
Sed0021748 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGTACCTTATATTGAATAATTTGTTTCCGTGGATATTCAATGGTTTTTCAGGGTGCCTTTTGTTTTTTGTGATTAAGTTGGAACTCTCTCATTTGCTTTTTATATATAGACGAAGTAGTCGTCTAGACTATCACCAAAGACATGGCATTCTGGTCTTCCCTCTATGGTTTTGATAACCTGAATTTTCTGTAATATGTACAGGCTCGGATTAAGAAGATTATGCAGGCCGATGAAGATGTAGGGAAGATTGCTATGGCAGTCCCTCTTTTAGTCTGTAAGTACTAACTACCAGATAATGTGATGATTTCACAGTTGGAGCTTATTTCTTGTTTAGTATTATGTTTGGTACCAAAAAATATATTCAACTACGAAAAAACAAAATTGACAAAGATCACCATACAGGATACCCAGCCGTTGAGAAGGCTGAAACTCTTTGCATCACTTTTGGTTCTTACCCGAAATGATAACTATTTATGCACTGTCACCTCCCTTATAATTTCTGTGCCAAGCTACTAACTGACAGCATTTCAATTTCACTAATTGCCCCTTTTAGCAAAATGTTGTTTCTATTTTTATTTCAAATTCACGATTGGGGGCTGGATTGTTTCTAATTCTTCTCCAAAATGTTGTTTCTAGAATGTGTTCTAGTATGTTGATTATTCCCTTGTTTACTCGCTGACTAGTGTGTCTTAACTTGCAGCAAAGGCTCTGGAACTATTTTTACAAGATTTATGTGACAGGACGTATGAGATTACTCTGAAGAGGGGGGCTAAGAGAATGAACACTTTACACTTGTAAGTAAACTCTTAATTATTGAATTTTGCACATTCCGAGATTTTGGAACCAGGATGTACTTAATTAAGACTATCAACCTATCATTTCAATTCTTGATTAGTTGTCATCTGTTGGTTTATACTATGTGATGTTTAAAGCATTTATGGTTCTTTGGGCTTCTAGGCTCTAACTATAAATCAAATCTTATTGTTGCAATAAATTAAATGCGTTTCTTTCCTAATGCTCCAATTATAGATAAAATCTTATTGTTGCAATAAATTAAATACATTCTTTTTCCTAATATTTCATCTCACACTAAGTGCTATGAACGAGAAAACAGTTGAATTATAGTCTGCCTCCGCAGTTGTCTACCATACATTAACTTCTTACGCTTGTTTTGAATTGGCAGAAAACAATGCATACAGACGTTCAATGTTTTTGATTTCTTGAGGGATGTTGTGGGCAAGGTACCCGATTTAGGTGGCTCTGACGCTGCTGGGGAGGAATGTTGTGTTTCCAAAAGAAGGTTCTGAAAATACATGTTAGTCTTTCCGAGTGATGTGATATGAGGTATACATGTTTGATAGTGTTTTTTTTTTGTTTTGTTTCAGGAAAGTTGTAGATGAAGATGATGGTAGTGATAGTGAAGAAGAGTCCAAAAGGAGTAAGATGGTAAGAATTGTCTTCAAACATTTAATCCGGTTTATTCTTCATCAATGTGGTCCAAAAAAATGAAACTTTTTTAATAAAGAAAATGTCGTAACGATTGATGGACATGAATTATAAAAAATATACAGAGAGTAAGTGTTGATTATCGTAAGGCTGAACTAATATACGTAAATCTTAAATCCTAGAGATTATTTGAAATGAAACCATACGTTCTTCCTTTGCTATTCTATTTATTCTGGTTGTGATTGGTTCTGTTAAATTGTTGTCGGCAATCATATTTTGTTCAATTCTCTAATTTCTTTTTTTTTTTTAATTATAAAAATTGGGGGTGGGGGGATTCGAACCCATGACCTCTAGGTCATTGAGTATACAATGATGTCGCTGTGCTACTGCTCTTGTTGACATTTCTTTAATTCCTTTTTTGACTAAAAACATTGAAAACATAGCCCTTAGTCGCTTCGTACTGATAAATTGCTGCTTCAATTTAACTTTTTGTAGTGATATGATATTCAACTTCTATAATTTTTTTATTACTATGAGGAAGTTGTTTTATTCTTCTAGGCCATAAACTCCTTCGGTTTCTCTCCATTTGACAAGACTTTTCTGTACTGTTTGCAGCACAAATTCATAAGGATGCCATTGAATTGAACTATTGTTATTCGTTACTTTTGCTTGATCTAACAAAAACCATATATAAATTATGTGATACTTGTTTCATTACTATTCACTTCTGTTGTAGACAGAGGCTGGTCATCATATAAGTGGCAGAGGAAGGGGTAGGGGCAGAGGTAGAGGACGTGTGCGTAGTAGTAAACATGTGGAGAAAGATATAGCCACACATCATGATAACTTCGAAGACGATTTGAAAATTCCTAATCTTTCCAGTGAGGTCACCAAAGCTCTGCCAGATAACAGTGTAGCCGAAATTCGAATAGGGAATAATAACATTGCTGGCGAAAAAGCTGGAGAACCATCAGTTCGGAACTTTGACTTGAATGTAAACTTGGAAGAAGACGGGGACTGGAGTATAATGCAGGTGGCTGCTCCTACAAGTTCACCAATTAAGGCCCCAACACCAACAGGCTGTAAACATGAATACCGTGGATGGTCAGTGACTGAAATGAAAAAGATGGCTATGGATCCAATTCAACTAGCCAATTTGAATAAAACAATAGATGATGAGGAAGATTATGATGAAGAAGGTTAGTTATGGAACCTCTTTTCTGCCATCTAGCTGCTAATTAGCAATTTGATTTACCCTCTAGTGAAATAGATGAAGTAGCAGTAGGTGCAGGAGGATAGTGTTGTGATAGAT TGTACCTTATATTGAATAATTTGTTTCCGTGGATATTCAATGGTTTTTCAGGGTGCCTTTTGTTTTTTGTGATTAAGTTGGAACTCTCTCATTTGCTTTTTATATATAGACGAAGTAGTCGTCTAGACTATCACCAAAGACATGGCATTCTGGTCTTCCCTCTATGGTTTTGATAACCTGAATTTTCTGTAATATGTACAGGCTCGGATTAAGAAGATTATGCAGGCCGATGAAGATGTAGGGAAGATTGCTATGGCAGTCCCTCTTTTAGTCTCAAAGGCTCTGGAACTATTTTTACAAGATTTATGTGACAGGACGTATGAGATTACTCTGAAGAGGGGGGCTAAGAGAATGAACACTTTACACTTAAAACAATGCATACAGACGTTCAATGTTTTTGATTTCTTGAGGGATGTTGTGGGCAAGGTACCCGATTTAGGTGGCTCTGACGCTGCTGGGGAGGAATGTTGTGTTTCCAAAAGAAGGAAAGTTGTAGATGAAGATGATGGTAGTGATAGTGAAGAAGAGTCCAAAAGGAGTAAGATGACAGAGGCTGGTCATCATATAAGTGGCAGAGGAAGGGGTAGGGGCAGAGGTAGAGGACGTGTGCGTAGTAGTAAACATGTGGAGAAAGATATAGCCACACATCATGATAACTTCGAAGACGATTTGAAAATTCCTAATCTTTCCAGTGAGGTCACCAAAGCTCTGCCAGATAACAGTGTAGCCGAAATTCGAATAGGGAATAATAACATTGCTGGCGAAAAAGCTGGAGAACCATCAGTTCGGAACTTTGACTTGAATGTAAACTTGGAAGAAGACGGGGACTGGAGTATAATGCAGGTGGCTGCTCCTACAAGTTCACCAATTAAGGCCCCAACACCAACAGGCTGTAAACATGAATACCGTGGATGGTCAGTGACTGAAATGAAAAAGATGGCTATGGATCCAATTCAACTAGCCAATTTGAATAAAACAATAGATGATGAGGAAGATTATGATGAAGAAGGTTAGTTATGGAACCTCTTTTCTGCCATCTAGCTGCTAATTAGCAATTTGATTTACCCTCTAGTGAAATAGATGAAGTAGCAGTAGGTGCAGGAGGATAGTGTTGTGATAGAT ATGCAGGCCGATGAAGATGTAGGGAAGATTGCTATGGCAGTCCCTCTTTTAGTCTCAAAGGCTCTGGAACTATTTTTACAAGATTTATGTGACAGGACGTATGAGATTACTCTGAAGAGGGGGGCTAAGAGAATGAACACTTTACACTTAAAACAATGCATACAGACGTTCAATGTTTTTGATTTCTTGAGGGATGTTGTGGGCAAGGTACCCGATTTAGGTGGCTCTGACGCTGCTGGGGAGGAATGTTGTGTTTCCAAAAGAAGGAAAGTTGTAGATGAAGATGATGGTAGTGATAGTGAAGAAGAGTCCAAAAGGAGTAAGATGACAGAGGCTGGTCATCATATAAGTGGCAGAGGAAGGGGTAGGGGCAGAGGTAGAGGACGTGTGCGTAGTAGTAAACATGTGGAGAAAGATATAGCCACACATCATGATAACTTCGAAGACGATTTGAAAATTCCTAATCTTTCCAGTGAGGTCACCAAAGCTCTGCCAGATAACAGTGTAGCCGAAATTCGAATAGGGAATAATAACATTGCTGGCGAAAAAGCTGGAGAACCATCAGTTCGGAACTTTGACTTGAATGTAAACTTGGAAGAAGACGGGGACTGGAGTATAATGCAGGTGGCTGCTCCTACAAGTTCACCAATTAAGGCCCCAACACCAACAGGCTGTAAACATGAATACCGTGGATGGTCAGTGACTGAAATGAAAAAGATGGCTATGGATCCAATTCAACTAGCCAATTTGAATAAAACAATAGATGATGAGGAAGATTATGATGAAGAAGGTTAG MQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLKRGAKRMNTLHLKQCIQTFNVFDFLRDVVGKVPDLGGSDAAGEECCVSKRRKVVDEDDGSDSEEESKRSKMTEAGHHISGRGRGRGRGRGRVRSSKHVEKDIATHHDNFEDDLKIPNLSSEVTKALPDNSVAEIRIGNNNIAGEKAGEPSVRNFDLNVNLEEDGDWSIMQVAAPTSSPIKAPTPTGCKHEYRGWSVTEMKKMAMDPIQLANLNKTIDDEEDYDEEG Homology
BLAST of Sed0021748 vs. NCBI nr
Match: XP_022153057.1 (dr1-associated corepressor-like [Momordica charantia]) HSP 1 Score: 404.4 bits (1038), Expect = 7.3e-109 Identity = 213/266 (80.08%), Postives = 234/266 (87.97%), Query Frame = 0
BLAST of Sed0021748 vs. NCBI nr
Match: XP_023512169.1 (dr1-associated corepressor-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 382.5 bits (981), Expect = 3.0e-102 Identity = 205/266 (77.07%), Postives = 227/266 (85.34%), Query Frame = 0
BLAST of Sed0021748 vs. NCBI nr
Match: XP_023512170.1 (dr1-associated corepressor-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 382.5 bits (981), Expect = 3.0e-102 Identity = 205/266 (77.07%), Postives = 227/266 (85.34%), Query Frame = 0
BLAST of Sed0021748 vs. NCBI nr
Match: XP_004140269.1 (dr1-associated corepressor [Cucumis sativus] >KGN48062.1 hypothetical protein Csa_004338 [Cucumis sativus]) HSP 1 Score: 381.7 bits (979), Expect = 5.1e-102 Identity = 202/266 (75.94%), Postives = 230/266 (86.47%), Query Frame = 0
BLAST of Sed0021748 vs. NCBI nr
Match: XP_022986743.1 (dr1-associated corepressor-like [Cucurbita maxima] >XP_022986744.1 dr1-associated corepressor-like [Cucurbita maxima]) HSP 1 Score: 381.7 bits (979), Expect = 5.1e-102 Identity = 204/266 (76.69%), Postives = 227/266 (85.34%), Query Frame = 0
BLAST of Sed0021748 vs. ExPASy Swiss-Prot
Match: Q14919 (Dr1-associated corepressor OS=Homo sapiens OX=9606 GN=DRAP1 PE=1 SV=3) HSP 1 Score: 85.5 bits (210), Expect = 9.8e-16 Identity = 54/149 (36.24%), Postives = 78/149 (52.35%), Query Frame = 0
BLAST of Sed0021748 vs. ExPASy Swiss-Prot
Match: A0JPP1 (Dr1-associated corepressor OS=Rattus norvegicus OX=10116 GN=Drap1 PE=2 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 1.3e-15 Identity = 54/149 (36.24%), Postives = 78/149 (52.35%), Query Frame = 0
BLAST of Sed0021748 vs. ExPASy Swiss-Prot
Match: Q2YDP3 (Dr1-associated corepressor OS=Bos taurus OX=9913 GN=DRAP1 PE=2 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 2.2e-15 Identity = 55/163 (33.74%), Postives = 87/163 (53.37%), Query Frame = 0
BLAST of Sed0021748 vs. ExPASy Swiss-Prot
Match: Q9D6N5 (Dr1-associated corepressor OS=Mus musculus OX=10090 GN=Drap1 PE=1 SV=3) HSP 1 Score: 82.8 bits (203), Expect = 6.4e-15 Identity = 55/163 (33.74%), Postives = 86/163 (52.76%), Query Frame = 0
BLAST of Sed0021748 vs. ExPASy Swiss-Prot
Match: Q54DA1 (Dr1-associated corepressor homolog OS=Dictyostelium discoideum OX=44689 GN=drap1 PE=3 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 4.1e-14 Identity = 51/153 (33.33%), Postives = 79/153 (51.63%), Query Frame = 0
BLAST of Sed0021748 vs. ExPASy TrEMBL
Match: A0A6J1DHX3 (dr1-associated corepressor-like OS=Momordica charantia OX=3673 GN=LOC111020653 PE=4 SV=1) HSP 1 Score: 404.4 bits (1038), Expect = 3.5e-109 Identity = 213/266 (80.08%), Postives = 234/266 (87.97%), Query Frame = 0
BLAST of Sed0021748 vs. ExPASy TrEMBL
Match: A0A6J1JHF3 (dr1-associated corepressor-like OS=Cucurbita maxima OX=3661 GN=LOC111484411 PE=4 SV=1) HSP 1 Score: 381.7 bits (979), Expect = 2.5e-102 Identity = 204/266 (76.69%), Postives = 227/266 (85.34%), Query Frame = 0
BLAST of Sed0021748 vs. ExPASy TrEMBL
Match: A0A0A0KI73 (CBFD_NFYB_HMF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G426970 PE=4 SV=1) HSP 1 Score: 381.7 bits (979), Expect = 2.5e-102 Identity = 202/266 (75.94%), Postives = 230/266 (86.47%), Query Frame = 0
BLAST of Sed0021748 vs. ExPASy TrEMBL
Match: A0A5D3BAU9 (Dr1-associated corepressor-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G00430 PE=4 SV=1) HSP 1 Score: 378.6 bits (971), Expect = 2.1e-101 Identity = 201/266 (75.56%), Postives = 229/266 (86.09%), Query Frame = 0
BLAST of Sed0021748 vs. ExPASy TrEMBL
Match: A0A1S3BMF4 (dr1-associated corepressor-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491444 PE=4 SV=1) HSP 1 Score: 378.6 bits (971), Expect = 2.1e-101 Identity = 201/266 (75.56%), Postives = 229/266 (86.09%), Query Frame = 0
BLAST of Sed0021748 vs. TAIR 10
Match: AT3G12480.1 (nuclear factor Y, subunit C11 ) HSP 1 Score: 187.6 bits (475), Expect = 1.3e-47 Identity = 132/287 (45.99%), Postives = 170/287 (59.23%), Query Frame = 0
BLAST of Sed0021748 vs. TAIR 10
Match: AT5G19490.1 (Histone superfamily protein ) HSP 1 Score: 182.2 bits (461), Expect = 5.5e-46 Identity = 123/271 (45.39%), Postives = 156/271 (57.56%), Query Frame = 0
BLAST of Sed0021748 vs. TAIR 10
Match: AT5G63470.1 (nuclear factor Y, subunit C4 ) HSP 1 Score: 45.1 bits (105), Expect = 1.0e-04 Identity = 26/79 (32.91%), Postives = 42/79 (53.16%), Query Frame = 0
BLAST of Sed0021748 vs. TAIR 10
Match: AT5G63470.2 (nuclear factor Y, subunit C4 ) HSP 1 Score: 45.1 bits (105), Expect = 1.0e-04 Identity = 26/79 (32.91%), Postives = 42/79 (53.16%), Query Frame = 0
BLAST of Sed0021748 vs. TAIR 10
Match: AT3G48590.1 (nuclear factor Y, subunit C1 ) HSP 1 Score: 43.9 bits (102), Expect = 2.3e-04 Identity = 23/67 (34.33%), Postives = 38/67 (56.72%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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