGIEDLRQPPSNW-QEIVGPPPAGQDRER 156

Query: 136 FSEPREEFQIPSLGA---SNFGSESQRSYKGRHCKKFYTEEGCPYGDSCTFLHDEQS--- 195
             E   E + PSL     +N+  + +   + + C+KF   E CPYGD C F+H++ S   
Sbjct: 157 ERERERERERPSLAPVVNNNWEDDQKIILRMKLCRKFCFGEECPYGDRCNFIHEDLSKFR 216

Query: 196 ----KNRESVAISLG------PGGYSGG-------GS-------GNGSNTKPSNWKTRIC 255
               K RES  IS+G      P   +         GS        NG   K   WKTR+C
Sbjct: 217 EDSGKLRESSVISVGATAADQPSDTASNLIEVNRQGSIPVPAPMNNGGVVKTVYWKTRLC 276

Query: 256 NKWEMTGYCPFGNKCHFAHGAAETRDSSSAPPDPKQGVLPKAPGDTVVAFAPSVPHADAY 315
            K+++TG CPFG+KCHFAHG AE  +S           +       VV        A A 
Sbjct: 277 MKFDITGQCPFGDKCHFAHGQAELHNSVGRVEGEAMNAVASVNKQAVV----PANEAFAM 336

Query: 316 HVVVPSQRSTIVLQRPGQRAH--QKWKGPDKISRIYGDWIDD 324
             +      +  L   G+R     KW    KI+RIYGDWIDD
Sbjct: 337 KPITQVTADSSGLNEEGRRKKCLLKWSDSKKINRIYGDWIDD 373

[Close]

BLAST of Sed0021791 vs. ExPASy Swiss-Prot
Match: Q69XQ3 (Zinc finger CCCH domain-containing protein 44 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0618100 PE=2 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 2.6e-10
Identity = 42/114 (36.84%), Postives = 59/114 (51.75%), Query Frame = 0


Query: 147 GASNFGSESQRSYKG-----RHCKKFYTEEGCPYGDSCTFLHD--------EQSKNRESV 206
           GA+     S+ S  G     + C KF++  GCP+G SC FLH+         +  +    
Sbjct: 16  GAAKRARASESSQVGVGSKLKPCTKFFSTSGCPFGSSCHFLHNFPGGYQAAAKMTSHGGT 75

Query: 207 AISLGPGGYS-GGGSGNGSNTKPSNWKTRICNKWEMTGYCPFGNKCHFAHGAAE 247
           A++  PG    G G+ NG  T  S+ KTR+CNK+     C +G+KCHFAHG  E
Sbjct: 76  AVAAPPGRMPLGPGAPNGPPT--SSVKTRMCNKYNTAEGCKWGSKCHFAHGERE 127

[Close]

BLAST of Sed0021791 vs. ExPASy TrEMBL
Match: A0A6J1EYA4 (zinc finger CCCH domain-containing protein 12-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111437313 PE=4 SV=1)

HSP 1 Score: 635.6 bits (1638), Expect = 1.2e-178
Identity = 302/329 (91.79%), Postives = 311/329 (94.53%), Query Frame = 0


Query: 1   MDYSGGNVVHVIP----ENWPGEVWATEDEYRAWNNGGDGSGDTPSNSSFDQRQSQSRSG 60
           MDY+GGNVVHVIP    ENWPGEVWATEDEYRAWNNG DG  DTPSNSS+DQRQSQSRSG
Sbjct: 1   MDYNGGNVVHVIPGTSSENWPGEVWATEDEYRAWNNGVDGFVDTPSNSSYDQRQSQSRSG 60

Query: 61  SEPPNKKSRGSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPP 120
           SEPPNKKSR SQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPP
Sbjct: 61  SEPPNKKSRSSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPP 120

Query: 121 PNWQQEIVAAHEEDRGLFSEPREEFQIPSLGASNFGSESQRSYKGRHCKKFYTEEGCPYG 180
           PNWQQEIVAAHEE++ +F EPREEFQIPSLG SNFGSESQRSYKGRHCKKFYTEEGCPYG
Sbjct: 121 PNWQQEIVAAHEEEKAVFLEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYG 180

Query: 181 DSCTFLHDEQSKNRESVAISLGPGGYSGGGSGNGSNTKPSNWKTRICNKWEMTGYCPFGN 240
           D CTFLHDEQSKNRESVAISLGPGGYSGGGSGNGSNTKPSNWKTRICNKWE+TGYCPFGN
Sbjct: 181 DGCTFLHDEQSKNRESVAISLGPGGYSGGGSGNGSNTKPSNWKTRICNKWELTGYCPFGN 240

Query: 241 KCHFAHGAAETRDSSSAPPDPKQGVLPKAPGDTVVAFAPSVPHADAYHVVVPSQRSTIVL 300
           KCHFAHGAAETRDSSSAPPD KQGVLPKAPGDTVVA  PSVPH+D YHVV+PSQRSTIV+
Sbjct: 241 KCHFAHGAAETRDSSSAPPDQKQGVLPKAPGDTVVASVPSVPHSDVYHVVIPSQRSTIVI 300

Query: 301 QRPGQRAHQKWKGPDKISRIYGDWIDDNE 326
           QR GQR HQKWKGPDKISRIYGDWIDDNE
Sbjct: 301 QRSGQRTHQKWKGPDKISRIYGDWIDDNE 329

[Close]

BLAST of Sed0021791 vs. ExPASy TrEMBL
Match: A0A6J1K7G5 (zinc finger CCCH domain-containing protein 12-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111491331 PE=4 SV=1)

HSP 1 Score: 634.8 bits (1636), Expect = 2.0e-178
Identity = 301/329 (91.49%), Postives = 311/329 (94.53%), Query Frame = 0


Query: 1   MDYSGGNVVHVIP----ENWPGEVWATEDEYRAWNNGGDGSGDTPSNSSFDQRQSQSRSG 60
           MDY+GGNVVHVIP    ENWPGEVWATEDEYRAWNNG DG  DTPSNSS+DQRQSQSRSG
Sbjct: 1   MDYNGGNVVHVIPGTSSENWPGEVWATEDEYRAWNNGVDGCVDTPSNSSYDQRQSQSRSG 60

Query: 61  SEPPNKKSRGSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPP 120
           SEPPNKKSR SQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPP
Sbjct: 61  SEPPNKKSRSSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPP 120

Query: 121 PNWQQEIVAAHEEDRGLFSEPREEFQIPSLGASNFGSESQRSYKGRHCKKFYTEEGCPYG 180
           PNWQQEIVAAHEE++ +F EPREEFQIPSLG SNFGSESQRSYKGRHCKKFYTEEGCPYG
Sbjct: 121 PNWQQEIVAAHEEEKAVFLEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYG 180

Query: 181 DSCTFLHDEQSKNRESVAISLGPGGYSGGGSGNGSNTKPSNWKTRICNKWEMTGYCPFGN 240
           D CTFLHDEQSKNRESVAISLGPGGYSGGGSGNGSNTKPSNWKTRICNKWE+TGYCPFGN
Sbjct: 181 DGCTFLHDEQSKNRESVAISLGPGGYSGGGSGNGSNTKPSNWKTRICNKWELTGYCPFGN 240

Query: 241 KCHFAHGAAETRDSSSAPPDPKQGVLPKAPGDTVVAFAPSVPHADAYHVVVPSQRSTIVL 300
           KCHFAHGAAETRDSSSAPPD KQGVLPKAPGDTVVA  PSVPH+D YHV++PSQRSTIV+
Sbjct: 241 KCHFAHGAAETRDSSSAPPDQKQGVLPKAPGDTVVASVPSVPHSDVYHVMIPSQRSTIVI 300

Query: 301 QRPGQRAHQKWKGPDKISRIYGDWIDDNE 326
           QR GQR HQKWKGPDKISRIYGDWIDDNE
Sbjct: 301 QRSGQRTHQKWKGPDKISRIYGDWIDDNE 329

[Close]

BLAST of Sed0021791 vs. ExPASy TrEMBL
Match: A0A1S3CRN1 (zinc finger CCCH domain-containing protein 12 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103503556 PE=4 SV=1)

HSP 1 Score: 629.4 bits (1622), Expect = 8.3e-177
Identity = 303/337 (89.91%), Postives = 312/337 (92.58%), Query Frame = 0


Query: 1   MDYSGGNVVHVI----PENWPGEVWATEDEYRAWNNGGDGSGDTPSNSSFDQRQSQSRSG 60
           MDYSGGNVVHVI     ENWPGEVWATEDEYRAWNNGGDGS DTPSNSS+DQRQSQSRSG
Sbjct: 1   MDYSGGNVVHVISGTSSENWPGEVWATEDEYRAWNNGGDGSVDTPSNSSYDQRQSQSRSG 60

Query: 61  SEPPNKKSRGSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPP 120
           SEPPNKKSR SQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNF HSIEELRRPP
Sbjct: 61  SEPPNKKSRSSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFGHSIEELRRPP 120

Query: 121 PNWQQEIVAAHEEDRGLFSEPREEFQIPSLGASNFGSESQRSYKGRHCKKFYTEEGCPYG 180
            NWQQEIVAAHEE++ + SEPREEFQIPSLG SNFGSESQRSYKGRHCKKFYTEEGCPYG
Sbjct: 121 HNWQQEIVAAHEEEKAVLSEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYG 180

Query: 181 DSCTFLHDEQSKNRESVAISLGPGGYS--------GGGSGNGSNTKPSNWKTRICNKWEM 240
           DSCTFLHDEQSKNRESVAISLGPGGYS        GGGSGNGSNTKPSNWKTRICNKWE+
Sbjct: 181 DSCTFLHDEQSKNRESVAISLGPGGYSGGGGGGGGGGGSGNGSNTKPSNWKTRICNKWEL 240

Query: 241 TGYCPFGNKCHFAHGAAETRDSSSAPPDPKQGVLPKAPGDTVVAFAPSVPHADAYHVVVP 300
           TGYCPFGNKCHFAHGAAETRDSS+APPDPKQGVLPKAPGDT+VA  PSVPH+D YHVVVP
Sbjct: 241 TGYCPFGNKCHFAHGAAETRDSSAAPPDPKQGVLPKAPGDTLVASVPSVPHSDVYHVVVP 300

Query: 301 SQRSTIVLQRPGQRAHQKWKGPDKISRIYGDWIDDNE 326
           SQRSTIV+QRPGQR HQKWKGPDKISRIYGDWIDD E
Sbjct: 301 SQRSTIVIQRPGQRTHQKWKGPDKISRIYGDWIDDIE 337

[Close]

BLAST of Sed0021791 vs. ExPASy TrEMBL
Match: A0A6J1EX21 (zinc finger CCCH domain-containing protein 12-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437313 PE=4 SV=1)

HSP 1 Score: 626.7 bits (1615), Expect = 5.4e-176
Identity = 302/341 (88.56%), Postives = 311/341 (91.20%), Query Frame = 0


Query: 1   MDYSGGNVVHVIP----ENWPGEVWATEDEYRAWNNGGDGSGDTPSNSSFDQRQSQSRSG 60
           MDY+GGNVVHVIP    ENWPGEVWATEDEYRAWNNG DG  DTPSNSS+DQRQSQSRSG
Sbjct: 1   MDYNGGNVVHVIPGTSSENWPGEVWATEDEYRAWNNGVDGFVDTPSNSSYDQRQSQSRSG 60

Query: 61  SEPPNKKSRGSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPP 120
           SEPPNKKSR SQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPP
Sbjct: 61  SEPPNKKSRSSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPP 120

Query: 121 PNWQQEIVAAHEEDRGLFSEPREEFQIPSLGASNFGSESQRSYKGRHCKKFYTEEGCPYG 180
           PNWQQEIVAAHEE++ +F EPREEFQIPSLG SNFGSESQRSYKGRHCKKFYTEEGCPYG
Sbjct: 121 PNWQQEIVAAHEEEKAVFLEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYG 180

Query: 181 DSCTFLHDEQSKNRESVAISLGPGGYSGGGSGNGSNTKPSNWKTRICNKWEMTGYCPFGN 240
           D CTFLHDEQSKNRESVAISLGPGGYSGGGSGNGSNTKPSNWKTRICNKWE+TGYCPFGN
Sbjct: 181 DGCTFLHDEQSKNRESVAISLGPGGYSGGGSGNGSNTKPSNWKTRICNKWELTGYCPFGN 240

Query: 241 KCHFAHGAA------------ETRDSSSAPPDPKQGVLPKAPGDTVVAFAPSVPHADAYH 300
           KCHFAHGAA            ETRDSSSAPPD KQGVLPKAPGDTVVA  PSVPH+D YH
Sbjct: 241 KCHFAHGAAELHRYGGGLMETETRDSSSAPPDQKQGVLPKAPGDTVVASVPSVPHSDVYH 300

Query: 301 VVVPSQRSTIVLQRPGQRAHQKWKGPDKISRIYGDWIDDNE 326
           VV+PSQRSTIV+QR GQR HQKWKGPDKISRIYGDWIDDNE
Sbjct: 301 VVIPSQRSTIVIQRSGQRTHQKWKGPDKISRIYGDWIDDNE 341

[Close]

BLAST of Sed0021791 vs. ExPASy TrEMBL
Match: A0A6J1K0H9 (zinc finger CCCH domain-containing protein 12-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111491331 PE=4 SV=1)

HSP 1 Score: 625.9 bits (1613), Expect = 9.2e-176
Identity = 301/341 (88.27%), Postives = 311/341 (91.20%), Query Frame = 0


Query: 1   MDYSGGNVVHVIP----ENWPGEVWATEDEYRAWNNGGDGSGDTPSNSSFDQRQSQSRSG 60
           MDY+GGNVVHVIP    ENWPGEVWATEDEYRAWNNG DG  DTPSNSS+DQRQSQSRSG
Sbjct: 1   MDYNGGNVVHVIPGTSSENWPGEVWATEDEYRAWNNGVDGCVDTPSNSSYDQRQSQSRSG 60

Query: 61  SEPPNKKSRGSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPP 120
           SEPPNKKSR SQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPP
Sbjct: 61  SEPPNKKSRSSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPP 120

Query: 121 PNWQQEIVAAHEEDRGLFSEPREEFQIPSLGASNFGSESQRSYKGRHCKKFYTEEGCPYG 180
           PNWQQEIVAAHEE++ +F EPREEFQIPSLG SNFGSESQRSYKGRHCKKFYTEEGCPYG
Sbjct: 121 PNWQQEIVAAHEEEKAVFLEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYG 180

Query: 181 DSCTFLHDEQSKNRESVAISLGPGGYSGGGSGNGSNTKPSNWKTRICNKWEMTGYCPFGN 240
           D CTFLHDEQSKNRESVAISLGPGGYSGGGSGNGSNTKPSNWKTRICNKWE+TGYCPFGN
Sbjct: 181 DGCTFLHDEQSKNRESVAISLGPGGYSGGGSGNGSNTKPSNWKTRICNKWELTGYCPFGN 240

Query: 241 KCHFAHGAA------------ETRDSSSAPPDPKQGVLPKAPGDTVVAFAPSVPHADAYH 300
           KCHFAHGAA            ETRDSSSAPPD KQGVLPKAPGDTVVA  PSVPH+D YH
Sbjct: 241 KCHFAHGAAELHRYGGGLMETETRDSSSAPPDQKQGVLPKAPGDTVVASVPSVPHSDVYH 300

Query: 301 VVVPSQRSTIVLQRPGQRAHQKWKGPDKISRIYGDWIDDNE 326
           V++PSQRSTIV+QR GQR HQKWKGPDKISRIYGDWIDDNE
Sbjct: 301 VMIPSQRSTIVIQRSGQRTHQKWKGPDKISRIYGDWIDDNE 341

[Close]

BLAST of Sed0021791 vs. TAIR 10
Match: AT1G32360.1 (Zinc finger (CCCH-type) family protein )

HSP 1 Score: 389.8 bits (1000), Expect = 2.1e-108
Identity = 230/395 (58.23%), Postives = 252/395 (63.80%), Query Frame = 0


Query: 4   SGGNVVHVIPENWP-----------GEVWATEDEY-RAWNNGGDGSGDTPSNSSFDQRQS 63
           SGG+VVHVIP N P             VWATED+Y RAW          P N+S D    
Sbjct: 8   SGGDVVHVIPTNNPPPDNWFPNLGDSAVWATEDDYNRAW-------AMNPDNTSGD---- 67

Query: 64  QSRSGSEPPNKKSRGSQDVTS-------SNRSKAIGKMFFKTKLCCKFRAGTCPYITNCN 123
                + PPNKK+RGS   +S       SNR+KAIGKMFFKTKLCCKFRAGTCPYITNCN
Sbjct: 68  ----NNGPPNKKTRGSPSSSSATTTSAASNRTKAIGKMFFKTKLCCKFRAGTCPYITNCN 127

Query: 124 FAHSIEELRRPPPNWQQEIVAAHEEDR---------GLFSEPREEFQIPSLGASNFGSES 183
           FAH++EELRRPPPNW QEIVAAHEE+R          +   PREEFQIPSL +S   +ES
Sbjct: 128 FAHTVEELRRPPPNW-QEIVAAHEEERSGGMGTPTVSVVEIPREEFQIPSLVSST--AES 187

Query: 184 QRSYKGRHCKKFYTEEGCPYGDSCTFLHDEQSKNRESVAISLGPGGY------------- 243
            RS+KGRHCKKFYTEEGCPYG+SCTFLHDE S+NRESVAISLGPGGY             
Sbjct: 188 GRSFKGRHCKKFYTEEGCPYGESCTFLHDEASRNRESVAISLGPGGYGSGGGGGSGGGSV 247

Query: 244 -------------SGGGSGNGSN---TKPSNWKTRICNKWEMTGYCPFGNKCHFAHGAAE 303
                         GGGSG+GS     KPSNWKTRICNKWE+TGYCPFG KCHFAHGAAE
Sbjct: 248 GGGGSSSNVVVLGGGGGSGSGSGIQILKPSNWKTRICNKWEITGYCPFGAKCHFAHGAAE 307

Query: 304 T------------RDSSSAPPDPKQGVL-PKAPGDTVVAFAPSVPH-ADA-YHVVVPSQR 326
                        +D  S  PD KQ V  PK   DT    +P VPH ADA YH  V  QR
Sbjct: 308 LHRFGGGLVEEEGKDGVSPNPDTKQTVQNPKGLSDTTTLLSPGVPHNADASYHTGVALQR 367

[Close]

BLAST of Sed0021791 vs. TAIR 10
Match: AT2G35430.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 176.0 bits (445), Expect = 4.8e-44
Identity = 134/355 (37.75%), Postives = 160/355 (45.07%), Query Frame = 0


Query: 2   DYSGGNVVHV-----------IPENWPGEVWATEDEY-RAWNNGGDGSGDTPSNSSFDQR 61
           DY G + VHV            P +    VWATED+Y R W    D              
Sbjct: 6   DY-GSDAVHVRITHDPPPENCFPNSGDSSVWATEDDYSRVWAINSD-------------- 65

Query: 62  QSQSRSGSEPPNKKSRGSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPY-ITNCNFAHS 121
                 G+E P+KK+R       S+ S  IGK FFKTKLC KFRAGTCPY  ++C+FAHS
Sbjct: 66  ------GAESPSKKTR-------SSSSSEIGKSFFKTKLCFKFRAGTCPYSASSCHFAHS 125

Query: 122 IEELR---RPPPNWQQEIVAAHEEDRGLFSEPREEFQIPSLGASNFGSESQRSYKGRHCK 181
            EELR    PPPNWQ+ +                                          
Sbjct: 126 AEELRLPPPPPPNWQETVT----------------------------------------- 185

Query: 182 KFYTEEGCPYGDSCTFLHDEQSKNRESVAISLGPGGYSGGGSGNGSNT-KPSNWKTRICN 241
                              E S+NRES A+SLGP        GN + T K  NWKTRICN
Sbjct: 186 -------------------EASRNRESFAVSLGP-------RGNVAQTLKSPNWKTRICN 245

Query: 242 KWEMTGYCPFGNKCHFAHGAA------------ETRDSSSAPPDPKQGVLPKAPGDTVVA 301
           KW+ TGYCPFG+ CHFAHG +            E +  +SA  D KQ    +   DTV +
Sbjct: 246 KWQTTGYCPFGSHCHFAHGPSELHTFGGGLVEGECKIGTSATLDTKQ----RGQVDTVTS 252

Query: 302 FAPSVPHADAYHVVVPSQR-STIVLQRP-GQRAHQKWKGPDKISRIYGDWIDDNE 326
                         V SQR S+ V Q+P G R  +KWKGPDKISR+YGDWIDD E
Sbjct: 306 LVSP---------GVSSQRTSSAVTQKPNGVRTQRKWKGPDKISRVYGDWIDDIE 252

[Close]

BLAST of Sed0021791 vs. TAIR 10
Match: AT3G19360.1 (Zinc finger (CCCH-type) family protein )

HSP 1 Score: 155.2 bits (391), Expect = 8.8e-38
Identity = 105/282 (37.23%), Postives = 137/282 (48.58%), Query Frame = 0


Query: 76  SKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPPPNWQQEIVAAHE--EDRGL 135
           +K    +F+KT++C KFRAGTC     CNFAH IE+LR+PP NW QEIV      +DR  
Sbjct: 97  NKGTANIFYKTRMCAKFRAGTCRNGELCNFAHGIEDLRQPPSNW-QEIVGPPPAGQDRER 156

Query: 136 FSEPREEFQIPSLGA---SNFGSESQRSYKGRHCKKFYTEEGCPYGDSCTFLHDEQS--- 195
             E   E + PSL     +N+  + +   + + C+KF   E CPYGD C F+H++ S   
Sbjct: 157 ERERERERERPSLAPVVNNNWEDDQKIILRMKLCRKFCFGEECPYGDRCNFIHEDLSKFR 216

Query: 196 ----KNRESVAISLG------PGGYSGG-------GS-------GNGSNTKPSNWKTRIC 255
               K RES  IS+G      P   +         GS        NG   K   WKTR+C
Sbjct: 217 EDSGKLRESSVISVGATAADQPSDTASNLIEVNRQGSIPVPAPMNNGGVVKTVYWKTRLC 276

Query: 256 NKWEMTGYCPFGNKCHFAHGAAETRDSSSAPPDPKQGVLPKAPGDTVVAFAPSVPHADAY 315
            K+++TG CPFG+KCHFAHG AE  +S           +       VV        A A 
Sbjct: 277 MKFDITGQCPFGDKCHFAHGQAELHNSVGRVEGEAMNAVASVNKQAVV----PANEAFAM 336

Query: 316 HVVVPSQRSTIVLQRPGQRAH--QKWKGPDKISRIYGDWIDD 324
             +      +  L   G+R     KW    KI+RIYGDWIDD
Sbjct: 337 KPITQVTADSSGLNEEGRRKKCLLKWSDSKKINRIYGDWIDD 373

[Close]

BLAST of Sed0021791 vs. TAIR 10
Match: AT3G12130.1 (KH domain-containing protein / zinc finger (CCCH type) family protein )

HSP 1 Score: 59.3 bits (142), Expect = 6.6e-09
Identity = 31/55 (56.36%), Postives = 37/55 (67.27%), Query Frame = 0


Query: 199 PGGYSGGGSGNGSNTKP---SNWKTRICNKWEMTGYCPFGNKCHFAHGAAETRDS 251
           PGG  GGG G GS  KP   SN+KT+IC ++   G C FG++CHFAHG AE R S
Sbjct: 192 PGGGLGGGGGMGSEGKPHPGSNFKTKICERFS-KGNCTFGDRCHFAHGEAELRKS 245

[Close]

BLAST of Sed0021791 vs. TAIR 10
Match: AT1G68200.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 50.4 bits (119), Expect = 3.1e-06
Identity = 18/30 (60.00%), Postives = 22/30 (73.33%), Query Frame = 0


Query: 219 KTRICNKWEMTGYCPFGNKCHFAHGAAETR 249
           KT +CNKW+ TG CP+G+ C FAHG  E R
Sbjct: 224 KTELCNKWQETGTCPYGDHCQFAHGIKELR 253

The following BLAST results are available for this feature:

BLAST of Sed0021791 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023533946.1	1.8e-178	91.79	zinc finger CCCH domain-containing protein 12-like isoform X3 [Cucurbita pepo su...	[more]
XP_022930985.1	2.4e-178	91.79	zinc finger CCCH domain-containing protein 12-like isoform X3 [Cucurbita moschat...	[more]
XP_022995984.1	4.1e-178	91.49	zinc finger CCCH domain-containing protein 12-like isoform X3 [Cucurbita maxima]	[more]
KAG6606260.1	1.7e-176	91.49	Zinc finger CCCH domain-containing protein 12, partial [Cucurbita argyrosperma s...	[more]
XP_008465990.1	1.7e-176	89.91	PREDICTED: zinc finger CCCH domain-containing protein 12 isoform X3 [Cucumis mel...	[more]

BLAST of Sed0021791 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LQM3	3.0e-107	58.23	Zinc finger CCCH domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q84UQ3	6.5e-102	55.93	Zinc finger CCCH domain-containing protein 56 OS=Oryza sativa subsp. japonica OX...	[more]
Q5PP65	6.8e-43	37.75	Zinc finger CCCH domain-containing protein 28 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9LT81	1.2e-36	37.23	Zinc finger CCCH domain-containing protein 39 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q69XQ3	2.6e-10	36.84	Zinc finger CCCH domain-containing protein 44 OS=Oryza sativa subsp. japonica OX...	[more]

BLAST of Sed0021791 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EYA4	1.2e-178	91.79	zinc finger CCCH domain-containing protein 12-like isoform X3 OS=Cucurbita mosch...	[more]
A0A6J1K7G5	2.0e-178	91.49	zinc finger CCCH domain-containing protein 12-like isoform X3 OS=Cucurbita maxim...	[more]
A0A1S3CRN1	8.3e-177	89.91	zinc finger CCCH domain-containing protein 12 isoform X3 OS=Cucumis melo OX=3656...	[more]
A0A6J1EX21	5.4e-176	88.56	zinc finger CCCH domain-containing protein 12-like isoform X1 OS=Cucurbita mosch...	[more]
A0A6J1K0H9	9.2e-176	88.27	zinc finger CCCH domain-containing protein 12-like isoform X1 OS=Cucurbita maxim...	[more]

BLAST of Sed0021791 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G32360.1	2.1e-108	58.23	Zinc finger (CCCH-type) family protein	[more]
AT2G35430.1	4.8e-44	37.75	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT3G19360.1	8.8e-38	37.23	Zinc finger (CCCH-type) family protein	[more]
AT3G12130.1	6.6e-09	56.36	KH domain-containing protein / zinc finger (CCCH type) family protein	[more]
AT1G68200.1	3.1e-06	60.00	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 217..244 e-value: 8.8E-9 score: 45.2 coord: 83..109 e-value: 0.0035 score: 26.6 coord: 158..185 e-value: 0.086 score: 22.0
IPR000571	Zinc finger, CCCH-type	PFAM	PF00642	zf-CCCH	coord: 84..108 e-value: 1.8E-5 score: 24.5 coord: 218..243 e-value: 1.0E-10 score: 41.2
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 217..245 score: 15.22499
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 158..186 score: 14.098298
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 83..110 score: 12.840159
IPR041367	E3 ligase, CCCH-type zinc finger	PFAM	PF18044	zf-CCCH_4	coord: 162..184 e-value: 2.3E-7 score: 30.4
None	No IPR available	GENE3D	4.10.1000.10		coord: 149..200 e-value: 3.5E-6 score: 28.9
None	No IPR available	GENE3D	4.10.1000.10		coord: 78..114 e-value: 4.7E-11 score: 43.9 coord: 210..249 e-value: 1.6E-15 score: 58.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 194..217
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..75
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..75
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 256..278
None	No IPR available	PANTHER	PTHR12547:SF136	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 12-LIKE	coord: 19..334
None	No IPR available	PANTHER	PTHR12547	CCCH ZINC FINGER/TIS11-RELATED	coord: 19..334
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 157..186
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 81..114
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 214..248

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0021791.1	Sed0021791.1	mRNA
Sed0021791.2	Sed0021791.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0000976	transcription cis-regulatory region binding