Homology
BLAST of Sed0021713 vs. NCBI nr
Match:
XP_022150421.1 (pentatricopeptide repeat-containing protein At1g06710, mitochondrial [Momordica charantia] >XP_022150422.1 pentatricopeptide repeat-containing protein At1g06710, mitochondrial [Momordica charantia] >XP_022150423.1 pentatricopeptide repeat-containing protein At1g06710, mitochondrial [Momordica charantia])
HSP 1 Score: 1778.5 bits (4605), Expect = 0.0e+00
Identity = 879/1017 (86.43%), Postives = 943/1017 (92.72%), Query Frame = 0
Query: 1 MSRRGLKSLKSLSISFLSSPIRSNNEVFSTNPFHICFDSSRAA----NLHRQTLSSAIAK 60
MSRRGLKSL+ LS SF SSP R N VFSTNP I DSSR + +++R +LSSAIAK
Sbjct: 1 MSRRGLKSLRLLSTSFNSSPFRL-NAVFSTNPSLIFSDSSRFSFGNISVYRLSLSSAIAK 60
Query: 61 YSTSSPDDLEGLVDPDGSIPSEVSRVE----SEIALLRDSLLDSHAESCSSERTLEIGKV 120
Y+TS PD+LEGLVD D S PSE SRVE E+ LRDSLLDS A+S SSE+TLEIGK+
Sbjct: 61 YTTSPPDNLEGLVDLDDSNPSESSRVECFSAQEVGFLRDSLLDSPADSGSSEKTLEIGKI 120
Query: 121 SIEAVSILDAIRNSDDGFGEKTQKLLRQFRQKLNPDLVVEILSLLKSPELCVKLFLWVGR 180
S EA+SILDAIRN DDGFG+KTQKLLRQFRQ LNPDLVVE+L+LL+SPELCV+ FLW GR
Sbjct: 121 SNEAISILDAIRNGDDGFGDKTQKLLRQFRQSLNPDLVVEVLNLLRSPELCVRFFLWAGR 180
Query: 181 QIGYNHTASVYKALLDVFEFGSYDRVPDQFLREIKGDDREVLEKLLNVLIRKCCRNGLWN 240
QIGYNHTASVY ALLDVFE +YDRVP+++LREI GDD+ VL KLLNVLIRKCCRNGLWN
Sbjct: 181 QIGYNHTASVYCALLDVFECDNYDRVPEEYLREIWGDDKVVLGKLLNVLIRKCCRNGLWN 240
Query: 241 LALEELGRLKDFGYKPTRVTYNALIQVFLRADKLDTAHLVHREMSELGFSMDEFTLGFFA 300
+ALEELGRLKDFGYKPTR+TYNALIQVFLRADKLDTAHLVHREMS+ GFSMDEFTLGFFA
Sbjct: 241 VALEELGRLKDFGYKPTRLTYNALIQVFLRADKLDTAHLVHREMSQSGFSMDEFTLGFFA 300
Query: 301 QALCKVGRWRDALLLVEKEDIVPNTILYTKMISGLCEASNFEEAMDFLNRMRSSSCIPNV 360
QALC+VG+WRDAL L+EKED VPNT+LYTKMISGLCEAS FEEAMDFLNRMRS+SCIPN
Sbjct: 301 QALCRVGKWRDALSLIEKEDFVPNTVLYTKMISGLCEASLFEEAMDFLNRMRSTSCIPNA 360
Query: 361 QTYKILLCGCLNKNQLGRCKRILSMMIAEGCFPTYRIFSSLVHAYCKTGDFSYAYKLLKK 420
QTYKILLCGCLNK QLGRCKRILSMMIAEGCFP+YRIF+SLVHAYC++GDFSYAYKLLKK
Sbjct: 361 QTYKILLCGCLNKKQLGRCKRILSMMIAEGCFPSYRIFNSLVHAYCRSGDFSYAYKLLKK 420
Query: 421 MEKCECKPGYVIYNILIGGICSGQELPGPRSFELAEKAYDEMLSAGTVLNKVNVVSFARC 480
ME C CKPGYV+YNILIGGIC +ELPGP +FELAEKAY+EMLSAGTVLNKVNVV+FARC
Sbjct: 421 MENCGCKPGYVVYNILIGGICGSEELPGPVTFELAEKAYNEMLSAGTVLNKVNVVNFARC 480
Query: 481 LCGFGKFEKAYKVIHEMMGNGFIPDTSTYSEVIGFLCNHSRVEKAFLLFKEMKGTGVVPD 540
LCGFGKFEKAYKVIHEMM NGFIPDTSTYSEVIGFLCN SRVE AFLLFKEMKGTGVVPD
Sbjct: 481 LCGFGKFEKAYKVIHEMMDNGFIPDTSTYSEVIGFLCNASRVENAFLLFKEMKGTGVVPD 540
Query: 541 VYTYTILIDCFSKAGFIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFE 600
VYTYTILIDCFSKAG IKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVS+ANELFE
Sbjct: 541 VYTYTILIDCFSKAGLIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSIANELFE 600
Query: 601 LMIAKGCVPNVITYTALIDGYCKSGNIEKACQIYARMRGEADIPDVDMYFKTENNLSEKP 660
LM+AKGC+PNVITYTALIDGYCKSGNIEKACQIY+RMRG+ DIPDVDMYFKTENN+SEKP
Sbjct: 601 LMLAKGCIPNVITYTALIDGYCKSGNIEKACQIYSRMRGDEDIPDVDMYFKTENNVSEKP 660
Query: 661 NVVTYGALVDGLCKAHKVKDARDLLETMFVEGCEPNDIVYDALIDGFCKAANLDKAQEVF 720
NVVT+GALVDGLCKAHKVKDAR+LLETMF+EGCEPN+IVYDALIDGFCKAA LD+AQEVF
Sbjct: 661 NVVTFGALVDGLCKAHKVKDARNLLETMFLEGCEPNNIVYDALIDGFCKAAKLDEAQEVF 720
Query: 721 SKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLSKA 780
+KMVERGYNPNVYTYSSLIDRLFKDKRLD VLKVLSKMLENSCAPNVVIYTEMIDGLSK
Sbjct: 721 AKMVERGYNPNVYTYSSLIDRLFKDKRLDFVLKVLSKMLENSCAPNVVIYTEMIDGLSKV 780
Query: 781 AKTEEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTY 840
AKT+EAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTY
Sbjct: 781 AKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTY 840
Query: 841 AVMINHCCSTGCLDEAYALLVEMKQTYWPKHISSYCKVIEGYKREFVLSLGLLEEVEKND 900
V+INHCC+TG LDEAYALL EMKQTYWPKHISSYCKVIEGY REF+LSLGLLEE EKND
Sbjct: 841 TVLINHCCATGFLDEAYALLDEMKQTYWPKHISSYCKVIEGYNREFILSLGLLEEAEKND 900
Query: 901 SAPVILLYRVLIDDFIKAGRLEVALELHKEVISASMPMAAKKNMYTTLIYSFSTATKTGQ 960
SAP+ILLYRVLID+FIKAGRLEVAL+LHKEVISASM MAAKKNMYT+LI+SFS ATK G
Sbjct: 901 SAPIILLYRVLIDNFIKAGRLEVALKLHKEVISASMSMAAKKNMYTSLIHSFSNATKIGH 960
Query: 961 AFELYSDMIRQGAIPDLGTFVHLIMGLIKVSRWDEALQLLDSICQMDINWLQQEDRP 1010
AFEL++DMIRQGAIPDLGTFVHLI GLIKVSRW+EALQL D ICQMDINWLQQED P
Sbjct: 961 AFELFNDMIRQGAIPDLGTFVHLITGLIKVSRWEEALQLADIICQMDINWLQQEDTP 1016
BLAST of Sed0021713 vs. NCBI nr
Match:
XP_022992076.1 (pentatricopeptide repeat-containing protein At1g06710, mitochondrial [Cucurbita maxima])
HSP 1 Score: 1773.8 bits (4593), Expect = 0.0e+00
Identity = 875/1017 (86.04%), Postives = 940/1017 (92.43%), Query Frame = 0
Query: 1 MSRRGLKSLKSLSISFLSSPIRSNNEVFSTNPFHICFDSSRAA----NLHRQTLSSAIAK 60
MSRRG KSL LS+S +SSP RS N +FS +PF + DS RAA L+R TLSS+IA
Sbjct: 1 MSRRGFKSLHFLSLSLISSPSRS-NPIFSFHPFPVYSDSFRAALANITLYRPTLSSSIAH 60
Query: 61 YSTSSPDDLEGLVDPDGSIPSEVSRVE----SEIALLRDSLLDSHAESCSSERTLEIGKV 120
+ST SPDDL+GLVDPD S PSE SRVE E++LLRDSLLDSHA+S SSE TL+ GK+
Sbjct: 61 FST-SPDDLQGLVDPDESFPSESSRVECFSAPEVSLLRDSLLDSHADSPSSEPTLKSGKI 120
Query: 121 SIEAVSILDAIRNSDDGFGEKTQKLLRQFRQKLNPDLVVEILSLLKSPELCVKLFLWVGR 180
S +A+SILD I NSDDGFG+KTQKLLRQFRQ LNPDLVVEIL LL++PELCVK FLW GR
Sbjct: 121 SNDAISILDTICNSDDGFGDKTQKLLRQFRQNLNPDLVVEILGLLRNPELCVKFFLWAGR 180
Query: 181 QIGYNHTASVYKALLDVFEFGSYDRVPDQFLREIKGDDREVLEKLLNVLIRKCCRNGLWN 240
QIGYNHTASVY ALLDV E GSYDRVP++FLREIK DD+EVL KLLNVLIRKCCRNG WN
Sbjct: 181 QIGYNHTASVYNALLDVCECGSYDRVPEKFLREIKDDDKEVLGKLLNVLIRKCCRNGFWN 240
Query: 241 LALEELGRLKDFGYKPTRVTYNALIQVFLRADKLDTAHLVHREMSELGFSMDEFTLGFFA 300
+ALEELGRLKDFGYKPTR+TYNALIQVFLRADKLDTA+LVHREMSELGF+MDEFTLG FA
Sbjct: 241 VALEELGRLKDFGYKPTRLTYNALIQVFLRADKLDTAYLVHREMSELGFNMDEFTLGLFA 300
Query: 301 QALCKVGRWRDALLLVEKEDIVPNTILYTKMISGLCEASNFEEAMDFLNRMRSSSCIPNV 360
QALCKVG+WR+AL L+EKED VPNTILYTKMISGLC+AS FEEAMDFLNRMRSSSCIPN
Sbjct: 301 QALCKVGKWREALSLIEKEDFVPNTILYTKMISGLCDASFFEEAMDFLNRMRSSSCIPNA 360
Query: 361 QTYKILLCGCLNKNQLGRCKRILSMMIAEGCFPTYRIFSSLVHAYCKTGDFSYAYKLLKK 420
+TYKILLCGCLNK QLGRCKRILSMMIAEGCFP+Y IF+SLVHAYCKTGDFSYAYKLLKK
Sbjct: 361 RTYKILLCGCLNKKQLGRCKRILSMMIAEGCFPSYTIFNSLVHAYCKTGDFSYAYKLLKK 420
Query: 421 MEKCECKPGYVIYNILIGGICSGQELPGPRSFELAEKAYDEMLSAGTVLNKVNVVSFARC 480
MEKCECKPGYV+YNILIGGIC+G+ELPGP +FELAEKAY+EM S+GTVLNKVNVVSFARC
Sbjct: 421 MEKCECKPGYVVYNILIGGICNGKELPGPITFELAEKAYNEMCSSGTVLNKVNVVSFARC 480
Query: 481 LCGFGKFEKAYKVIHEMMGNGFIPDTSTYSEVIGFLCNHSRVEKAFLLFKEMKGTGVVPD 540
LCGFGKFEKAYKVIHEMMGNGFIPDTSTYSEVIGF+CN SRVE AFLLFKEMKG G+VPD
Sbjct: 481 LCGFGKFEKAYKVIHEMMGNGFIPDTSTYSEVIGFMCNASRVENAFLLFKEMKGAGMVPD 540
Query: 541 VYTYTILIDCFSKAGFIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFE 600
VYTYTILIDCFSKAG I+QAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFE
Sbjct: 541 VYTYTILIDCFSKAGLIQQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFE 600
Query: 601 LMIAKGCVPNVITYTALIDGYCKSGNIEKACQIYARMRGEADIPDVDMYFKTENNLSEKP 660
+MIAKGC+PNVITYTALIDGY KSGNIE ACQIYARMRG+ADIPDVDMYFKTENN+SEKP
Sbjct: 601 VMIAKGCIPNVITYTALIDGYSKSGNIENACQIYARMRGDADIPDVDMYFKTENNVSEKP 660
Query: 661 NVVTYGALVDGLCKAHKVKDARDLLETMFVEGCEPNDIVYDALIDGFCKAANLDKAQEVF 720
NVVTYGALVDGLCKAHKVKDA DLLETMF EGCEPN+IVYDALIDGFCKAA LD+AQEVF
Sbjct: 661 NVVTYGALVDGLCKAHKVKDACDLLETMFSEGCEPNNIVYDALIDGFCKAAKLDEAQEVF 720
Query: 721 SKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLSKA 780
KMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNVVIYTEMIDGL K
Sbjct: 721 VKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLCKV 780
Query: 781 AKTEEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTY 840
AKT+EAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGC+PNFVTY
Sbjct: 781 AKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCSPNFVTY 840
Query: 841 AVMINHCCSTGCLDEAYALLVEMKQTYWPKHISSYCKVIEGYKREFVLSLGLLEEVEKND 900
V+INHCC++GCLDEAYALL EMKQTYWPKH+SSYCKV+EGY REF+LSLG+LEEVEKND
Sbjct: 841 TVLINHCCASGCLDEAYALLDEMKQTYWPKHVSSYCKVVEGYNREFILSLGILEEVEKND 900
Query: 901 SAPVILLYRVLIDDFIKAGRLEVALELHKEVISASMPMAAKKNMYTTLIYSFSTATKTGQ 960
+ P+ILLYRVLID+F+KAGRLEVALELHKEVISASM MAAKKNMYTTLIYSFS A K Q
Sbjct: 901 ATPIILLYRVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNMYTTLIYSFSKAMKIDQ 960
Query: 961 AFELYSDMIRQGAIPDLGTFVHLIMGLIKVSRWDEALQLLDSICQMDINWLQQEDRP 1010
AFELY+DMIRQG IPDLGTFVHLIMGL+KVSRW+EALQL DSICQMDINWLQ+ED P
Sbjct: 961 AFELYNDMIRQGVIPDLGTFVHLIMGLVKVSRWEEALQLSDSICQMDINWLQREDAP 1015
BLAST of Sed0021713 vs. NCBI nr
Match:
XP_022929904.1 (pentatricopeptide repeat-containing protein At1g06710, mitochondrial [Cucurbita moschata] >XP_022929905.1 pentatricopeptide repeat-containing protein At1g06710, mitochondrial [Cucurbita moschata])
HSP 1 Score: 1767.7 bits (4577), Expect = 0.0e+00
Identity = 873/1015 (86.01%), Postives = 939/1015 (92.51%), Query Frame = 0
Query: 1 MSRRGLKSLKSLSISFLSSPIRSNNEVFSTNPFHICFDSSRAA----NLHRQTLSSAIAK 60
MSRRGLKSL LS+S +SSPIRS N +FS +PF + DS RAA L+R T SS+IA
Sbjct: 1 MSRRGLKSLHFLSLSLISSPIRS-NPIFSFHPFPVYSDSFRAALPNITLYRPTPSSSIAH 60
Query: 61 YSTSSPDDLEGLVDPDGSIPSEVSRVE----SEIALLRDSLLDSHAESCSSERTLEIGKV 120
+ST SPDDL+GLVDPD S+PSE SR E E++LLR SLLDSHA+S SSE TL+ GK+
Sbjct: 61 FST-SPDDLQGLVDPDESLPSEGSRAECFSAPEVSLLRGSLLDSHADSPSSEPTLKSGKI 120
Query: 121 SIEAVSILDAIRNSDDGFGEKTQKLLRQFRQKLNPDLVVEILSLLKSPELCVKLFLWVGR 180
S +A+SILD IRNSDDGFG+KTQKLLRQFRQ LNPDLVVEIL LL++PELCVK FLW GR
Sbjct: 121 SNDAISILDTIRNSDDGFGDKTQKLLRQFRQNLNPDLVVEILGLLRNPELCVKFFLWAGR 180
Query: 181 QIGYNHTASVYKALLDVFEFGSYDRVPDQFLREIKGDDREVLEKLLNVLIRKCCRNGLWN 240
QIGYNHTASVY ALLDV+E GSYDRVP+QFLREIK DD+EVL KLLNVLIRKCCRNG WN
Sbjct: 181 QIGYNHTASVYNALLDVYECGSYDRVPEQFLREIKDDDKEVLGKLLNVLIRKCCRNGFWN 240
Query: 241 LALEELGRLKDFGYKPTRVTYNALIQVFLRADKLDTAHLVHREMSELGFSMDEFTLGFFA 300
+ALEELGRLKDFGYKPTR+TYNALIQVFLRADKLDTA+LVHREMSELGF+MDEFTLG FA
Sbjct: 241 VALEELGRLKDFGYKPTRLTYNALIQVFLRADKLDTAYLVHREMSELGFNMDEFTLGRFA 300
Query: 301 QALCKVGRWRDALLLVEKEDIVPNTILYTKMISGLCEASNFEEAMDFLNRMRSSSCIPNV 360
QALCKVG+WR+AL L+EKED VPNTILYTKMISGLC AS FEEAMDFLNRMRSSSCIPN
Sbjct: 301 QALCKVGKWREALSLIEKEDFVPNTILYTKMISGLCNASFFEEAMDFLNRMRSSSCIPNA 360
Query: 361 QTYKILLCGCLNKNQLGRCKRILSMMIAEGCFPTYRIFSSLVHAYCKTGDFSYAYKLLKK 420
QTYKILLCGCLNK QLGRCKRILSMMIAEGCFP+Y IF+SLVHAYCK+GDFSYAYKLLKK
Sbjct: 361 QTYKILLCGCLNKKQLGRCKRILSMMIAEGCFPSYTIFNSLVHAYCKSGDFSYAYKLLKK 420
Query: 421 MEKCECKPGYVIYNILIGGICSGQELPGPRSFELAEKAYDEMLSAGTVLNKVNVVSFARC 480
MEKCECKPGYV+YNI IGGIC+G+ELPGP +FELAEKAY+EM S+GTVLNKVNVVSFARC
Sbjct: 421 MEKCECKPGYVVYNIFIGGICNGKELPGPITFELAEKAYNEMCSSGTVLNKVNVVSFARC 480
Query: 481 LCGFGKFEKAYKVIHEMMGNGFIPDTSTYSEVIGFLCNHSRVEKAFLLFKEMKGTGVVPD 540
LCGFGKFE+AYKVIHEMMGNGFIPD STYSEVIGF+CN SRVE AFLLFKEMKG G+VPD
Sbjct: 481 LCGFGKFEEAYKVIHEMMGNGFIPDRSTYSEVIGFMCNASRVENAFLLFKEMKGAGMVPD 540
Query: 541 VYTYTILIDCFSKAGFIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFE 600
VYTYTILIDCFSKAG I+QAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFE
Sbjct: 541 VYTYTILIDCFSKAGLIQQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFE 600
Query: 601 LMIAKGCVPNVITYTALIDGYCKSGNIEKACQIYARMRGEADIPDVDMYFKTENNLSEKP 660
+MIAKGC+PNVITYTALIDGYCKSGNIEKACQIYARMRG+ADIPDVDMYFKTENN+SEKP
Sbjct: 601 VMIAKGCIPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKTENNVSEKP 660
Query: 661 NVVTYGALVDGLCKAHKVKDARDLLETMFVEGCEPNDIVYDALIDGFCKAANLDKAQEVF 720
NVVTYGALVDGLCKAHKVKDA DLLETMF+EGCEPN+IVYDALIDGFCKAA LD+AQEVF
Sbjct: 661 NVVTYGALVDGLCKAHKVKDACDLLETMFLEGCEPNNIVYDALIDGFCKAAKLDEAQEVF 720
Query: 721 SKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLSKA 780
KMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNVVIYTEMIDGL K
Sbjct: 721 VKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLCKV 780
Query: 781 AKTEEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTY 840
AKT+EAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGC+PNFVTY
Sbjct: 781 AKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCSPNFVTY 840
Query: 841 AVMINHCCSTGCLDEAYALLVEMKQTYWPKHISSYCKVIEGYKREFVLSLGLLEEVEKND 900
V+INHCC++G LDEAYALL EMKQTYWPKH+SSYCKV+EGY REF+LSLGLLEEVEKND
Sbjct: 841 TVLINHCCASGRLDEAYALLDEMKQTYWPKHVSSYCKVVEGYNREFILSLGLLEEVEKND 900
Query: 901 SAPVILLYRVLIDDFIKAGRLEVALELHKEVISASMPMAAKKNMYTTLIYSFSTATKTGQ 960
+ P+ILLYRVLID+F+KAGRLEVALELHKEVISASM MAAKKNMYTTLIYSFSTA K Q
Sbjct: 901 ATPIILLYRVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNMYTTLIYSFSTAMKIDQ 960
Query: 961 AFELYSDMIRQGAIPDLGTFVHLIMGLIKVSRWDEALQLLDSICQMDINWLQQED 1008
AFELY+DMIRQG IPDLGTFV LIMGL+KV RW+EALQL DSICQMDINWLQ+ED
Sbjct: 961 AFELYNDMIRQGVIPDLGTFVDLIMGLVKVRRWEEALQLSDSICQMDINWLQRED 1013
BLAST of Sed0021713 vs. NCBI nr
Match:
XP_038884804.1 (pentatricopeptide repeat-containing protein At1g06710, mitochondrial [Benincasa hispida])
HSP 1 Score: 1763.0 bits (4565), Expect = 0.0e+00
Identity = 868/1013 (85.69%), Postives = 936/1013 (92.40%), Query Frame = 0
Query: 1 MSRRGLKSLKSLSISFLSSPIRSNNEVFSTNPFHICFDSSRAANLHRQTLSSAIAKYSTS 60
MSRRGLKSL+ LS+SF+SSP RS N VFS+NPF I SS +++RQTLSS IA +STS
Sbjct: 1 MSRRGLKSLQFLSVSFVSSPFRS-NAVFSSNPFPIFSHSS--VSVYRQTLSSPIAHHSTS 60
Query: 61 SPDDLEGLVDPDGSIPSEVSRVE----SEIALLRDSLLDSHAESCSSERTLEIGKVSIEA 120
DDL+GLVDPD S+ S+ SRV+ E++ LRDSLLDSHA+S S ++TL+ GK+S EA
Sbjct: 61 PSDDLKGLVDPDESLSSDSSRVQCFSPQEVSFLRDSLLDSHADSGSLDQTLDTGKISNEA 120
Query: 121 VSILDAIRNSDDGFGEKTQKLLRQFRQKLNPDLVVEILSLLKSPELCVKLFLWVGRQIGY 180
+SILDAIRN DDGFG+KT KLLRQFRQKLNPDLVVEILSLL S ELCVK FLW GRQIGY
Sbjct: 121 ISILDAIRNCDDGFGDKTYKLLRQFRQKLNPDLVVEILSLLGSRELCVKFFLWAGRQIGY 180
Query: 181 NHTASVYKALLDVFEFGSYDRVPDQFLREIKGDDREVLEKLLNVLIRKCCRNGLWNLALE 240
NHT SVY ALLDV+E G+YD VP+QFL EIK D++VL KLLNV IRKCCRNGLWN+ALE
Sbjct: 181 NHTPSVYNALLDVYERGTYDPVPEQFLLEIKSADKKVLGKLLNVSIRKCCRNGLWNIALE 240
Query: 241 ELGRLKDFGYKPTRVTYNALIQVFLRADKLDTAHLVHREMSELGFSMDEFTLGFFAQALC 300
ELGRLKDFGYKPTR+TYNALIQVFLRADKLDTAHLVHREM+ELGFSMDEFTLGFF QALC
Sbjct: 241 ELGRLKDFGYKPTRLTYNALIQVFLRADKLDTAHLVHREMAELGFSMDEFTLGFFVQALC 300
Query: 301 KVGRWRDALLLVEKEDIVPNTILYTKMISGLCEASNFEEAMDFLNRMRSSSCIPNVQTYK 360
KVG+WR+AL L+EKED VPNTILY KMISGLCEAS FEEAMDFLNRMRSSSCIPN QT+K
Sbjct: 301 KVGKWREALSLIEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSSSCIPNDQTFK 360
Query: 361 ILLCGCLNKNQLGRCKRILSMMIAEGCFPTYRIFSSLVHAYCKTGDFSYAYKLLKKMEKC 420
ILLCGCLNK QLGRCKRILSMMIAEGCFP+Y IF+SLVHAYCK+GDFSYAYKLLKKMEKC
Sbjct: 361 ILLCGCLNKKQLGRCKRILSMMIAEGCFPSYTIFNSLVHAYCKSGDFSYAYKLLKKMEKC 420
Query: 421 ECKPGYVIYNILIGGICSGQELPGPRSFELAEKAYDEMLSAGTVLNKVNVVSFARCLCGF 480
ECKPGYV+YNILIG ICSG+ELPGP +FELAEKAY+EMLSAGTVLNKVNVVSFARCLCGF
Sbjct: 421 ECKPGYVVYNILIGSICSGEELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGF 480
Query: 481 GKFEKAYKVIHEMMGNGFIPDTSTYSEVIGFLCNHSRVEKAFLLFKEMKGTGVVPDVYTY 540
GKFEKA+KVIHEM+GNGFIPDTSTYSE IGFLCN SRVE AFLLFKEMKGTGVVPDVYTY
Sbjct: 481 GKFEKAHKVIHEMVGNGFIPDTSTYSEAIGFLCNASRVENAFLLFKEMKGTGVVPDVYTY 540
Query: 541 TILIDCFSKAGFIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIA 600
TILIDCFSKAG IKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVS+ANELFELMIA
Sbjct: 541 TILIDCFSKAGLIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSIANELFELMIA 600
Query: 601 KGCVPNVITYTALIDGYCKSGNIEKACQIYARMRGEADIPDVDMYFKTENNLSEKPNVVT 660
KGC+PNVITYTALIDGYCKSGNIEKACQIYARMRG+ +IPDVDMYFK ENN++EKPNVVT
Sbjct: 601 KGCLPNVITYTALIDGYCKSGNIEKACQIYARMRGDTNIPDVDMYFKIENNVAEKPNVVT 660
Query: 661 YGALVDGLCKAHKVKDARDLLETMFVEGCEPNDIVYDALIDGFCKAANLDKAQEVFSKMV 720
YGALVDGLCKAHKVKDARDLLETMFVEGCEPN IVYDALIDGFCKA LD+AQEVF KMV
Sbjct: 661 YGALVDGLCKAHKVKDARDLLETMFVEGCEPNTIVYDALIDGFCKAGKLDEAQEVFRKMV 720
Query: 721 ERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLSKAAKTE 780
ERGYNPNVYTYSSLIDRLFKDKRLDLVLK+LSKMLENSCAPNVVIYTEMIDGLSK AKT+
Sbjct: 721 ERGYNPNVYTYSSLIDRLFKDKRLDLVLKMLSKMLENSCAPNVVIYTEMIDGLSKVAKTD 780
Query: 781 EAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYAVMI 840
EAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTY V+I
Sbjct: 781 EAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLI 840
Query: 841 NHCCSTGCLDEAYALLVEMKQTYWPKHISSYCKVIEGYKREFVLSLGLLEEVEKNDSAPV 900
NHCC+ G LDEAYALL EMKQTYWPKH+SSYCKVIEGYKREF+LSLGLLEEVEKNDSAP+
Sbjct: 841 NHCCAAGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKREFILSLGLLEEVEKNDSAPI 900
Query: 901 ILLYRVLIDDFIKAGRLEVALELHKEVISASMPMAAKKNMYTTLIYSFSTATKTGQAFEL 960
ILLYRVLID+F+KAGRLE+A++LHKEVISASMPMAAKKNMYTTLI SFS TK GQAFEL
Sbjct: 901 ILLYRVLIDNFVKAGRLELAMDLHKEVISASMPMAAKKNMYTTLIQSFSNTTKIGQAFEL 960
Query: 961 YSDMIRQGAIPDLGTFVHLIMGLIKVSRWDEALQLLDSICQMDINWLQQEDRP 1010
+ DM+R+GAIPDLGTFVHLI+GL + SRW+EALQL DSICQMDINWLQ+ED P
Sbjct: 961 FYDMLREGAIPDLGTFVHLILGLTRASRWEEALQLSDSICQMDINWLQREDTP 1010
BLAST of Sed0021713 vs. NCBI nr
Match:
XP_023549324.1 (pentatricopeptide repeat-containing protein At1g06710, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023549325.1 pentatricopeptide repeat-containing protein At1g06710, mitochondrial [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1760.3 bits (4558), Expect = 0.0e+00
Identity = 868/1015 (85.52%), Postives = 938/1015 (92.41%), Query Frame = 0
Query: 1 MSRRGLKSLKSLSISFLSSPIRSNNEVFSTNPFHICFDSSRAA----NLHRQTLSSAIAK 60
MSRRGLKSL LS+S +SSPIRS N +FS +PF + DS RAA L+R T SS+IA
Sbjct: 1 MSRRGLKSLHFLSLSLISSPIRS-NPIFSFHPFPVYSDSFRAALANITLYRPTPSSSIAH 60
Query: 61 YSTSSPDDLEGLVDPDGSIPSEVSRVE----SEIALLRDSLLDSHAESCSSERTLEIGKV 120
+ST SPDDL+GLVDPD S+PSE SR E E++LLRDSLLDSHA+S SSE TL+ G +
Sbjct: 61 FST-SPDDLQGLVDPDESLPSEGSRAECFSAPELSLLRDSLLDSHADSPSSEPTLKSGNI 120
Query: 121 SIEAVSILDAIRNSDDGFGEKTQKLLRQFRQKLNPDLVVEILSLLKSPELCVKLFLWVGR 180
S +A+SILD IRN+DDGFG+KTQ+LLR+FRQ LNPDLVVEIL LL++PELCVK FLW GR
Sbjct: 121 SNDAISILDTIRNTDDGFGDKTQRLLRRFRQNLNPDLVVEILGLLRNPELCVKFFLWAGR 180
Query: 181 QIGYNHTASVYKALLDVFEFGSYDRVPDQFLREIKGDDREVLEKLLNVLIRKCCRNGLWN 240
QIGYNHTASVY ALLDV+E GSYDRVP++FLREIK DD+EVL KLLNVLIRKCCRNG WN
Sbjct: 181 QIGYNHTASVYNALLDVYECGSYDRVPEKFLREIKDDDKEVLGKLLNVLIRKCCRNGFWN 240
Query: 241 LALEELGRLKDFGYKPTRVTYNALIQVFLRADKLDTAHLVHREMSELGFSMDEFTLGFFA 300
+ALEELGRLKDFGYKPTR+TYNALIQVFLRADKLDTA+LVHREMSELGF+MDEFTLG FA
Sbjct: 241 VALEELGRLKDFGYKPTRLTYNALIQVFLRADKLDTAYLVHREMSELGFNMDEFTLGLFA 300
Query: 301 QALCKVGRWRDALLLVEKEDIVPNTILYTKMISGLCEASNFEEAMDFLNRMRSSSCIPNV 360
QALCKVG+WR+AL L+EKED VPNTILYTKMISGLC+AS FEEAMDFLNRMRSSSCIPN
Sbjct: 301 QALCKVGKWREALSLIEKEDFVPNTILYTKMISGLCDASFFEEAMDFLNRMRSSSCIPNA 360
Query: 361 QTYKILLCGCLNKNQLGRCKRILSMMIAEGCFPTYRIFSSLVHAYCKTGDFSYAYKLLKK 420
QTYKILLCGCLNK QLGRCKRILSMMIAEGCFPTY IF+SLVHAYCK+GDFSYAYKLLKK
Sbjct: 361 QTYKILLCGCLNKKQLGRCKRILSMMIAEGCFPTYTIFNSLVHAYCKSGDFSYAYKLLKK 420
Query: 421 MEKCECKPGYVIYNILIGGICSGQELPGPRSFELAEKAYDEMLSAGTVLNKVNVVSFARC 480
MEKCECKPGYV+YNI IGGIC+G+ELPGP +FELAEKAY+EM S+GTVLNKVN+VSFARC
Sbjct: 421 MEKCECKPGYVVYNIFIGGICNGKELPGPITFELAEKAYNEMCSSGTVLNKVNIVSFARC 480
Query: 481 LCGFGKFEKAYKVIHEMMGNGFIPDTSTYSEVIGFLCNHSRVEKAFLLFKEMKGTGVVPD 540
LCGFGKFE+AYKVIHEMMGNGFIPDTSTYSEVIGF+CN SRVE AFLLFKEMKG G+VPD
Sbjct: 481 LCGFGKFEEAYKVIHEMMGNGFIPDTSTYSEVIGFMCNASRVENAFLLFKEMKGAGMVPD 540
Query: 541 VYTYTILIDCFSKAGFIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFE 600
VYTYTILIDCFSKAG I+QAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFE
Sbjct: 541 VYTYTILIDCFSKAGLIQQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFE 600
Query: 601 LMIAKGCVPNVITYTALIDGYCKSGNIEKACQIYARMRGEADIPDVDMYFKTENNLSEKP 660
+MIAKGC+PNVITYTALIDGY KSGNIEKACQIYARMRG+ADIPDVDMYFKTENN+SEKP
Sbjct: 601 VMIAKGCIPNVITYTALIDGYSKSGNIEKACQIYARMRGDADIPDVDMYFKTENNVSEKP 660
Query: 661 NVVTYGALVDGLCKAHKVKDARDLLETMFVEGCEPNDIVYDALIDGFCKAANLDKAQEVF 720
NVVTYGALVDGLCKAHKVKDA DLLETMF EGCEPN+IVYDALIDGFCKAA LD+AQEVF
Sbjct: 661 NVVTYGALVDGLCKAHKVKDACDLLETMFSEGCEPNNIVYDALIDGFCKAAKLDEAQEVF 720
Query: 721 SKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLSKA 780
KMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNVVIYTEMIDGL K
Sbjct: 721 VKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLCKV 780
Query: 781 AKTEEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTY 840
AKT+EAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREM SKGC+PNFVTY
Sbjct: 781 AKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMSSKGCSPNFVTY 840
Query: 841 AVMINHCCSTGCLDEAYALLVEMKQTYWPKHISSYCKVIEGYKREFVLSLGLLEEVEKND 900
V+INHCC++G LDEAYALL EMKQTYWPKH+SSYCKV+EGY REF+LSLGLLEEVEKND
Sbjct: 841 TVLINHCCASGRLDEAYALLDEMKQTYWPKHVSSYCKVVEGYNREFILSLGLLEEVEKND 900
Query: 901 SAPVILLYRVLIDDFIKAGRLEVALELHKEVISASMPMAAKKNMYTTLIYSFSTATKTGQ 960
+ P+ILLYRVLID+F+KAGRLEVALELHKEVISASM MAAKKNMYTTLIYSFS A K Q
Sbjct: 901 ATPIILLYRVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNMYTTLIYSFSKAMKIDQ 960
Query: 961 AFELYSDMIRQGAIPDLGTFVHLIMGLIKVSRWDEALQLLDSICQMDINWLQQED 1008
AFELY+DMIRQG IPDLGTFV LIMGL+KVSRW+EALQL DSICQMDINWLQ+ED
Sbjct: 961 AFELYNDMIRQGVIPDLGTFVDLIMGLVKVSRWEEALQLSDSICQMDINWLQRED 1013
BLAST of Sed0021713 vs. ExPASy Swiss-Prot
Match:
Q9M9X9 (Pentatricopeptide repeat-containing protein At1g06710, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g06710 PE=3 SV=1)
HSP 1 Score: 1169.8 bits (3025), Expect = 0.0e+00
Identity = 573/942 (60.83%), Postives = 716/942 (76.01%), Query Frame = 0
Query: 58 STSSPDDLEGLVDP-DGSIPSEVSRVESEIALLRDSLLDSHAESCSSERTLEIGKVSIEA 117
ST PDD+ G DP S EV + E + L DSL+D + + I + SI+A
Sbjct: 43 STPPPDDMFGFDDPFSPSDSREVVDLTKEYSFLHDSLVD-YGNVNVHQVVPIITQSSIDA 102
Query: 118 VSILDAIRNSDDGFGEKTQKLLRQFRQKLNPDLVVEILSLLKSPELCVKLFLWVGRQIGY 177
+I DA+ DD FG K+QK LRQFR+KL+ LV+E+L L+ P + F+W GRQIGY
Sbjct: 103 RAIADAVSGVDDVFGRKSQKFLRQFREKLSESLVIEVLRLIARPSAVISFFVWAGRQIGY 162
Query: 178 NHTASVYKALLDVFEFGSYDRVPDQFLREIKGDDREVLEKLLNVLIRKCCRNGLWNLALE 237
HTA VY AL+D+ ++VP++FL++I+ DD+EV + LNVL+RK CRNG +++ALE
Sbjct: 163 KHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALE 222
Query: 238 ELGRLKDFGYKPTRVTYNALIQVFLRADKLDTAHLVHREMSELGFSMDEFTLGFFAQALC 297
ELGRLKDF ++P+R TYN LIQ FL+AD+LD+A L+HREMS MD FTL FA +LC
Sbjct: 223 ELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLC 282
Query: 298 KVGRWRDALLLVEKEDIVPNTILYTKMISGLCEASNFEEAMDFLNRMRSSSCIPNVQTYK 357
KVG+WR+AL LVE E+ VP+T+ YTK+ISGLCEAS FEEAMDFLNRMR++SC+PNV TY
Sbjct: 283 KVGKWREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYS 342
Query: 358 ILLCGCLNKNQLGRCKRILSMMIAEGCFPTYRIFSSLVHAYCKTGDFSYAYKLLKKMEKC 417
LLCGCLNK QLGRCKR+L+MM+ EGC+P+ +IF+SLVHAYC +GD SYAYKLLKKM KC
Sbjct: 343 TLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKC 402
Query: 418 ECKPGYVIYNILIGGICSGQELPGPRSFELAEKAYDEMLSAGTVLNKVNVVSFARCLCGF 477
PGYV+YNILIG IC ++ +LAEKAY EML+AG VLNK+NV SF RCLC
Sbjct: 403 GHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSA 462
Query: 478 GKFEKAYKVIHEMMGNGFIPDTSTYSEVIGFLCNHSRVEKAFLLFKEMKGTGVVPDVYTY 537
GK+EKA+ VI EM+G GFIPDTSTYS+V+ +LCN S++E AFLLF+EMK G+V DVYTY
Sbjct: 463 GKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTY 522
Query: 538 TILIDCFSKAGFIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIA 597
TI++D F KAG I+QA W +EM GC P VVTYT LIHAYLKAKKVS ANELFE M++
Sbjct: 523 TIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLS 582
Query: 598 KGCVPNVITYTALIDGYCKSGNIEKACQIYARMRGEADIPDVDMYFKTENNLSEKPNVVT 657
+GC+PN++TY+ALIDG+CK+G +EKACQI+ RM G D+PDVDMYFK ++ SE+PNVVT
Sbjct: 583 EGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVT 642
Query: 658 YGALVDGLCKAHKVKDARDLLETMFVEGCEPNDIVYDALIDGFCKAANLDKAQEVFSKMV 717
YGAL+DG CK+H+V++AR LL+ M +EGCEPN IVYDALIDG CK LD+AQEV ++M
Sbjct: 643 YGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMS 702
Query: 718 ERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLSKAAKTE 777
E G+ +YTYSSLIDR FK KR DL KVLSKMLENSCAPNVVIYTEMIDGL K KT+
Sbjct: 703 EHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTD 762
Query: 778 EAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYAVMI 837
EAYKLM MMEEKGC+PNVVTYTAMIDGFG GK++ CLEL MGSKG APN+VTY V+I
Sbjct: 763 EAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLI 822
Query: 838 NHCCSTGCLDEAYALLVEMKQTYWPKHISSYCKVIEGYKREFVLSLGLLEEVEKNDSAPV 897
+HCC G LD A+ LL EMKQT+WP H + Y KVIEG+ +EF+ SLGLL+E+ ++D+AP
Sbjct: 823 DHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPF 882
Query: 898 ILLYRVLIDDFIKAGRLEVALELHKEVISASMPMAAKKNMYTTLIYSFSTATKTGQAFEL 957
+ +YR+LID+ IKA RLE+AL L +EV + S + + Y +LI S A K AF+L
Sbjct: 883 LSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQL 942
Query: 958 YSDMIRQGAIPDLGTFVHLIMGLIKVSRWDEALQLLDSICQM 999
+S+M ++G IP++ +F LI GL + S+ EAL LLD I M
Sbjct: 943 FSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISHM 983
BLAST of Sed0021713 vs. ExPASy Swiss-Prot
Match:
Q9SZ52 (Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PGR3 PE=1 SV=1)
HSP 1 Score: 305.1 bits (780), Expect = 3.0e-81
Identity = 230/863 (26.65%), Postives = 379/863 (43.92%), Query Frame = 0
Query: 220 VLIRKCCRNGLWNLALEELGRLKDFGYKPTRVTYNALIQVFLRADKLDTAHLVHREMSEL 279
+ IR R G N A E L R+ D G P VTY LI A KLD A V +M
Sbjct: 263 ICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTG 322
Query: 280 GFSMDEFTLGFFAQALCKVGRWRDALLL------VEKEDIVPNTILYTKMISGLCEASNF 339
D T + L + RD + +EK+ VP+ + +T ++ LC+A NF
Sbjct: 323 RHKPDRVT---YITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNF 382
Query: 340 EEAMDFLNRMRSSSCIPNVQTYKILLCGCLNKNQLGRCKRILSMMIAEGCFPTYRIFSSL 399
EA D L+ MR +PN+ TY L+CG L ++L + M + G PT +
Sbjct: 383 GEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVF 442
Query: 400 VHAYCKTGDFSYAYKLLKKMEKCECKPGYVIYNILIGGIC-SGQELPGPRSFELAEKAYD 459
+ Y K+GD A + +KM+ P V N + + +G++ A++ +
Sbjct: 443 IDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRD-------REAKQIFY 502
Query: 460 EMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFIPDTSTYSEVIGFLCNHS 519
+ G V + V +C G+ ++A K++ EMM NG PD + +I L
Sbjct: 503 GLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKAD 562
Query: 520 RVEKAFLLFKEMKGTGVVPDVYTYTILIDCFSKAGFIKQAHNWLDEMVRDGCEPTVVTYT 579
RV++A+ +F MK + P V TY L+ K G I++A + MV+ GC P +T+
Sbjct: 563 RVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFN 622
Query: 580 TLIHAYLKAKKVSVANELFELMIAKGCVPNVITYTALIDGYCKSGNIEKACQIYARMR-- 639
TL K +V++A ++ M+ GCVP+V TY +I G K+G +++A + +M+
Sbjct: 623 TLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL 682
Query: 640 ------------------------------------------------------------ 699
Sbjct: 683 VYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNA 742
Query: 700 ---------------GEADIPDVDMYFKTENNLS--------------EKPNVVTYGALV 759
G++ + + Y NN+S +P + TY L+
Sbjct: 743 VSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLI 802
Query: 760 DGLCKAHKVKDARDLLETMFVEGCEPNDIVYDALIDGFCKAANLDKAQEVFSKMVERGYN 819
GL +A ++ A+D+ + GC P+ Y+ L+D + K+ +D+ E++ +M
Sbjct: 803 GGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECE 862
Query: 820 PNVYTYSSLIDRLFK----DKRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLSKAAKTEE 879
N T++ +I L K D LDL ++S + +P Y +IDGLSK+ + E
Sbjct: 863 ANTITHNIVISGLVKAGNVDDALDLYYDLMS---DRDFSPTACTYGPLIDGLSKSGRLYE 922
Query: 880 AYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYAVMIN 939
A +L M + GC+PN Y +I+GFGKAG+ D LF+ M +G P+ TY+V+++
Sbjct: 923 AKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVD 982
Query: 940 HCCSTGCLDEAYALLVEMKQTYWPKHISSYCKVIEGYKREFVL--SLGLLEEVEKNDS-A 976
C G +DE E+K++ + Y +I G + L +L L E++ +
Sbjct: 983 CLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGIT 1042
BLAST of Sed0021713 vs. ExPASy Swiss-Prot
Match:
Q9FJE6 (Putative pentatricopeptide repeat-containing protein At5g59900 OS=Arabidopsis thaliana OX=3702 GN=At5g59900 PE=3 SV=1)
HSP 1 Score: 291.2 bits (744), Expect = 4.5e-77
Identity = 211/727 (29.02%), Postives = 338/727 (46.49%), Query Frame = 0
Query: 306 LLVEKEDIVPNTILYTKMISGLCEASNFEEAMDFLNRMRSSSCIPNVQTYKILLCGCLNK 365
+++ K ++P + ++ GL + +F AM+ N M S P+V Y ++
Sbjct: 181 MMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCEL 240
Query: 366 NQLGRCKRILSMMIAEGCFPTYRIFSSLVHAYCKTGDFSYAYKLLKKMEKCECKPGYVIY 425
L R K +++ M A GC ++ L+ CK A + K + + KP V Y
Sbjct: 241 KDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTY 300
Query: 426 NILIGGICSGQELPGPRSFELAEKAYDEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKV 485
L+ G+C QE FE+ + DEML ++ V S L GK E+A +
Sbjct: 301 CTLVYGLCKVQE------FEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNL 360
Query: 486 IHEMMGNGFIPDTSTYSEVIGFLCNHSRVEKAFLLFKEMKGTGVVPDVYTYTILIDCFSK 545
+ ++ G P+ Y+ +I LC + +A LLF M G+ P+ TY+ILID F +
Sbjct: 361 VKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCR 420
Query: 546 AGFIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCVPNVIT 605
G + A ++L EMV G + +V Y +LI+ + K +S A MI K P V+T
Sbjct: 421 RGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVT 480
Query: 606 YTALIDGYCKSGNIEKACQIYARMRGEADIPDVDMY----------------FKTENNLS 665
YT+L+ GYC G I KA ++Y M G+ P + + K N ++
Sbjct: 481 YTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMA 540
Query: 666 E---KPNVVTYGALVDGLCKAHKVKDARDLLETM-------------------------- 725
E KPN VTY +++G C+ + A + L+ M
Sbjct: 541 EWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQAS 600
Query: 726 ----FVEG-----CEPNDIVYDALIDGFCKAANLDKAQEVFSKMVERGYNPNVYTYSSLI 785
FV+G CE N+I Y L+ GFC+ L++A V +MV+RG + ++ Y LI
Sbjct: 601 EAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLI 660
Query: 786 DRLFKDKRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLSKAAKTEEAYKLMLMMEEKGCK 845
D K K L +L +M + P+ VIYT MID SK +EA+ + +M +GC
Sbjct: 661 DGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCV 720
Query: 846 PNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYAVMINHCCSTGCLDEAYAL 905
PN VTYTA+I+G KAG V++ L +M PN VTY ++ + G +D A
Sbjct: 721 PNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLD-ILTKGEVDMQKA- 780
Query: 906 LVEMKQTYWP---KHISSYCKVIEGYKREFVLSLGLLEEVEK-------NDSAPVILLYR 965
VE+ + ++Y +I G+ R+ G +EE + + +P + Y
Sbjct: 781 -VELHNAILKGLLANTATYNMLIRGFCRQ-----GRIEEASELITRMIGDGVSPDCITYT 840
Query: 966 VLIDDFIKAGRLEVALELHKEVISASMPMAAKKNMYTTLIYSFSTATKTGQAFELYSDMI 969
+I++ + ++ A+EL + + + Y TLI+ A + G+A EL ++M+
Sbjct: 841 TMINELCRRNDVKKAIELWNSMTEKG--IRPDRVAYNTLIHGCCVAGEMGKATELRNEML 891
BLAST of Sed0021713 vs. ExPASy Swiss-Prot
Match:
Q76C99 (Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=Rf1 PE=2 SV=1)
HSP 1 Score: 290.8 bits (743), Expect = 5.9e-77
Identity = 185/645 (28.68%), Postives = 307/645 (47.60%), Query Frame = 0
Query: 284 DEFTLGFFAQALCKVGRWR---DALLLVEKEDIVPNTILYTKMISGLCEASNFEEAMDF- 343
D T G C+ GR AL V K+ + I +T ++ GLC +AMD
Sbjct: 86 DLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIV 145
Query: 344 LNRMRSSSCIPNVQTYKILLCGCLNKNQLGRCKRILSMMIAE---GCFPTYRIFSSLVHA 403
L RM CIPNV +Y ILL G ++N+ +L MM + G P ++++++
Sbjct: 146 LRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVING 205
Query: 404 YCKTGDFSYAYKLLKKMEKCECKPGYVIYNILIGGICSGQELPGPRSFELAEKAYDEMLS 463
+ K GD AY +M P V YN +I +C Q +
Sbjct: 206 FFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAM------------------ 265
Query: 464 AGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFIPDTSTYSEVIGFLCNHSRVEK 523
+KA +V++ M+ NG +PD TY+ ++ C+ + ++
Sbjct: 266 -----------------------DKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKE 325
Query: 524 AFLLFKEMKGTGVVPDVYTYTILIDCFSKAGFIKQAHNWLDEMVRDGCEPTVVTYTTLIH 583
A K+M+ GV PDV TY++L+D K G +A D M + G +P + TY TL+
Sbjct: 326 AIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQ 385
Query: 584 AYLKAKKVSVANELFELMIAKGCVPNVITYTALIDGYCKSGNIEKACQIYARMRGEADIP 643
Y + + L +LM+ G P+ ++ LI Y K G +++A ++++MR +
Sbjct: 386 GYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQ---- 445
Query: 644 DVDMYFKTENNLSEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVEGCEPNDIVYDALI 703
PN VTYGA++ LCK+ +V+DA E M EG P +IVY++LI
Sbjct: 446 ------------GLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLI 505
Query: 704 DGFCKAANLDKAQEVFSKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCA 763
G C ++A+E+ +M++RG N ++S+ID K+ R+ K+ M+
Sbjct: 506 HGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVK 565
Query: 764 PNVVIYTEMIDGLSKAAKTEEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLEL 823
PNV+ Y +I+G A K +EA KL+ M G KPN VTY+ +I+G+ K +++ L L
Sbjct: 566 PNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVL 625
Query: 824 FREMGSKGCAPNFVTYAVMINHCCSTGCLDEAYALLVEMKQTYWPKHISSYCKVIEGYKR 883
F+EM S G +P+ +TY +++ T A L V + ++ +S+Y ++ G +
Sbjct: 626 FKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCK 673
Query: 884 EFVL--SLGLLEEVEKNDSAPVILLYRVLIDDFIKAGRLEVALEL 920
+ +L + + + D + ++ID +K GR + A +L
Sbjct: 686 NKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDL 673
BLAST of Sed0021713 vs. ExPASy Swiss-Prot
Match:
Q9SXD1 (Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g62670 PE=3 SV=2)
HSP 1 Score: 286.2 bits (731), Expect = 1.5e-75
Identity = 172/640 (26.88%), Postives = 284/640 (44.38%), Query Frame = 0
Query: 224 KCCRNGLWNLALEE----LGRLKDFGYKPTRVTYNALIQVFLRADKLDTAHLVHREMSEL 283
K RNGL L L++ G + P+ + ++ L+ + +K D + +M L
Sbjct: 51 KLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNL 110
Query: 284 GFSMDEFTLGFFAQALCKVGRWRDALLLVEKE---DIVPNTILYTKMISGLCEASNFEEA 343
G + +T C+ + AL ++ K PN + + +++G C + EA
Sbjct: 111 GIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEA 170
Query: 344 MDFLNRMRSSSCIPNVQTYKILLCGCLNKNQLGRCKRILSMMIAEGCFPTYRIFSSLVHA 403
+ +++M + PN T+ L+ G N+ ++ M+A+GC P + +V+
Sbjct: 171 VALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNG 230
Query: 404 YCKTGDFSYAYKLLKKMEKCECKPGYVIYNILIGGICSGQELPGPRSFELAEKAYDEMLS 463
CK GD A+ LL KME+ + +PG +IYN +I G
Sbjct: 231 LCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG------------------------- 290
Query: 464 AGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFIPDTSTYSEVIGFLCNHSRVEK 523
LC + + A + EM G P+ TYS +I LCN+ R
Sbjct: 291 ----------------LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSD 350
Query: 524 AFLLFKEMKGTGVVPDVYTYTILIDCFSKAGFIKQAHNWLDEMVRDGCEPTVVTYTTLIH 583
A L +M + PDV+T++ LID F K G + +A DEMV+ +P++VTY++LI+
Sbjct: 351 ASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLIN 410
Query: 584 AYLKAKKVSVANELFELMIAKGCVPNVITYTALIDGYCKSGNIEKACQIYARMRGEADIP 643
+ ++ A ++FE M++K C P+V+TY LI G+CK +E+ +++ M
Sbjct: 411 GFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMS------ 470
Query: 644 DVDMYFKTENNLSEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVEGCEPNDIVYDALI 703
G N + Y+ LI
Sbjct: 471 ---------------------------------------------QRGLVGNTVTYNILI 530
Query: 704 DGFCKAANLDKAQEVFSKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCA 763
G +A + D AQE+F +MV G PN+ TY++L+D L K+ +L+ + V + +
Sbjct: 531 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 590
Query: 764 PNVVIYTEMIDGLSKAAKTEEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLEL 823
P + Y MI+G+ KA K E+ + L + KG KP+VV Y MI GF + G ++ L
Sbjct: 591 PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADAL 598
Query: 824 FREMGSKGCAPNFVTYAVMINHCCSTGCLDEAYALLVEMK 857
F+EM G PN Y +I G + + L+ EM+
Sbjct: 651 FKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMR 598
BLAST of Sed0021713 vs. ExPASy TrEMBL
Match:
A0A6J1DAP3 (pentatricopeptide repeat-containing protein At1g06710, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111018584 PE=4 SV=1)
HSP 1 Score: 1778.5 bits (4605), Expect = 0.0e+00
Identity = 879/1017 (86.43%), Postives = 943/1017 (92.72%), Query Frame = 0
Query: 1 MSRRGLKSLKSLSISFLSSPIRSNNEVFSTNPFHICFDSSRAA----NLHRQTLSSAIAK 60
MSRRGLKSL+ LS SF SSP R N VFSTNP I DSSR + +++R +LSSAIAK
Sbjct: 1 MSRRGLKSLRLLSTSFNSSPFRL-NAVFSTNPSLIFSDSSRFSFGNISVYRLSLSSAIAK 60
Query: 61 YSTSSPDDLEGLVDPDGSIPSEVSRVE----SEIALLRDSLLDSHAESCSSERTLEIGKV 120
Y+TS PD+LEGLVD D S PSE SRVE E+ LRDSLLDS A+S SSE+TLEIGK+
Sbjct: 61 YTTSPPDNLEGLVDLDDSNPSESSRVECFSAQEVGFLRDSLLDSPADSGSSEKTLEIGKI 120
Query: 121 SIEAVSILDAIRNSDDGFGEKTQKLLRQFRQKLNPDLVVEILSLLKSPELCVKLFLWVGR 180
S EA+SILDAIRN DDGFG+KTQKLLRQFRQ LNPDLVVE+L+LL+SPELCV+ FLW GR
Sbjct: 121 SNEAISILDAIRNGDDGFGDKTQKLLRQFRQSLNPDLVVEVLNLLRSPELCVRFFLWAGR 180
Query: 181 QIGYNHTASVYKALLDVFEFGSYDRVPDQFLREIKGDDREVLEKLLNVLIRKCCRNGLWN 240
QIGYNHTASVY ALLDVFE +YDRVP+++LREI GDD+ VL KLLNVLIRKCCRNGLWN
Sbjct: 181 QIGYNHTASVYCALLDVFECDNYDRVPEEYLREIWGDDKVVLGKLLNVLIRKCCRNGLWN 240
Query: 241 LALEELGRLKDFGYKPTRVTYNALIQVFLRADKLDTAHLVHREMSELGFSMDEFTLGFFA 300
+ALEELGRLKDFGYKPTR+TYNALIQVFLRADKLDTAHLVHREMS+ GFSMDEFTLGFFA
Sbjct: 241 VALEELGRLKDFGYKPTRLTYNALIQVFLRADKLDTAHLVHREMSQSGFSMDEFTLGFFA 300
Query: 301 QALCKVGRWRDALLLVEKEDIVPNTILYTKMISGLCEASNFEEAMDFLNRMRSSSCIPNV 360
QALC+VG+WRDAL L+EKED VPNT+LYTKMISGLCEAS FEEAMDFLNRMRS+SCIPN
Sbjct: 301 QALCRVGKWRDALSLIEKEDFVPNTVLYTKMISGLCEASLFEEAMDFLNRMRSTSCIPNA 360
Query: 361 QTYKILLCGCLNKNQLGRCKRILSMMIAEGCFPTYRIFSSLVHAYCKTGDFSYAYKLLKK 420
QTYKILLCGCLNK QLGRCKRILSMMIAEGCFP+YRIF+SLVHAYC++GDFSYAYKLLKK
Sbjct: 361 QTYKILLCGCLNKKQLGRCKRILSMMIAEGCFPSYRIFNSLVHAYCRSGDFSYAYKLLKK 420
Query: 421 MEKCECKPGYVIYNILIGGICSGQELPGPRSFELAEKAYDEMLSAGTVLNKVNVVSFARC 480
ME C CKPGYV+YNILIGGIC +ELPGP +FELAEKAY+EMLSAGTVLNKVNVV+FARC
Sbjct: 421 MENCGCKPGYVVYNILIGGICGSEELPGPVTFELAEKAYNEMLSAGTVLNKVNVVNFARC 480
Query: 481 LCGFGKFEKAYKVIHEMMGNGFIPDTSTYSEVIGFLCNHSRVEKAFLLFKEMKGTGVVPD 540
LCGFGKFEKAYKVIHEMM NGFIPDTSTYSEVIGFLCN SRVE AFLLFKEMKGTGVVPD
Sbjct: 481 LCGFGKFEKAYKVIHEMMDNGFIPDTSTYSEVIGFLCNASRVENAFLLFKEMKGTGVVPD 540
Query: 541 VYTYTILIDCFSKAGFIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFE 600
VYTYTILIDCFSKAG IKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVS+ANELFE
Sbjct: 541 VYTYTILIDCFSKAGLIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSIANELFE 600
Query: 601 LMIAKGCVPNVITYTALIDGYCKSGNIEKACQIYARMRGEADIPDVDMYFKTENNLSEKP 660
LM+AKGC+PNVITYTALIDGYCKSGNIEKACQIY+RMRG+ DIPDVDMYFKTENN+SEKP
Sbjct: 601 LMLAKGCIPNVITYTALIDGYCKSGNIEKACQIYSRMRGDEDIPDVDMYFKTENNVSEKP 660
Query: 661 NVVTYGALVDGLCKAHKVKDARDLLETMFVEGCEPNDIVYDALIDGFCKAANLDKAQEVF 720
NVVT+GALVDGLCKAHKVKDAR+LLETMF+EGCEPN+IVYDALIDGFCKAA LD+AQEVF
Sbjct: 661 NVVTFGALVDGLCKAHKVKDARNLLETMFLEGCEPNNIVYDALIDGFCKAAKLDEAQEVF 720
Query: 721 SKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLSKA 780
+KMVERGYNPNVYTYSSLIDRLFKDKRLD VLKVLSKMLENSCAPNVVIYTEMIDGLSK
Sbjct: 721 AKMVERGYNPNVYTYSSLIDRLFKDKRLDFVLKVLSKMLENSCAPNVVIYTEMIDGLSKV 780
Query: 781 AKTEEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTY 840
AKT+EAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTY
Sbjct: 781 AKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTY 840
Query: 841 AVMINHCCSTGCLDEAYALLVEMKQTYWPKHISSYCKVIEGYKREFVLSLGLLEEVEKND 900
V+INHCC+TG LDEAYALL EMKQTYWPKHISSYCKVIEGY REF+LSLGLLEE EKND
Sbjct: 841 TVLINHCCATGFLDEAYALLDEMKQTYWPKHISSYCKVIEGYNREFILSLGLLEEAEKND 900
Query: 901 SAPVILLYRVLIDDFIKAGRLEVALELHKEVISASMPMAAKKNMYTTLIYSFSTATKTGQ 960
SAP+ILLYRVLID+FIKAGRLEVAL+LHKEVISASM MAAKKNMYT+LI+SFS ATK G
Sbjct: 901 SAPIILLYRVLIDNFIKAGRLEVALKLHKEVISASMSMAAKKNMYTSLIHSFSNATKIGH 960
Query: 961 AFELYSDMIRQGAIPDLGTFVHLIMGLIKVSRWDEALQLLDSICQMDINWLQQEDRP 1010
AFEL++DMIRQGAIPDLGTFVHLI GLIKVSRW+EALQL D ICQMDINWLQQED P
Sbjct: 961 AFELFNDMIRQGAIPDLGTFVHLITGLIKVSRWEEALQLADIICQMDINWLQQEDTP 1016
BLAST of Sed0021713 vs. ExPASy TrEMBL
Match:
A0A6J1JSJ3 (pentatricopeptide repeat-containing protein At1g06710, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111488532 PE=4 SV=1)
HSP 1 Score: 1773.8 bits (4593), Expect = 0.0e+00
Identity = 875/1017 (86.04%), Postives = 940/1017 (92.43%), Query Frame = 0
Query: 1 MSRRGLKSLKSLSISFLSSPIRSNNEVFSTNPFHICFDSSRAA----NLHRQTLSSAIAK 60
MSRRG KSL LS+S +SSP RS N +FS +PF + DS RAA L+R TLSS+IA
Sbjct: 1 MSRRGFKSLHFLSLSLISSPSRS-NPIFSFHPFPVYSDSFRAALANITLYRPTLSSSIAH 60
Query: 61 YSTSSPDDLEGLVDPDGSIPSEVSRVE----SEIALLRDSLLDSHAESCSSERTLEIGKV 120
+ST SPDDL+GLVDPD S PSE SRVE E++LLRDSLLDSHA+S SSE TL+ GK+
Sbjct: 61 FST-SPDDLQGLVDPDESFPSESSRVECFSAPEVSLLRDSLLDSHADSPSSEPTLKSGKI 120
Query: 121 SIEAVSILDAIRNSDDGFGEKTQKLLRQFRQKLNPDLVVEILSLLKSPELCVKLFLWVGR 180
S +A+SILD I NSDDGFG+KTQKLLRQFRQ LNPDLVVEIL LL++PELCVK FLW GR
Sbjct: 121 SNDAISILDTICNSDDGFGDKTQKLLRQFRQNLNPDLVVEILGLLRNPELCVKFFLWAGR 180
Query: 181 QIGYNHTASVYKALLDVFEFGSYDRVPDQFLREIKGDDREVLEKLLNVLIRKCCRNGLWN 240
QIGYNHTASVY ALLDV E GSYDRVP++FLREIK DD+EVL KLLNVLIRKCCRNG WN
Sbjct: 181 QIGYNHTASVYNALLDVCECGSYDRVPEKFLREIKDDDKEVLGKLLNVLIRKCCRNGFWN 240
Query: 241 LALEELGRLKDFGYKPTRVTYNALIQVFLRADKLDTAHLVHREMSELGFSMDEFTLGFFA 300
+ALEELGRLKDFGYKPTR+TYNALIQVFLRADKLDTA+LVHREMSELGF+MDEFTLG FA
Sbjct: 241 VALEELGRLKDFGYKPTRLTYNALIQVFLRADKLDTAYLVHREMSELGFNMDEFTLGLFA 300
Query: 301 QALCKVGRWRDALLLVEKEDIVPNTILYTKMISGLCEASNFEEAMDFLNRMRSSSCIPNV 360
QALCKVG+WR+AL L+EKED VPNTILYTKMISGLC+AS FEEAMDFLNRMRSSSCIPN
Sbjct: 301 QALCKVGKWREALSLIEKEDFVPNTILYTKMISGLCDASFFEEAMDFLNRMRSSSCIPNA 360
Query: 361 QTYKILLCGCLNKNQLGRCKRILSMMIAEGCFPTYRIFSSLVHAYCKTGDFSYAYKLLKK 420
+TYKILLCGCLNK QLGRCKRILSMMIAEGCFP+Y IF+SLVHAYCKTGDFSYAYKLLKK
Sbjct: 361 RTYKILLCGCLNKKQLGRCKRILSMMIAEGCFPSYTIFNSLVHAYCKTGDFSYAYKLLKK 420
Query: 421 MEKCECKPGYVIYNILIGGICSGQELPGPRSFELAEKAYDEMLSAGTVLNKVNVVSFARC 480
MEKCECKPGYV+YNILIGGIC+G+ELPGP +FELAEKAY+EM S+GTVLNKVNVVSFARC
Sbjct: 421 MEKCECKPGYVVYNILIGGICNGKELPGPITFELAEKAYNEMCSSGTVLNKVNVVSFARC 480
Query: 481 LCGFGKFEKAYKVIHEMMGNGFIPDTSTYSEVIGFLCNHSRVEKAFLLFKEMKGTGVVPD 540
LCGFGKFEKAYKVIHEMMGNGFIPDTSTYSEVIGF+CN SRVE AFLLFKEMKG G+VPD
Sbjct: 481 LCGFGKFEKAYKVIHEMMGNGFIPDTSTYSEVIGFMCNASRVENAFLLFKEMKGAGMVPD 540
Query: 541 VYTYTILIDCFSKAGFIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFE 600
VYTYTILIDCFSKAG I+QAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFE
Sbjct: 541 VYTYTILIDCFSKAGLIQQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFE 600
Query: 601 LMIAKGCVPNVITYTALIDGYCKSGNIEKACQIYARMRGEADIPDVDMYFKTENNLSEKP 660
+MIAKGC+PNVITYTALIDGY KSGNIE ACQIYARMRG+ADIPDVDMYFKTENN+SEKP
Sbjct: 601 VMIAKGCIPNVITYTALIDGYSKSGNIENACQIYARMRGDADIPDVDMYFKTENNVSEKP 660
Query: 661 NVVTYGALVDGLCKAHKVKDARDLLETMFVEGCEPNDIVYDALIDGFCKAANLDKAQEVF 720
NVVTYGALVDGLCKAHKVKDA DLLETMF EGCEPN+IVYDALIDGFCKAA LD+AQEVF
Sbjct: 661 NVVTYGALVDGLCKAHKVKDACDLLETMFSEGCEPNNIVYDALIDGFCKAAKLDEAQEVF 720
Query: 721 SKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLSKA 780
KMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNVVIYTEMIDGL K
Sbjct: 721 VKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLCKV 780
Query: 781 AKTEEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTY 840
AKT+EAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGC+PNFVTY
Sbjct: 781 AKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCSPNFVTY 840
Query: 841 AVMINHCCSTGCLDEAYALLVEMKQTYWPKHISSYCKVIEGYKREFVLSLGLLEEVEKND 900
V+INHCC++GCLDEAYALL EMKQTYWPKH+SSYCKV+EGY REF+LSLG+LEEVEKND
Sbjct: 841 TVLINHCCASGCLDEAYALLDEMKQTYWPKHVSSYCKVVEGYNREFILSLGILEEVEKND 900
Query: 901 SAPVILLYRVLIDDFIKAGRLEVALELHKEVISASMPMAAKKNMYTTLIYSFSTATKTGQ 960
+ P+ILLYRVLID+F+KAGRLEVALELHKEVISASM MAAKKNMYTTLIYSFS A K Q
Sbjct: 901 ATPIILLYRVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNMYTTLIYSFSKAMKIDQ 960
Query: 961 AFELYSDMIRQGAIPDLGTFVHLIMGLIKVSRWDEALQLLDSICQMDINWLQQEDRP 1010
AFELY+DMIRQG IPDLGTFVHLIMGL+KVSRW+EALQL DSICQMDINWLQ+ED P
Sbjct: 961 AFELYNDMIRQGVIPDLGTFVHLIMGLVKVSRWEEALQLSDSICQMDINWLQREDAP 1015
BLAST of Sed0021713 vs. ExPASy TrEMBL
Match:
A0A6J1EVK3 (pentatricopeptide repeat-containing protein At1g06710, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111436368 PE=4 SV=1)
HSP 1 Score: 1767.7 bits (4577), Expect = 0.0e+00
Identity = 873/1015 (86.01%), Postives = 939/1015 (92.51%), Query Frame = 0
Query: 1 MSRRGLKSLKSLSISFLSSPIRSNNEVFSTNPFHICFDSSRAA----NLHRQTLSSAIAK 60
MSRRGLKSL LS+S +SSPIRS N +FS +PF + DS RAA L+R T SS+IA
Sbjct: 1 MSRRGLKSLHFLSLSLISSPIRS-NPIFSFHPFPVYSDSFRAALPNITLYRPTPSSSIAH 60
Query: 61 YSTSSPDDLEGLVDPDGSIPSEVSRVE----SEIALLRDSLLDSHAESCSSERTLEIGKV 120
+ST SPDDL+GLVDPD S+PSE SR E E++LLR SLLDSHA+S SSE TL+ GK+
Sbjct: 61 FST-SPDDLQGLVDPDESLPSEGSRAECFSAPEVSLLRGSLLDSHADSPSSEPTLKSGKI 120
Query: 121 SIEAVSILDAIRNSDDGFGEKTQKLLRQFRQKLNPDLVVEILSLLKSPELCVKLFLWVGR 180
S +A+SILD IRNSDDGFG+KTQKLLRQFRQ LNPDLVVEIL LL++PELCVK FLW GR
Sbjct: 121 SNDAISILDTIRNSDDGFGDKTQKLLRQFRQNLNPDLVVEILGLLRNPELCVKFFLWAGR 180
Query: 181 QIGYNHTASVYKALLDVFEFGSYDRVPDQFLREIKGDDREVLEKLLNVLIRKCCRNGLWN 240
QIGYNHTASVY ALLDV+E GSYDRVP+QFLREIK DD+EVL KLLNVLIRKCCRNG WN
Sbjct: 181 QIGYNHTASVYNALLDVYECGSYDRVPEQFLREIKDDDKEVLGKLLNVLIRKCCRNGFWN 240
Query: 241 LALEELGRLKDFGYKPTRVTYNALIQVFLRADKLDTAHLVHREMSELGFSMDEFTLGFFA 300
+ALEELGRLKDFGYKPTR+TYNALIQVFLRADKLDTA+LVHREMSELGF+MDEFTLG FA
Sbjct: 241 VALEELGRLKDFGYKPTRLTYNALIQVFLRADKLDTAYLVHREMSELGFNMDEFTLGRFA 300
Query: 301 QALCKVGRWRDALLLVEKEDIVPNTILYTKMISGLCEASNFEEAMDFLNRMRSSSCIPNV 360
QALCKVG+WR+AL L+EKED VPNTILYTKMISGLC AS FEEAMDFLNRMRSSSCIPN
Sbjct: 301 QALCKVGKWREALSLIEKEDFVPNTILYTKMISGLCNASFFEEAMDFLNRMRSSSCIPNA 360
Query: 361 QTYKILLCGCLNKNQLGRCKRILSMMIAEGCFPTYRIFSSLVHAYCKTGDFSYAYKLLKK 420
QTYKILLCGCLNK QLGRCKRILSMMIAEGCFP+Y IF+SLVHAYCK+GDFSYAYKLLKK
Sbjct: 361 QTYKILLCGCLNKKQLGRCKRILSMMIAEGCFPSYTIFNSLVHAYCKSGDFSYAYKLLKK 420
Query: 421 MEKCECKPGYVIYNILIGGICSGQELPGPRSFELAEKAYDEMLSAGTVLNKVNVVSFARC 480
MEKCECKPGYV+YNI IGGIC+G+ELPGP +FELAEKAY+EM S+GTVLNKVNVVSFARC
Sbjct: 421 MEKCECKPGYVVYNIFIGGICNGKELPGPITFELAEKAYNEMCSSGTVLNKVNVVSFARC 480
Query: 481 LCGFGKFEKAYKVIHEMMGNGFIPDTSTYSEVIGFLCNHSRVEKAFLLFKEMKGTGVVPD 540
LCGFGKFE+AYKVIHEMMGNGFIPD STYSEVIGF+CN SRVE AFLLFKEMKG G+VPD
Sbjct: 481 LCGFGKFEEAYKVIHEMMGNGFIPDRSTYSEVIGFMCNASRVENAFLLFKEMKGAGMVPD 540
Query: 541 VYTYTILIDCFSKAGFIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFE 600
VYTYTILIDCFSKAG I+QAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFE
Sbjct: 541 VYTYTILIDCFSKAGLIQQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFE 600
Query: 601 LMIAKGCVPNVITYTALIDGYCKSGNIEKACQIYARMRGEADIPDVDMYFKTENNLSEKP 660
+MIAKGC+PNVITYTALIDGYCKSGNIEKACQIYARMRG+ADIPDVDMYFKTENN+SEKP
Sbjct: 601 VMIAKGCIPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKTENNVSEKP 660
Query: 661 NVVTYGALVDGLCKAHKVKDARDLLETMFVEGCEPNDIVYDALIDGFCKAANLDKAQEVF 720
NVVTYGALVDGLCKAHKVKDA DLLETMF+EGCEPN+IVYDALIDGFCKAA LD+AQEVF
Sbjct: 661 NVVTYGALVDGLCKAHKVKDACDLLETMFLEGCEPNNIVYDALIDGFCKAAKLDEAQEVF 720
Query: 721 SKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLSKA 780
KMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNVVIYTEMIDGL K
Sbjct: 721 VKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLCKV 780
Query: 781 AKTEEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTY 840
AKT+EAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGC+PNFVTY
Sbjct: 781 AKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCSPNFVTY 840
Query: 841 AVMINHCCSTGCLDEAYALLVEMKQTYWPKHISSYCKVIEGYKREFVLSLGLLEEVEKND 900
V+INHCC++G LDEAYALL EMKQTYWPKH+SSYCKV+EGY REF+LSLGLLEEVEKND
Sbjct: 841 TVLINHCCASGRLDEAYALLDEMKQTYWPKHVSSYCKVVEGYNREFILSLGLLEEVEKND 900
Query: 901 SAPVILLYRVLIDDFIKAGRLEVALELHKEVISASMPMAAKKNMYTTLIYSFSTATKTGQ 960
+ P+ILLYRVLID+F+KAGRLEVALELHKEVISASM MAAKKNMYTTLIYSFSTA K Q
Sbjct: 901 ATPIILLYRVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNMYTTLIYSFSTAMKIDQ 960
Query: 961 AFELYSDMIRQGAIPDLGTFVHLIMGLIKVSRWDEALQLLDSICQMDINWLQQED 1008
AFELY+DMIRQG IPDLGTFV LIMGL+KV RW+EALQL DSICQMDINWLQ+ED
Sbjct: 961 AFELYNDMIRQGVIPDLGTFVDLIMGLVKVRRWEEALQLSDSICQMDINWLQRED 1013
BLAST of Sed0021713 vs. ExPASy TrEMBL
Match:
A0A1S3BE59 (pentatricopeptide repeat-containing protein At1g06710, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103488647 PE=4 SV=1)
HSP 1 Score: 1744.6 bits (4517), Expect = 0.0e+00
Identity = 862/1013 (85.09%), Postives = 926/1013 (91.41%), Query Frame = 0
Query: 1 MSRRGLKSLKSLSISFLSSPIRSNNEVFSTNPFHICFDSSRAANLHRQTLSSAIAKYSTS 60
MSRRGLKSL LS SF+SSPIR N +FS+NPF I + SSA A +S+S
Sbjct: 1 MSRRGLKSLHFLSFSFISSPIRF-NALFSSNPFTI------------YSHSSAFAHFSSS 60
Query: 61 SPDDLEGLVDPDGSIPSEVSRVE----SEIALLRDSLLDSHAESCSSERTLEIGKVSIEA 120
SPDDL+GLVD D S+ S+ SRV+ E++LLRDSLL+SHA+SC S+RTL+ K+S EA
Sbjct: 61 SPDDLQGLVDFDQSLSSDTSRVQCFSPQEVSLLRDSLLNSHADSCFSDRTLQAVKMSNEA 120
Query: 121 VSILDAIRNSDDGFGEKTQKLLRQFRQKLNPDLVVEILSLLKSPELCVKLFLWVGRQIGY 180
ILDAIRN DDGFGEKT +LRQFRQKLNPDLVVEILS L+SPELCVK FLW GRQIGY
Sbjct: 121 FLILDAIRNCDDGFGEKTHIVLRQFRQKLNPDLVVEILSFLRSPELCVKFFLWAGRQIGY 180
Query: 181 NHTASVYKALLDVFEFGSYDRVPDQFLREIKGDDREVLEKLLNVLIRKCCRNGLWNLALE 240
+HT +VY ALLDVFE SYDRVP++FLREIKGDD+EVL KLLNVLIRKCCRNGLWN+ALE
Sbjct: 181 SHTPAVYIALLDVFECRSYDRVPEEFLREIKGDDQEVLGKLLNVLIRKCCRNGLWNVALE 240
Query: 241 ELGRLKDFGYKPTRVTYNALIQVFLRADKLDTAHLVHREMSELGFSMDEFTLGFFAQALC 300
ELGRLKDFGYKPTR+TYNAL+QVFLRADKLDTA LVHREMSELG SMDEFTLGFFAQALC
Sbjct: 241 ELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALC 300
Query: 301 KVGRWRDALLLVEKEDIVPNTILYTKMISGLCEASNFEEAMDFLNRMRSSSCIPNVQTYK 360
KVG+WR+AL L+EKED VPNTILY KMISGLCEAS FEEAMDFLNRMRSSSCIPNVQTYK
Sbjct: 301 KVGKWREALSLIEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSSSCIPNVQTYK 360
Query: 361 ILLCGCLNKNQLGRCKRILSMMIAEGCFPTYRIFSSLVHAYCKTGDFSYAYKLLKKMEKC 420
ILLCGCLNK QLGRCKRILSMMIAEGC+P+Y IF+SLVHAYCK+ DF YAYKLLKKME C
Sbjct: 361 ILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFLYAYKLLKKMETC 420
Query: 421 ECKPGYVIYNILIGGICSGQELPGPRSFELAEKAYDEMLSAGTVLNKVNVVSFARCLCGF 480
ECKPGYV+YNILIG ICSG ELPGP +FELAEKAY+EMLSAGTVLNKVNVVSFARCLCGF
Sbjct: 421 ECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGF 480
Query: 481 GKFEKAYKVIHEMMGNGFIPDTSTYSEVIGFLCNHSRVEKAFLLFKEMKGTGVVPDVYTY 540
GKFEKAYKVIHEMMGNGF+PDTSTYSEVIGFLCN SRVE AF LFKEMKGTGV+PDVYTY
Sbjct: 481 GKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVIPDVYTY 540
Query: 541 TILIDCFSKAGFIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIA 600
TILIDCFSKAG IKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIA
Sbjct: 541 TILIDCFSKAGLIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIA 600
Query: 601 KGCVPNVITYTALIDGYCKSGNIEKACQIYARMRGEADIPDVDMYFKTENNLSEKPNVVT 660
KGC PNVITYTALIDGYCKSGNIEKACQIYARMRG+ADIPDVDMYFK +NN++EKPNVVT
Sbjct: 601 KGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVT 660
Query: 661 YGALVDGLCKAHKVKDARDLLETMFVEGCEPNDIVYDALIDGFCKAANLDKAQEVFSKMV 720
YGALVDGLCKAHKVKDARDLLETMFV+GCEPN I+YDALIDGFCKAA LD+AQEVF KMV
Sbjct: 661 YGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIIYDALIDGFCKAAKLDEAQEVFHKMV 720
Query: 721 ERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLSKAAKTE 780
ERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLSK AKT+
Sbjct: 721 ERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLSKVAKTD 780
Query: 781 EAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYAVMI 840
EAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTY V+I
Sbjct: 781 EAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLI 840
Query: 841 NHCCSTGCLDEAYALLVEMKQTYWPKHISSYCKVIEGYKREFVLSLGLLEEVEKNDSAPV 900
NHCC+TG LDEAYALL EMKQTYWPKH+SSYCKVIEGY+REF+LSLGLLEEVEKN SAP+
Sbjct: 841 NHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYRREFILSLGLLEEVEKNGSAPI 900
Query: 901 ILLYRVLIDDFIKAGRLEVALELHKEVISASMPMAAKKNMYTTLIYSFSTATKTGQAFEL 960
ILLY+VLID+F+KAGRLEVALELHKEVISASM MAAKKNMYT+LIYSFS A+K G AFEL
Sbjct: 901 ILLYKVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNMYTSLIYSFSHASKIGHAFEL 960
Query: 961 YSDMIRQGAIPDLGTFVHLIMGLIKVSRWDEALQLLDSICQMDINWLQQEDRP 1010
+ DMIR G IPDLGTFVHL+MGLI+V W+EALQL DSICQMDINWL+QED+P
Sbjct: 961 FYDMIRDGVIPDLGTFVHLLMGLIRVRMWEEALQLSDSICQMDINWLRQEDKP 1000
BLAST of Sed0021713 vs. ExPASy TrEMBL
Match:
A0A5A7V4K9 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold381G00700 PE=4 SV=1)
HSP 1 Score: 1722.6 bits (4460), Expect = 0.0e+00
Identity = 853/1002 (85.13%), Postives = 915/1002 (91.32%), Query Frame = 0
Query: 1 MSRRGLKSLKSLSISFLSSPIRSNNEVFSTNPFHICFDSSRAANLHRQTLSSAIAKYSTS 60
MSRRGLKSL LS SF+SSPIR N +FS+NPF I + SSA A +S+S
Sbjct: 1 MSRRGLKSLHFLSFSFISSPIRF-NALFSSNPFTI------------YSHSSAFAHFSSS 60
Query: 61 SPDDLEGLVDPDGSIPSEVSRVE----SEIALLRDSLLDSHAESCSSERTLEIGKVSIEA 120
SPDDL+GLVD D S+ S+ SRV+ E++LLRDSLL+SHA+SC S+RTL+ K+S EA
Sbjct: 61 SPDDLQGLVDFDQSLSSDTSRVQCFSPQEVSLLRDSLLNSHADSCFSDRTLQAVKMSNEA 120
Query: 121 VSILDAIRNSDDGFGEKTQKLLRQFRQKLNPDLVVEILSLLKSPELCVKLFLWVGRQIGY 180
ILDAIRN DDGFGEKT +LRQFRQKLNPDLVVEILS L+SPELCVK FLW GRQIGY
Sbjct: 121 FLILDAIRNCDDGFGEKTHIVLRQFRQKLNPDLVVEILSFLRSPELCVKFFLWAGRQIGY 180
Query: 181 NHTASVYKALLDVFEFGSYDRVPDQFLREIKGDDREVLEKLLNVLIRKCCRNGLWNLALE 240
+HT +VY ALLDVFE SYDRVP++FLREIKGDD+EVL KLLNVLIRKCCRNGLWN+ALE
Sbjct: 181 SHTPAVYIALLDVFECRSYDRVPEEFLREIKGDDQEVLGKLLNVLIRKCCRNGLWNVALE 240
Query: 241 ELGRLKDFGYKPTRVTYNALIQVFLRADKLDTAHLVHREMSELGFSMDEFTLGFFAQALC 300
ELGRLKDFGYKPTR+TYNAL+QVFLRADKLDTA LVHREMSELG SMDEFTLGFFAQALC
Sbjct: 241 ELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALC 300
Query: 301 KVGRWRDALLLVEKEDIVPNTILYTKMISGLCEASNFEEAMDFLNRMRSSSCIPNVQTYK 360
KVG+WR+AL L+EKED VPNTILY KMISGLCEAS FEEAMDFLNRMRSSSCIPNVQTYK
Sbjct: 301 KVGKWREALSLIEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSSSCIPNVQTYK 360
Query: 361 ILLCGCLNKNQLGRCKRILSMMIAEGCFPTYRIFSSLVHAYCKTGDFSYAYKLLKKMEKC 420
ILLCGCLNK QLGRCKRILSMMIAEGC+P+Y IF+SLVHAYCK+ DF YAYKLLKKME C
Sbjct: 361 ILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFLYAYKLLKKMETC 420
Query: 421 ECKPGYVIYNILIGGICSGQELPGPRSFELAEKAYDEMLSAGTVLNKVNVVSFARCLCGF 480
ECKPGYV+YNILIG ICSG ELPGP +FELAEKAY+EMLSAGTVLNKVNVVSFARCLCGF
Sbjct: 421 ECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGF 480
Query: 481 GKFEKAYKVIHEMMGNGFIPDTSTYSEVIGFLCNHSRVEKAFLLFKEMKGTGVVPDVYTY 540
GKFEKAYKVIHEMMGNGF+PDTSTYSEVIGFLCN SRVE AF LFKEMKGTGV+PDVYTY
Sbjct: 481 GKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVIPDVYTY 540
Query: 541 TILIDCFSKAGFIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIA 600
TILIDCFSKAG IKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIA
Sbjct: 541 TILIDCFSKAGLIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIA 600
Query: 601 KGCVPNVITYTALIDGYCKSGNIEKACQIYARMRGEADIPDVDMYFKTENNLSEKPNVVT 660
KGC PNVITYTALIDGYCKSGNIEKACQIYARMRG+ADIPDVDMYFK +NN++EKPNVVT
Sbjct: 601 KGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVT 660
Query: 661 YGALVDGLCKAHKVKDARDLLETMFVEGCEPNDIVYDALIDGFCKAANLDKAQEVFSKMV 720
YGALVDGLCKAHKVKDARDLLETMFV+GCEPN I+YDALIDGFCKAA LD+AQEVF KMV
Sbjct: 661 YGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIIYDALIDGFCKAAKLDEAQEVFHKMV 720
Query: 721 ERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLSKAAKTE 780
ERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLSK AKT+
Sbjct: 721 ERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLSKVAKTD 780
Query: 781 EAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYAVMI 840
EAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTY V+I
Sbjct: 781 EAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLI 840
Query: 841 NHCCSTGCLDEAYALLVEMKQTYWPKHISSYCKVIEGYKREFVLSLGLLEEVEKNDSAPV 900
NHCC+TG LDEAYALL EMKQTYWPKH+SSYCKVIEGY+REF+LSLGLLEEVEKN SAP+
Sbjct: 841 NHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYRREFILSLGLLEEVEKNGSAPI 900
Query: 901 ILLYRVLIDDFIKAGRLEVALELHKEVISASMPMAAKKNMYTTLIYSFSTATKTGQAFEL 960
ILLY+VLID+F+KAGRLEVALELHKEVISASM MAAKKNMYT+LIYSFS A+K G AFEL
Sbjct: 901 ILLYKVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNMYTSLIYSFSHASKIGHAFEL 960
Query: 961 YSDMIRQGAIPDLGTFVHLIMGLIKVSRWDEALQLLDSICQM 999
+ DMIR G IPDLGTFVHL+MGLI+V W+EALQL DSICQM
Sbjct: 961 FYDMIRDGVIPDLGTFVHLLMGLIRVRMWEEALQLSDSICQM 989
BLAST of Sed0021713 vs. TAIR 10
Match:
AT1G06710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 1178.7 bits (3048), Expect = 0.0e+00
Identity = 575/950 (60.53%), Postives = 723/950 (76.11%), Query Frame = 0
Query: 58 STSSPDDLEGLVDP-DGSIPSEVSRVESEIALLRDSLLDSHAESCSSERTLEIGKVSIEA 117
ST PDD+ G DP S EV + E + L DSL+D + + I + SI+A
Sbjct: 43 STPPPDDMFGFDDPFSPSDSREVVDLTKEYSFLHDSLVD-YGNVNVHQVVPIITQSSIDA 102
Query: 118 VSILDAIRNSDDGFGEKTQKLLRQFRQKLNPDLVVEILSLLKSPELCVKLFLWVGRQIGY 177
+I DA+ DD FG K+QK LRQFR+KL+ LV+E+L L+ P + F+W GRQIGY
Sbjct: 103 RAIADAVSGVDDVFGRKSQKFLRQFREKLSESLVIEVLRLIARPSAVISFFVWAGRQIGY 162
Query: 178 NHTASVYKALLDVFEFGSYDRVPDQFLREIKGDDREVLEKLLNVLIRKCCRNGLWNLALE 237
HTA VY AL+D+ ++VP++FL++I+ DD+EV + LNVL+RK CRNG +++ALE
Sbjct: 163 KHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALE 222
Query: 238 ELGRLKDFGYKPTRVTYNALIQVFLRADKLDTAHLVHREMSELGFSMDEFTLGFFAQALC 297
ELGRLKDF ++P+R TYN LIQ FL+AD+LD+A L+HREMS MD FTL FA +LC
Sbjct: 223 ELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLC 282
Query: 298 KVGRWRDALLLVEKEDIVPNTILYTKMISGLCEASNFEEAMDFLNRMRSSSCIPNVQTYK 357
KVG+WR+AL LVE E+ VP+T+ YTK+ISGLCEAS FEEAMDFLNRMR++SC+PNV TY
Sbjct: 283 KVGKWREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYS 342
Query: 358 ILLCGCLNKNQLGRCKRILSMMIAEGCFPTYRIFSSLVHAYCKTGDFSYAYKLLKKMEKC 417
LLCGCLNK QLGRCKR+L+MM+ EGC+P+ +IF+SLVHAYC +GD SYAYKLLKKM KC
Sbjct: 343 TLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKC 402
Query: 418 ECKPGYVIYNILIGGICSGQELPGPRSFELAEKAYDEMLSAGTVLNKVNVVSFARCLCGF 477
PGYV+YNILIG IC ++ +LAEKAY EML+AG VLNK+NV SF RCLC
Sbjct: 403 GHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSA 462
Query: 478 GKFEKAYKVIHEMMGNGFIPDTSTYSEVIGFLCNHSRVEKAFLLFKEMKGTGVVPDVYTY 537
GK+EKA+ VI EM+G GFIPDTSTYS+V+ +LCN S++E AFLLF+EMK G+V DVYTY
Sbjct: 463 GKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTY 522
Query: 538 TILIDCFSKAGFIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIA 597
TI++D F KAG I+QA W +EM GC P VVTYT LIHAYLKAKKVS ANELFE M++
Sbjct: 523 TIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLS 582
Query: 598 KGCVPNVITYTALIDGYCKSGNIEKACQIYARMRGEADIPDVDMYFKTENNLSEKPNVVT 657
+GC+PN++TY+ALIDG+CK+G +EKACQI+ RM G D+PDVDMYFK ++ SE+PNVVT
Sbjct: 583 EGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVT 642
Query: 658 YGALVDGLCKAHKVKDARDLLETMFVEGCEPNDIVYDALIDGFCKAANLDKAQEVFSKMV 717
YGAL+DG CK+H+V++AR LL+ M +EGCEPN IVYDALIDG CK LD+AQEV ++M
Sbjct: 643 YGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMS 702
Query: 718 ERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLSKAAKTE 777
E G+ +YTYSSLIDR FK KR DL KVLSKMLENSCAPNVVIYTEMIDGL K KT+
Sbjct: 703 EHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTD 762
Query: 778 EAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYAVMI 837
EAYKLM MMEEKGC+PNVVTYTAMIDGFG GK++ CLEL MGSKG APN+VTY V+I
Sbjct: 763 EAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLI 822
Query: 838 NHCCSTGCLDEAYALLVEMKQTYWPKHISSYCKVIEGYKREFVLSLGLLEEVEKNDSAPV 897
+HCC G LD A+ LL EMKQT+WP H + Y KVIEG+ +EF+ SLGLL+E+ ++D+AP
Sbjct: 823 DHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPF 882
Query: 898 ILLYRVLIDDFIKAGRLEVALELHKEVISASMPMAAKKNMYTTLIYSFSTATKTGQAFEL 957
+ +YR+LID+ IKA RLE+AL L +EV + S + + Y +LI S A K AF+L
Sbjct: 883 LSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQL 942
Query: 958 YSDMIRQGAIPDLGTFVHLIMGLIKVSRWDEALQLLDSICQMDINWLQQE 1007
+S+M ++G IP++ +F LI GL + S+ EAL LLD I M+I W++++
Sbjct: 943 FSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISHMEIQWIEEK 991
BLAST of Sed0021713 vs. TAIR 10
Match:
AT4G31850.1 (proton gradient regulation 3 )
HSP 1 Score: 305.1 bits (780), Expect = 2.1e-82
Identity = 230/863 (26.65%), Postives = 379/863 (43.92%), Query Frame = 0
Query: 220 VLIRKCCRNGLWNLALEELGRLKDFGYKPTRVTYNALIQVFLRADKLDTAHLVHREMSEL 279
+ IR R G N A E L R+ D G P VTY LI A KLD A V +M
Sbjct: 263 ICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTG 322
Query: 280 GFSMDEFTLGFFAQALCKVGRWRDALLL------VEKEDIVPNTILYTKMISGLCEASNF 339
D T + L + RD + +EK+ VP+ + +T ++ LC+A NF
Sbjct: 323 RHKPDRVT---YITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNF 382
Query: 340 EEAMDFLNRMRSSSCIPNVQTYKILLCGCLNKNQLGRCKRILSMMIAEGCFPTYRIFSSL 399
EA D L+ MR +PN+ TY L+CG L ++L + M + G PT +
Sbjct: 383 GEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVF 442
Query: 400 VHAYCKTGDFSYAYKLLKKMEKCECKPGYVIYNILIGGIC-SGQELPGPRSFELAEKAYD 459
+ Y K+GD A + +KM+ P V N + + +G++ A++ +
Sbjct: 443 IDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRD-------REAKQIFY 502
Query: 460 EMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFIPDTSTYSEVIGFLCNHS 519
+ G V + V +C G+ ++A K++ EMM NG PD + +I L
Sbjct: 503 GLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKAD 562
Query: 520 RVEKAFLLFKEMKGTGVVPDVYTYTILIDCFSKAGFIKQAHNWLDEMVRDGCEPTVVTYT 579
RV++A+ +F MK + P V TY L+ K G I++A + MV+ GC P +T+
Sbjct: 563 RVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFN 622
Query: 580 TLIHAYLKAKKVSVANELFELMIAKGCVPNVITYTALIDGYCKSGNIEKACQIYARMR-- 639
TL K +V++A ++ M+ GCVP+V TY +I G K+G +++A + +M+
Sbjct: 623 TLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL 682
Query: 640 ------------------------------------------------------------ 699
Sbjct: 683 VYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNA 742
Query: 700 ---------------GEADIPDVDMYFKTENNLS--------------EKPNVVTYGALV 759
G++ + + Y NN+S +P + TY L+
Sbjct: 743 VSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLI 802
Query: 760 DGLCKAHKVKDARDLLETMFVEGCEPNDIVYDALIDGFCKAANLDKAQEVFSKMVERGYN 819
GL +A ++ A+D+ + GC P+ Y+ L+D + K+ +D+ E++ +M
Sbjct: 803 GGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECE 862
Query: 820 PNVYTYSSLIDRLFK----DKRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLSKAAKTEE 879
N T++ +I L K D LDL ++S + +P Y +IDGLSK+ + E
Sbjct: 863 ANTITHNIVISGLVKAGNVDDALDLYYDLMS---DRDFSPTACTYGPLIDGLSKSGRLYE 922
Query: 880 AYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYAVMIN 939
A +L M + GC+PN Y +I+GFGKAG+ D LF+ M +G P+ TY+V+++
Sbjct: 923 AKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVD 982
Query: 940 HCCSTGCLDEAYALLVEMKQTYWPKHISSYCKVIEGYKREFVL--SLGLLEEVEKNDS-A 976
C G +DE E+K++ + Y +I G + L +L L E++ +
Sbjct: 983 CLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGIT 1042
BLAST of Sed0021713 vs. TAIR 10
Match:
AT5G59900.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 291.2 bits (744), Expect = 3.2e-78
Identity = 211/727 (29.02%), Postives = 338/727 (46.49%), Query Frame = 0
Query: 306 LLVEKEDIVPNTILYTKMISGLCEASNFEEAMDFLNRMRSSSCIPNVQTYKILLCGCLNK 365
+++ K ++P + ++ GL + +F AM+ N M S P+V Y ++
Sbjct: 181 MMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCEL 240
Query: 366 NQLGRCKRILSMMIAEGCFPTYRIFSSLVHAYCKTGDFSYAYKLLKKMEKCECKPGYVIY 425
L R K +++ M A GC ++ L+ CK A + K + + KP V Y
Sbjct: 241 KDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTY 300
Query: 426 NILIGGICSGQELPGPRSFELAEKAYDEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKV 485
L+ G+C QE FE+ + DEML ++ V S L GK E+A +
Sbjct: 301 CTLVYGLCKVQE------FEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNL 360
Query: 486 IHEMMGNGFIPDTSTYSEVIGFLCNHSRVEKAFLLFKEMKGTGVVPDVYTYTILIDCFSK 545
+ ++ G P+ Y+ +I LC + +A LLF M G+ P+ TY+ILID F +
Sbjct: 361 VKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCR 420
Query: 546 AGFIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCVPNVIT 605
G + A ++L EMV G + +V Y +LI+ + K +S A MI K P V+T
Sbjct: 421 RGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVT 480
Query: 606 YTALIDGYCKSGNIEKACQIYARMRGEADIPDVDMY----------------FKTENNLS 665
YT+L+ GYC G I KA ++Y M G+ P + + K N ++
Sbjct: 481 YTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMA 540
Query: 666 E---KPNVVTYGALVDGLCKAHKVKDARDLLETM-------------------------- 725
E KPN VTY +++G C+ + A + L+ M
Sbjct: 541 EWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQAS 600
Query: 726 ----FVEG-----CEPNDIVYDALIDGFCKAANLDKAQEVFSKMVERGYNPNVYTYSSLI 785
FV+G CE N+I Y L+ GFC+ L++A V +MV+RG + ++ Y LI
Sbjct: 601 EAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLI 660
Query: 786 DRLFKDKRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLSKAAKTEEAYKLMLMMEEKGCK 845
D K K L +L +M + P+ VIYT MID SK +EA+ + +M +GC
Sbjct: 661 DGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCV 720
Query: 846 PNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYAVMINHCCSTGCLDEAYAL 905
PN VTYTA+I+G KAG V++ L +M PN VTY ++ + G +D A
Sbjct: 721 PNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLD-ILTKGEVDMQKA- 780
Query: 906 LVEMKQTYWP---KHISSYCKVIEGYKREFVLSLGLLEEVEK-------NDSAPVILLYR 965
VE+ + ++Y +I G+ R+ G +EE + + +P + Y
Sbjct: 781 -VELHNAILKGLLANTATYNMLIRGFCRQ-----GRIEEASELITRMIGDGVSPDCITYT 840
Query: 966 VLIDDFIKAGRLEVALELHKEVISASMPMAAKKNMYTTLIYSFSTATKTGQAFELYSDMI 969
+I++ + ++ A+EL + + + Y TLI+ A + G+A EL ++M+
Sbjct: 841 TMINELCRRNDVKKAIELWNSMTEKG--IRPDRVAYNTLIHGCCVAGEMGKATELRNEML 891
BLAST of Sed0021713 vs. TAIR 10
Match:
AT1G62670.1 (rna processing factor 2 )
HSP 1 Score: 286.2 bits (731), Expect = 1.0e-76
Identity = 172/640 (26.88%), Postives = 284/640 (44.38%), Query Frame = 0
Query: 224 KCCRNGLWNLALEE----LGRLKDFGYKPTRVTYNALIQVFLRADKLDTAHLVHREMSEL 283
K RNGL L L++ G + P+ + ++ L+ + +K D + +M L
Sbjct: 51 KLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNL 110
Query: 284 GFSMDEFTLGFFAQALCKVGRWRDALLLVEKE---DIVPNTILYTKMISGLCEASNFEEA 343
G + +T C+ + AL ++ K PN + + +++G C + EA
Sbjct: 111 GIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEA 170
Query: 344 MDFLNRMRSSSCIPNVQTYKILLCGCLNKNQLGRCKRILSMMIAEGCFPTYRIFSSLVHA 403
+ +++M + PN T+ L+ G N+ ++ M+A+GC P + +V+
Sbjct: 171 VALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNG 230
Query: 404 YCKTGDFSYAYKLLKKMEKCECKPGYVIYNILIGGICSGQELPGPRSFELAEKAYDEMLS 463
CK GD A+ LL KME+ + +PG +IYN +I G
Sbjct: 231 LCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG------------------------- 290
Query: 464 AGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFIPDTSTYSEVIGFLCNHSRVEK 523
LC + + A + EM G P+ TYS +I LCN+ R
Sbjct: 291 ----------------LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSD 350
Query: 524 AFLLFKEMKGTGVVPDVYTYTILIDCFSKAGFIKQAHNWLDEMVRDGCEPTVVTYTTLIH 583
A L +M + PDV+T++ LID F K G + +A DEMV+ +P++VTY++LI+
Sbjct: 351 ASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLIN 410
Query: 584 AYLKAKKVSVANELFELMIAKGCVPNVITYTALIDGYCKSGNIEKACQIYARMRGEADIP 643
+ ++ A ++FE M++K C P+V+TY LI G+CK +E+ +++ M
Sbjct: 411 GFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMS------ 470
Query: 644 DVDMYFKTENNLSEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVEGCEPNDIVYDALI 703
G N + Y+ LI
Sbjct: 471 ---------------------------------------------QRGLVGNTVTYNILI 530
Query: 704 DGFCKAANLDKAQEVFSKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCA 763
G +A + D AQE+F +MV G PN+ TY++L+D L K+ +L+ + V + +
Sbjct: 531 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 590
Query: 764 PNVVIYTEMIDGLSKAAKTEEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLEL 823
P + Y MI+G+ KA K E+ + L + KG KP+VV Y MI GF + G ++ L
Sbjct: 591 PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADAL 598
Query: 824 FREMGSKGCAPNFVTYAVMINHCCSTGCLDEAYALLVEMK 857
F+EM G PN Y +I G + + L+ EM+
Sbjct: 651 FKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMR 598
BLAST of Sed0021713 vs. TAIR 10
Match:
AT3G06920.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 282.7 bits (722), Expect = 1.1e-75
Identity = 213/809 (26.33%), Postives = 354/809 (43.76%), Query Frame = 0
Query: 224 KCCRNGLWNLALEELGRLKDFGYKPTRVTYNALIQVFLRADKLDTAHLVHREMSELGFS- 283
K C+N L +L+ K + ++ R T N + V +A +S L F
Sbjct: 8 KFCKN-LSSLSDNGENHEKPYTFEGNRQTVNDICNVLETGPWGPSA---ENTLSALSFKP 67
Query: 284 MDEFTLGFFAQALCKVGRWRDALLLVEKEDIVPN-TILYTKMISGLCEASNFEEAMDFLN 343
EF +G + L V R + E+ +P+ Y ++ + NF+ L
Sbjct: 68 QPEFVIGVL-RRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILG 127
Query: 344 RMRSSSCIPNVQTYKILLCGCLNKNQLGRCKRILSMMIAEGCFPTYRIFSSLVHAYCKTG 403
M + P+V T ++ GC+ N+L ++ MM P + +++L+ A+
Sbjct: 128 EMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVN 187
Query: 404 DFSYAYKLLKKMEKCECKPGYVIYNILIGGICSGQELPGPRSFELAEKAYDEMLSAGTVL 463
L ++M++ +P ++ LI G + + L ++ L A VL
Sbjct: 188 HSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDS--ALSLLDEMKSSSLDADIVL 247
Query: 464 NKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFIPDTSTYSEVIGFLCNHSRVEKAFLLF 523
V + SF + GK + A+K HE+ NG PD TY+ +IG LC +R+++A +F
Sbjct: 248 YNVCIDSFGK----VGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMF 307
Query: 524 KEMKGTGVVPDVYTYTILIDCFSKAGFIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKA 583
+ ++ VP Y Y +I + AG +A++ L+ G P+V+ Y ++ K
Sbjct: 308 EHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKM 367
Query: 584 KKVSVANELFELMIAKGCVPNVITYTALIDGYCKSGNIEKACQIYARMRGEADIPDVDMY 643
KV A ++FE M K PN+ TY LID C++G ++ A ++ M+
Sbjct: 368 GKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQ----------- 427
Query: 644 FKTENNLSEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVEGCEPNDIVYDALIDGFCK 703
PNV T +VD LCK+ K+ +A + E M + C P++I + +LIDG K
Sbjct: 428 -----KAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGK 487
Query: 704 AANLDKAQEVFSKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNVVI 763
+D A +V+ KM++ N Y+SLI F R + K+ M+ +C+P++ +
Sbjct: 488 VGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQL 547
Query: 764 -----------------------------------YTEMIDGLSKAAKTEEAYKLMLMME 823
Y+ +I GL KA E Y+L M+
Sbjct: 548 LNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMK 607
Query: 824 EKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYAVMINHCCSTGCLD 883
E+GC + Y +IDGF K GKV+K +L EM +KG P VTY +I+ LD
Sbjct: 608 EQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLD 667
Query: 884 EAYALLVEMKQTYWPKHISSYCKVIEGYKREFVLSLG--LLEEVEKNDSAPVILLYRVLI 943
EAY L E K ++ Y +I+G+ + + +LEE+ + P + + L+
Sbjct: 668 EAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLL 727
Query: 944 DDFIKAGRLEVALELHKEVISASMPMAAKKNMYTTLIYSFSTATKTGQAFELYSDMIRQG 994
D +KA + AL + + + + Y LI K +AF + +M +QG
Sbjct: 728 DALVKAEEINEALVCFQSM--KELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQG 786
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_022150421.1 | 0.0e+00 | 86.43 | pentatricopeptide repeat-containing protein At1g06710, mitochondrial [Momordica ... | [more] |
| XP_022992076.1 | 0.0e+00 | 86.04 | pentatricopeptide repeat-containing protein At1g06710, mitochondrial [Cucurbita ... | [more] |
| XP_022929904.1 | 0.0e+00 | 86.01 | pentatricopeptide repeat-containing protein At1g06710, mitochondrial [Cucurbita ... | [more] |
| XP_038884804.1 | 0.0e+00 | 85.69 | pentatricopeptide repeat-containing protein At1g06710, mitochondrial [Benincasa ... | [more] |
| XP_023549324.1 | 0.0e+00 | 85.52 | pentatricopeptide repeat-containing protein At1g06710, mitochondrial [Cucurbita ... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Q9M9X9 | 0.0e+00 | 60.83 | Pentatricopeptide repeat-containing protein At1g06710, mitochondrial OS=Arabidop... | [more] |
| Q9SZ52 | 3.0e-81 | 26.65 | Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidop... | [more] |
| Q9FJE6 | 4.5e-77 | 29.02 | Putative pentatricopeptide repeat-containing protein At5g59900 OS=Arabidopsis th... | [more] |
| Q76C99 | 5.9e-77 | 28.68 | Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=Rf1 PE=2 SV... | [more] |
| Q9SXD1 | 1.5e-75 | 26.88 | Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidop... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1DAP3 | 0.0e+00 | 86.43 | pentatricopeptide repeat-containing protein At1g06710, mitochondrial OS=Momordic... | [more] |
| A0A6J1JSJ3 | 0.0e+00 | 86.04 | pentatricopeptide repeat-containing protein At1g06710, mitochondrial OS=Cucurbit... | [more] |
| A0A6J1EVK3 | 0.0e+00 | 86.01 | pentatricopeptide repeat-containing protein At1g06710, mitochondrial OS=Cucurbit... | [more] |
| A0A1S3BE59 | 0.0e+00 | 85.09 | pentatricopeptide repeat-containing protein At1g06710, mitochondrial OS=Cucumis ... | [more] |
| A0A5A7V4K9 | 0.0e+00 | 85.13 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
