Sed0021649 (gene) Chayote v1

Overview


Name	Sed0021649
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Ribosome biogenesis protein WDR12 homolog
Location	LG10: 36100219 .. 36107014 (+)
RNA-Seq Expression	Sed0021649
Synteny	Sed0021649

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGAAAAGAAAAAAAACGAAAGTTTTGTTTTTTTTAAAGGAAATAAAAACCTAAACCCTAACCCCCATATTTTTTTCTCTTTGTCCGTCGTCTCTAAACCCTCAGCCGCATAACACAGGCACCACCACCATCTCCTTCTCTGACCAGCACCGACGCCGGCGACTCCGCACACGGCGGAGCCCCACGCGAACTCCCACTTCTTCCGGCGACATTCTGCTTCAGCAACGGCGGATGCGTGTGACTGAACCTCGCTAGCTCTTTTCGCGCCTACTCTTCTTAACGACGCGGCAGTTCAAAGCTCAGGCACCGTTTTCCGGCGACATCGCGATTGTCGGCTGTGGCTTTCATTCTGGGTCAGAACTGAGCGACAGTGACCTTATCAAATTGATAAAGCTCATTCTCACACCCAATCCAATCTGACTGCGAATCTGCAAGATTGAACAAGTTCAAGCATCGTCCAGAAAGGAATTATCAGTCCCGTTGGTGAGTTTAAACCTGTCCAAAGTGTTTTCTAATTCGATTAACCATCGTAGATTGAGTTCTAATTGTTAGAATCTTAGAATCTTTTGGGCTGTTGTGGATGGATTAAATTAAGGCTTAAATGTAACTTTGATGTAATTTTTTTTTTTTTTTGTAGAAATTCTAGCTGACAATATTTAGGTAAGTTTTGATCTTTTGAAGCTAAAATTCGAAGTTAGTAAAATACAATTATTCAACTTGAAATTTGTTATAGGTTGAGCGAGAAATCTTGAAGTTAGCCATGAGTGACTTTTGTATGCTAGGCAATGCCTAGTCCTCAAAGTTGGGAACTGATTTAAATTAAAGTGTTTAAAGTTTAAACGAGAAGTGATTTTATTTGTATGTTTGCTAAATGTGGTACTCATGATTGTGATTCATGTTGAAAAGTATATGATGATGAATGTGTACAGGATATTTCATGTTCTTTCAAAGAAAAGAAATAGTCGTGATGCTTAATTAAATGTTTATTGTGGGATTTTTTGTTGCATTTTGCTGTTAACTCTTGCTCTCGATCCTTGCAACTCGGGATTTTGCTGGAAAGGTTGCACATTTCAGTTTTTGGATTTTCAATTCGCAGAGGTAGCGATGGATATCGATGGTGGTTCGGAAGAAAATTCTAGGCGAATTCAAGTGCGCTTTGTCACGAAACTTAAGGCTCCTCTTGCAGTTCCAAAGAATGCCATTGCCATTCCCTCCAACCTTACCAGACTGGGTCTTTCCTCTGTTGTTAACAATCTTCTTTTAGCTGGTATGCTATACAATATTTTCTAATTTTTCGTCTGGTTCTTTGCTGTTTGACTTGGATATTCCCACTCTGCTTCGTATTAACTACTTTGGTAAAACTTTTTGATAGGGAACCCTGAGTGGGAAGCAGAACCATTTGATTTCCTAGTTGATGGCGAGTTTGTTAGAATGTCGTTGGAGCAATTCCTTCTTGCTAAGGGCATATCGGCTGTAAGATATTAATTTTTGCTGGTGATTTGTATTTTTTATCATTGTTTAGATCCCAAGTCATATGAAAAGGAACAAAAAAAAGCTTTGAGCCATTAGAATATACAGTTTGTTTACATTGAATATGCTTAATTTAAGATGTAGTCTGATCCAAGTTGGAGATATGAATTTTTTTTACGGGTGATAGCTTTTCTGTTATTATCATTTATTTTTCATATCTAAGTGACCTTCCTGACCTGTTATATGGTGTTATATAATAGGAAAAAATACTGGAAATTGAGTACATTCAGGCTGTTGTCCCACGAAGGGAGGAAGAGCCTTCTGTTCATGATGATTGGGTCAGTGCAGTTGATGGGTCTTCTTCCGGGTAAGCATGTTGATGTAATCTACTTTTATCATACTGTAGATGATCCATGATTCTCATTGTCACTTGCATATCAAACTTTTAAGCTCAGTGACCATGCTGCAATTTATAATTCCTACGAGTTCTATAGATGTAGTGTTCACATCTCTGTTTACTGGTGATGACTGACGTCAATTTTCTACCTCTTCGTTTAGTTTATCTGTGTGTTAAAGATAAAGACTAATACAATGGGGCATTTTTGTTCTAAGCTGGTGTATTTTATCGCTGCGTGTAGCTCAAGATGGTGTAATTTATTGAATGAGGATATTAGGTGCTAGGTTTGTATCTTTTTGCAGCAGTAACGGCTTATATGTACATTCACTAAACTATTCTGTTGTATCATTACAATCGGGATTTGAATTATTTTGTTGATACGTCTTATTAAAAGAAGAAATTTAATTTATATACATATTACATACAATCTAAACTTGTATCCACTCGTTTTTTGTAGGTTCATCCTGACAGGTTGTTATGATGGCTTAGGAAGGTAATCAGTAGTTTTTTATAATTATTTTAGTACTTGAAGAAACCCATGAATTTCTGCCCATGTTACTATTGTTTCATGAACATGGATAGTTGCGTTAACTGAAAACTTCTACCATTGTTCCTTAGGGTTTGGGAGTCTGCAGGATTGTGTACACATATTCTCGAAGGCCATAGTGACGCCATATCTTCTGTCTGTATTTTGAATCCTGAAGGTATTTACTTAAATTATGTGCTGTTACAACATGATCCACAATCCACATTGAACAATGTTTTTCTTGCTTTACTTTTAGCTGATAAGTGTTTTCTATATCAAGCTGTTAGTTGTTTCTTGTACGCACCTGGTGTCAGAATAATATCTGATGATACTACATTGGAAATTTGAGAAATGTGTTGTACATGCTGAATCACTTCGATATGGTTGTATCTTGGTTAAAAGCATTCACCTTTTTTCTTGGATTATAGTTACAGTTACACTATCCTTCTTTTTAATTGGAGAGGTCTTTTGTAAGTTGCCTAGAAGACTTATCTCTTGTAATTTCACCCATCAATAAAATTGTTTGTGATTTTTTTTTTTAATTTAAAAAACGGTGCTTTAACCCAAGTTTTCTTCTCTGAGAAGTGGTTGGAAATCCTTGCTGGATTTCTATTTTCCTGGTCATTCAGTGCTGTTTGCCGTATATCATCGAGATTTTTTCTAACTTAGAAACATTCAATCCTTGGGTTTAAGACCTTGAGGCAATAAACTATCTCTGATTTTCCTGTATAATACTAGCCTTTTCTAATTTATTATGTTTCATTATCTTTCTGAAGTGTTGTTCTTTAATTTAAGTTTGAATTTTCAATGGATATCCCACTTTTCAATTTCTATTCCATTCTCTAGTCTAGTCTCTATGGTTTATTAATTCTTGACCATGCTAATACAGAAGCAGCTAATGTCACTCTAGCCACTGCTTCAAAGGATCGAACAGTTAGATTGTGGAAGGTAACTTTGAAGAAGTACTGGTTTAAATTTGTACTGATGTCATTGATAACTTAACAACAATCTTTCTTGTTTCCTCTTAAAGTATTCAAAAGACGATAGGGTTAGCAACTCGACCAAGATAAGGCCATTCAAAATCTTGAAAGGACATAGTTTGTCTGTACAAAGTGTTGCATCACAGAAATCTGGAGACCTGGTATGATCTCATTCTTATTTGTTCAAGTAAAAAGTGAAAGTTACAACTCTCTACTCACACGTTTAGCTCATATTATTTTCCTTTTTTTACTGTGTAATTAGATCTGTTCAGGTTCTTGGGATTGCACAATCAAATTATGGCAAACGGATCAAACTCATTCTGAAGGAGATGTTGTCTCCATTAAGAAAAGAAAAAAGAATAACCAGGTTGAAGAATCTCAGTTAGAGGTAAAACGTGTTCTTTTTAGTCTATTGGGTTAAACAATTAGACAACATGTGCTAAGCACTGAGTCTCCAAGGGGTGGCATAGTGGTTGAAGACTTGGGGTTTGAAGGTATGCTCCCTTCAAGGTACCAGGTTCAAAACTCACTTGTGATATTACTCCTTCGATATCTCCCCGTGCTTGGCCTAGGGACGGGCGTAGTTACCCTTGTTTCAAAAAAAACCATGTGCTAAGCACCGGAAAACATGGTAAAGTGAAGCTCCCGTTTCATGAGGATCATGGAGAAGGCATATCAAGTTCAATAAATAATGCCTCAATACTAGACTACTCAGTAAATCTTTAAGTTCCCTTAAATGGTATGGTTATAGTTAAGTCACTTTATGACTCGGATTCTCACTTCTCCCTGTTTTGACTAATTTGAGTAGCTTTTATCGGAGGGCTATCAAAAATTTCTCTCGGTTGTTAATAACCAAATTATATCTTATGCATTGAATGTGATTGTGCTCTATAATAGAGCATGTGTCTTGATTGAATCATGTATAACTAATATATCTAACAGGGGAACTCTGTTGCTACACTTGTTGGCCATACACAATGTGTGTCATCAGTTGTGTGGCCGAAGCATGGAGAAATTTATTCATCATCATGGGACCATTCTGTAAGAAGATGGGATGTCGAGACAGGCAAAGATTTGTTTAATATTGTATGTTTCCCAACTATCCCTCCCTCTATGTTTCTCGTTTTGCATGTGTGAGTGAAGTAAACTTAGTTATGACTTTTTGAAGTTTTTGTTTAAATACATGAGGTGGGCGTTCATAGGAAGATATGCATTCGCCATTGTCATGCAATTTTCTTTAGAAACCAATTTTTATGGGAATGTGGCTTGAAAAGGTTTTTAACTTGAGGGAGGGAGATTAAACCGTCTGTAGAACCGGTTAGTTTGTTGCCAACAAGAGTAATAGCTCAACTGACATAAGTGTGTGCCCATGACCAAAGCAAGAGGTCATGAGTTTGAATTTCACTCTCAATTAATGTCGAACTTAAAAAAATCACCGGTCGGTATGTGTGCTTAAAAAAAGCAAGATCTCATTTTTATCCATTGTTGTTGGGCTGATTGTTTTTGGAATAAGATCCTTGAAAGGTTTGGCTGGAGTTTTGTGCGCCCCCGTGACATATCGACTTTTCTTCTTTGCATAATGGATGGGCATCCATTTAAGAACTCTACAAAAGTTCTTTGGTTAAACATTGTTTGTGCTTTCTTTTGGAATTGGTGGGGAGAAAGGAACAATAGGATATTCAAAGATACTTTTATTTCCCTAGCCTCTCACTGAAGCCACTATACACAATGGAATTTTTTGGAGTCATAGGCTTCCTCCTTTTTGTAACTATGACCTTTCCTTTTTATATGCTCATTGGCACCATCTTTTGTAAGGTTTTGATTTGCGCTATTGCGTTACTCACTTTATCAATGAAAGTTACTGTTTCCTACCAAAAAAAAGAGAGTTTTTTTTTTTATATATATATGTGAGTCTTTGGGTCAGTTTATGCTGATCTCGACTATTCTCACGGGACATAACGCTTGTACCTACAATATTTGGATGCCAAAGAAACCTGTAGGAAGTTAATTCCTAGGTAGGTGGTCACCGTGGATTGAACTCGTCGTCTATCAGTTACTTAAGATCTACTCCATGATAGTTTACTAGCAGAGCATAGAGCATTTGATTGTAAAGTTCGCTAATTGTGTATCTTATGGGTCCATATTAATTTATCTTAATGAAAGATGAATCTACTCATAAGGAATTTGTCTGCACTGGCAGTTTTGTGGCAAGGCACTCAACTGCCTTGATGTTGGAGGTGAAGGTTCCACTCTCATCGCTGCAGGTGGCTCGGACCCCACCATTAGGATATGGGATCCCCGCAAGCCAGGTATTATGGGAAATGGGAAAGGAGCTGAAAGAGATTTCCCTCTAAAACACTTCAGTTTCTAATATTGTTAATTTTGTGTAGGAACATCTGGTCCTATCTTTCAATTCTTGTCCCACAAATCCTGGGTTTCATCTTGCAAGTGGCACGATAAATCTTGGTTCCATTTGCTGTCTACTTCATATGATGGGAAAGTTATGCTGTGGGATCTAAGAACTGCGGTACTCGAATATTTGCGCTTTCTAGTGTTTGTTCTTTATTAAATGTATCACACCTGTCCCTAATGGGTGGCACAAGTGGTTGAAAGCTTGAGCTTTGAAGGTGTGCTCCCCTTAAGATCTCAAGTTCGAGACTCACCTGTGACATTAATTTATAGACACTTCCTATGTTTGCACTCCTTCAATGCCTCCCAATGCCTGACCTAGGGACGTGCGTGGTTACTTCGGGTATAGTGGAGTGAAACTCCGATTTTCGAGTTTCAAAAAATATATATATATATATATATATATATCACACCTGACTAGAAATTCATTTTGTTCTTCTTACAGTGGCCTTTAGCTGTAATTAGCTCTCACAAAGATAAGGTACCCACTTTGCTCCTTCCTCTGTAATGTAGTCTTTGTCCTTTGCAACTATGTTTCATTGTTTTTTCTACAATGTTGATCTCTTGCAAATTTCAGGTACTATCTGCTGATTGGTGGAAAGGTGACAGTGTTGTAAGTGGCGGGGCGGACTCTAAACTGCGCATTTCGTCGGGAATTTCTGTGCAATAAGGTAGGTAGAAAGCTTTGCTGGCCCAGATAGTCACATATATCGAAAAAAAGCTTTGCTGGTAAAGATTTCACCTAATTGAAAGGATCCTATTCTGCAATCCTCTTTTTTTCAAAGCTCTCTTTTCAGGTCTTTCTTCTCTTCAATGCTAAGTAGAGTTGGGCTTAGTGAAACCTAAGATTGACTTATTATTTATAACTCTGTTTTTAGTTTTATTATCATTATTTAAAACAGTTTTGTCCGTTTTGTTGCATATTGTATGAGAGGATATATATATAAAATCCAACTGATTGTACAAGGGGATGACTAACCTTCATTTTCAATAGTATACTTTTTATTTAAATTA

mRNA sequence

GAGAAAAGAAAAAAAACGAAAGTTTTGTTTTTTTTAAAGGAAATAAAAACCTAAACCCTAACCCCCATATTTTTTTCTCTTTGTCCGTCGTCTCTAAACCCTCAGCCGCATAACACAGGCACCACCACCATCTCCTTCTCTGACCAGCACCGACGCCGGCGACTCCGCACACGGCGGAGCCCCACGCGAACTCCCACTTCTTCCGGCGACATTCTGCTTCAGCAACGGCGGATGCGTGTGACTGAACCTCGCTAGCTCTTTTCGCGCCTACTCTTCTTAACGACGCGGCAGTTCAAAGCTCAGGCACCGTTTTCCGGCGACATCGCGATTGTCGGCTGTGGCTTTCATTCTGGGTCAGAACTGAGCGACAGTGACCTTATCAAATTGATAAAGCTCATTCTCACACCCAATCCAATCTGACTGCGAATCTGCAAGATTGAACAAGTTCAAGCATCGTCCAGAAAGGAATTATCAGTCCCGTTGAGGTAGCGATGGATATCGATGGTGGTTCGGAAGAAAATTCTAGGCGAATTCAAGTGCGCTTTGTCACGAAACTTAAGGCTCCTCTTGCAGTTCCAAAGAATGCCATTGCCATTCCCTCCAACCTTACCAGACTGGGTCTTTCCTCTGTTGTTAACAATCTTCTTTTAGCTGGGAACCCTGAGTGGGAAGCAGAACCATTTGATTTCCTAGTTGATGGCGAGTTTGTTAGAATGTCGTTGGAGCAATTCCTTCTTGCTAAGGGCATATCGGCTGAAAAAATACTGGAAATTGAGTACATTCAGGCTGTTGTCCCACGAAGGGAGGAAGAGCCTTCTGTTCATGATGATTGGGTCAGTGCAGTTGATGGGTCTTCTTCCGGGTTCATCCTGACAGGTTGTTATGATGGCTTAGGAAGGGTTTGGGAGTCTGCAGGATTGTGTACACATATTCTCGAAGGCCATAGTGACGCCATATCTTCTGTCTGTATTTTGAATCCTGAAGAAGCAGCTAATGTCACTCTAGCCACTGCTTCAAAGGATCGAACAGTTAGATTGTGGAAGTATTCAAAAGACGATAGGGTTAGCAACTCGACCAAGATAAGGCCATTCAAAATCTTGAAAGGACATAGTTTGTCTGTACAAAGTGTTGCATCACAGAAATCTGGAGACCTGATCTGTTCAGGTTCTTGGGATTGCACAATCAAATTATGGCAAACGGATCAAACTCATTCTGAAGGAGATGTTGTCTCCATTAAGAAAAGAAAAAAGAATAACCAGGTTGAAGAATCTCAGTTAGAGGGGAACTCTGTTGCTACACTTGTTGGCCATACACAATGTGTGTCATCAGTTGTGTGGCCGAAGCATGGAGAAATTTATTCATCATCATGGGACCATTCTGTAAGAAGATGGGATGTCGAGACAGGCAAAGATTTGTTTAATATTTTTTGTGGCAAGGCACTCAACTGCCTTGATGTTGGAGGTGAAGGTTCCACTCTCATCGCTGCAGGTGGCTCGGACCCCACCATTAGGATATGGGATCCCCGCAAGCCAGGAACATCTGGTCCTATCTTTCAATTCTTGTCCCACAAATCCTGGGTTTCATCTTGCAAGTGGCACGATAAATCTTGGTTCCATTTGCTGTCTACTTCATATGATGGGAAAGTTATGCTGTGGGATCTAAGAACTGCGTGGCCTTTAGCTGTAATTAGCTCTCACAAAGATAAGGTACTATCTGCTGATTGGTGGAAAGGTGACAGTGTTGTAAGTGGCGGGGCGGACTCTAAACTGCGCATTTCGTCGGGAATTTCTGTGCAATAAGGTAGGTAGAAAGCTTTGCTGGCCCAGATAGTCACATATATCGAAAAAAAGCTTTGCTGGTAAAGATTTCACCTAATTGAAAGGATCCTATTCTGCAATCCTCTTTTTTTCAAAGCTCTCTTTTCAGGTCTTTCTTCTCTTCAATGCTAAGTAGAGTTGGGCTTAGTGAAACCTAAGATTGACTTATTATTTATAACTCTGTTTTTAGTTTTATTATCATTATTTAAAACAGTTTTGTCCGTTTTGTTGCATATTGTATGAGAGGATATATATATAAAATCCAACTGATTGTACAAGGGGATGACTAACCTTCATTTTCAATAGTATACTTTTTATTTAAATTA

Coding sequence (CDS)

ATGGATATCGATGGTGGTTCGGAAGAAAATTCTAGGCGAATTCAAGTGCGCTTTGTCACGAAACTTAAGGCTCCTCTTGCAGTTCCAAAGAATGCCATTGCCATTCCCTCCAACCTTACCAGACTGGGTCTTTCCTCTGTTGTTAACAATCTTCTTTTAGCTGGGAACCCTGAGTGGGAAGCAGAACCATTTGATTTCCTAGTTGATGGCGAGTTTGTTAGAATGTCGTTGGAGCAATTCCTTCTTGCTAAGGGCATATCGGCTGAAAAAATACTGGAAATTGAGTACATTCAGGCTGTTGTCCCACGAAGGGAGGAAGAGCCTTCTGTTCATGATGATTGGGTCAGTGCAGTTGATGGGTCTTCTTCCGGGTTCATCCTGACAGGTTGTTATGATGGCTTAGGAAGGGTTTGGGAGTCTGCAGGATTGTGTACACATATTCTCGAAGGCCATAGTGACGCCATATCTTCTGTCTGTATTTTGAATCCTGAAGAAGCAGCTAATGTCACTCTAGCCACTGCTTCAAAGGATCGAACAGTTAGATTGTGGAAGTATTCAAAAGACGATAGGGTTAGCAACTCGACCAAGATAAGGCCATTCAAAATCTTGAAAGGACATAGTTTGTCTGTACAAAGTGTTGCATCACAGAAATCTGGAGACCTGATCTGTTCAGGTTCTTGGGATTGCACAATCAAATTATGGCAAACGGATCAAACTCATTCTGAAGGAGATGTTGTCTCCATTAAGAAAAGAAAAAAGAATAACCAGGTTGAAGAATCTCAGTTAGAGGGGAACTCTGTTGCTACACTTGTTGGCCATACACAATGTGTGTCATCAGTTGTGTGGCCGAAGCATGGAGAAATTTATTCATCATCATGGGACCATTCTGTAAGAAGATGGGATGTCGAGACAGGCAAAGATTTGTTTAATATTTTTTGTGGCAAGGCACTCAACTGCCTTGATGTTGGAGGTGAAGGTTCCACTCTCATCGCTGCAGGTGGCTCGGACCCCACCATTAGGATATGGGATCCCCGCAAGCCAGGAACATCTGGTCCTATCTTTCAATTCTTGTCCCACAAATCCTGGGTTTCATCTTGCAAGTGGCACGATAAATCTTGGTTCCATTTGCTGTCTACTTCATATGATGGGAAAGTTATGCTGTGGGATCTAAGAACTGCGTGGCCTTTAGCTGTAATTAGCTCTCACAAAGATAAGGTACTATCTGCTGATTGGTGGAAAGGTGACAGTGTTGTAAGTGGCGGGGCGGACTCTAAACTGCGCATTTCGTCGGGAATTTCTGTGCAATAA

Protein sequence

MDIDGGSEENSRRIQVRFVTKLKAPLAVPKNAIAIPSNLTRLGLSSVVNNLLLAGNPEWEAEPFDFLVDGEFVRMSLEQFLLAKGISAEKILEIEYIQAVVPRREEEPSVHDDWVSAVDGSSSGFILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCILNPEEAANVTLATASKDRTVRLWKYSKDDRVSNSTKIRPFKILKGHSLSVQSVASQKSGDLICSGSWDCTIKLWQTDQTHSEGDVVSIKKRKKNNQVEESQLEGNSVATLVGHTQCVSSVVWPKHGEIYSSSWDHSVRRWDVETGKDLFNIFCGKALNCLDVGGEGSTLIAAGGSDPTIRIWDPRKPGTSGPIFQFLSHKSWVSSCKWHDKSWFHLLSTSYDGKVMLWDLRTAWPLAVISSHKDKVLSADWWKGDSVVSGGADSKLRISSGISVQ

Homology

[Close]

BLAST of Sed0021649 vs. NCBI nr
Match: XP_023525175.1 (ribosome biogenesis protein WDR12 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 822.4 bits (2123), Expect = 1.8e-234
Identity = 396/434 (91.24%), Postives = 417/434 (96.08%), Query Frame = 0


Query: 1   MDIDGGSEENSRRIQVRFVTKLKAPLAVPKNAIAIPSNLTRLGLSSVVNNLLLAGNPEWE 60
           MDIDGGSE++SRRIQVRF+TKLKAP  VP NAIAIPSNLTRLGLS+VVNNLLLAGNPEWE
Sbjct: 1   MDIDGGSEDSSRRIQVRFITKLKAPCRVPTNAIAIPSNLTRLGLSTVVNNLLLAGNPEWE 60

Query: 61  AEPFDFLVDGEFVRMSLEQFLLAKGISAEKILEIEYIQAVVPRREEEPSVHDDWVSAVDG 120
           AEPFDFL+DGEFVRMSLEQFLLAKGISAEK+LEIEYI+AVVPRREEEPSVHDDWVSAVDG
Sbjct: 61  AEPFDFLIDGEFVRMSLEQFLLAKGISAEKVLEIEYIKAVVPRREEEPSVHDDWVSAVDG 120

Query: 121 SSSGFILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCILNPEEAANVTLATASKDRTV 180
           S SGFILTGCYDGLGRVWESAGLCTHILEGH DAISSVC++NPEEAA+VTLATASKDRT+
Sbjct: 121 SHSGFILTGCYDGLGRVWESAGLCTHILEGHKDAISSVCVVNPEEAASVTLATASKDRTL 180

Query: 181 RLWKYSKDDRVSNSTKIRPFKILKGHSLSVQSVASQKSGDLICSGSWDCTIKLWQTDQTH 240
           RLWKYSKDDR SN TKIRPFKILKGH LSVQSVASQKSGDLICSGSWDCTI LWQTD+TH
Sbjct: 181 RLWKYSKDDRDSNPTKIRPFKILKGHRLSVQSVASQKSGDLICSGSWDCTINLWQTDETH 240

Query: 241 SEGDVVSIKKRKKNNQVEESQLEGNSVATLVGHTQCVSSVVWPKHGEIYSSSWDHSVRRW 300
           SEGD VSIKKR+KN+QVEESQLEGNSVATLVGHTQCVS+VVWP+HGEIYS+SWDHS+RRW
Sbjct: 241 SEGD-VSIKKRRKNDQVEESQLEGNSVATLVGHTQCVSAVVWPQHGEIYSASWDHSIRRW 300

Query: 301 DVETGKDLFNIFCGKALNCLDVGGEGSTLIAAGGSDPTIRIWDPRKPGTSGPIFQFLSHK 360
           DVETGKDLFNIFCGKALNCLDVGGEGSTLIAAGGSDPT+RIWDPRKPGTS PIFQFLSHK
Sbjct: 301 DVETGKDLFNIFCGKALNCLDVGGEGSTLIAAGGSDPTVRIWDPRKPGTSSPIFQFLSHK 360

Query: 361 SWVSSCKWHDKSWFHLLSTSYDGKVMLWDLRTAWPLAVISSHKDKVLSADWWKGDSVVSG 420
           SW+SSCKWHDKS FHLLS SYDGKV LWDLRTAWPLAVI SHKDKVL+ADWWKGDSVVSG
Sbjct: 361 SWISSCKWHDKSSFHLLSASYDGKVRLWDLRTAWPLAVIDSHKDKVLAADWWKGDSVVSG 420

Query: 421 GADSKLRISSGISV 435
           GADSKLRIS GI V
Sbjct: 421 GADSKLRISLGICV 433

[Close]

BLAST of Sed0021649 vs. NCBI nr
Match: XP_023523745.1 (ribosome biogenesis protein WDR12 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 820.1 bits (2117), Expect = 9.2e-234
Identity = 396/434 (91.24%), Postives = 416/434 (95.85%), Query Frame = 0


Query: 1   MDIDGGSEENSRRIQVRFVTKLKAPLAVPKNAIAIPSNLTRLGLSSVVNNLLLAGNPEWE 60
           MDIDG SE++SRRIQVRF+TKLKAP  VP NAIAIPSNLTRLGLS+VVNNLLLAGNPEWE
Sbjct: 1   MDIDGVSEDSSRRIQVRFITKLKAPCRVPTNAIAIPSNLTRLGLSTVVNNLLLAGNPEWE 60

Query: 61  AEPFDFLVDGEFVRMSLEQFLLAKGISAEKILEIEYIQAVVPRREEEPSVHDDWVSAVDG 120
           AEPFDFL+DGEFVRMSLEQFLLAKGISAEK+LEIEYI+AVVPRREEEPSVHDDWVSAVDG
Sbjct: 61  AEPFDFLIDGEFVRMSLEQFLLAKGISAEKVLEIEYIKAVVPRREEEPSVHDDWVSAVDG 120

Query: 121 SSSGFILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCILNPEEAANVTLATASKDRTV 180
           S SGFILTGCYDGLGRVWESAGLCTHILEGH DAISSVC++NPEEAA+VTLATASKDRT+
Sbjct: 121 SHSGFILTGCYDGLGRVWESAGLCTHILEGHKDAISSVCVVNPEEAASVTLATASKDRTL 180

Query: 181 RLWKYSKDDRVSNSTKIRPFKILKGHSLSVQSVASQKSGDLICSGSWDCTIKLWQTDQTH 240
           RLWKYSKDDR SN TKIRPFKILKGH LSVQSVASQKSGDLICSGSWDCTI LWQTD+TH
Sbjct: 181 RLWKYSKDDRDSNPTKIRPFKILKGHRLSVQSVASQKSGDLICSGSWDCTINLWQTDETH 240

Query: 241 SEGDVVSIKKRKKNNQVEESQLEGNSVATLVGHTQCVSSVVWPKHGEIYSSSWDHSVRRW 300
           SEGD VSIKKR+KN+QVEESQLEGNSVATLVGHTQCVS+VVWP+HGEIYS+SWDHS+RRW
Sbjct: 241 SEGD-VSIKKRRKNDQVEESQLEGNSVATLVGHTQCVSAVVWPQHGEIYSASWDHSIRRW 300

Query: 301 DVETGKDLFNIFCGKALNCLDVGGEGSTLIAAGGSDPTIRIWDPRKPGTSGPIFQFLSHK 360
           DVETGKDLFNIFCGKALNCLDVGGEGSTLIAAGGSDPT+RIWDPRKPGTS PIFQFLSHK
Sbjct: 301 DVETGKDLFNIFCGKALNCLDVGGEGSTLIAAGGSDPTVRIWDPRKPGTSSPIFQFLSHK 360

Query: 361 SWVSSCKWHDKSWFHLLSTSYDGKVMLWDLRTAWPLAVISSHKDKVLSADWWKGDSVVSG 420
           SW+SSCKWHDKS FHLLS SYDGKV LWDLRTAWPLAVI SHKDKVLSADWWKGDSVVSG
Sbjct: 361 SWISSCKWHDKSSFHLLSASYDGKVRLWDLRTAWPLAVIDSHKDKVLSADWWKGDSVVSG 420

Query: 421 GADSKLRISSGISV 435
           GADSKLRIS GI V
Sbjct: 421 GADSKLRISLGICV 433

[Close]

BLAST of Sed0021649 vs. NCBI nr
Match: XP_022948382.1 (ribosome biogenesis protein WDR12 homolog [Cucurbita moschata] >KAG7036791.1 Ribosome biogenesis protein WDR12-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 818.9 bits (2114), Expect = 2.0e-233
Identity = 395/434 (91.01%), Postives = 416/434 (95.85%), Query Frame = 0


Query: 1   MDIDGGSEENSRRIQVRFVTKLKAPLAVPKNAIAIPSNLTRLGLSSVVNNLLLAGNPEWE 60
           MDIDG SE++SRRIQVRF+TKLKAP  VP NAIAIPSNLTRLGLS+VVNNLLLAGNPEWE
Sbjct: 1   MDIDGVSEDSSRRIQVRFITKLKAPCRVPTNAIAIPSNLTRLGLSTVVNNLLLAGNPEWE 60

Query: 61  AEPFDFLVDGEFVRMSLEQFLLAKGISAEKILEIEYIQAVVPRREEEPSVHDDWVSAVDG 120
           AEPFDFL+DGEFVRMSLEQFLLAKGISAEK+LEIEYI+AVVPRREEEPSVHDDWVSAVDG
Sbjct: 61  AEPFDFLIDGEFVRMSLEQFLLAKGISAEKVLEIEYIKAVVPRREEEPSVHDDWVSAVDG 120

Query: 121 SSSGFILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCILNPEEAANVTLATASKDRTV 180
           S SGFILTGCYDGLGRVWESAGLCTHILEGH DAISSVC++NPEEAA+VTLATASKDRT+
Sbjct: 121 SHSGFILTGCYDGLGRVWESAGLCTHILEGHKDAISSVCVVNPEEAASVTLATASKDRTL 180

Query: 181 RLWKYSKDDRVSNSTKIRPFKILKGHSLSVQSVASQKSGDLICSGSWDCTIKLWQTDQTH 240
           RLWKYSKDDR SN TKIRPFKILKGH LSVQSVASQKSGDLICSGSWDCTI LWQTD+TH
Sbjct: 181 RLWKYSKDDRDSNPTKIRPFKILKGHRLSVQSVASQKSGDLICSGSWDCTINLWQTDETH 240

Query: 241 SEGDVVSIKKRKKNNQVEESQLEGNSVATLVGHTQCVSSVVWPKHGEIYSSSWDHSVRRW 300
           SEGD VSIKKR+KN+QVEESQLEGNSVATLVGHTQCVS+VVWP+HGEIYS+SWDHS+RRW
Sbjct: 241 SEGD-VSIKKRRKNDQVEESQLEGNSVATLVGHTQCVSAVVWPQHGEIYSASWDHSIRRW 300

Query: 301 DVETGKDLFNIFCGKALNCLDVGGEGSTLIAAGGSDPTIRIWDPRKPGTSGPIFQFLSHK 360
           DVETGKDLFNIFCGKALNCLDVGGEGSTLIAAGGSDPT+RIWDPRKPGTS PIFQFLSHK
Sbjct: 301 DVETGKDLFNIFCGKALNCLDVGGEGSTLIAAGGSDPTVRIWDPRKPGTSSPIFQFLSHK 360

Query: 361 SWVSSCKWHDKSWFHLLSTSYDGKVMLWDLRTAWPLAVISSHKDKVLSADWWKGDSVVSG 420
           SW+SSCKWHDKS FHLLS SYDGKV LWDLRTAWPLAVI SHKDKVL+ADWWKGDSVVSG
Sbjct: 361 SWISSCKWHDKSSFHLLSASYDGKVRLWDLRTAWPLAVIDSHKDKVLAADWWKGDSVVSG 420

Query: 421 GADSKLRISSGISV 435
           GADSKLRIS GI V
Sbjct: 421 GADSKLRISLGICV 433

[Close]

BLAST of Sed0021649 vs. NCBI nr
Match: KAG6607101.1 (Ribosome biogenesis protein WDR12-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 818.9 bits (2114), Expect = 2.0e-233
Identity = 395/434 (91.01%), Postives = 416/434 (95.85%), Query Frame = 0


Query: 1   MDIDGGSEENSRRIQVRFVTKLKAPLAVPKNAIAIPSNLTRLGLSSVVNNLLLAGNPEWE 60
           MDIDG SE++SRRIQVRF+TKLKAP  VP NAIAIPSNLTRLGLS+VVNNLLLAGNPEWE
Sbjct: 1   MDIDGVSEDSSRRIQVRFITKLKAPCRVPTNAIAIPSNLTRLGLSTVVNNLLLAGNPEWE 60

Query: 61  AEPFDFLVDGEFVRMSLEQFLLAKGISAEKILEIEYIQAVVPRREEEPSVHDDWVSAVDG 120
           AEPFDFL+DGEFVRMSLEQFLLAKGISAEK+LEIEYI+AVVPRREEEPSVHDDWVSAVDG
Sbjct: 61  AEPFDFLIDGEFVRMSLEQFLLAKGISAEKVLEIEYIKAVVPRREEEPSVHDDWVSAVDG 120

Query: 121 SSSGFILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCILNPEEAANVTLATASKDRTV 180
           S SGFILTGCYDGLGRVWESAGLCTHILEGH DAISSVC++NPEEAA+VTLATASKDRT+
Sbjct: 121 SHSGFILTGCYDGLGRVWESAGLCTHILEGHKDAISSVCVVNPEEAASVTLATASKDRTL 180

Query: 181 RLWKYSKDDRVSNSTKIRPFKILKGHSLSVQSVASQKSGDLICSGSWDCTIKLWQTDQTH 240
           RLWKYSKDDR SN TKIRPFKILKGH LSVQSVASQKSGDLICSGSWDCTI LWQTD+TH
Sbjct: 181 RLWKYSKDDRDSNPTKIRPFKILKGHRLSVQSVASQKSGDLICSGSWDCTINLWQTDETH 240

Query: 241 SEGDVVSIKKRKKNNQVEESQLEGNSVATLVGHTQCVSSVVWPKHGEIYSSSWDHSVRRW 300
           SEGD VSIKKR+KN+QVEESQLEGNSVATLVGHTQCVS+VVWP+HGEIYS+SWDHS+RRW
Sbjct: 241 SEGD-VSIKKRRKNDQVEESQLEGNSVATLVGHTQCVSAVVWPQHGEIYSASWDHSIRRW 300

Query: 301 DVETGKDLFNIFCGKALNCLDVGGEGSTLIAAGGSDPTIRIWDPRKPGTSGPIFQFLSHK 360
           DVETGKDLFNIFCGKALNCLDVGGEGSTLIAAGGSDPT+RIWDPRKPGTS PIFQFLSHK
Sbjct: 301 DVETGKDLFNIFCGKALNCLDVGGEGSTLIAAGGSDPTVRIWDPRKPGTSSPIFQFLSHK 360

Query: 361 SWVSSCKWHDKSWFHLLSTSYDGKVMLWDLRTAWPLAVISSHKDKVLSADWWKGDSVVSG 420
           SW+SSCKWHDKS FHLLS SYDGKV LWDLRTAWPLAVI SHKDKVL+ADWWKGDSVVSG
Sbjct: 361 SWISSCKWHDKSSFHLLSASYDGKVRLWDLRTAWPLAVIDSHKDKVLAADWWKGDSVVSG 420

Query: 421 GADSKLRISSGISV 435
           GADSKLRIS GI V
Sbjct: 421 GADSKLRISLGICV 433

[Close]

BLAST of Sed0021649 vs. NCBI nr
Match: XP_022997784.1 (ribosome biogenesis protein WDR12 homolog [Cucurbita maxima])

HSP 1 Score: 807.7 bits (2085), Expect = 4.7e-230
Identity = 389/434 (89.63%), Postives = 414/434 (95.39%), Query Frame = 0


Query: 1   MDIDGGSEENSRRIQVRFVTKLKAPLAVPKNAIAIPSNLTRLGLSSVVNNLLLAGNPEWE 60
           MD+DG SE++SRRIQVRF+TKL AP  VP NAIAIPSNLTRLGLS+VVNNLLLAGNPEWE
Sbjct: 1   MDMDGVSEDSSRRIQVRFITKLMAPCRVPTNAIAIPSNLTRLGLSTVVNNLLLAGNPEWE 60

Query: 61  AEPFDFLVDGEFVRMSLEQFLLAKGISAEKILEIEYIQAVVPRREEEPSVHDDWVSAVDG 120
           AEPFDFL+DGEFVRMSLEQFLLAKGISAEK+LEIEYI+AVVPRREEEPSVHDDWVSAVDG
Sbjct: 61  AEPFDFLIDGEFVRMSLEQFLLAKGISAEKVLEIEYIKAVVPRREEEPSVHDDWVSAVDG 120

Query: 121 SSSGFILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCILNPEEAANVTLATASKDRTV 180
           S SGFILTGCYDGLGRVWES+GLCTHILEGH DAISSVC++NPEEAA+VTLATASKD+T+
Sbjct: 121 SHSGFILTGCYDGLGRVWESSGLCTHILEGHKDAISSVCVVNPEEAASVTLATASKDQTL 180

Query: 181 RLWKYSKDDRVSNSTKIRPFKILKGHSLSVQSVASQKSGDLICSGSWDCTIKLWQTDQTH 240
           RLWKYSKDDR SN TKIRPFKILKGH LSVQSVASQKSGDLICSGSWDCTI LWQTD+TH
Sbjct: 181 RLWKYSKDDRDSNPTKIRPFKILKGHRLSVQSVASQKSGDLICSGSWDCTINLWQTDETH 240

Query: 241 SEGDVVSIKKRKKNNQVEESQLEGNSVATLVGHTQCVSSVVWPKHGEIYSSSWDHSVRRW 300
            EG+ VSIKKR+KN+QVEESQLEG+SVATLVGHTQCVS+VVWP+HGEIYS+SWDHS+RRW
Sbjct: 241 FEGN-VSIKKRRKNDQVEESQLEGDSVATLVGHTQCVSAVVWPQHGEIYSASWDHSIRRW 300

Query: 301 DVETGKDLFNIFCGKALNCLDVGGEGSTLIAAGGSDPTIRIWDPRKPGTSGPIFQFLSHK 360
           DVETGKDLFNIFCGKALNCLDVGGEGSTLIAAGGSDPT+RIWDPRKPGTS PIFQFLSHK
Sbjct: 301 DVETGKDLFNIFCGKALNCLDVGGEGSTLIAAGGSDPTVRIWDPRKPGTSSPIFQFLSHK 360

Query: 361 SWVSSCKWHDKSWFHLLSTSYDGKVMLWDLRTAWPLAVISSHKDKVLSADWWKGDSVVSG 420
           SW+SSCKWHDKS FHLLS SYDGKV LWDLRTAWPLAVI SHKDKVLSADWWKGDSVVSG
Sbjct: 361 SWISSCKWHDKSSFHLLSASYDGKVRLWDLRTAWPLAVIDSHKDKVLSADWWKGDSVVSG 420

Query: 421 GADSKLRISSGISV 435
           GADSKLRIS GI V
Sbjct: 421 GADSKLRISLGICV 433

[Close]

BLAST of Sed0021649 vs. ExPASy Swiss-Prot
Match: Q9LF27 (Ribosome biogenesis protein WDR12 homolog OS=Arabidopsis thaliana OX=3702 GN=WDR12 PE=1 SV=1)

HSP 1 Score: 677.9 bits (1748), Expect = 7.4e-194
Identity = 314/434 (72.35%), Postives = 375/434 (86.41%), Query Frame = 0


Query: 1   MDIDGGSEENSRRIQVRFVTKLKAPLAVPKNAIAIPSNLTRLGLSSVVNNLLLAGNPEWE 60
           MDIDG  E+ SRR+ V+FVTKL +P  VP N++AIPSN+TRLGLSS+VN+++ + NPEW+
Sbjct: 1   MDIDG--EDVSRRLHVKFVTKLDSPFKVPVNSVAIPSNVTRLGLSSIVNSIIESENPEWK 60

Query: 61  AEPFDFLVDGEFVRMSLEQFLLAKGISAEKILEIEYIQAVVPRREEEPSVHDDWVSAVDG 120
            EPFDFL+DGE +RMSLE+FLLAKGISAE+ LEIEYI+AV PR+EEEPS+HDDWVSAV+G
Sbjct: 61  TEPFDFLIDGELIRMSLEEFLLAKGISAERTLEIEYIRAVTPRKEEEPSLHDDWVSAVNG 120

Query: 121 SSSGFILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCILNPEEAANVTLATASKDRTV 180
           SS  FILTGCYDGLGRVW SAG C+HILEGHS AISSV ++N  +A  VT+ATASKDRT+
Sbjct: 121 SSPRFILTGCYDGLGRVWSSAGSCSHILEGHSGAISSVALVNSNDAETVTVATASKDRTL 180

Query: 181 RLWKYSKDDRVSNSTKIRPFKILKGHSLSVQSVASQKSGDLICSGSWDCTIKLWQTDQTH 240
           RL+K+   + V ++TK+R +KIL+GH  SVQSV++QKSG+++CS SWDCTI LW T+++ 
Sbjct: 181 RLFKFDPAESVDSTTKVRAYKILRGHKASVQSVSAQKSGNMVCSSSWDCTINLWNTNEST 240

Query: 241 SEGDVVSIKKRKKNNQVEESQLEGNSVATLVGHTQCVSSVVWPKHGEIYSSSWDHSVRRW 300
           SEG+ VS+KKRK NNQ EESQ EG +V +LVGHTQCVSSVVWP+H  IYSSSWDHSVRRW
Sbjct: 241 SEGESVSVKKRKGNNQAEESQSEGEAVTSLVGHTQCVSSVVWPEHDVIYSSSWDHSVRRW 300

Query: 301 DVETGKDLFNIFCGKALNCLDVGGEGSTLIAAGGSDPTIRIWDPRKPGTSGPIFQFLSHK 360
           DVETGKD  N+FCGKALN +DVGGE S LIAAGGSDP +R+WDPRKPGTS P+FQF SH 
Sbjct: 301 DVETGKDSLNLFCGKALNTVDVGGESSALIAAGGSDPILRVWDPRKPGTSAPVFQFSSHS 360

Query: 361 SWVSSCKWHDKSWFHLLSTSYDGKVMLWDLRTAWPLAVISSHKDKVLSADWWKGDSVVSG 420
           SW+S+CKWH  SWFHLLS SYDGK+MLWDLRTAWPL+VI +H DKVLSADWWKG+SVVSG
Sbjct: 361 SWISACKWHKSSWFHLLSASYDGKIMLWDLRTAWPLSVIDTHNDKVLSADWWKGESVVSG 420

Query: 421 GADSKLRISSGISV 435
           GADS LRISSGI++
Sbjct: 421 GADSNLRISSGIAI 432

[Close]

BLAST of Sed0021649 vs. ExPASy Swiss-Prot
Match: Q8H594 (Ribosome biogenesis protein WDR12 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=WDR12 PE=3 SV=1)

HSP 1 Score: 586.3 bits (1510), Expect = 2.9e-166
Identity = 272/434 (62.67%), Postives = 349/434 (80.41%), Query Frame = 0


Query: 5   GGSEENSRRIQVRFVTKLKAPLAVPKNAIAIPSNLTRLGLSSVVNNLLLAGNPEWEAEPF 64
           GG+ + SR+++VRF+TKL APL  P  +IA+P++LTR+GLS +VN+LLLA +P+ +A+PF
Sbjct: 4   GGASDPSRQVRVRFLTKLPAPLRAPPTSIAVPADLTRMGLSEIVNSLLLAASPDHQAQPF 63

Query: 65  DFLVDGEFVRMSLEQFLLAKGISAEKILEIEYIQAVVPRREEEPSVHDDWVSAVDGSSSG 124
           DFLVDGE VR+ L++FLLAKGIS E++LE+EY++AV PR++E+P  HDDWVSAVDGS+  
Sbjct: 64  DFLVDGELVRLPLQEFLLAKGISVERVLELEYVKAVAPRKQEDPCPHDDWVSAVDGSNPS 123

Query: 125 FILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCILNPEEAAN-VTLATASKDRTVRLW 184
           F+LTGCYDGL R+W  A  CTHILEGHSD I+S   +N  E  + + + TASKDR++RL+
Sbjct: 124 FVLTGCYDGLARIWRDASECTHILEGHSDGITSARFINKGETEDRLHVVTASKDRSLRLF 183

Query: 185 KYSKDDRVSNSTKIRPFKILKGHSLSVQSVASQKSGDLICSGSWDCTIKLWQTDQTHSEG 244
           K+  D  VS   +I  +KIL+GH+ SVQSVA   S ++ICSGSWD +IKLW  + +  +G
Sbjct: 184 KF--DTSVSVPKQIGAYKILRGHTSSVQSVAVDPSTNMICSGSWDNSIKLWSVEGSEEDG 243

Query: 245 DVVSIKKRKKNNQ---VEESQLEGNSVATLVGHTQCVSSVVWPKHGEIYSSSWDHSVRRW 304
           D VS+KKR+ N+     EES  EG++ +T +GHTQCVS+V WP+   IYS+SWDHSVR+W
Sbjct: 244 DTVSVKKRRTNSDSSGPEESLFEGSATSTFLGHTQCVSAVTWPERQTIYSASWDHSVRQW 303

Query: 305 DVETGKDLFNIFCGKALNCLDVGGEGSTLIAAGGSDPTIRIWDPRKPGTSGPIFQFLSHK 364
           DV+TGK+ +N+  GKALNCLD GGE S+LIAAGGSDP +R+WDPRKPGT  PIFQF SHK
Sbjct: 304 DVQTGKETWNMVSGKALNCLDCGGESSSLIAAGGSDPVLRVWDPRKPGTLAPIFQFSSHK 363

Query: 365 SWVSSCKWHDKSWFHLLSTSYDGKVMLWDLRTAWPLAVISSHKDKVLSADWWKGDSVVSG 424
           SW+S+CKWH  SWFHL+S+S+DGKVMLWDLRTAWPLA + SHKDKVL ADWWKGDSV+SG
Sbjct: 364 SWISACKWHPSSWFHLVSSSFDGKVMLWDLRTAWPLASVESHKDKVLCADWWKGDSVISG 423

Query: 425 GADSKLRISSGISV 435
           GADSKL I+SGI +
Sbjct: 424 GADSKLCIASGIEI 435

[Close]

BLAST of Sed0021649 vs. ExPASy Swiss-Prot
Match: A8IR43 (Ribosome biogenesis protein WDR12 homolog OS=Chlamydomonas reinhardtii OX=3055 GN=CHLREDRAFT_128420 PE=3 SV=2)

HSP 1 Score: 295.8 bits (756), Expect = 7.9e-79
Identity = 168/437 (38.44%), Postives = 239/437 (54.69%), Query Frame = 0


Query: 13  RIQVRFVTKLKAPLAVPKNAIAIPSNLTRLGLSSVVNNLLLAGNPEWEAEPFDFLVDGEF 72
           ++ V+FVTKL A L VP+  +A+PS+L R GLS ++N+LL    P     PFDFL+DGE 
Sbjct: 6   QVLVKFVTKLPAHLRVPETPVAVPSDLKRYGLSQIINHLLALDPP----RPFDFLIDGEL 65

Query: 73  VRMSLEQFLLAKGISAEKILEIEYIQAVVPRREEEPSVHDDWVSAVD-----------GS 132
           VR SLEQ LLA  +SAE  LE+EY+ AVVP +++  + HDDWVS+VD           GS
Sbjct: 66  VRKSLEQHLLAHNLSAESTLEVEYVPAVVPPQQKNSTPHDDWVSSVDGSRCAPASSSGGS 125

Query: 133 SSGFILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCILNPEEAANVTLATASKDRTVR 192
            SG +++G YDGL R+W         +  H+  ++ V  L P+   ++ L T+ KDR V+
Sbjct: 126 PSGVVVSGSYDGLLRLWNGDLEAVASVSAHAGGVNCVRFL-PKSQGDL-LLTSGKDRLVK 185

Query: 193 LWKYSKDDRVSNSTKIRPFKILKGHSLSVQSVASQKSGDLICSGSWDCTIKLWQTDQ--T 252
           +W+ S  +        R     +GH   V++VA+  SG    S  WD  + +W+  +   
Sbjct: 186 MWQLSSSEEEDAGPSCRLVATYRGHEDGVEAVAASPSGRRFASCGWDGKLLVWEGGEQLR 245

Query: 253 HSEGDVVSIKKRKKNNQVEESQLEGNSVATLVGHTQCVSSVVWPKHGEIYSSSWDHSVRR 312
            + G   + KK++K      S   G   A L GH  CVSSV WP    ++S  WDHSVRR
Sbjct: 246 WAAGTAEASKKKRKTGTANGSAAAGAGGADLRGHLHCVSSVAWPAENSLFSGGWDHSVRR 305

Query: 313 WDVETGKDLFNIFCGKALNCLDVGGEGSTLIAAGGSDPTIRIWDPR-KPGTSG-PIFQFL 372
           WDV +G         KA+ C+        L+A G SD  +R+WD R K G+    +    
Sbjct: 306 WDVSSGAAADTYNGSKAVLCIASHAASPALVAFGCSDRALRLWDTRGKAGSDALAVTTQG 365

Query: 373 SHKSWVSSCKWHDKSWFHLLSTSYDGKVMLWDLRTAWPLAVISSHKDKVLSADWWKG--- 429
           +H  WV++  W   S  H+ S S+DG + +WD+RT  PL ++S H DKVL+  W  G   
Sbjct: 366 AHGGWVTAVAWCPSSQHHIASASHDGTIKMWDIRTQIPLGMLSHHTDKVLALGWLGGAEA 425

[Close]

BLAST of Sed0021649 vs. ExPASy Swiss-Prot
Match: Q6NX08 (Ribosome biogenesis protein wdr12 OS=Danio rerio OX=7955 GN=wdr12 PE=2 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 7.2e-72
Identity = 151/415 (36.39%), Postives = 228/415 (54.94%), Query Frame = 0


Query: 13  RIQVRFVTKLKAPLAVPKNAIAIPSNLTRLGLSSVVNNLLLAGNPEWEAEPFDFLVDGEF 72
           ++Q RF T+ K  L V     +IP++     LS V+N LL A N   +   FDFLV G+F
Sbjct: 3   QLQARFFTENKKYL-VDDVPFSIPASSEVADLSGVINKLLEAKNAGHKHVEFDFLVRGQF 62

Query: 73  VRMSLEQFLLAKGISAEKILEIEYIQAVVPRREEEPSVHDDWVSAVDGSSSGFILTGCYD 132
           +R SL++ +  + IS E+++EIEY++     + EE  +HDDW+S+V+  S  +ILTG YD
Sbjct: 63  LRTSLDKHIETENISTEEVVEIEYVEKFTAPQPEECIMHDDWISSVEADSE-WILTGSYD 122

Query: 133 GLGRVWESAGLCTHILEGHSDAISSVCILNPEEAANVTLATASKDRTVRLWKYSKDDRVS 192
              R+W   G     + GH+D +  V  +   +  N  L TAS D+TV LW+++     S
Sbjct: 123 KTARIWSMEGKAVMTVAGHADVVKDVAWVK-RDGLNSVLLTASLDQTVMLWEWN-----S 182

Query: 193 NSTKIRPFKILKGHSLSVQSVASQKSGDLICSGSWDCTIKLWQTDQTHSEGDVVSIKKRK 252
              K++     +GH+ SV ++A   +    CSGSWD  +K+W    T  E ++    + +
Sbjct: 183 ERNKVKARHCCRGHAGSVDTIAVDPTRTKFCSGSWDKMLKIWSAVPTEEEDEIEEPNRPR 242

Query: 253 KNNQVEESQLEGNSVATLVGHTQCVSSVVWPKHGEIYSSSWDHSVRRWDVETGKDLFNIF 312
           K  + E+  L    + TL GH + VSSV+W    E+ S+SWDH++R WD ETG     + 
Sbjct: 243 KKQKTEQMGLTRTPLMTLSGHNEAVSSVLWMDADELCSASWDHTIRLWDAETGGQKSTLS 302

Query: 313 CGKALNCLDVGGEGSTLIAAGGSDPTIRIWDPRKPGTSGPIFQFLSHKSWVSSCKWHDKS 372
             K  NC+        L A+G +D  +R+WDPR    S  +    SH  WV++ +W    
Sbjct: 303 GSKVFNCISYSPLCRRL-ASGSTDRHVRLWDPRSKDGSLVLLSLTSHNGWVTAVRWAPSH 362

Query: 373 WFHLLSTSYDGKVMLWDLRTA-WPLAVISSHKDKVLSADWWKGDSVVSGGADSKL 427
              L+S S D  V LWD R+   PL  +++H+DKVL ADW +   ++SGGAD+KL
Sbjct: 363 EHQLVSGSLDNVVKLWDTRSCKAPLYDLAAHEDKVLCADWTENGLILSGGADNKL 408

[Close]

BLAST of Sed0021649 vs. ExPASy Swiss-Prot
Match: Q0VC24 (Ribosome biogenesis protein WDR12 OS=Bos taurus OX=9913 GN=WDR12 PE=2 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 1.5e-69
Identity = 149/416 (35.82%), Postives = 231/416 (55.53%), Query Frame = 0


Query: 13  RIQVRFVTKLKAPLAVPKNAIAIPSNLTRLGLSSVVNNLLLAGNPEWEAEPFDFLVDGEF 72
           ++Q RF T  K   AV     +IP+      LS+++N LL A N   +   FDFL+ G+F
Sbjct: 3   QLQTRFFTDNK-KYAVDDVPFSIPAASEIADLSNLINKLLEAKNEFHKHVEFDFLIKGQF 62

Query: 73  VRMSLEQFLLAKGISAEKILEIEYIQAVVPRREEEPSVHDDWVSAVDGSSSGFILTGCYD 132
           +RM L + +  + IS+E+++E+EY++     + E+   HDDW+SA++G+   +ILTG YD
Sbjct: 63  LRMPLFKHMELENISSEEVVELEYVEKYTAPQPEQCMFHDDWISAIEGTEE-WILTGSYD 122

Query: 133 GLGRVWESAGLCTHILEGHSDAISSVCILNPEEAANVTLATASKDRTVRLWKYSKDDRVS 192
              R+W   G     + GH+D +  V  +  +++ +  L +AS D+T+ LW+++ +    
Sbjct: 123 KTSRIWSLEGKSIMTIVGHTDVVKDVAWVK-KDSLSCLLLSASMDQTILLWEWNVE---- 182

Query: 193 NSTKIRPFKILKGHSLSVQSVASQKSGDLICSGSWDCTIKLWQTDQTHSEGDV-VSIKKR 252
              K++     +GH+ SV S+A   +G   CSGSWD  +K+W T  T  E ++  S  + 
Sbjct: 183 -RNKVKALHCCRGHAGSVDSIAVDSTGTKFCSGSWDKMLKIWSTVPTDEEDEMEESTNRP 242

Query: 253 KKNNQVEESQLEGNSVATLVGHTQCVSSVVWPKHGEIYSSSWDHSVRRWDVETGKDLFNI 312
           +K  + E+  L    + TL GH + +SSV+W    EI S+SWDH+++ WDVE+G     +
Sbjct: 243 RKKQKTEQLGLTRTPIVTLSGHKEAISSVLWSDAEEICSASWDHTIKVWDVESGSLKSTL 302

Query: 313 FCGKALNCLDVGGEGSTLIAAGGSDPTIRIWDPRKPGTSGPIFQFLSHKSWVSSCKWHDK 372
              K  NC+        L A+G +D  IR+WDPR    S       SH  WV+S KW   
Sbjct: 303 TGNKVFNCISYSPLCKRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPT 362

Query: 373 SWFHLLSTSYDGKVMLWDLRTA-WPLAVISSHKDKVLSADWWKGDSVVSGGADSKL 427
               L+S S D  V LWD R+   PL  +++H+DKVLS DW     ++SGGAD+KL
Sbjct: 363 HEQQLISGSLDNMVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDSGLLLSGGADNKL 409

[Close]

BLAST of Sed0021649 vs. ExPASy TrEMBL
Match: A0A6J1G934 (Ribosome biogenesis protein WDR12 homolog OS=Cucurbita moschata OX=3662 GN=LOC111452076 PE=3 SV=1)

HSP 1 Score: 818.9 bits (2114), Expect = 9.9e-234
Identity = 395/434 (91.01%), Postives = 416/434 (95.85%), Query Frame = 0


Query: 1   MDIDGGSEENSRRIQVRFVTKLKAPLAVPKNAIAIPSNLTRLGLSSVVNNLLLAGNPEWE 60
           MDIDG SE++SRRIQVRF+TKLKAP  VP NAIAIPSNLTRLGLS+VVNNLLLAGNPEWE
Sbjct: 1   MDIDGVSEDSSRRIQVRFITKLKAPCRVPTNAIAIPSNLTRLGLSTVVNNLLLAGNPEWE 60

Query: 61  AEPFDFLVDGEFVRMSLEQFLLAKGISAEKILEIEYIQAVVPRREEEPSVHDDWVSAVDG 120
           AEPFDFL+DGEFVRMSLEQFLLAKGISAEK+LEIEYI+AVVPRREEEPSVHDDWVSAVDG
Sbjct: 61  AEPFDFLIDGEFVRMSLEQFLLAKGISAEKVLEIEYIKAVVPRREEEPSVHDDWVSAVDG 120

Query: 121 SSSGFILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCILNPEEAANVTLATASKDRTV 180
           S SGFILTGCYDGLGRVWESAGLCTHILEGH DAISSVC++NPEEAA+VTLATASKDRT+
Sbjct: 121 SHSGFILTGCYDGLGRVWESAGLCTHILEGHKDAISSVCVVNPEEAASVTLATASKDRTL 180

Query: 181 RLWKYSKDDRVSNSTKIRPFKILKGHSLSVQSVASQKSGDLICSGSWDCTIKLWQTDQTH 240
           RLWKYSKDDR SN TKIRPFKILKGH LSVQSVASQKSGDLICSGSWDCTI LWQTD+TH
Sbjct: 181 RLWKYSKDDRDSNPTKIRPFKILKGHRLSVQSVASQKSGDLICSGSWDCTINLWQTDETH 240

Query: 241 SEGDVVSIKKRKKNNQVEESQLEGNSVATLVGHTQCVSSVVWPKHGEIYSSSWDHSVRRW 300
           SEGD VSIKKR+KN+QVEESQLEGNSVATLVGHTQCVS+VVWP+HGEIYS+SWDHS+RRW
Sbjct: 241 SEGD-VSIKKRRKNDQVEESQLEGNSVATLVGHTQCVSAVVWPQHGEIYSASWDHSIRRW 300

Query: 301 DVETGKDLFNIFCGKALNCLDVGGEGSTLIAAGGSDPTIRIWDPRKPGTSGPIFQFLSHK 360
           DVETGKDLFNIFCGKALNCLDVGGEGSTLIAAGGSDPT+RIWDPRKPGTS PIFQFLSHK
Sbjct: 301 DVETGKDLFNIFCGKALNCLDVGGEGSTLIAAGGSDPTVRIWDPRKPGTSSPIFQFLSHK 360

Query: 361 SWVSSCKWHDKSWFHLLSTSYDGKVMLWDLRTAWPLAVISSHKDKVLSADWWKGDSVVSG 420
           SW+SSCKWHDKS FHLLS SYDGKV LWDLRTAWPLAVI SHKDKVL+ADWWKGDSVVSG
Sbjct: 361 SWISSCKWHDKSSFHLLSASYDGKVRLWDLRTAWPLAVIDSHKDKVLAADWWKGDSVVSG 420

Query: 421 GADSKLRISSGISV 435
           GADSKLRIS GI V
Sbjct: 421 GADSKLRISLGICV 433

[Close]

BLAST of Sed0021649 vs. ExPASy TrEMBL
Match: A0A6J1KCJ3 (Ribosome biogenesis protein WDR12 homolog OS=Cucurbita maxima OX=3661 GN=LOC111492637 PE=3 SV=1)

HSP 1 Score: 807.7 bits (2085), Expect = 2.3e-230
Identity = 389/434 (89.63%), Postives = 414/434 (95.39%), Query Frame = 0


Query: 1   MDIDGGSEENSRRIQVRFVTKLKAPLAVPKNAIAIPSNLTRLGLSSVVNNLLLAGNPEWE 60
           MD+DG SE++SRRIQVRF+TKL AP  VP NAIAIPSNLTRLGLS+VVNNLLLAGNPEWE
Sbjct: 1   MDMDGVSEDSSRRIQVRFITKLMAPCRVPTNAIAIPSNLTRLGLSTVVNNLLLAGNPEWE 60

Query: 61  AEPFDFLVDGEFVRMSLEQFLLAKGISAEKILEIEYIQAVVPRREEEPSVHDDWVSAVDG 120
           AEPFDFL+DGEFVRMSLEQFLLAKGISAEK+LEIEYI+AVVPRREEEPSVHDDWVSAVDG
Sbjct: 61  AEPFDFLIDGEFVRMSLEQFLLAKGISAEKVLEIEYIKAVVPRREEEPSVHDDWVSAVDG 120

Query: 121 SSSGFILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCILNPEEAANVTLATASKDRTV 180
           S SGFILTGCYDGLGRVWES+GLCTHILEGH DAISSVC++NPEEAA+VTLATASKD+T+
Sbjct: 121 SHSGFILTGCYDGLGRVWESSGLCTHILEGHKDAISSVCVVNPEEAASVTLATASKDQTL 180

Query: 181 RLWKYSKDDRVSNSTKIRPFKILKGHSLSVQSVASQKSGDLICSGSWDCTIKLWQTDQTH 240
           RLWKYSKDDR SN TKIRPFKILKGH LSVQSVASQKSGDLICSGSWDCTI LWQTD+TH
Sbjct: 181 RLWKYSKDDRDSNPTKIRPFKILKGHRLSVQSVASQKSGDLICSGSWDCTINLWQTDETH 240

Query: 241 SEGDVVSIKKRKKNNQVEESQLEGNSVATLVGHTQCVSSVVWPKHGEIYSSSWDHSVRRW 300
            EG+ VSIKKR+KN+QVEESQLEG+SVATLVGHTQCVS+VVWP+HGEIYS+SWDHS+RRW
Sbjct: 241 FEGN-VSIKKRRKNDQVEESQLEGDSVATLVGHTQCVSAVVWPQHGEIYSASWDHSIRRW 300

Query: 301 DVETGKDLFNIFCGKALNCLDVGGEGSTLIAAGGSDPTIRIWDPRKPGTSGPIFQFLSHK 360
           DVETGKDLFNIFCGKALNCLDVGGEGSTLIAAGGSDPT+RIWDPRKPGTS PIFQFLSHK
Sbjct: 301 DVETGKDLFNIFCGKALNCLDVGGEGSTLIAAGGSDPTVRIWDPRKPGTSSPIFQFLSHK 360

Query: 361 SWVSSCKWHDKSWFHLLSTSYDGKVMLWDLRTAWPLAVISSHKDKVLSADWWKGDSVVSG 420
           SW+SSCKWHDKS FHLLS SYDGKV LWDLRTAWPLAVI SHKDKVLSADWWKGDSVVSG
Sbjct: 361 SWISSCKWHDKSSFHLLSASYDGKVRLWDLRTAWPLAVIDSHKDKVLSADWWKGDSVVSG 420

Query: 421 GADSKLRISSGISV 435
           GADSKLRIS GI V
Sbjct: 421 GADSKLRISLGICV 433

[Close]

BLAST of Sed0021649 vs. ExPASy TrEMBL
Match: A0A6J1DM12 (Ribosome biogenesis protein WDR12 homolog OS=Momordica charantia OX=3673 GN=LOC111022210 PE=3 SV=1)

HSP 1 Score: 798.9 bits (2062), Expect = 1.1e-227
Identity = 381/434 (87.79%), Postives = 404/434 (93.09%), Query Frame = 0


Query: 1   MDIDGGSEENSRRIQVRFVTKLKAPLAVPKNAIAIPSNLTRLGLSSVVNNLLLAGNPEWE 60
           MDIDG SE+ SRR+QVRF+TKLKAP  VP NAIAIPSNLTRLGLS+VVNNL+LAGNPEWE
Sbjct: 1   MDIDGVSEDTSRRVQVRFITKLKAPFKVPTNAIAIPSNLTRLGLSTVVNNLILAGNPEWE 60

Query: 61  AEPFDFLVDGEFVRMSLEQFLLAKGISAEKILEIEYIQAVVPRREEEPSVHDDWVSAVDG 120
           AEPFDFL+DGE VRMSLEQFLLAKGISAEK LEIEYI+AV PR+EEEPSVHDDWVSAVDG
Sbjct: 61  AEPFDFLIDGELVRMSLEQFLLAKGISAEKTLEIEYIKAVAPRKEEEPSVHDDWVSAVDG 120

Query: 121 SSSGFILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCILNPEEAANVTLATASKDRTV 180
           S  GFILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCI+NPEEAA+VTLATASKDRT+
Sbjct: 121 SCPGFILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCIVNPEEAASVTLATASKDRTL 180

Query: 181 RLWKYSKDDRVSNSTKIRPFKILKGHSLSVQSVASQKSGDLICSGSWDCTIKLWQTDQTH 240
           RLWKYSKD   SN TKIR FKILKGH LSVQSVASQ SGDLICSGSWDCTI LWQTD+  
Sbjct: 181 RLWKYSKDKSASNPTKIRAFKILKGHGLSVQSVASQTSGDLICSGSWDCTINLWQTDEPQ 240

Query: 241 SEGDVVSIKKRKKNNQVEESQLEGNSVATLVGHTQCVSSVVWPKHGEIYSSSWDHSVRRW 300
           SEGDVVSIK+RKKN+Q EESQLEG SVATLVGHTQCVSSV WPKHGEIYS+SWDHSVRRW
Sbjct: 241 SEGDVVSIKRRKKNDQAEESQLEGTSVATLVGHTQCVSSVAWPKHGEIYSASWDHSVRRW 300

Query: 301 DVETGKDLFNIFCGKALNCLDVGGEGSTLIAAGGSDPTIRIWDPRKPGTSGPIFQFLSHK 360
           DVETGKDLFNIFCGKAL+CLD+GGEGSTLIAAGGSDPTIRIWDPRKPGTSGP+FQFLSH 
Sbjct: 301 DVETGKDLFNIFCGKALSCLDIGGEGSTLIAAGGSDPTIRIWDPRKPGTSGPVFQFLSHS 360

Query: 361 SWVSSCKWHDKSWFHLLSTSYDGKVMLWDLRTAWPLAVISSHKDKVLSADWWKGDSVVSG 420
           SWVS+CKWHD+SWFHLLS SYDGK MLWDLRTAWPLAVI SHKDKVLSADWWKGD+V+SG
Sbjct: 361 SWVSACKWHDRSWFHLLSASYDGKAMLWDLRTAWPLAVIDSHKDKVLSADWWKGDNVISG 420

Query: 421 GADSKLRISSGISV 435
           G DS+L ISSGI V
Sbjct: 421 GVDSRLCISSGIYV 434

[Close]

BLAST of Sed0021649 vs. ExPASy TrEMBL
Match: A0A1S3B4A1 (Ribosome biogenesis protein WDR12 homolog OS=Cucumis melo OX=3656 GN=LOC103486017 PE=3 SV=1)

HSP 1 Score: 757.7 bits (1955), Expect = 2.7e-215
Identity = 371/434 (85.48%), Postives = 390/434 (89.86%), Query Frame = 0


Query: 1   MDIDGGSEENSRRIQVRFVTKLKAPLAVPKNAIAIPSNLTRLGLSSVVNNLLLAGNPEWE 60
           MDIDG  E+ SRRIQVRF+TKLKAP  VP NAIAIPSNLTRLGLS+VVNNLL AGNPEWE
Sbjct: 1   MDIDGDFEDTSRRIQVRFITKLKAPFKVPANAIAIPSNLTRLGLSTVVNNLLSAGNPEWE 60

Query: 61  AEPFDFLVDGEFVRMSLEQFLLAKGISAEKILEIEYIQAVVPRREEEPSVHDDWVSAVDG 120
            EPFDFL+DGE VRMSLE+FLLAKGISAEK LEIEY +AV PRREEEPSVHDDWVSAVDG
Sbjct: 61  EEPFDFLIDGELVRMSLEKFLLAKGISAEKTLEIEYFKAVAPRREEEPSVHDDWVSAVDG 120

Query: 121 SSSGFILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCILNPEEAANVTLATASKDRTV 180
           S  GFILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCI+NP EA NVTLATASKDRT+
Sbjct: 121 SCPGFILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCIVNPGEATNVTLATASKDRTL 180

Query: 181 RLWKYSKDDRVSNSTKIRPFKILKGHSLSVQSVASQKSGDLICSGSWDCTIKLWQTDQTH 240
           RLWKYSKDDRV N TK+RPFKILKGH LSVQSVASQKSG LICSGSWD TIKLW+TD+  
Sbjct: 181 RLWKYSKDDRVKNPTKLRPFKILKGHRLSVQSVASQKSGHLICSGSWDHTIKLWRTDEHQ 240

Query: 241 SEGDVVSIKKRKKNNQVEESQLEGNSVATLVGHTQCVSSVVWPKHGEIYSSSWDHSVRRW 300
           SEGD VSIKKRK NN+ EESQLE +SVATL GH+Q VSSV WPKH EIYS SWDHSVR+W
Sbjct: 241 SEGD-VSIKKRKMNNKAEESQLEEDSVATLDGHSQSVSSVAWPKHEEIYSVSWDHSVRKW 300

Query: 301 DVETGKDLFNIFCGKALNCLDVGGEGSTLIAAGGSDPTIRIWDPRKPGTSGPIFQFLSHK 360
           DVETG  LFN  CGKALNCLD+GGEGS+LIAAGGSDPTIRIWDPRKPGTS PIFQF SH 
Sbjct: 301 DVETGNVLFNHVCGKALNCLDIGGEGSSLIAAGGSDPTIRIWDPRKPGTSSPIFQFSSHT 360

Query: 361 SWVSSCKWHDKSWFHLLSTSYDGKVMLWDLRTAWPLAVISSHKDKVLSADWWKGDSVVSG 420
           SWVS+CKWH+KSWFHLLS SYDGKVMLWDLRTAWPLAVI SHKDKVLSADWWK DSVVSG
Sbjct: 361 SWVSACKWHEKSWFHLLSASYDGKVMLWDLRTAWPLAVIDSHKDKVLSADWWKDDSVVSG 420

Query: 421 GADSKLRISSGISV 435
           GADSKL ISSGI V
Sbjct: 421 GADSKLHISSGIYV 433

[Close]

BLAST of Sed0021649 vs. ExPASy TrEMBL
Match: A0A5D3C4N3 (Ribosome biogenesis protein WDR12 homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold83G00050 PE=3 SV=1)

HSP 1 Score: 757.7 bits (1955), Expect = 2.7e-215
Identity = 371/434 (85.48%), Postives = 390/434 (89.86%), Query Frame = 0


Query: 1   MDIDGGSEENSRRIQVRFVTKLKAPLAVPKNAIAIPSNLTRLGLSSVVNNLLLAGNPEWE 60
           MDIDG  E+ SRRIQVRF+TKLKAP  VP NAIAIPSNLTRLGLS+VVNNLL AGNPEWE
Sbjct: 1   MDIDGDFEDTSRRIQVRFITKLKAPFKVPANAIAIPSNLTRLGLSTVVNNLLSAGNPEWE 60

Query: 61  AEPFDFLVDGEFVRMSLEQFLLAKGISAEKILEIEYIQAVVPRREEEPSVHDDWVSAVDG 120
            EPFDFL+DGE VRMSLE+FLLAKGISAEK LEIEY +AV PRREEEPSVHDDWVSAVDG
Sbjct: 61  EEPFDFLIDGELVRMSLEKFLLAKGISAEKTLEIEYFKAVAPRREEEPSVHDDWVSAVDG 120

Query: 121 SSSGFILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCILNPEEAANVTLATASKDRTV 180
           S  GFILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCI+NP EA NVTLATASKDRT+
Sbjct: 121 SCPGFILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCIVNPGEATNVTLATASKDRTL 180

Query: 181 RLWKYSKDDRVSNSTKIRPFKILKGHSLSVQSVASQKSGDLICSGSWDCTIKLWQTDQTH 240
           RLWKYSKDDRV N TK+RPFKILKGH LSVQSVASQKSG LICSGSWD TIKLW+TD+  
Sbjct: 181 RLWKYSKDDRVKNPTKLRPFKILKGHRLSVQSVASQKSGHLICSGSWDHTIKLWRTDEHQ 240

Query: 241 SEGDVVSIKKRKKNNQVEESQLEGNSVATLVGHTQCVSSVVWPKHGEIYSSSWDHSVRRW 300
           SEGD VSIKKRK NN+ EESQLE +SVATL GH+Q VSSV WPKH EIYS SWDHSVR+W
Sbjct: 241 SEGD-VSIKKRKMNNKAEESQLEEDSVATLDGHSQSVSSVAWPKHEEIYSVSWDHSVRKW 300

Query: 301 DVETGKDLFNIFCGKALNCLDVGGEGSTLIAAGGSDPTIRIWDPRKPGTSGPIFQFLSHK 360
           DVETG  LFN  CGKALNCLD+GGEGS+LIAAGGSDPTIRIWDPRKPGTS PIFQF SH 
Sbjct: 301 DVETGNVLFNHVCGKALNCLDIGGEGSSLIAAGGSDPTIRIWDPRKPGTSSPIFQFSSHT 360

Query: 361 SWVSSCKWHDKSWFHLLSTSYDGKVMLWDLRTAWPLAVISSHKDKVLSADWWKGDSVVSG 420
           SWVS+CKWH+KSWFHLLS SYDGKVMLWDLRTAWPLAVI SHKDKVLSADWWK DSVVSG
Sbjct: 361 SWVSACKWHEKSWFHLLSASYDGKVMLWDLRTAWPLAVIDSHKDKVLSADWWKDDSVVSG 420

Query: 421 GADSKLRISSGISV 435
           GADSKL ISSGI V
Sbjct: 421 GADSKLHISSGIYV 433

[Close]

BLAST of Sed0021649 vs. TAIR 10
Match: AT5G15550.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 677.9 bits (1748), Expect = 5.2e-195
Identity = 314/434 (72.35%), Postives = 375/434 (86.41%), Query Frame = 0


Query: 1   MDIDGGSEENSRRIQVRFVTKLKAPLAVPKNAIAIPSNLTRLGLSSVVNNLLLAGNPEWE 60
           MDIDG  E+ SRR+ V+FVTKL +P  VP N++AIPSN+TRLGLSS+VN+++ + NPEW+
Sbjct: 1   MDIDG--EDVSRRLHVKFVTKLDSPFKVPVNSVAIPSNVTRLGLSSIVNSIIESENPEWK 60

Query: 61  AEPFDFLVDGEFVRMSLEQFLLAKGISAEKILEIEYIQAVVPRREEEPSVHDDWVSAVDG 120
            EPFDFL+DGE +RMSLE+FLLAKGISAE+ LEIEYI+AV PR+EEEPS+HDDWVSAV+G
Sbjct: 61  TEPFDFLIDGELIRMSLEEFLLAKGISAERTLEIEYIRAVTPRKEEEPSLHDDWVSAVNG 120

Query: 121 SSSGFILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCILNPEEAANVTLATASKDRTV 180
           SS  FILTGCYDGLGRVW SAG C+HILEGHS AISSV ++N  +A  VT+ATASKDRT+
Sbjct: 121 SSPRFILTGCYDGLGRVWSSAGSCSHILEGHSGAISSVALVNSNDAETVTVATASKDRTL 180

Query: 181 RLWKYSKDDRVSNSTKIRPFKILKGHSLSVQSVASQKSGDLICSGSWDCTIKLWQTDQTH 240
           RL+K+   + V ++TK+R +KIL+GH  SVQSV++QKSG+++CS SWDCTI LW T+++ 
Sbjct: 181 RLFKFDPAESVDSTTKVRAYKILRGHKASVQSVSAQKSGNMVCSSSWDCTINLWNTNEST 240

Query: 241 SEGDVVSIKKRKKNNQVEESQLEGNSVATLVGHTQCVSSVVWPKHGEIYSSSWDHSVRRW 300
           SEG+ VS+KKRK NNQ EESQ EG +V +LVGHTQCVSSVVWP+H  IYSSSWDHSVRRW
Sbjct: 241 SEGESVSVKKRKGNNQAEESQSEGEAVTSLVGHTQCVSSVVWPEHDVIYSSSWDHSVRRW 300

Query: 301 DVETGKDLFNIFCGKALNCLDVGGEGSTLIAAGGSDPTIRIWDPRKPGTSGPIFQFLSHK 360
           DVETGKD  N+FCGKALN +DVGGE S LIAAGGSDP +R+WDPRKPGTS P+FQF SH 
Sbjct: 301 DVETGKDSLNLFCGKALNTVDVGGESSALIAAGGSDPILRVWDPRKPGTSAPVFQFSSHS 360

Query: 361 SWVSSCKWHDKSWFHLLSTSYDGKVMLWDLRTAWPLAVISSHKDKVLSADWWKGDSVVSG 420
           SW+S+CKWH  SWFHLLS SYDGK+MLWDLRTAWPL+VI +H DKVLSADWWKG+SVVSG
Sbjct: 361 SWISACKWHKSSWFHLLSASYDGKIMLWDLRTAWPLSVIDTHNDKVLSADWWKGESVVSG 420

Query: 421 GADSKLRISSGISV 435
           GADS LRISSGI++
Sbjct: 421 GADSNLRISSGIAI 432

[Close]

BLAST of Sed0021649 vs. TAIR 10
Match: AT5G15550.2 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 607.1 bits (1564), Expect = 1.1e-173
Identity = 281/393 (71.50%), Postives = 337/393 (85.75%), Query Frame = 0


Query: 1   MDIDGGSEENSRRIQVRFVTKLKAPLAVPKNAIAIPSNLTRLGLSSVVNNLLLAGNPEWE 60
           MDIDG  E+ SRR+ V+FVTKL +P  VP N++AIPSN+TRLGLSS+VN+++ + NPEW+
Sbjct: 1   MDIDG--EDVSRRLHVKFVTKLDSPFKVPVNSVAIPSNVTRLGLSSIVNSIIESENPEWK 60

Query: 61  AEPFDFLVDGEFVRMSLEQFLLAKGISAEKILEIEYIQAVVPRREEEPSVHDDWVSAVDG 120
            EPFDFL+DGE +RMSLE+FLLAKGISAE+ LEIEYI+AV PR+EEEPS+HDDWVSAV+G
Sbjct: 61  TEPFDFLIDGELIRMSLEEFLLAKGISAERTLEIEYIRAVTPRKEEEPSLHDDWVSAVNG 120

Query: 121 SSSGFILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCILNPEEAANVTLATASKDRTV 180
           SS  FILTGCYDGLGRVW SAG C+HILEGHS AISSV ++N  +A  VT+ATASKDRT+
Sbjct: 121 SSPRFILTGCYDGLGRVWSSAGSCSHILEGHSGAISSVALVNSNDAETVTVATASKDRTL 180

Query: 181 RLWKYSKDDRVSNSTKIRPFKILKGHSLSVQSVASQKSGDLICSGSWDCTIKLWQTDQTH 240
           RL+K+   + V ++TK+R +KIL+GH  SVQSV++QKSG+++CS SWDCTI LW T+++ 
Sbjct: 181 RLFKFDPAESVDSTTKVRAYKILRGHKASVQSVSAQKSGNMVCSSSWDCTINLWNTNEST 240

Query: 241 SEGDVVSIKKRKKNNQVEESQLEGNSVATLVGHTQCVSSVVWPKHGEIYSSSWDHSVRRW 300
           SEG+ VS+KKRK NNQ EESQ EG +V +LVGHTQCVSSVVWP+H  IYSSSWDHSVRRW
Sbjct: 241 SEGESVSVKKRKGNNQAEESQSEGEAVTSLVGHTQCVSSVVWPEHDVIYSSSWDHSVRRW 300

Query: 301 DVETGKDLFNIFCGKALNCLDVGGEGSTLIAAGGSDPTIRIWDPRKPGTSGPIFQFLSHK 360
           DVETGKD  N+FCGKALN +DVGGE S LIAAGGSDP +R+WDPRKPGTS P+FQF SH 
Sbjct: 301 DVETGKDSLNLFCGKALNTVDVGGESSALIAAGGSDPILRVWDPRKPGTSAPVFQFSSHS 360

Query: 361 SWVSSCKWHDKSWFHLLSTSYDGKVMLWDLRTA 394
           SW+S+CKWH  SWFHLLS SYDGK+MLWDLRTA
Sbjct: 361 SWISACKWHKSSWFHLLSASYDGKIMLWDLRTA 391

[Close]

BLAST of Sed0021649 vs. TAIR 10
Match: AT3G18130.1 (receptor for activated C kinase 1C )

HSP 1 Score: 84.0 bits (206), Expect = 3.4e-16
Identity = 77/272 (28.31%), Postives = 130/272 (47.79%), Query Frame = 0


Query: 147 ILEGHSDAISSVCILNPEEAANVTLATASKDRTVRLWKYSKDDRVSNSTKIRPFKILKGH 206
           I+  H+D +++  I  P + +++ + TAS+D+++ LWK +KDD+     + R    L GH
Sbjct: 10  IMRAHTDIVTA--IATPIDNSDI-IVTASRDKSIILWKLTKDDKSYGVAQRR----LTGH 69

Query: 207 SLSVQSVASQKSGDLICSGSWDCTIKLWQ--TDQT------HSEGDVVSIKKRKKNNQVE 266
           S  V+ V     G    SGSWD  ++LW   T +T      H++ DV+S+     N Q+ 
Sbjct: 70  SHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTK-DVLSVAFSTDNRQIV 129

Query: 267 ESQLEGN------------SVATLVGHTQCVSSVVWPKH---GEIYSSSWDHSVRRWDVE 326
            +  +              +++   GH + VS V +  +     I S+SWD +V+ W+++
Sbjct: 130 SASRDRTIKLWNTLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQ 189

Query: 327 TGKDLFNIFCGKA--LNCLDVGGEGSTLIAAGGSDPTIRIWDPRKPGTSGPIFQFLSHKS 386
             K L N   G +  LN + V  +GS L A+GG D  I +WD       G     L   S
Sbjct: 190 NCK-LRNSLVGHSGYLNTVAVSPDGS-LCASGGKDGVILLWDL----AEGKKLYSLEAGS 249

Query: 387 WVSS-CKWHDKSWFHLLSTSYDGKVMLWDLRT 393
            + S C   ++ W   L  + +  + +WDL +
Sbjct: 250 IIHSLCFSPNRYW---LCAATENSIRIWDLES 264

[Close]

BLAST of Sed0021649 vs. TAIR 10
Match: AT1G48630.1 (receptor for activated C kinase 1B )

HSP 1 Score: 80.9 bits (198), Expect = 2.8e-15
Identity = 73/267 (27.34%), Postives = 123/267 (46.07%), Query Frame = 0


Query: 151 HSDAISSVCILNPEEAANVTLATASKDRTVRLWKYSKDDRVSNSTKIRPFKILKGHSLSV 210
           H+D +++  I  P + ++V + T+S+D+++ LWK +K+D+     + R    + GHS  V
Sbjct: 14  HTDMVTA--IATPVDNSDV-IVTSSRDKSIILWKLTKEDKSYGVAQRR----MTGHSHFV 73

Query: 211 QSVASQKSGDLICSGSWDCTIKLWQTDQTHS-------EGDVVSIKKRKKNNQVEESQLE 270
           Q V     G    SGSWD  ++LW      S         DV+S+     N Q+  +  +
Sbjct: 74  QDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRD 133

Query: 271 GN------------SVATLVGHTQCVSSVVWPKH---GEIYSSSWDHSVRRWDVETGKDL 330
                         +++   GH + VS V +  +     I S+SWD +V+ W+++  K L
Sbjct: 134 RTIKLWNTLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCK-L 193

Query: 331 FNIFCGKA--LNCLDVGGEGSTLIAAGGSDPTIRIWDPRKPGTSGPIFQFLSHKSWVSS- 390
            N   G +  LN + V  +GS L A+GG D  I +WD       G     L   S + S 
Sbjct: 194 RNTLAGHSGYLNTVAVSPDGS-LCASGGKDGVILLWDL----AEGKKLYSLEAGSIIHSL 253

Query: 391 CKWHDKSWFHLLSTSYDGKVMLWDLRT 393
           C   ++ W   L  + +  + +WDL +
Sbjct: 254 CFSPNRYW---LCAATENSIRIWDLES 264

[Close]

BLAST of Sed0021649 vs. TAIR 10
Match: AT5G52820.1 (WD-40 repeat family protein / notchless protein, putative )

HSP 1 Score: 78.6 bits (192), Expect = 1.4e-14
Identity = 113/494 (22.87%), Postives = 182/494 (36.84%), Query Frame = 0


Query: 31  NAIAIPSNLTRLGLSSVVNNLLLAGNPEWEAEPFDFLVDGEFVRMSLEQFLLAKGISAEK 90
           +A+ IP     L L+ +VN  L       E  P+ F V  E + + +  +L    +S EK
Sbjct: 26  SAMYIPQKAGPLQLTQLVNRFL----DNEEMLPYSFYVSDEELLVPVGTYLEKNKVSVEK 85

Query: 91  ILEIEYIQAV------VPRREEEPSVHDDWVSAVDGSSSG-FILTGCYDGLGRVWE---S 150
           +L I Y Q        V R  +  + H + V  V  S  G  + +G  D   R+W+    
Sbjct: 86  VLTIVYQQQAVFRIRPVNRCSQTIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTE 145

Query: 151 AGLCT------------------HILEGHSDAISSVCILNPE----EAANVT-------- 210
             L T                  H++ G       +C  NP+    E + +T        
Sbjct: 146 TPLFTCKGHKNWVLTVAWSPDGKHLVSGSKS--GEICCWNPKKGELEGSPLTGHKKWITG 205

Query: 211 --------------LATASKDRTVRLWKYSKDDRVSNSTKIRPFKILKGHSLSVQSVASQ 270
                           T+SKD   R+W         + T  +    L GH+L+V  V   
Sbjct: 206 ISWEPVHLSSPCRRFVTSSKDGDARIW---------DITLKKSIICLSGHTLAVTCVKWG 265

Query: 271 KSGDLICSGSWDCTIKLWQTDQTHSEGDVVSIKKRKKNNQVEESQLEGNSVATLVGHTQC 330
             G +I +GS DCTIK+W+T Q                         G  +  L GH   
Sbjct: 266 GDG-IIYTGSQDCTIKMWETTQ-------------------------GKLIRELKGHGHW 325

Query: 331 VSSVVWPKHGEIYSSSWDHSVRRW----DVETGKDLFNIFCGKALNCLDVGGEGSTL--- 390
           ++S+       + + ++DH+ R++    + +   + +N   G +   L  G +  T+   
Sbjct: 326 INSLALSTEYVLRTGAFDHTGRQYPPNEEKQKALERYNKTKGDSPERLVSGSDDFTMFLW 385

Query: 391 ------------------------------IAAGGSDPTIRIWDPRKPGTSGP-IFQFLS 432
                                         IA+   D ++R+W+    G +G  +  F  
Sbjct: 386 EPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWN----GITGQFVTVFRG 445

The following BLAST results are available for this feature:

BLAST of Sed0021649 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023525175.1	1.8e-234	91.24	ribosome biogenesis protein WDR12 homolog [Cucurbita pepo subsp. pepo]	[more]
XP_023523745.1	9.2e-234	91.24	ribosome biogenesis protein WDR12 homolog [Cucurbita pepo subsp. pepo]	[more]
XP_022948382.1	2.0e-233	91.01	ribosome biogenesis protein WDR12 homolog [Cucurbita moschata] >KAG7036791.1 Rib...	[more]
KAG6607101.1	2.0e-233	91.01	Ribosome biogenesis protein WDR12-like protein, partial [Cucurbita argyrosperma ...	[more]
XP_022997784.1	4.7e-230	89.63	ribosome biogenesis protein WDR12 homolog [Cucurbita maxima]	[more]

BLAST of Sed0021649 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LF27	7.4e-194	72.35	Ribosome biogenesis protein WDR12 homolog OS=Arabidopsis thaliana OX=3702 GN=WDR...	[more]
Q8H594	2.9e-166	62.67	Ribosome biogenesis protein WDR12 homolog OS=Oryza sativa subsp. japonica OX=399...	[more]
A8IR43	7.9e-79	38.44	Ribosome biogenesis protein WDR12 homolog OS=Chlamydomonas reinhardtii OX=3055 G...	[more]
Q6NX08	7.2e-72	36.39	Ribosome biogenesis protein wdr12 OS=Danio rerio OX=7955 GN=wdr12 PE=2 SV=1	[more]
Q0VC24	1.5e-69	35.82	Ribosome biogenesis protein WDR12 OS=Bos taurus OX=9913 GN=WDR12 PE=2 SV=1	[more]

BLAST of Sed0021649 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G934	9.9e-234	91.01	Ribosome biogenesis protein WDR12 homolog OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1KCJ3	2.3e-230	89.63	Ribosome biogenesis protein WDR12 homolog OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1DM12	1.1e-227	87.79	Ribosome biogenesis protein WDR12 homolog OS=Momordica charantia OX=3673 GN=LOC1...	[more]
A0A1S3B4A1	2.7e-215	85.48	Ribosome biogenesis protein WDR12 homolog OS=Cucumis melo OX=3656 GN=LOC10348601...	[more]
A0A5D3C4N3	2.7e-215	85.48	Ribosome biogenesis protein WDR12 homolog OS=Cucumis melo var. makuwa OX=1194695...	[more]

BLAST of Sed0021649 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G15550.1	5.2e-195	72.35	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G15550.2	1.1e-173	71.50	Transducin/WD40 repeat-like superfamily protein	[more]
AT3G18130.1	3.4e-16	28.31	receptor for activated C kinase 1C	[more]
AT1G48630.1	2.8e-15	27.34	receptor for activated C kinase 1B	[more]
AT5G52820.1	1.4e-14	22.87	WD-40 repeat family protein / notchless protein, putative	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020472	G-protein beta WD-40 repeat	PRINTS	PR00320	GPROTEINBRPT	coord: 171..185 score: 36.87 coord: 376..390 score: 37.93 coord: 330..344 score: 34.8
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 141..184 e-value: 4.9E-4 score: 29.4 coord: 263..301 e-value: 4.6E-5 score: 32.8 coord: 392..430 e-value: 0.52 score: 18.8 coord: 304..343 e-value: 0.11 score: 21.6 coord: 196..235 e-value: 1.3E-6 score: 37.9 coord: 101..139 e-value: 0.64 score: 18.2 coord: 349..389 e-value: 1.3E-5 score: 34.7
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 144..184 e-value: 4.8E-5 score: 24.0 coord: 265..301 e-value: 0.0087 score: 16.9 coord: 356..389 e-value: 0.14 score: 13.1 coord: 199..234 e-value: 2.5E-7 score: 31.3 coord: 317..343 e-value: 0.0036 score: 18.1
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 203..235 score: 11.845179
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 329..343 score: 8.603614
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 356..398 score: 9.873505
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 148..193 score: 10.675542
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 270..310 score: 10.441614
IPR012972	NLE	PFAM	PF08154	NLE	coord: 14..81 e-value: 1.5E-19 score: 70.2
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 105..435 e-value: 5.2E-71 score: 241.3
None	No IPR available	PANTHER	PTHR19855:SF11	RIBOSOME BIOGENESIS PROTEIN WDR12	coord: 9..430
None	No IPR available	PANTHER	PTHR19855	WD40 REPEAT PROTEIN 12, 37	coord: 9..430
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 203..235 score: 9.889235
None	No IPR available	CDD	cd00200	WD40	coord: 111..428 e-value: 4.13604E-48 score: 164.43
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 376..390
IPR028599	WD repeat WDR12/Ytm1	HAMAP	MF_03029	WDR12	coord: 8..433 score: 31.056704
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 109..428

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0021649.1	Sed0021649.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000466	maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process	GO:0000463	maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process	GO:0042254	ribosome biogenesis
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0005654	nucleoplasm
cellular_component	GO:0030687	preribosome, large subunit precursor
molecular_function	GO:0005515	protein binding
molecular_function	GO:0043021	ribonucleoprotein complex binding