Sed0021703 (gene) Chayote v1

Overview
NameSed0021703
Typegene
OrganismSechium edule (Chayote v1)
DescriptionSmall ubiquitin-related modifier
LocationLG01: 5150202 .. 5152559 (-)
RNA-Seq ExpressionSed0021703
SyntenySed0021703
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTTCGGAAATTAGAAGATTCGAACCCTAATTTGTGGAAGAAGCGAAGATCGAAGAATGTCGGGCGTCACAAACACGCAGCAGGAAGAAGACAAGAAGCCCAACGATCAATCTGCGCATATCAACCTCAAGGTTAAAGGCCAGGTTGATTTCTTACTCTTTATGTTTTTCTATCCTGCTTTTTCAGTAATTAACTTCATCCTTCAAGCCTTTAATTTTGATTTGTTTTATTTCGTCTGTTCTTGATTGCTTGGTTTGGTTTTGTATTAAGATTCTCGTTTTCTGCCTCTTGTCTTCGTTTGTACCGGCTAGGTACTGAATTTTCCCAACTTTTGAAAGAATTTAGGTATTTAAGTTTATGGGGTTTTTTTTTTTTTTTTTGATGTAACTACAAAGCCTTCTAAAATAGTGGCTGTTACTGCAAGTTCTCTTATGTGTTGAGGTTCCTCGCAATTCTTTCACTGTTTTAATTAAAGGTTCTGTTTTTTTTTGTTTCATATTAAAGGAGAATAGTATTATAACAAGAACACTGTCTCTTGGCCTTCACGAATGAATGACGTGGAATTATATATTTGTAGATAACGATCATGGAATGATCTTAATTAAGAGGGGATGAGTTCATTGGTCACGTAGTTCGGAATTAATTTCCTATGAGGTAAAACGGTCTACACTCACATATATAAAGAAATTGTACATCTGTATATATTTTATGTATCCTTGAGAAGGGTGCTGATTTGTGGCCTCTGTTTTGTGGTTATATCAAATGATGTGATTTAATTGGAGGACATGTTTATGAATGCTTAGCTCCATTCTTCTGTCTCATTTTTTTCTGTTCTAGAGTGGAGTTATTGATCCAATCTTTTTTCTTGTCTCTTGGCAAAATTCCAGGGACTGAATCAACTTGTATTTTTCATGCTCTGTTCTATTTTGTCTGTTCTCCCTTCTTCTTTTTTATAAGTTCTTTCTGCAATGATTGATTTTCCTATTCGTTTTTTGTTGTTATTTACAGTTATTCCAATTAGTTTTGATCAATTTTAGTGAGAAATAGTGTGTATAGGCTTGCAAAAAAAATTCTTTATCTCGTAGTTGTTACGCATTTGTTAGGATACGGATCTTAACCAAACTTTCATAATGACACTAAGTTATCAAGAATTCTTCGATAAACAGTAATAGTATACCATTAATATGAGCAAGAACAATAATAAAGAGATAACAAGTTAGCAAATTAAAGACAACCCCCTAGAGTGAATTCGAGAGCACCGGAAACCTCTTCCTCCAAGTTCTGAACCTTACAAAAAAAAAAAACAAGACTTCCTTCCTCTTGCCTTTCTTTCCTTATTTATTACCCAAAATCTTCTCACCATACAAGAATAACCACTTCTCTTGCTACTAAGCATTTTGTCCCCTCCACAATTCCTATTTTACCACCTCTAAAATTTGAGTATTTGGAGTCCTCACATTATAGTTATGGGATTCCTTTGGTGAGCTTATTTTTTTACGATTGTGTTTCTTTTTTTTCCTTAATAAAACTTGGTTTTCTTAAAAAAATGATGAGTTTGTTTGTATGAAAGACAAGAAAAGCTCTTAGTTACAACTTTTTGATTTATTATAGGATGGGAATGAGGTGTTCTTCAGGATCAAAAGGAGCACTCAGCTGAAGAAACTGATGAATGCTTACTGTGATCGTCAATCTGTGGATCTGAACTCCATTGCTTTCCTATTTGATGGTCGTCGTCTTCGAGCAGAGCAAACTCCAGACGAGGTACCATTTTATCTCTGATTTAAGCACTAATAGATACCCTATGTTTTAATTCCTATAATTTTTAACACAAGCATTTATTTTACCAGCTAGAGATGGAGGATGGAGATGAGATTGATGCAATGTTGCACCAGACCGGTGGAACTATGAGTTGAAACACGGCCGACTGGTTCTGTTCCTTTCGGAACCAGCATTTTCATTGCAGGTTTACAGGGATTGTAGATTCGCAAAAGACTTCCCTAAGTAGTTATATTTTCAATATGAAAACTTCCTTGACTGATTAAAGGGAGAAGATCTGTTTTAAGCTTTATCATGAAGTCTATATTATCTTCTCATATCAACTATTAACTTGGCAAGCTCTATGGATTTGATCATTCAATGATCATTAAATGTTCGGAATAATGTCATTCCAACCTGTTCATGTCATCTTCGGAATAATATGTCAACAAAGTTTATCTAAATTGAAATGTTGTGGAAGTTTGAATGTCAAAATTAAAATAAAGGTGAAAATTTAAAGATTTTGAAAGTTAACTTGATCATTCACTTCAGCTTAGTCTCATATAACACAATTTAATACATATTTTCTGTTTCTCAAATGAT

mRNA sequence

CTTTCGGAAATTAGAAGATTCGAACCCTAATTTGTGGAAGAAGCGAAGATCGAAGAATGTCGGGCGTCACAAACACGCAGCAGGAAGAAGACAAGAAGCCCAACGATCAATCTGCGCATATCAACCTCAAGGTTAAAGGCCAGGATGGGAATGAGGTGTTCTTCAGGATCAAAAGGAGCACTCAGCTGAAGAAACTGATGAATGCTTACTGTGATCGTCAATCTGTGGATCTGAACTCCATTGCTTTCCTATTTGATGGTCGTCGTCTTCGAGCAGAGCAAACTCCAGACGAGCTAGAGATGGAGGATGGAGATGAGATTGATGCAATGTTGCACCAGACCGGTGGAACTATGAGTTGAAACACGGCCGACTGGTTCTGTTCCTTTCGGAACCAGCATTTTCATTGCAGGTTTACAGGGATTGTAGATTCGCAAAAGACTTCCCTAAGTAGTTATATTTTCAATATGAAAACTTCCTTGACTGATTAAAGGGAGAAGATCTGTTTTAAGCTTTATCATGAAGTCTATATTATCTTCTCATATCAACTATTAACTTGGCAAGCTCTATGGATTTGATCATTCAATGATCATTAAATGTTCGGAATAATGTCATTCCAACCTGTTCATGTCATCTTCGGAATAATATGTCAACAAAGTTTATCTAAATTGAAATGTTGTGGAAGTTTGAATGTCAAAATTAAAATAAAGGTGAAAATTTAAAGATTTTGAAAGTTAACTTGATCATTCACTTCAGCTTAGTCTCATATAACACAATTTAATACATATTTTCTGTTTCTCAAATGAT

Coding sequence (CDS)

ATGTCGGGCGTCACAAACACGCAGCAGGAAGAAGACAAGAAGCCCAACGATCAATCTGCGCATATCAACCTCAAGGTTAAAGGCCAGGATGGGAATGAGGTGTTCTTCAGGATCAAAAGGAGCACTCAGCTGAAGAAACTGATGAATGCTTACTGTGATCGTCAATCTGTGGATCTGAACTCCATTGCTTTCCTATTTGATGGTCGTCGTCTTCGAGCAGAGCAAACTCCAGACGAGCTAGAGATGGAGGATGGAGATGAGATTGATGCAATGTTGCACCAGACCGGTGGAACTATGAGTTGA

Protein sequence

MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGTMS
Homology
[Close]
BLAST of Sed0021703 vs. NCBI nr
Match: KAG6570548.1 (Tyrosine-protein phosphatase DSP1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 196.1 bits (497), Expect = 1.5e-46
Identity = 97/98 (98.98%), Postives = 98/98 (100.00%), Query Frame = 0 

Query: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60
           MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN
Sbjct: 243 MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 302

Query: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGT 99
           SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG+
Sbjct: 303 SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS 340

[Close]
BLAST of Sed0021703 vs. NCBI nr
Match: XP_008456407.1 (PREDICTED: small ubiquitin-related modifier 1 [Cucumis melo] >KAA0054458.1 small ubiquitin-related modifier 1 [Cucumis melo var. makuwa] >TYK14581.1 small ubiquitin-related modifier 1 [Cucumis melo var. makuwa])

HSP 1 Score: 196.1 bits (497), Expect = 1.5e-46
Identity = 97/98 (98.98%), Postives = 98/98 (100.00%), Query Frame = 0 

Query: 1  MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60
          MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN
Sbjct: 1  MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60

Query: 61 SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGT 99
          SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG+
Sbjct: 61 SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS 98

[Close]
BLAST of Sed0021703 vs. NCBI nr
Match: XP_022943304.1 (small ubiquitin-related modifier 1 [Cucurbita moschata] >XP_022944672.1 small ubiquitin-related modifier 1 [Cucurbita moschata] >XP_022986048.1 small ubiquitin-related modifier 1 [Cucurbita maxima] >XP_023512038.1 small ubiquitin-related modifier 1 [Cucurbita pepo subsp. pepo] >XP_023513384.1 small ubiquitin-related modifier 1 [Cucurbita pepo subsp. pepo] >KAG6570547.1 Small ubiquitin-related modifier 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010405.1 Small ubiquitin-related modifier 2 [Cucurbita argyrosperma subsp. argyrosperma] >KAG7010406.1 Small ubiquitin-related modifier 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 196.1 bits (497), Expect = 1.5e-46
Identity = 97/98 (98.98%), Postives = 98/98 (100.00%), Query Frame = 0 

Query: 1  MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60
          MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN
Sbjct: 1  MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60

Query: 61 SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGT 99
          SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG+
Sbjct: 61 SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS 98

[Close]
BLAST of Sed0021703 vs. NCBI nr
Match: XP_004150752.1 (small ubiquitin-related modifier 1 [Cucumis sativus] >XP_038902909.1 small ubiquitin-related modifier 1-like [Benincasa hispida] >KGN46994.1 hypothetical protein Csa_020805 [Cucumis sativus])

HSP 1 Score: 196.1 bits (497), Expect = 1.5e-46
Identity = 97/98 (98.98%), Postives = 98/98 (100.00%), Query Frame = 0 

Query: 1  MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60
          MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN
Sbjct: 1  MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60

Query: 61 SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGT 99
          SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG+
Sbjct: 61 SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS 98

[Close]
BLAST of Sed0021703 vs. NCBI nr
Match: XP_022970791.1 (small ubiquitin-related modifier 1-like [Cucurbita maxima] >XP_023533825.1 small ubiquitin-related modifier 1-like [Cucurbita pepo subsp. pepo] >KAG6604755.1 Small ubiquitin-related modifier 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034883.1 Small ubiquitin-related modifier 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 194.1 bits (492), Expect = 5.7e-46
Identity = 96/98 (97.96%), Postives = 97/98 (98.98%), Query Frame = 0 

Query: 1  MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60
          MSGV NTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN
Sbjct: 1  MSGVANTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60

Query: 61 SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGT 99
          SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG+
Sbjct: 61 SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS 98

[Close]
BLAST of Sed0021703 vs. ExPASy Swiss-Prot
Match: P55852 (Small ubiquitin-related modifier 1 OS=Arabidopsis thaliana OX=3702 GN=SUMO1 PE=1 SV=2)

HSP 1 Score: 172.2 bits (435), Expect = 3.0e-42
Identity = 84/93 (90.32%), Postives = 88/93 (94.62%), Query Frame = 0 

Query: 6  NTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFL 65
          +  QEEDKKP D  AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD+NSIAFL
Sbjct: 2  SANQEEDKKPGDGGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDMNSIAFL 61

Query: 66 FDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGT 99
          FDGRRLRAEQTPDEL+MEDGDEIDAMLHQTGG+
Sbjct: 62 FDGRRLRAEQTPDELDMEDGDEIDAMLHQTGGS 94

[Close]
BLAST of Sed0021703 vs. ExPASy Swiss-Prot
Match: Q9FLP6 (Small ubiquitin-related modifier 2 OS=Arabidopsis thaliana OX=3702 GN=SUMO2 PE=1 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 3.3e-41
Identity = 85/88 (96.59%), Postives = 85/88 (96.59%), Query Frame = 0 

Query: 10 EEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGR 69
          EEDKKP DQ AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD NSIAFLFDGR
Sbjct: 6  EEDKKP-DQGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDFNSIAFLFDGR 65

Query: 70 RLRAEQTPDELEMEDGDEIDAMLHQTGG 98
          RLRAEQTPDELEMEDGDEIDAMLHQTGG
Sbjct: 66 RLRAEQTPDELEMEDGDEIDAMLHQTGG 92

[Close]
BLAST of Sed0021703 vs. ExPASy Swiss-Prot
Match: P55857 (Small ubiquitin-related modifier 1 OS=Oryza sativa subsp. japonica OX=39947 GN=SUMO1 PE=1 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 7.0e-39
Identity = 81/93 (87.10%), Postives = 84/93 (90.32%), Query Frame = 0 

Query: 10  EEDKKP---NDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLF 69
           EEDKKP       AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD+N+IAFLF
Sbjct: 6   EEDKKPAGGEGGGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDMNAIAFLF 65

Query: 70  DGRRLRAEQTPDELEMEDGDEIDAMLHQTGGTM 100
           DGRRLR EQTPDELEMEDGDEIDAMLHQTGG +
Sbjct: 66  DGRRLRGEQTPDELEMEDGDEIDAMLHQTGGCL 98

[Close]
BLAST of Sed0021703 vs. ExPASy Swiss-Prot
Match: O13351 (Ubiquitin-like protein pmt3/smt3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=pmt3 PE=1 SV=2)

HSP 1 Score: 107.5 bits (267), Expect = 9.2e-23
Identity = 52/93 (55.91%), Postives = 68/93 (73.12%), Query Frame = 0 

Query: 5   TNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAF 64
           T    ++D KP+ +  HINLKV GQD NEVFF+IK++T+  KLM  YC RQ   +NS+ F
Sbjct: 21  TGDTSQQDVKPSTE--HINLKVVGQDNNEVFFKIKKTTEFSKLMKIYCARQGKSMNSLRF 80

Query: 65  LFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG 98
           L DG R+R +QTP EL+MEDGD+I+A+L Q GG
Sbjct: 81  LVDGERIRPDQTPAELDMEDGDQIEAVLEQLGG 111

[Close]
BLAST of Sed0021703 vs. ExPASy Swiss-Prot
Match: Q9FLP5 (Small ubiquitin-related modifier 3 OS=Arabidopsis thaliana OX=3702 GN=SUMO3 PE=1 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 9.5e-20
Identity = 49/89 (55.06%), Postives = 64/89 (71.91%), Query Frame = 0 

Query: 11 EDKKPND--QSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDG 70
          +D KP D  Q AH+ LKVK QDG+EV F+ K+S  LKKLM  YCDR+ + L++ AF+F+G
Sbjct: 5  QDDKPIDQEQEAHVILKVKSQDGDEVLFKNKKSAPLKKLMYVYCDRRGLKLDAFAFIFNG 64

Query: 71 RRLRAEQTPDELEMEDGDEIDAMLHQTGG 98
           R+   +TPDEL+MEDGD IDA    +GG
Sbjct: 65 ARIGGLETPDELDMEDGDVIDACRAMSGG 93

[Close]
BLAST of Sed0021703 vs. ExPASy TrEMBL
Match: A0A6J1FTW7 (Small ubiquitin-related modifier OS=Cucurbita moschata OX=3662 GN=LOC111448116 PE=3 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 7.2e-47
Identity = 97/98 (98.98%), Postives = 98/98 (100.00%), Query Frame = 0 

Query: 1  MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60
          MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN
Sbjct: 1  MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60

Query: 61 SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGT 99
          SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG+
Sbjct: 61 SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS 98

[Close]
BLAST of Sed0021703 vs. ExPASy TrEMBL
Match: A0A5A7UHK7 (Small ubiquitin-related modifier OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G00760 PE=3 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 7.2e-47
Identity = 97/98 (98.98%), Postives = 98/98 (100.00%), Query Frame = 0 

Query: 1  MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60
          MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN
Sbjct: 1  MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60

Query: 61 SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGT 99
          SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG+
Sbjct: 61 SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS 98

[Close]
BLAST of Sed0021703 vs. ExPASy TrEMBL
Match: A0A6J1JFC9 (Small ubiquitin-related modifier OS=Cucurbita maxima OX=3661 GN=LOC111483904 PE=3 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 7.2e-47
Identity = 97/98 (98.98%), Postives = 98/98 (100.00%), Query Frame = 0 

Query: 1  MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60
          MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN
Sbjct: 1  MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60

Query: 61 SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGT 99
          SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG+
Sbjct: 61 SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS 98

[Close]
BLAST of Sed0021703 vs. ExPASy TrEMBL
Match: A0A0A0KDV8 (Small ubiquitin-related modifier OS=Cucumis sativus OX=3659 GN=Csa_6G157680 PE=3 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 7.2e-47
Identity = 97/98 (98.98%), Postives = 98/98 (100.00%), Query Frame = 0 

Query: 1  MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60
          MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN
Sbjct: 1  MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60

Query: 61 SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGT 99
          SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG+
Sbjct: 61 SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS 98

[Close]
BLAST of Sed0021703 vs. ExPASy TrEMBL
Match: A0A1S3C3V0 (Small ubiquitin-related modifier OS=Cucumis melo OX=3656 GN=LOC103496358 PE=3 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 7.2e-47
Identity = 97/98 (98.98%), Postives = 98/98 (100.00%), Query Frame = 0 

Query: 1  MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60
          MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN
Sbjct: 1  MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60

Query: 61 SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGT 99
          SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG+
Sbjct: 61 SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS 98

[Close]
BLAST of Sed0021703 vs. TAIR 10
Match: AT4G26840.1 (small ubiquitin-like modifier 1 )

HSP 1 Score: 172.2 bits (435), Expect = 2.2e-43
Identity = 84/93 (90.32%), Postives = 88/93 (94.62%), Query Frame = 0 

Query: 6  NTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFL 65
          +  QEEDKKP D  AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD+NSIAFL
Sbjct: 2  SANQEEDKKPGDGGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDMNSIAFL 61

Query: 66 FDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGT 99
          FDGRRLRAEQTPDEL+MEDGDEIDAMLHQTGG+
Sbjct: 62 FDGRRLRAEQTPDELDMEDGDEIDAMLHQTGGS 94

[Close]
BLAST of Sed0021703 vs. TAIR 10
Match: AT5G55160.1 (small ubiquitin-like modifier 2 )

HSP 1 Score: 168.7 bits (426), Expect = 2.4e-42
Identity = 85/88 (96.59%), Postives = 85/88 (96.59%), Query Frame = 0 

Query: 10 EEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGR 69
          EEDKKP DQ AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD NSIAFLFDGR
Sbjct: 6  EEDKKP-DQGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDFNSIAFLFDGR 65

Query: 70 RLRAEQTPDELEMEDGDEIDAMLHQTGG 98
          RLRAEQTPDELEMEDGDEIDAMLHQTGG
Sbjct: 66 RLRAEQTPDELEMEDGDEIDAMLHQTGG 92

[Close]
BLAST of Sed0021703 vs. TAIR 10
Match: AT5G55160.2 (small ubiquitin-like modifier 2 )

HSP 1 Score: 159.5 bits (402), Expect = 1.4e-39
Identity = 85/101 (84.16%), Postives = 85/101 (84.16%), Query Frame = 0 

Query: 10  EEDKKPNDQSAHINLKVKGQ-------------DGNEVFFRIKRSTQLKKLMNAYCDRQS 69
           EEDKKP DQ AHINLKVKGQ             DGNEVFFRIKRSTQLKKLMNAYCDRQS
Sbjct: 6   EEDKKP-DQGAHINLKVKGQAFFVVGTWLVIDTDGNEVFFRIKRSTQLKKLMNAYCDRQS 65

Query: 70  VDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG 98
           VD NSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG
Sbjct: 66  VDFNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG 105

[Close]
BLAST of Sed0021703 vs. TAIR 10
Match: AT5G55170.1 (small ubiquitin-like modifier 3 )

HSP 1 Score: 97.4 bits (241), Expect = 6.7e-21
Identity = 49/89 (55.06%), Postives = 64/89 (71.91%), Query Frame = 0 

Query: 11 EDKKPND--QSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDG 70
          +D KP D  Q AH+ LKVK QDG+EV F+ K+S  LKKLM  YCDR+ + L++ AF+F+G
Sbjct: 5  QDDKPIDQEQEAHVILKVKSQDGDEVLFKNKKSAPLKKLMYVYCDRRGLKLDAFAFIFNG 64

Query: 71 RRLRAEQTPDELEMEDGDEIDAMLHQTGG 98
           R+   +TPDEL+MEDGD IDA    +GG
Sbjct: 65 ARIGGLETPDELDMEDGDVIDACRAMSGG 93

[Close]
BLAST of Sed0021703 vs. TAIR 10
Match: AT5G55856.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 94.0 bits (232), Expect = 7.4e-20
Identity = 45/86 (52.33%), Postives = 63/86 (73.26%), Query Frame = 0 

Query: 12 DKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRL 71
          DKKP   S+HI +KVK QD   V+FRIKR  +L+K+M+AY D+  V+++++ FLFDG R+
Sbjct: 5  DKKPLIPSSHITVKVKNQDDICVYFRIKRDVELRKMMHAYSDKVGVEMSTLRFLFDGNRI 64

Query: 72 RAEQTPDELEMEDGDEIDAMLHQTGG 98
          +  QTP+EL +ED DEI+A   Q GG
Sbjct: 65 KLNQTPNELGLEDEDEIEAFGEQLGG 90

The following BLAST results are available for this feature:
BLAST of Sed0021703 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6570548.11.5e-4698.98Tyrosine-protein phosphatase DSP1, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_008456407.11.5e-4698.98PREDICTED: small ubiquitin-related modifier 1 [Cucumis melo] >KAA0054458.1 small... [more]
XP_022943304.11.5e-4698.98small ubiquitin-related modifier 1 [Cucurbita moschata] >XP_022944672.1 small ub... [more]
XP_004150752.11.5e-4698.98small ubiquitin-related modifier 1 [Cucumis sativus] >XP_038902909.1 small ubiqu... [more]
XP_022970791.15.7e-4697.96small ubiquitin-related modifier 1-like [Cucurbita maxima] >XP_023533825.1 small... [more]
BLAST of Sed0021703 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P558523.0e-4290.32Small ubiquitin-related modifier 1 OS=Arabidopsis thaliana OX=3702 GN=SUMO1 PE=1... [more]
Q9FLP63.3e-4196.59Small ubiquitin-related modifier 2 OS=Arabidopsis thaliana OX=3702 GN=SUMO2 PE=1... [more]
P558577.0e-3987.10Small ubiquitin-related modifier 1 OS=Oryza sativa subsp. japonica OX=39947 GN=S... [more]
O133519.2e-2355.91Ubiquitin-like protein pmt3/smt3 OS=Schizosaccharomyces pombe (strain 972 / ATCC... [more]
Q9FLP59.5e-2055.06Small ubiquitin-related modifier 3 OS=Arabidopsis thaliana OX=3702 GN=SUMO3 PE=1... [more]
BLAST of Sed0021703 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1FTW77.2e-4798.98Small ubiquitin-related modifier OS=Cucurbita moschata OX=3662 GN=LOC111448116 P... [more]
A0A5A7UHK77.2e-4798.98Small ubiquitin-related modifier OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... [more]
A0A6J1JFC97.2e-4798.98Small ubiquitin-related modifier OS=Cucurbita maxima OX=3661 GN=LOC111483904 PE=... [more]
A0A0A0KDV87.2e-4798.98Small ubiquitin-related modifier OS=Cucumis sativus OX=3659 GN=Csa_6G157680 PE=3... [more]
A0A1S3C3V07.2e-4798.98Small ubiquitin-related modifier OS=Cucumis melo OX=3656 GN=LOC103496358 PE=3 SV... [more]
BLAST of Sed0021703 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G26840.12.2e-4390.32small ubiquitin-like modifier 1 [more]
AT5G55160.12.4e-4296.59small ubiquitin-like modifier 2 [more]
AT5G55160.21.4e-3984.16small ubiquitin-like modifier 2 [more]
AT5G55170.16.7e-2155.06small ubiquitin-like modifier 3 [more]
AT5G55856.17.4e-2052.33Ubiquitin-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000626Ubiquitin-like domainSMARTSM00213ubq_7coord: 22..93
e-value: 2.5E-14
score: 63.6
IPR000626Ubiquitin-like domainPROSITEPS50053UBIQUITIN_2coord: 20..97
score: 15.906139
IPR022617Rad60/SUMO-like domainPFAMPF11976Rad60-SLDcoord: 22..92
e-value: 5.3E-25
score: 87.0
NoneNo IPR availableGENE3D3.10.20.90coord: 1..97
e-value: 4.7E-41
score: 141.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25
NoneNo IPR availablePANTHERPTHR10562:SF87SMALL UBIQUITIN-RELATED MODIFIERcoord: 5..99
NoneNo IPR availablePANTHERPTHR10562SMALL UBIQUITIN-RELATED MODIFIERcoord: 5..99
NoneNo IPR availableCDDcd16116Ubl_Smt3_likecoord: 20..93
e-value: 9.59583E-48
score: 144.679
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 8..98

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0021703.1Sed0021703.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016925 protein sumoylation
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005634 nucleus
molecular_function GO:0031386 protein tag
molecular_function GO:0044389 ubiquitin-like protein ligase binding
molecular_function GO:0005515 protein binding