Sed0021657 (gene) Chayote v1

Overview


Name	Sed0021657
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Ras-related protein Rab-1A
Location	LG01: 69471510 .. 69474876 (-)
RNA-Seq Expression	Sed0021657
Synteny	Sed0021657

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCGCCCCTCTTCCCTTTTCTCCATTTCATCGGCGACCGATATTTCTCCGGTTAAGTTTCGCCGGCCGCTCCGTTCACCGCATCGATCTCGCCGCCTCTCATCAACGCCGGCATCTAATCTGCCATGAATCCCGAATAGTAAGCTTTATTTTCTTCCTGTGAGTTCAATTTGTCGATTCCAAGCCTCTATTTCGTTGTGTTTTTCGCTGAATTATGTTAGATCTGGTCGGTGAGGATGATTTTACGGTTTAGAATAATTCTTTGCGTTTGATGTTTTGATTAATCGGTGGTCTGCCGTTTGCTGCGATTTGGTTTGATGTCCGGATGATCGATTTGAGATCTCGATTTGTTTGCTTCTTGAGATGATTGGAGGTGTTTGAATTTCTGAAGTGCCGATTCGTTTGGATTCTTGTTTTGTTTCGAATTTCATTTCTGAAATCTGACTGTTTGGTTTGTTCGTAAATCCGTGAGGATGATCTTTTCCTCTCTCGGTGTAGGAATCTGATATTTGCTCATTCGTTCTTGTATCTGCAGTGACTATTTGTTTAAGCTTCTGCTTATCGGAGACTCGGGAGTTGGAAAATCATGTCTTTTACTGAGGTTTGCTGTAAGTTATCCGATTCATTACTTGTCGATAATTTTTTTAGTTCGACAACAATTGGGGATGGGGGATTCGGACTCATGACCAAGGTCACGATCACGAGCACACGCTTATAGTGGTGGACTATTGCTCTTATGAGCTTTTTCTTTCACACAATTGATAAATTTTGTATCCTCATTTTGTGTAATAGTAGCTCGCATAAATTTTGCATTGGTGGAGAATTATGAGTCCCAGCCAATTGGCATTTATTGAGGTTGTTAGAAGGGAAGTAGTTGTGGTGGACTAGGTATATTCACATGTTCCTTAACTAATTTCTTCTTTTTTCAAACCAGGACGATTCATATCTGGATAGTTACATTAGCACCATTGGAGTTGACTTTGTAAGCTTCCACCACCTATTTATCTTTTACTGATAGCTATCTCTGCTCTAACATTTCAACTAAACTCTTACTTGTAGAAAATCCGTACTGTTGAACAGGAGGGAAAGACCATTAAACTTCAAATTGTAAGTTTGAACTCAATATTGACCTTTATTTAGTCTATCTAAAGGTTTAATGGGCTGTTTGAGTGTTGTTTTTTCTTCCTTTCTTTTCTTCATCCTTTCTAATTTGGAAGCATGCTATGTTTCTATTTGTAAAAGTAATATTTTAGAATTGACTCTCTTTCTTTAAGAAGGAGAGAAAAAGATGAAGGGAGGAGAGGAAGGGGTTTGGATTTTATTGATAAATGCACCAATATTCAGATTTGGATTATATTGATTTGTTAAGGAGACGTTCTCAGTGGGTTTTTGGCCTTTTGGATGTTAACGGTTAATTTTCATCATCGATTGTAGTGGGACACTGCCGGTCAAGAACGTTTTAGAACGATTACTAGCAGCTACTACCGTGGAGCTCATGGCATTATTGTAATTTCTGCACTCTTCGCTGTTCACTTCTATTTCCTGCTTTTTTCAATCTTCCGAAAGTGAAGTCTGCTTGCATGCAATGTTCTGCCATGTAGGTTGTATATGACGTTACAGATCAGGATAGCTTCAACAATGTTAAGCAATGGCTGAATGAAATAGATCGATATGCAAGCGAAAGTGTGAACAAGCTTCTGGTTGGTAATAAATGTGACCTCACTGCAAATAAGGTCGTCTCTTATGAGACAGCTAAGGTAGCAATTCTACTTGGTTTCTTTGAAAAAATATACATTTCGACATTGAATATGAACGATAATATTGAAATTCAATGGTGACTAACATGATGATAACCTTTTTTAAGGCCTTTGCGGATGAAATTGGGATTCCATTCATGGAAACAAGTGCTAAAAACGCCACCAATGTGGAAGATGCTTTCATGGCCATGTCTGCAGAGATAAAGAACAGGTATTAACACCTAGAACTTTTCTGAATACTTGAATCTAGTTTTATGGTAAAGGCTGTTCAAAACATTTCAATTTTTCATCGATGAGAGTCCTTAAACTTATTCTTTCATTAATAAGAGTCTGGTCTAGTTTACACATTGAAATGATCAATTATTGGTACATACCCACTTTTGAACCTATTTTTTCTAAGTCCCTTTTTTCACGGGCCACTATGGTCACGTGGCTAACCCAGACTGATAAGTTCTCGAGCATACAAATATGATCCGTAGTTAGATAGGTAATAGAGCTTGGACCTTGAGCCTAACATACCTTTATGAGTGTCTCCAAGGGATGGCGCAGTGGTTGAAGACTTGAGCGTAAACTCCCCTTAAGGTCATGGGTTCGAGACTCACCTGTGACATTATTCCTTCGATCTCTCCGGTGTCTGGCCTAGGGACAGACGTGGTTACCTTGTTTAAAAAAAAACATACCTTTATGAGTTCAACAACAATTGGGGAAGAACTTATGACCCCTTGCCTCTTGGTACTTAGCACACACCTATGTTGGTTGATCTATCAGTCTAATACCTTTATATCGCTATCATCTTTCAGTAGTTTATGAAGTAGTGAATTGCCCTAACAACTTCTACCTCCATTCTGTAATTGTGTTGGGGGAAGCTTACATGTATTTCGATTCTCACAAAACATACGGTATGACTCTACAACATTTGGATATTAAGGAAATATGTAGGAAGCTATTTCGTCCCCAAGAAGTGGCACAATGGTTGAAGACCTGGGCTTTGAAGGTATGCTTTCCTCAAGGTTCTAGGTTCGAGATTCACTTGTGACATTACTCCTATGATGTCTCCTAGAGCCCGACCTAAGGATGAGTGTGGTTACACTTATTTCAAAAAAAAAATGTAGGAACCTATTTCCTAGATATGTGACTACCATAGATTGAACCTTTAACTGCTTGAATTTTGAAGGCTCTTTTTGAGCGCTAGGTCAACAAATAATGGTTTCTGCAGTTGCTTGACCTGGCTTTCCTTCTTTTAAACCTTTTGGGGGTTCATTTGGTATAGGATGGCGACACAGCCAATGAACAATGCAAGGCCACCAACAGTGAATATTCGAGGACAACCTGTGAATCAGAAAGGCGGTTGCTGCTCTTCTTGAAGATGACTGATGGTGATGGTGGTGTTTGTGTATCGACCGTGACATGTAAAACTAGTCGTCTCTCTATTCGTCGGTCGTGATTTGCGTTTTTTTCTTTCTTTCTTTCTTTGTCTGTTGTTAACACTTCCATTCTTTCGAATATATTTGTTTCTGGATCAACCATATTCAGCTGTAAAATTTAGATATTAATGAACAGTAGTATTTGCTTCATTTCCATTATTCATAATAATATATCTCATTCACATGAA

mRNA sequence

GCGCCCCTCTTCCCTTTTCTCCATTTCATCGGCGACCGATATTTCTCCGGTTAAGTTTCGCCGGCCGCTCCGTTCACCGCATCGATCTCGCCGCCTCTCATCAACGCCGGCATCTAATCTGCCATGAATCCCGAATATGACTATTTGTTTAAGCTTCTGCTTATCGGAGACTCGGGAGTTGGAAAATCATGTCTTTTACTGAGGTTTGCTGACGATTCATATCTGGATAGTTACATTAGCACCATTGGAGTTGACTTTAAAATCCGTACTGTTGAACAGGAGGGAAAGACCATTAAACTTCAAATTTGGGACACTGCCGGTCAAGAACGTTTTAGAACGATTACTAGCAGCTACTACCGTGGAGCTCATGGCATTATTGTTGTATATGACGTTACAGATCAGGATAGCTTCAACAATGTTAAGCAATGGCTGAATGAAATAGATCGATATGCAAGCGAAAGTGTGAACAAGCTTCTGGTTGGTAATAAATGTGACCTCACTGCAAATAAGGTCGTCTCTTATGAGACAGCTAAGGCCTTTGCGGATGAAATTGGGATTCCATTCATGGAAACAAGTGCTAAAAACGCCACCAATGTGGAAGATGCTTTCATGGCCATGTCTGCAGAGATAAAGAACAGGATGGCGACACAGCCAATGAACAATGCAAGGCCACCAACAGTGAATATTCGAGGACAACCTGTGAATCAGAAAGGCGGTTGCTGCTCTTCTTGAAGATGACTGATGGTGATGGTGGTGTTTGTGTATCGACCGTGACATGTAAAACTAGTCGTCTCTCTATTCGTCGGTCGTGATTTGCGTTTTTTTCTTTCTTTCTTTCTTTGTCTGTTGTTAACACTTCCATTCTTTCGAATATATTTGTTTCTGGATCAACCATATTCAGCTGTAAAATTTAGATATTAATGAACAGTAGTATTTGCTTCATTTCCATTATTCATAATAATATATCTCATTCACATGAA

Coding sequence (CDS)

ATGAATCCCGAATATGACTATTTGTTTAAGCTTCTGCTTATCGGAGACTCGGGAGTTGGAAAATCATGTCTTTTACTGAGGTTTGCTGACGATTCATATCTGGATAGTTACATTAGCACCATTGGAGTTGACTTTAAAATCCGTACTGTTGAACAGGAGGGAAAGACCATTAAACTTCAAATTTGGGACACTGCCGGTCAAGAACGTTTTAGAACGATTACTAGCAGCTACTACCGTGGAGCTCATGGCATTATTGTTGTATATGACGTTACAGATCAGGATAGCTTCAACAATGTTAAGCAATGGCTGAATGAAATAGATCGATATGCAAGCGAAAGTGTGAACAAGCTTCTGGTTGGTAATAAATGTGACCTCACTGCAAATAAGGTCGTCTCTTATGAGACAGCTAAGGCCTTTGCGGATGAAATTGGGATTCCATTCATGGAAACAAGTGCTAAAAACGCCACCAATGTGGAAGATGCTTTCATGGCCATGTCTGCAGAGATAAAGAACAGGATGGCGACACAGCCAATGAACAATGCAAGGCCACCAACAGTGAATATTCGAGGACAACCTGTGAATCAGAAAGGCGGTTGCTGCTCTTCTTGA

Protein sequence

MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQEGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASESVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEDAFMAMSAEIKNRMATQPMNNARPPTVNIRGQPVNQKGGCCSS

Homology

[Close]

BLAST of Sed0021657 vs. NCBI nr
Match: XP_022958560.1 (ras-related protein RABD2c-like [Cucurbita moschata] >XP_022995189.1 ras-related protein RABD2c [Cucurbita maxima] >XP_023521387.1 ras-related protein RABD2c [Cucurbita pepo subsp. pepo] >XP_023533221.1 ras-related protein RABD2c [Cucurbita pepo subsp. pepo] >KAG6606206.1 Ras-related protein RABD2c, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036151.1 Ras-related protein RABD2c [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 401.4 bits (1030), Expect = 4.7e-108
Identity = 197/202 (97.52%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQEGKTIKLQ 60
           MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQ+GKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASESVNKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASE+VNKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASENVNKLLVG 120

Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEDAFMAMSAEIKNRMATQPMNN 180
           NKCDLTANKVVSYETAKAFADEIGIPFMETSAK+ATNVE+AFMAM+AEIKNRMATQPMNN
Sbjct: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRMATQPMNN 180

Query: 181 ARPPTVNIRGQPVNQKGGCCSS 203
           ARPPTVNIRGQPVNQKGGCCSS
Sbjct: 181 ARPPTVNIRGQPVNQKGGCCSS 202

[Close]

BLAST of Sed0021657 vs. NCBI nr
Match: XP_023554189.1 (GTP-binding protein YPTM2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 399.8 bits (1026), Expect = 1.4e-107
Identity = 197/202 (97.52%), Postives = 201/202 (99.50%), Query Frame = 0


Query: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQEGKTIKLQ 60
           MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQ+GKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASESVNKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASE+VNKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASENVNKLLVG 120

Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEDAFMAMSAEIKNRMATQPMNN 180
           NKCDLTANKVVSYETAKAFADEIGIPFMETSAK+ATNVEDAFMAM+AEIKNRMATQPMNN
Sbjct: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEDAFMAMAAEIKNRMATQPMNN 180

Query: 181 ARPPTVNIRGQPVNQKGGCCSS 203
           ARPPTVNIRGQPVNQK GCCSS
Sbjct: 181 ARPPTVNIRGQPVNQKTGCCSS 202

[Close]

BLAST of Sed0021657 vs. NCBI nr
Match: XP_022159480.1 (ras-related protein RABD2c [Momordica charantia])

HSP 1 Score: 399.1 bits (1024), Expect = 2.3e-107
Identity = 196/202 (97.03%), Postives = 201/202 (99.50%), Query Frame = 0


Query: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQEGKTIKLQ 60
           MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQ+GKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASESVNKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASE+VNKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASENVNKLLVG 120

Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEDAFMAMSAEIKNRMATQPMNN 180
           NKCDLTANKVVSYETAKAFADEIGIPFMETSAK+ATNVE+AFMAM+AEIKNRMATQPMNN
Sbjct: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRMATQPMNN 180

Query: 181 ARPPTVNIRGQPVNQKGGCCSS 203
           ARPPTVNIRGQPVNQK GCCSS
Sbjct: 181 ARPPTVNIRGQPVNQKAGCCSS 202

[Close]

BLAST of Sed0021657 vs. NCBI nr
Match: XP_022931789.1 (ras-related protein RABD2c [Cucurbita moschata])

HSP 1 Score: 398.3 bits (1022), Expect = 4.0e-107
Identity = 196/202 (97.03%), Postives = 201/202 (99.50%), Query Frame = 0


Query: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQEGKTIKLQ 60
           MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQ+GKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASESVNKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASE+VNKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASENVNKLLVG 120

Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEDAFMAMSAEIKNRMATQPMNN 180
           NKCDLTANKVVSYETAKAFADEIGIPFMETSAK+ATNVE+AFMAM+AEIKNRMATQPMNN
Sbjct: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRMATQPMNN 180

Query: 181 ARPPTVNIRGQPVNQKGGCCSS 203
           ARPPTVNIRGQPVNQK GCCSS
Sbjct: 181 ARPPTVNIRGQPVNQKTGCCSS 202

[Close]

BLAST of Sed0021657 vs. NCBI nr
Match: XP_004148356.1 (ras-related protein RABD2c [Cucumis sativus] >XP_008465881.1 PREDICTED: ras-related protein RABD2c [Cucumis melo] >XP_038888953.1 ras-related protein RABD2c [Benincasa hispida] >KAA0038499.1 Ras-related protein RABD2c [Cucumis melo var. makuwa] >KGN60467.1 hypothetical protein Csa_000830 [Cucumis sativus] >TYK31093.1 Ras-related protein RABD2c [Cucumis melo var. makuwa])

HSP 1 Score: 397.5 bits (1020), Expect = 6.8e-107
Identity = 195/202 (96.53%), Postives = 201/202 (99.50%), Query Frame = 0


Query: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQEGKTIKLQ 60
           MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQ+GKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASESVNKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQ+SFNNVKQWLNEIDRYASE+VNKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120

Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEDAFMAMSAEIKNRMATQPMNN 180
           NKCDLTANKVVSYETAKAFADEIGIPFMETSAK+ATNVE+AFMAM+AEIKNRMATQPMNN
Sbjct: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRMATQPMNN 180

Query: 181 ARPPTVNIRGQPVNQKGGCCSS 203
           ARPPTVNIRGQPVNQK GCCSS
Sbjct: 181 ARPPTVNIRGQPVNQKSGCCSS 202

[Close]

BLAST of Sed0021657 vs. ExPASy Swiss-Prot
Match: Q9SEH3 (Ras-related protein RABD2c OS=Arabidopsis thaliana OX=3702 GN=RABD2C PE=1 SV=1)

HSP 1 Score: 367.1 bits (941), Expect = 1.3e-100
Identity = 179/202 (88.61%), Postives = 191/202 (94.55%), Query Frame = 0


Query: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQEGKTIKLQ 60
           MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQ+GKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASESVNKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGIIV YDVTD +SFNNVKQWLNEIDRYASE+VNKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQWLNEIDRYASENVNKLLVG 120

Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEDAFMAMSAEIKNRMATQPMNN 180
           NKCDLT+ KVVS ETAKAFADE+GIPF+ETSAKNATNVE+AFMAM+A IK RMA+QP   
Sbjct: 121 NKCDLTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMASQPAGG 180

Query: 181 ARPPTVNIRGQPVNQKGGCCSS 203
           ++PPTV IRGQPVNQ+ GCCSS
Sbjct: 181 SKPPTVQIRGQPVNQQSGCCSS 202

[Close]

BLAST of Sed0021657 vs. ExPASy Swiss-Prot
Match: Q9FPJ4 (Ras-related protein RABD2b OS=Arabidopsis thaliana OX=3702 GN=RABD2B PE=1 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 1.4e-99
Identity = 179/202 (88.61%), Postives = 190/202 (94.06%), Query Frame = 0


Query: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQEGKTIKLQ 60
           MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQ+GKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASESVNKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGIIV YDVTD +SFNNVKQWLNEIDRYASE+VNKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQWLNEIDRYASENVNKLLVG 120

Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEDAFMAMSAEIKNRMATQPMNN 180
           NK DLT+ KVVS ETAKAFADE+GIPF+ETSAKNATNVE+AFMAM+A IK RMA+QP   
Sbjct: 121 NKNDLTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMASQPAGG 180

Query: 181 ARPPTVNIRGQPVNQKGGCCSS 203
           A+PPTV IRGQPVNQ+ GCCSS
Sbjct: 181 AKPPTVQIRGQPVNQQSGCCSS 202

[Close]

BLAST of Sed0021657 vs. ExPASy Swiss-Prot
Match: Q05737 (GTP-binding protein YPTM2 OS=Zea mays OX=4577 GN=YPTM2 PE=2 SV=1)

HSP 1 Score: 362.5 bits (929), Expect = 3.2e-99
Identity = 181/203 (89.16%), Postives = 192/203 (94.58%), Query Frame = 0


Query: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQEGKTIKLQ 60
           MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQ+GKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASESVNKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGII+VYDVTDQ+SFNNVKQWLNEIDRYAS++VNKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVG 120

Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEDAFMAMSAEIKNRMATQP-MN 180
           NK DLTANKVV+ ETAKAFADE+GIPFMETSAKNATNV+ AFMAM+A IK+RMA+QP   
Sbjct: 121 NKSDLTANKVVATETAKAFADEMGIPFMETSAKNATNVQQAFMAMAASIKDRMASQPAAA 180

Query: 181 NARPPTVNIRGQPVNQKGGCCSS 203
           NARP TV IRGQPVNQK  CCSS
Sbjct: 181 NARPATVQIRGQPVNQKTSCCSS 203

[Close]

BLAST of Sed0021657 vs. ExPASy Swiss-Prot
Match: P28188 (Ras-related protein RABD2a OS=Arabidopsis thaliana OX=3702 GN=RABD2A PE=1 SV=3)

HSP 1 Score: 359.4 bits (921), Expect = 2.7e-98
Identity = 176/203 (86.70%), Postives = 191/203 (94.09%), Query Frame = 0


Query: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQEGKTIKLQ 60
           MNPEYDYLFKLLLIGDSGVGKSCLLLRF+DDSY++SYISTIGVDFKIRTVEQ+GKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASESVNKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGII+VYDVTD++SFNNVKQWL+EIDRYAS++VNKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVG 120

Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEDAFMAMSAEIKNRMATQPM-N 180
           NK DLT N+ + YETAKAFADEIGIPFMETSAK+ATNVE AFMAMSA IK RMA+QP  N
Sbjct: 121 NKSDLTENRAIPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASIKERMASQPAGN 180

Query: 181 NARPPTVNIRGQPVNQKGGCCSS 203
           NARPPTV IRGQPV QK GCCS+
Sbjct: 181 NARPPTVQIRGQPVAQKNGCCST 203

[Close]

BLAST of Sed0021657 vs. ExPASy Swiss-Prot
Match: P40392 (Ras-related protein RIC1 OS=Oryza sativa subsp. japonica OX=39947 GN=RIC1 PE=2 SV=2)

HSP 1 Score: 352.8 bits (904), Expect = 2.5e-96
Identity = 174/202 (86.14%), Postives = 186/202 (92.08%), Query Frame = 0


Query: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQEGKTIKLQ 60
           MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYL+SYISTIGVDFKIRTVEQ+GKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASESVNKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQ+SFNNVKQWLNEIDRYASE+VNKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120

Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEDAFMAMSAEIKNRMATQPMNN 180
           NKCDL  N+VVSYE  KA ADEIGIPF+ETSAK+ATNVE AFM M+ EIKNRMA+QP  N
Sbjct: 121 NKCDLAENRVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAGEIKNRMASQPATN 180

Query: 181 A-RPPTVNIRGQPVNQKGGCCS 202
           A +P TV +RGQPV Q+  CCS
Sbjct: 181 ASKPATVQMRGQPVAQQSSCCS 202

[Close]

BLAST of Sed0021657 vs. ExPASy TrEMBL
Match: A0A6J1K501 (ras-related protein RABD2c OS=Cucurbita maxima OX=3661 GN=LOC111490809 PE=4 SV=1)

HSP 1 Score: 401.4 bits (1030), Expect = 2.3e-108
Identity = 197/202 (97.52%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQEGKTIKLQ 60
           MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQ+GKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASESVNKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASE+VNKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASENVNKLLVG 120

Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEDAFMAMSAEIKNRMATQPMNN 180
           NKCDLTANKVVSYETAKAFADEIGIPFMETSAK+ATNVE+AFMAM+AEIKNRMATQPMNN
Sbjct: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRMATQPMNN 180

Query: 181 ARPPTVNIRGQPVNQKGGCCSS 203
           ARPPTVNIRGQPVNQKGGCCSS
Sbjct: 181 ARPPTVNIRGQPVNQKGGCCSS 202

[Close]

BLAST of Sed0021657 vs. ExPASy TrEMBL
Match: A0A6J1H3U9 (ras-related protein RABD2c-like OS=Cucurbita moschata OX=3662 GN=LOC111459758 PE=4 SV=1)

HSP 1 Score: 401.4 bits (1030), Expect = 2.3e-108
Identity = 197/202 (97.52%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQEGKTIKLQ 60
           MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQ+GKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASESVNKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASE+VNKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASENVNKLLVG 120

Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEDAFMAMSAEIKNRMATQPMNN 180
           NKCDLTANKVVSYETAKAFADEIGIPFMETSAK+ATNVE+AFMAM+AEIKNRMATQPMNN
Sbjct: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRMATQPMNN 180

Query: 181 ARPPTVNIRGQPVNQKGGCCSS 203
           ARPPTVNIRGQPVNQKGGCCSS
Sbjct: 181 ARPPTVNIRGQPVNQKGGCCSS 202

[Close]

BLAST of Sed0021657 vs. ExPASy TrEMBL
Match: A0A6J1DYV6 (ras-related protein RABD2c OS=Momordica charantia OX=3673 GN=LOC111025883 PE=4 SV=1)

HSP 1 Score: 399.1 bits (1024), Expect = 1.1e-107
Identity = 196/202 (97.03%), Postives = 201/202 (99.50%), Query Frame = 0


Query: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQEGKTIKLQ 60
           MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQ+GKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASESVNKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASE+VNKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASENVNKLLVG 120

Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEDAFMAMSAEIKNRMATQPMNN 180
           NKCDLTANKVVSYETAKAFADEIGIPFMETSAK+ATNVE+AFMAM+AEIKNRMATQPMNN
Sbjct: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRMATQPMNN 180

Query: 181 ARPPTVNIRGQPVNQKGGCCSS 203
           ARPPTVNIRGQPVNQK GCCSS
Sbjct: 181 ARPPTVNIRGQPVNQKAGCCSS 202

[Close]

BLAST of Sed0021657 vs. ExPASy TrEMBL
Match: A0A6J1EV78 (ras-related protein RABD2c OS=Cucurbita moschata OX=3662 GN=LOC111438063 PE=4 SV=1)

HSP 1 Score: 398.3 bits (1022), Expect = 1.9e-107
Identity = 196/202 (97.03%), Postives = 201/202 (99.50%), Query Frame = 0


Query: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQEGKTIKLQ 60
           MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQ+GKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASESVNKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASE+VNKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASENVNKLLVG 120

Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEDAFMAMSAEIKNRMATQPMNN 180
           NKCDLTANKVVSYETAKAFADEIGIPFMETSAK+ATNVE+AFMAM+AEIKNRMATQPMNN
Sbjct: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRMATQPMNN 180

Query: 181 ARPPTVNIRGQPVNQKGGCCSS 203
           ARPPTVNIRGQPVNQK GCCSS
Sbjct: 181 ARPPTVNIRGQPVNQKTGCCSS 202

[Close]

BLAST of Sed0021657 vs. ExPASy TrEMBL
Match: A0A5A7TAX6 (Ras-related protein RABD2c OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G003700 PE=4 SV=1)

HSP 1 Score: 397.5 bits (1020), Expect = 3.3e-107
Identity = 195/202 (96.53%), Postives = 201/202 (99.50%), Query Frame = 0


Query: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQEGKTIKLQ 60
           MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQ+GKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASESVNKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQ+SFNNVKQWLNEIDRYASE+VNKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120

Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEDAFMAMSAEIKNRMATQPMNN 180
           NKCDLTANKVVSYETAKAFADEIGIPFMETSAK+ATNVE+AFMAM+AEIKNRMATQPMNN
Sbjct: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRMATQPMNN 180

Query: 181 ARPPTVNIRGQPVNQKGGCCSS 203
           ARPPTVNIRGQPVNQK GCCSS
Sbjct: 181 ARPPTVNIRGQPVNQKSGCCSS 202

[Close]

BLAST of Sed0021657 vs. TAIR 10
Match: AT4G17530.1 (RAB GTPase homolog 1C )

HSP 1 Score: 367.1 bits (941), Expect = 9.2e-102
Identity = 179/202 (88.61%), Postives = 191/202 (94.55%), Query Frame = 0


Query: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQEGKTIKLQ 60
           MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQ+GKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASESVNKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGIIV YDVTD +SFNNVKQWLNEIDRYASE+VNKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQWLNEIDRYASENVNKLLVG 120

Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEDAFMAMSAEIKNRMATQPMNN 180
           NKCDLT+ KVVS ETAKAFADE+GIPF+ETSAKNATNVE+AFMAM+A IK RMA+QP   
Sbjct: 121 NKCDLTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMASQPAGG 180

Query: 181 ARPPTVNIRGQPVNQKGGCCSS 203
           ++PPTV IRGQPVNQ+ GCCSS
Sbjct: 181 SKPPTVQIRGQPVNQQSGCCSS 202

[Close]

BLAST of Sed0021657 vs. TAIR 10
Match: AT5G47200.1 (RAB GTPase homolog 1A )

HSP 1 Score: 363.6 bits (932), Expect = 1.0e-100
Identity = 179/202 (88.61%), Postives = 190/202 (94.06%), Query Frame = 0


Query: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQEGKTIKLQ 60
           MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQ+GKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASESVNKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGIIV YDVTD +SFNNVKQWLNEIDRYASE+VNKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQWLNEIDRYASENVNKLLVG 120

Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEDAFMAMSAEIKNRMATQPMNN 180
           NK DLT+ KVVS ETAKAFADE+GIPF+ETSAKNATNVE+AFMAM+A IK RMA+QP   
Sbjct: 121 NKNDLTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMASQPAGG 180

Query: 181 ARPPTVNIRGQPVNQKGGCCSS 203
           A+PPTV IRGQPVNQ+ GCCSS
Sbjct: 181 AKPPTVQIRGQPVNQQSGCCSS 202

[Close]

BLAST of Sed0021657 vs. TAIR 10
Match: AT1G02130.1 (RAS 5 )

HSP 1 Score: 359.4 bits (921), Expect = 1.9e-99
Identity = 176/203 (86.70%), Postives = 191/203 (94.09%), Query Frame = 0


Query: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQEGKTIKLQ 60
           MNPEYDYLFKLLLIGDSGVGKSCLLLRF+DDSY++SYISTIGVDFKIRTVEQ+GKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASESVNKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGII+VYDVTD++SFNNVKQWL+EIDRYAS++VNKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVG 120

Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEDAFMAMSAEIKNRMATQPM-N 180
           NK DLT N+ + YETAKAFADEIGIPFMETSAK+ATNVE AFMAMSA IK RMA+QP  N
Sbjct: 121 NKSDLTENRAIPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASIKERMASQPAGN 180

Query: 181 NARPPTVNIRGQPVNQKGGCCSS 203
           NARPPTV IRGQPV QK GCCS+
Sbjct: 181 NARPPTVQIRGQPVAQKNGCCST 203

[Close]

BLAST of Sed0021657 vs. TAIR 10
Match: AT3G11730.1 (Ras-related small GTP-binding family protein )

HSP 1 Score: 302.0 bits (772), Expect = 3.6e-82
Identity = 148/203 (72.91%), Postives = 175/203 (86.21%), Query Frame = 0


Query: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQEGKTIKLQ 60
           M+ EYDYLFKLLLIGDS VGKSCLLLRFADD+Y+DSYISTIGVDFKIRT+EQ+GKTIKLQ
Sbjct: 1   MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDAYIDSYISTIGVDFKIRTIEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASESVNKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGII+VYD T+ +SFNNVKQWL+EIDRYA+ESV KLL+G
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIIVYDCTEMESFNNVKQWLSEIDRYANESVCKLLIG 120

Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEDAFMAMSAEIKNRMATQPMNN 180
           NK D+  +KVVS ET +A ADE+GIPF+ETSAK++ NVE AF+ ++ EIK +M +Q   N
Sbjct: 121 NKNDMVESKVVSTETGRALADELGIPFLETSAKDSINVEQAFLTIAGEIKKKMGSQTNAN 180

Query: 181 --ARPPTVNIRGQPVNQ-KGGCC 201
             + P TV ++GQP+ Q  GGCC
Sbjct: 181 KTSGPGTVQMKGQPIQQNNGGCC 203

[Close]

BLAST of Sed0021657 vs. TAIR 10
Match: AT3G09900.1 (RAB GTPase homolog E1E )

HSP 1 Score: 238.4 bits (607), Expect = 4.9e-63
Identity = 120/207 (57.97%), Postives = 153/207 (73.91%), Query Frame = 0


Query: 4   EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQEGKTIKLQIWD 63
           +YDYL KLLLIGDSGVGKSCLLLRF+DD++  S+I+TIG+DFKIRTVE +GK IKLQIWD
Sbjct: 11  DYDYLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELDGKRIKLQIWD 70

Query: 64  TAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASESVNKLLVGNKC 123
           TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+  I+++AS+SVNK+LVGNK 
Sbjct: 71  TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMKNIEQHASDSVNKILVGNKA 130

Query: 124 DLTANK-VVSYETAKAFADEIGIPFMETSAKNATNVEDAFMAMSAEIKNRMATQPMNNAR 183
           D+  +K  V     +A ADE GI F ETSAK   NVE  F++++ +IK R+ T+    A 
Sbjct: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNQNVEQVFLSIAKDIKQRL-TESDTKAE 190

Query: 184 PPTVNIRGQ--------PVNQKGGCCS 202
           P  + I  Q          N+K  CCS
Sbjct: 191 PQGIKITKQDANKASSSSTNEKSACCS 216

The following BLAST results are available for this feature:

BLAST of Sed0021657 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022958560.1	4.7e-108	97.52	ras-related protein RABD2c-like [Cucurbita moschata] >XP_022995189.1 ras-related...	[more]
XP_023554189.1	1.4e-107	97.52	GTP-binding protein YPTM2 [Cucurbita pepo subsp. pepo]	[more]
XP_022159480.1	2.3e-107	97.03	ras-related protein RABD2c [Momordica charantia]	[more]
XP_022931789.1	4.0e-107	97.03	ras-related protein RABD2c [Cucurbita moschata]	[more]
XP_004148356.1	6.8e-107	96.53	ras-related protein RABD2c [Cucumis sativus] >XP_008465881.1 PREDICTED: ras-rela...	[more]

BLAST of Sed0021657 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SEH3	1.3e-100	88.61	Ras-related protein RABD2c OS=Arabidopsis thaliana OX=3702 GN=RABD2C PE=1 SV=1	[more]
Q9FPJ4	1.4e-99	88.61	Ras-related protein RABD2b OS=Arabidopsis thaliana OX=3702 GN=RABD2B PE=1 SV=1	[more]
Q05737	3.2e-99	89.16	GTP-binding protein YPTM2 OS=Zea mays OX=4577 GN=YPTM2 PE=2 SV=1	[more]
P28188	2.7e-98	86.70	Ras-related protein RABD2a OS=Arabidopsis thaliana OX=3702 GN=RABD2A PE=1 SV=3	[more]
P40392	2.5e-96	86.14	Ras-related protein RIC1 OS=Oryza sativa subsp. japonica OX=39947 GN=RIC1 PE=2 S...	[more]

BLAST of Sed0021657 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K501	2.3e-108	97.52	ras-related protein RABD2c OS=Cucurbita maxima OX=3661 GN=LOC111490809 PE=4 SV=1	[more]
A0A6J1H3U9	2.3e-108	97.52	ras-related protein RABD2c-like OS=Cucurbita moschata OX=3662 GN=LOC111459758 PE...	[more]
A0A6J1DYV6	1.1e-107	97.03	ras-related protein RABD2c OS=Momordica charantia OX=3673 GN=LOC111025883 PE=4 S...	[more]
A0A6J1EV78	1.9e-107	97.03	ras-related protein RABD2c OS=Cucurbita moschata OX=3662 GN=LOC111438063 PE=4 SV...	[more]
A0A5A7TAX6	3.3e-107	96.53	Ras-related protein RABD2c OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]

BLAST of Sed0021657 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G17530.1	9.2e-102	88.61	RAB GTPase homolog 1C	[more]
AT5G47200.1	1.0e-100	88.61	RAB GTPase homolog 1A	[more]
AT1G02130.1	1.9e-99	86.70	RAS 5	[more]
AT3G11730.1	3.6e-82	72.91	Ras-related small GTP-binding family protein	[more]
AT3G09900.1	4.9e-63	57.97	RAB GTPase homolog E1E	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 112..125 score: 53.48 coord: 32..48 score: 34.84 coord: 9..30 score: 56.84 coord: 50..72 score: 56.52 coord: 147..169 score: 44.37
None	No IPR available	SMART	SM00177	arf_sub_2	coord: 1..173 e-value: 0.0035 score: 1.2
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 6..172 e-value: 1.0E-35 score: 134.6
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 9..172 e-value: 5.5E-107 score: 371.4
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 14..173 e-value: 0.0055 score: -5.5
None	No IPR available	PANTHER	PTHR47977	LD21953P-RELATED	coord: 6..171
None	No IPR available	PANTHER	PTHR47977:SF6	RAS-RELATED PROTEIN RABD2A-LIKE	coord: 6..171
None	No IPR available	PROSITE	PS51420	RHO	coord: 2..173 score: 11.040237
None	No IPR available	PROSITE	PS51419	RAB	coord: 4..173 score: 37.894707
None	No IPR available	CDD	cd01869	Rab1_Ypt1	coord: 7..172 e-value: 4.54783E-126 score: 349.32
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 11..171 e-value: 2.2E-14 score: 63.7
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 10..170 e-value: 3.0E-66 score: 222.0
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 1..173 score: 19.960228
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 2..173 e-value: 4.0E-75 score: 253.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 4..171
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 7..164 e-value: 5.9E-34 score: 115.2

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0021657.1	Sed0021657.1	mRNA
Sed0021657.2	Sed0021657.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding