Sed0021589 (gene) Chayote v1

Overview


Name	Sed0021589
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Unknown protein
Location	Contig00347: 102249 .. 103868 (-)
RNA-Seq Expression	Sed0021589
Synteny	Sed0021589

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAGCTGGCCATGCCCGAAGTCGTTACCTTAACCGCAAGGAGGGGGATGCCGAAGGCAGGGCTAGTGACTGGAGTGAAGTCGTAACAAGGTAGCCGTACTGGAAGGTGCGGCTGGATCACCTCCTTTTCAGGGAGAGCTAATGCTTGTTGGGTATTTTGGTTTGACACTGCTTCACACCCAAAAAGAAGCGAGCTACGTCTGAGTTAAACTTGGAGATGGAAGTCTTCTTTCGTTTCTCGACGGTGAAGTAAGACTAAGCTCATGAGCTTATTATCCTAGGTCGGAACAAGTTGATAGGATCCCCTTTTTTACGTCCCCATGTCCCTCCCGTGTGGCGACATGGGGGCGAAAAAAGGAAAGAGAGGGATGGGGTTTCTCTCGCTTTTGGCATAGCGGGCCCCCAGCGGGAGGCCCGCACGACGGGCTATTAGCTCAGTGGTAGAGCGCGCCCTGATAATTGCGTCGTTGTGCCTGGGCTGTGAGGGCTCTCAGCCACATGGATAGTTCAATGTGCTCATCAGCGCCTGACCCTGAGATGTGGATCATCAAGGCACATTAGCATGGCGTACTTCTCCTGTTCGAACCGGGGTTTGAAACCAAACTTCTGCTCAGGAGGATAGATGGGGCGATTCAGGTGAGATCAATGTAGATCCAACTTTCTATTCACTCGTGGGATCCGGGCGGTCAGGGGACCACCTCGGCTCCTCTCTTCTCGAGAATCCATACATCCCTTATCAGTATATGGACAGCTATCTCTCGAGCACAGGTTTAGGTTCGGCCTCAATGGGAAAATAAAACGGAGCACCTAACAACGTATCTTCACAGACCAAGAACTACGAGATCGCCCCTTTCATTCTGGGGTGACGGAGGGATCATACCATTCGAGCCTTTTTTTTTTTTCATGCTTTTCCCGGAGGATCTGGAAAGCTGCAATCAATAGGATTTTCTTAATCCTCCTTCCCGAAAGCGAAAGGAAGAACTTGAAATTCTTTTCCTTTCTTCCGCAGGGACCAGGAGATTGGATCTAGCCGTAAGAAGAATGTTTGGCTGATAAATAACTCACTTCTTGGTCGTCGACCCCTCAGTCACTACAGACACACCCCGATCAGTGCAATGGGATGTGTCTATTTATCTATCTCTTGACTCAGAAATGGGAGCAGGTTTGAAAAAGGATCTTAGAGTGTCTAGGGTTGGGCCAGGAGGGTTTCTTAACGCCTTCTTTTTCTTCTCATCAGGTTATTTCACAAAGACTTGCCATGGTAAGGAAGAAGGGGAACAAGCACACTTGGAGGCGCAGTACAACGGAGAGTTGTATGCTGCGTTCAGGAAGGATGAATCGCTCCCGAAAGGAATCTATTGATTCTCTCCCAATTGGTTGGACCGTAGGTGCGATGATTTACTTCACGGGCGAGGTCTCTGGTTCAAGTCCAGGATGGCCCAGCTACGCCAAGTAAAAGAATAAAAGAATAGAAGAAGCATCTGACTCCTTCATGCAGGCCCCACTTGGCTCAGGGGATATAGCTCAGTTGGTAGAGCTCCGCTCTTGCAATTGGGTCGTTGCGATTACAGGTTGGATGTCTAATTGTCAGGCAGTAATGATAGTATCTTGTACCTGA

mRNA sequence

ATGGGAGCTGGCCATGCCCGAAGTCGTTACCTTAACCGCAAGGAGGGGGATGCCGAAGGCAGGGCTAGTGACTGGAGTGAAGTCGTAACAAGGGCTCTCAGCCACATGGATAGTTCAATGTGCTCATCAGCGCCTGACCCTGAGATATGGGGCGATTCAGGTGAGATCAATGTAGATCCAACTTTCTATTCACTCGTGGGATCCGGGCGGTCAGGGGACCACCTCGGCTCCTCTCTTCTCGAGAATCCATACATCCCTTATCAGGACCAGGAGATTGGATCTAGCCGTAAGAAGAATGTTTGGCTGATAAATAACTCACTTCTTGGTCGTCGACCCCTCAGTCACTACAGACACACCCCGATCAGTGCAATGGGATGTGCGATGATTTACTTCACGGGCGAGGTCTCTGGTTCAAGTCCAGGATGGCCCAAAGAAGCATCTGACTCCTTCATGCAGGCCCCACTTGGCTCAGGGGATATAGCTCAGTTGGTAGAGCTCCGCTCTTGCAATTGGGTCGTTGCGATTACAGGTTGGATGTCTAATTGTCAGGCAGTAATGATAGTATCTTGTACCTGA

Coding sequence (CDS)

ATGGGAGCTGGCCATGCCCGAAGTCGTTACCTTAACCGCAAGGAGGGGGATGCCGAAGGCAGGGCTAGTGACTGGAGTGAAGTCGTAACAAGGGCTCTCAGCCACATGGATAGTTCAATGTGCTCATCAGCGCCTGACCCTGAGATATGGGGCGATTCAGGTGAGATCAATGTAGATCCAACTTTCTATTCACTCGTGGGATCCGGGCGGTCAGGGGACCACCTCGGCTCCTCTCTTCTCGAGAATCCATACATCCCTTATCAGGACCAGGAGATTGGATCTAGCCGTAAGAAGAATGTTTGGCTGATAAATAACTCACTTCTTGGTCGTCGACCCCTCAGTCACTACAGACACACCCCGATCAGTGCAATGGGATGTGCGATGATTTACTTCACGGGCGAGGTCTCTGGTTCAAGTCCAGGATGGCCCAAAGAAGCATCTGACTCCTTCATGCAGGCCCCACTTGGCTCAGGGGATATAGCTCAGTTGGTAGAGCTCCGCTCTTGCAATTGGGTCGTTGCGATTACAGGTTGGATGTCTAATTGTCAGGCAGTAATGATAGTATCTTGTACCTGA

Protein sequence

MGAGHARSRYLNRKEGDAEGRASDWSEVVTRALSHMDSSMCSSAPDPEIWGDSGEINVDPTFYSLVGSGRSGDHLGSSLLENPYIPYQDQEIGSSRKKNVWLINNSLLGRRPLSHYRHTPISAMGCAMIYFTGEVSGSSPGWPKEASDSFMQAPLGSGDIAQLVELRSCNWVVAITGWMSNCQAVMIVSCT

Homology

[Close]

BLAST of Sed0021589 vs. NCBI nr
Match: PWA37412.1 (ATP synthase subunit beta, chloroplastic [Artemisia annua])

HSP 1 Score: 167.5 bits (423), Expect = 1.1e-37
Identity = 119/250 (47.60%), Postives = 134/250 (53.60%), Query Frame = 0


Query: 1   MGAGHARSRYLNRKEGDAEGRASDWSEVVTR----------------------------- 60
           MGAGHARSRYLNRKEGDAEGRASDWSEVVTR                             
Sbjct: 1   MGAGHARSRYLNRKEGDAEGRASDWSEVVTRSEQVDRIPLFTSPCPLCGDMGAKKGKRGM 60

Query: 61  -ALSHMDSSMCSSAPDPEIWGDSGEI-------------NVDPTFYSLVGSGRS-GDHLG 120
            ALSHMDSSMCSSAPDPE+W   G +             NVD TF SLVGSGRS GDH G
Sbjct: 61  GALSHMDSSMCSSAPDPEMWIIQGTLAWRTPPVRTGVRSNVDLTFDSLVGSGRSGGDHHG 120

Query: 121 SSLLENPYIPYQDQE-----IGSSRKKNVWLINNSLL---------------GRRPL--S 177
           SSLLENPYIPYQ  +      G  + +  W ++  L                G R    +
Sbjct: 121 SSLLENPYIPYQCMDSYLSSTGLEKAEIKWDVSIYLSLDSKWEQTCHGKEEGGNRHTWRA 180

[Close]

BLAST of Sed0021589 vs. NCBI nr
Match: CAA7019109.1 (unnamed protein product [Microthlaspi erraticum] >CAA7022552.1 unnamed protein product [Microthlaspi erraticum] >CAA7035226.1 unnamed protein product [Microthlaspi erraticum] >CAA7038180.1 unnamed protein product [Microthlaspi erraticum] >CAA7038883.1 unnamed protein product [Microthlaspi erraticum])

HSP 1 Score: 151.0 bits (380), Expect = 1.1e-32
Identity = 105/199 (52.76%), Postives = 118/199 (59.30%), Query Frame = 0


Query: 1   MGAGHARSRYLNRKEGDAEGRASDWSEVVTRALSHMDSSMCSSAPDPEIWGDSGEINVDP 60
           MGAGHARSRYLNRKEG AEGRASDWSEVVTR +            D  I   S   NVDP
Sbjct: 1   MGAGHARSRYLNRKEGGAEGRASDWSEVVTRRI------------DGAIQVRS---NVDP 60

Query: 61  TFYSLVGSGRS-GDHLGSSLLENPYIPYQDQE-------IGS-SRKKNVWLINNSLLGRR 120
           TFYSLVGSGRS GDH GSSLLENPYIPYQ  +       +GS S  K+    NN      
Sbjct: 61  TFYSLVGSGRSGGDHQGSSLLENPYIPYQCMDSYLSSAGLGSASMGKSNGAPNNV---SS 120

Query: 121 PLSHYRHTPISAMGC------AMIYFTGEVSGSSPG--WPKEASDSFMQAPLGSGDIAQL 180
              +Y  TP   +GC        ++F   ++    G    K+ + S M   L  GDIAQL
Sbjct: 121 QTKNYEITPF-ILGCDDLLHGRGLWFKSRMAQLRQGKESKKDLTPSCM-LHLARGDIAQL 179

Query: 181 VELRSCNWVVAITGWMSNC 183
           VELRSCNWVVAITGW+SNC
Sbjct: 181 VELRSCNWVVAITGWVSNC 179

[Close]

BLAST of Sed0021589 vs. NCBI nr
Match: CAA7061694.1 (unnamed protein product [Microthlaspi erraticum])

HSP 1 Score: 151.0 bits (380), Expect = 1.1e-32
Identity = 105/199 (52.76%), Postives = 118/199 (59.30%), Query Frame = 0


Query: 1   MGAGHARSRYLNRKEGDAEGRASDWSEVVTRALSHMDSSMCSSAPDPEIWGDSGEINVDP 60
           MGAGHARSRYLNRKEG AEGRASDWSEVVTR +            D  I   S   NVDP
Sbjct: 1   MGAGHARSRYLNRKEGGAEGRASDWSEVVTRRI------------DGAIQVRS---NVDP 60

Query: 61  TFYSLVGSGRS-GDHLGSSLLENPYIPYQDQE-------IGS-SRKKNVWLINNSLLGRR 120
           TFYSLVGSGRS GDH GSSLLENPYIPYQ  +       +GS S  K+    NN      
Sbjct: 61  TFYSLVGSGRSGGDHQGSSLLENPYIPYQCMDSYLSSAGLGSASMGKSNGAPNNV---SS 120

Query: 121 PLSHYRHTPISAMGC------AMIYFTGEVSGSSPG--WPKEASDSFMQAPLGSGDIAQL 180
              +Y  TP   +GC        ++F   ++    G    K+ + S M   L  GDIAQL
Sbjct: 121 QTKNYEITPF-ILGCDDLLHGRGLWFKSRMAQLRQGKESKKDLTPSCM-LHLARGDIAQL 179

Query: 181 VELRSCNWVVAITGWMSNC 183
           VELRSCNWVVAITGW+SNC
Sbjct: 181 VELRSCNWVVAITGWVSNC 179

[Close]

BLAST of Sed0021589 vs. NCBI nr
Match: CAA7050893.1 (unnamed protein product [Microthlaspi erraticum])

HSP 1 Score: 149.4 bits (376), Expect = 3.1e-32
Identity = 104/199 (52.26%), Postives = 117/199 (58.79%), Query Frame = 0


Query: 1   MGAGHARSRYLNRKEGDAEGRASDWSEVVTRALSHMDSSMCSSAPDPEIWGDSGEINVDP 60
           MGAGHARSRYLNRKEG AEGRASDWSEVVTR +            D  I   S   NVDP
Sbjct: 1   MGAGHARSRYLNRKEGGAEGRASDWSEVVTRRI------------DGAIQVRS---NVDP 60

Query: 61  TFYSLVGSGRS-GDHLGSSLLENPYIPYQDQE-------IGS-SRKKNVWLINNSLLGRR 120
           TFYSLVGSGRS GDH GSSLLENPYIPYQ  +       +GS S  K+    NN      
Sbjct: 61  TFYSLVGSGRSGGDHQGSSLLENPYIPYQCMDSYLSSAGLGSASMGKSNGAPNNV---SS 120

Query: 121 PLSHYRHTPISAMGC------AMIYFTGEVSGSSPG--WPKEASDSFMQAPLGSGDIAQL 180
              +Y  TP   +GC        ++F   ++    G    K+ + S M   L  GDIAQL
Sbjct: 121 QTKNYEITPF-ILGCDDLLHGRGLWFKSRMAELRQGKESKKDLTPSCM-LHLARGDIAQL 179

Query: 181 VELRSCNWVVAITGWMSNC 183
           VELRSCNWVV ITGW+SNC
Sbjct: 181 VELRSCNWVVGITGWVSNC 179

[Close]

BLAST of Sed0021589 vs. NCBI nr
Match: PPR83386.1 (hypothetical protein GOBAR_AA37328 [Gossypium barbadense])

HSP 1 Score: 143.3 bits (360), Expect = 2.2e-30
Identity = 103/231 (44.59%), Postives = 116/231 (50.22%), Query Frame = 0


Query: 20  GRASDWSEVVTRALSHMDSSMCSSAPDPEIWGDSGEI-------------NVDPTFYSLV 79
           G AS+    + R   HMDSSMCSSAPDPE+W   G +             NVDPTFYSLV
Sbjct: 176 GIASNRRSAIRR---HMDSSMCSSAPDPEMWIIQGTLAWRTSPVRTGVRSNVDPTFYSLV 235

Query: 80  GSGRS-GDHLGSSLLENPYIPYQ--DQEIGSS-RKKNVWLINNSLLGRRPLSHYRHTPIS 139
           GSGRS GDH GSSLL+NPYIPYQ  D  + S+  KK++ +      G      +   PI 
Sbjct: 236 GSGRSGGDHHGSSLLDNPYIPYQCMDSYLSSTGLKKDLRVFRVGPRGSLNALFF-FLPIG 295

Query: 140 AMGCAMIYFTGEVSGSSPG-----W------------------PK--------------- 191
            +     YFT    G   G     W                  PK               
Sbjct: 296 VIS----YFTNTCHGKEEGGNKHTWRAQYNGELYAAFGKDESLPKRNLLILSQLDGPAAP 355

[Close]

BLAST of Sed0021589 vs. ExPASy Swiss-Prot
Match: Q49KT9 (Uncharacterized protein ycf68 OS=Eucalyptus globulus subsp. globulus OX=71271 GN=ycf68-1 PE=3 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 3.2e-16
Identity = 50/87 (57.47%), Postives = 52/87 (59.77%), Query Frame = 0


Query: 31 RALSHMDSSMCSSAPDPEIWGDSGEI----------------------------NVDPTF 89
          RALSHMDSSMCSSAPDPE+W   G +                            NVDPTF
Sbjct: 9  RALSHMDSSMCSSAPDPEMWIIQGTLAWRTSPVRTGFETKPLLRRIDGAIQVRSNVDPTF 68

[Close]

BLAST of Sed0021589 vs. ExPASy Swiss-Prot
Match: P52807 (Uncharacterized protein ycf68 OS=Pinus thunbergii OX=3350 GN=ycf68 PE=3 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 3.3e-05
Identity = 25/36 (69.44%), Postives = 25/36 (69.44%), Query Frame = 0


Query: 57 NVDPTFYSLVGSGRSG----DHLGSSLLENPYIPYQ 89
          N DPTFYS V  G  G     HLGSSLLENPYIPYQ
Sbjct: 30 NTDPTFYSFVDLGGPGVPVVIHLGSSLLENPYIPYQ 65

[Close]

BLAST of Sed0021589 vs. ExPASy Swiss-Prot
Match: Q85WV9 (Uncharacterized protein ycf68 OS=Pinus koraiensis OX=88728 GN=ycf68 PE=3 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 1.3e-04
Identity = 24/36 (66.67%), Postives = 24/36 (66.67%), Query Frame = 0


Query: 57 NVDPTFYSLVGSGRSGD----HLGSSLLENPYIPYQ 89
          N DPTFYS V  G  G     H GSSLLENPYIPYQ
Sbjct: 30 NADPTFYSFVDLGGPGGPVVIHHGSSLLENPYIPYQ 65

[Close]

BLAST of Sed0021589 vs. ExPASy TrEMBL
Match: A0A2U1KL25 (Uncharacterized protein ycf68 OS=Artemisia annua OX=35608 GN=CTI12_AA568190 PE=3 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 5.3e-38
Identity = 119/250 (47.60%), Postives = 134/250 (53.60%), Query Frame = 0


Query: 1   MGAGHARSRYLNRKEGDAEGRASDWSEVVTR----------------------------- 60
           MGAGHARSRYLNRKEGDAEGRASDWSEVVTR                             
Sbjct: 1   MGAGHARSRYLNRKEGDAEGRASDWSEVVTRSEQVDRIPLFTSPCPLCGDMGAKKGKRGM 60

Query: 61  -ALSHMDSSMCSSAPDPEIWGDSGEI-------------NVDPTFYSLVGSGRS-GDHLG 120
            ALSHMDSSMCSSAPDPE+W   G +             NVD TF SLVGSGRS GDH G
Sbjct: 61  GALSHMDSSMCSSAPDPEMWIIQGTLAWRTPPVRTGVRSNVDLTFDSLVGSGRSGGDHHG 120

Query: 121 SSLLENPYIPYQDQE-----IGSSRKKNVWLINNSLL---------------GRRPL--S 177
           SSLLENPYIPYQ  +      G  + +  W ++  L                G R    +
Sbjct: 121 SSLLENPYIPYQCMDSYLSSTGLEKAEIKWDVSIYLSLDSKWEQTCHGKEEGGNRHTWRA 180

[Close]

BLAST of Sed0021589 vs. ExPASy TrEMBL
Match: A0A6D2KCL7 (Uncharacterized protein ycf68 OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS22461 PE=3 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 5.1e-33
Identity = 105/199 (52.76%), Postives = 118/199 (59.30%), Query Frame = 0


Query: 1   MGAGHARSRYLNRKEGDAEGRASDWSEVVTRALSHMDSSMCSSAPDPEIWGDSGEINVDP 60
           MGAGHARSRYLNRKEG AEGRASDWSEVVTR +            D  I   S   NVDP
Sbjct: 1   MGAGHARSRYLNRKEGGAEGRASDWSEVVTRRI------------DGAIQVRS---NVDP 60

Query: 61  TFYSLVGSGRS-GDHLGSSLLENPYIPYQDQE-------IGS-SRKKNVWLINNSLLGRR 120
           TFYSLVGSGRS GDH GSSLLENPYIPYQ  +       +GS S  K+    NN      
Sbjct: 61  TFYSLVGSGRSGGDHQGSSLLENPYIPYQCMDSYLSSAGLGSASMGKSNGAPNNV---SS 120

Query: 121 PLSHYRHTPISAMGC------AMIYFTGEVSGSSPG--WPKEASDSFMQAPLGSGDIAQL 180
              +Y  TP   +GC        ++F   ++    G    K+ + S M   L  GDIAQL
Sbjct: 121 QTKNYEITPF-ILGCDDLLHGRGLWFKSRMAQLRQGKESKKDLTPSCM-LHLARGDIAQL 179

Query: 181 VELRSCNWVVAITGWMSNC 183
           VELRSCNWVVAITGW+SNC
Sbjct: 181 VELRSCNWVVAITGWVSNC 179

[Close]

BLAST of Sed0021589 vs. ExPASy TrEMBL
Match: A0A6D2LMW7 (Uncharacterized protein ycf68 OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS48930 PE=3 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 5.1e-33
Identity = 105/199 (52.76%), Postives = 118/199 (59.30%), Query Frame = 0


Query: 1   MGAGHARSRYLNRKEGDAEGRASDWSEVVTRALSHMDSSMCSSAPDPEIWGDSGEINVDP 60
           MGAGHARSRYLNRKEG AEGRASDWSEVVTR +            D  I   S   NVDP
Sbjct: 1   MGAGHARSRYLNRKEGGAEGRASDWSEVVTRRI------------DGAIQVRS---NVDP 60

Query: 61  TFYSLVGSGRS-GDHLGSSLLENPYIPYQDQE-------IGS-SRKKNVWLINNSLLGRR 120
           TFYSLVGSGRS GDH GSSLLENPYIPYQ  +       +GS S  K+    NN      
Sbjct: 61  TFYSLVGSGRSGGDHQGSSLLENPYIPYQCMDSYLSSAGLGSASMGKSNGAPNNV---SS 120

Query: 121 PLSHYRHTPISAMGC------AMIYFTGEVSGSSPG--WPKEASDSFMQAPLGSGDIAQL 180
              +Y  TP   +GC        ++F   ++    G    K+ + S M   L  GDIAQL
Sbjct: 121 QTKNYEITPF-ILGCDDLLHGRGLWFKSRMAQLRQGKESKKDLTPSCM-LHLARGDIAQL 179

Query: 181 VELRSCNWVVAITGWMSNC 183
           VELRSCNWVVAITGW+SNC
Sbjct: 181 VELRSCNWVVAITGWVSNC 179

[Close]

BLAST of Sed0021589 vs. ExPASy TrEMBL
Match: A0A6D2K9C9 (Uncharacterized protein ycf68 OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS38128 PE=3 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 1.5e-32
Identity = 104/199 (52.26%), Postives = 117/199 (58.79%), Query Frame = 0


Query: 1   MGAGHARSRYLNRKEGDAEGRASDWSEVVTRALSHMDSSMCSSAPDPEIWGDSGEINVDP 60
           MGAGHARSRYLNRKEG AEGRASDWSEVVTR +            D  I   S   NVDP
Sbjct: 1   MGAGHARSRYLNRKEGGAEGRASDWSEVVTRRI------------DGAIQVRS---NVDP 60

Query: 61  TFYSLVGSGRS-GDHLGSSLLENPYIPYQDQE-------IGS-SRKKNVWLINNSLLGRR 120
           TFYSLVGSGRS GDH GSSLLENPYIPYQ  +       +GS S  K+    NN      
Sbjct: 61  TFYSLVGSGRSGGDHQGSSLLENPYIPYQCMDSYLSSAGLGSASMGKSNGAPNNV---SS 120

Query: 121 PLSHYRHTPISAMGC------AMIYFTGEVSGSSPG--WPKEASDSFMQAPLGSGDIAQL 180
              +Y  TP   +GC        ++F   ++    G    K+ + S M   L  GDIAQL
Sbjct: 121 QTKNYEITPF-ILGCDDLLHGRGLWFKSRMAELRQGKESKKDLTPSCM-LHLARGDIAQL 179

Query: 181 VELRSCNWVVAITGWMSNC 183
           VELRSCNWVV ITGW+SNC
Sbjct: 181 VELRSCNWVVGITGWVSNC 179

[Close]

BLAST of Sed0021589 vs. ExPASy TrEMBL
Match: A0A2N9GIA5 (Uncharacterized protein ycf68 OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS26796 PE=3 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 3.3e-32
Identity = 92/167 (55.09%), Postives = 94/167 (56.29%), Query Frame = 0


Query: 1   MGAGHARSRYLNRKEGDAEGRASDWSEVVTRALSHMDSSMCSSAPDPEIWGDSGEINVDP 60
           MGAGHARSRYLN KEGDAEGRASDWSEVVTR +            D  I   S   NVDP
Sbjct: 584 MGAGHARSRYLNHKEGDAEGRASDWSEVVTRRI------------DGAIQVRS---NVDP 643

Query: 61  TFYSLVGSGRS-GDHLGSSLLENPYIPYQ------------------------------- 120
           TFYS+VGSGRS GDH GSSLLENPYIPYQ                               
Sbjct: 644 TFYSIVGSGRSGGDHHGSSLLENPYIPYQYMDSYLSSTGLGLEKAAINRIFLILPFRKEE 703

Query: 121 ---------DQEIGSSRKKNVWLINNSLLGRRPLSHYRHTPISAMGC 127
                    DQEIGSS KKN WLINNSLLG RP    R  PISAMGC
Sbjct: 704 VEILFPFRRDQEIGSSHKKNAWLINNSLLGLRPPQSLRMPPISAMGC 735

The following BLAST results are available for this feature:

BLAST of Sed0021589 vs. NCBI nr


Match Name	E-value	Identity	Description
PWA37412.1	1.1e-37	47.60	ATP synthase subunit beta, chloroplastic [Artemisia annua]	[more]
CAA7019109.1	1.1e-32	52.76	unnamed protein product [Microthlaspi erraticum] >CAA7022552.1 unnamed protein p...	[more]
CAA7061694.1	1.1e-32	52.76	unnamed protein product [Microthlaspi erraticum]	[more]
CAA7050893.1	3.1e-32	52.26	unnamed protein product [Microthlaspi erraticum]	[more]
PPR83386.1	2.2e-30	44.59	hypothetical protein GOBAR_AA37328 [Gossypium barbadense]	[more]

BLAST of Sed0021589 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q49KT9	3.2e-16	57.47	Uncharacterized protein ycf68 OS=Eucalyptus globulus subsp. globulus OX=71271 GN...	[more]
P52807	3.3e-05	69.44	Uncharacterized protein ycf68 OS=Pinus thunbergii OX=3350 GN=ycf68 PE=3 SV=1	[more]
Q85WV9	1.3e-04	66.67	Uncharacterized protein ycf68 OS=Pinus koraiensis OX=88728 GN=ycf68 PE=3 SV=1	[more]

BLAST of Sed0021589 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2U1KL25	5.3e-38	47.60	Uncharacterized protein ycf68 OS=Artemisia annua OX=35608 GN=CTI12_AA568190 PE=3...	[more]
A0A6D2KCL7	5.1e-33	52.76	Uncharacterized protein ycf68 OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS...	[more]
A0A6D2LMW7	5.1e-33	52.76	Uncharacterized protein ycf68 OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS...	[more]
A0A6D2K9C9	1.5e-32	52.26	Uncharacterized protein ycf68 OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS...	[more]
A0A2N9GIA5	3.3e-32	55.09	Uncharacterized protein ycf68 OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS26796 PE=3...	[more]

BLAST of Sed0021589 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 8..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	PANTHER	PTHR34890:SF13	YCF68 PROTEIN	coord: 1..56
IPR022546	Uncharacterised protein family Ycf68	PANTHER	PTHR34890	FAMILY NOT NAMED	coord: 1..56

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0021589.1	Sed0021589.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044237	cellular metabolic process
cellular_component	GO:0110165	cellular anatomical entity