Sed0021580 (gene) Chayote v1

Overview


Name	Sed0021580
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Ubiquitin-conjugating enzyme
Location	LG04: 5458562 .. 5463344 (+)
RNA-Seq Expression	Sed0021580
Synteny	Sed0021580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGCTATGATTGGCCAATTGAAAACTTGTGTTCAAATATTTGTGCGCCCAACTTGCAACGAAATCTTGAGCGATCATTTTATCGAGGAACGGTAGAGACTCGTGCTGATAACGTGTTATAAAACTAAGAATAAGAGCAACACAAGAAGAACAATAGAAGACACATATTGAGAGATAGAATTGTAGAGAGTAACTGAATGTAATTCTCATTCAATGGTGTGTCTTTACAAGCCTTTGAACACTCATATTTATAGTGTTACAAACAAGTAATATTTGGCTATTAGATGACCAATTATGGCTAATTATAAGAGGTAGTGGTTAATGAGAAAAGAGTAATTATTATTCATAACAGAAAAAATATTAAAATTTGAAGAATAAAATTATTCACAGGGTGTTTGTTTTAAGAGGAGGTGAGATGAGGTGAAGTGTTGAAGTCCAACACCTTGTTTGACCCAAGTCCACGAATGCCTACAAGAGAATCCCAAAAAAGATTGTCTTTGAAACTTAGAGATGGTGCTCTGTCTCTAAAAGTTAGAGAGAACAAACCTCATCATATATTTTTTCATAATCATTTTCATTCTATATGATTCCATCACCATCAATAATCTATAGTCTACCCGGTGGATGGACCTAAAATAACTCATCATGTGATGGATGTTTATTAAAGCGGAAGAAAGAAGAATATGATAGAATAGCGACAATGGCGTAATGGGTACGAACCCCAATGAAGAAAAATATAAAAAATAAAGAAAACACTTAAATAAAAGAAAAATAAAAAATCTGAGGCTAAATACCGATTTTTAATAACGGGAGGCGAAGGCGGCGATTTGTTAATATACGCGCTAGAAAACCGGTGGAGAAAATAAAATCACAAAATTATCTCACACACAGGTAATTCGTTTTCAACTACAAATTATCGTTATTCGTTTATTTATTTCACTTAATTCTCTTTTCAAATTTTAATTTGATTTGAATATAAGCGAAGATTTGGGATTTCTCTTTCGTCCCTTCTGCCTCTTATCCTGGTGGTCGCCGGTGGAATCGTGTTGCTTACGAATTCCTCTCGTTGAATCCGATAGGGAATTAGAATCGTGATTTTTCTTTGATTTTGTTTCTGAATTCGTCGGGATCCGCCGGAGTTCTCGCCGCGCTAGGTCACAGGTATGGAGTTTTGATCAGCTTCATTGTTTTGAGTTCTTATTCGGTTCCTTTCTTAATTTTGGCTCCGATTCGTGGATCATCGTTGTGTTTCTGCTCTGTTGTTGATGTTCATGTACCCATAGTGAAGTGTTACAGGCTTGTTTGCCCTAATTTGTTTGGAAATGTAATCTGCTTGTCTGGCCCGCGGGTTAGGACAGAGATCTAGGGTTTTTGTTCTCGGCGAGGGTTTGGGAAAGGATTTATTGACTTACAATGAGCTGGCATTTTAATTTCGCCAAGGCATGAACATAATTTGGTTCCGTTTGATAATCATTTGATTTTTTGTTTTTTAAAGTTTAAGCTTATTTTTATTAAAATTTCCTACGTGTTCCATCTTTATTGCAAGCATGTGAATGCTAACCAAATTTTTGAAAAATCAAAACAAACTTTTGGAAGCTACTGTTTTTGTTTCCAAATTTTAATTCGGTTTCTAAAAATGTAAGAGGTAGGGTAGATATCCAAGTAAGAAACAACCCAGGTAAAGATAGTTGTTGTAACCTTAAATTTCATAAACCGAAAACTAAAAACAAATAAGTTATCAAATGGGTCTTTAGTTTTCTGGATTGAATTATGTTTCTAAGAATGTTCCTTAGTGGTCTGGTCTTGTTTTAAATGGAATTAGATGCTATTAACGGATCCGTCCTTTTGGTCCATGTCGACATAGGCTCTAGACTTTCGTTTCAAACCTGCAATTTTTGTTTACCTAAAGAAACGCCCTTTCGTGGTCCATTTTTCTTTATGGAAGATAAAGGTGCATGTGCATCCTTTTCATTTAGGTGAGCTCGTTTTATGTACTTCATCCAACTTTCACTTGCTGGAATTTTGATCTTTTATATCCTTTTTCAACAGTAATTTTTCATGTTTGAATCAGGCATAATCAATTAATCATATTTCTACATTGCCCATATCCGTTCATAGCAAGTGAAGTTAAGATTGTTGTCTTTAATTATTTTCAGCCGGTGAGGATGTCTACTCCTGCAAGAAAGAGACTGATGAGAGACTTCAAGAGGTTGCAGCAAGATCCACCTGCTGGCATCAGTGGAGCTCCCCAAGACAATAATATTATGCTATGGAATGCTGTTATATTTGGGTAAGTTGGGATTATAAATTACAACGTCGATATTTTTCATATTATAACTCTTATAAATATGCTCTATTGCTTCTGTGACTTACTAATGATACGGTCTCTTACATGTTTTTTTGTTGGCTTTTGCAGGCCAGATGATACACCTTGGGATGGAGGTATTCTCAATTTCTACCTTTTTGGGCCTAAGTGACTTGTTAAGAAGACAACAACATCTTATTAGGAATTTTTCTAATGAGTTACTTATTTCTTGGTTGATGATTTTACTTTGTTTTTCTGTTTAAAACTAAAACTAATGATAAAGGATTTCCACTGCAATAAAAATAACAGTATTTCACTTCTTTCAGTTATGTAGACATATTTGTTGGCTATATTGCTACTAGCTTTAGGAGATTTATTATCAGTATTAACATTATTATTGTTATTATTATCATTATTTTGATTACAGCTTAGTGAAGCTTAATTAATTTGTCAATTTTATATTTCATGTTCACGGTCTTCTTTTAAGCTCTTTCTGCTATTTGGATATGGGATGTTTGCTGTATTTTCTGGTGGAAAAATCAAGAATAATTAGAACTTGCTAAAATTCTGATTATGGTTGCCTGCTGCTTCAAATTCCAAATGTCAGTTTGCTTTCATCTCTTCTGGTGCAAGTTAGGGGAATGCTTTCTGGAGGATCCATGTATACAGTATACCGATGTTCTTTTCTAAAATTGAAATGAATATTACAATCTTGTTTAATTTACTGGGAATTTCAATTAATTTTGCTTATTATTTTAGTATTTATCTTATAGATTTTTATTAATATATTTATCAACTTCTTATGTAGTTTTTGAATTGTAATTTAGATACTCATCGTTTGAGTTGACCAGGTACGTTTAAGCTGACCCTTCAGTTCACTGAGGATTATCCAAATAAGCCACCTACAGTCCGCTTCGTGTCTAGAATGTTCCACCCTAATAGTAAGTTCACAATCTCAAGAAGCGTGTTTTTTTAACATTTTATGCTTCATCCGATTCATTTGGGTCAATTTGAGGGCTTTCTGTAATCTCCATTCGACACTAGATTCGAGAAGATGCGTACTTAGATTTTTTGTGCAGCAACTTTCTTTTACATGGTTTCTTATATGTTTCTATATTGTGCTTAGCTACGTTTATTGTGTATTTTTCTATATTGTGCTAGCTTATTTTCTTTTGCTACAAATTTAGAATCCATATGTTAACAACATTCTGTTTACTTTATTAAACCTCTATTTGATCCCGATGTGTTATGTTTGGCTTGGAACTGGGTGACTATAAATTATAATGAGTGAAAGGCAACTATCTTGTAAAACGACAAAATAAATCTTTATCTTAGATTACGATGTAAGTTGTCAAGTTTGTTTTTAATCTCTCTGTACATGCTGCTAAGCATACACTTTTTTGCTTGTTTCGCCTTTCCCACCTGCCTTCAGTTTATGCTGATGGAAGCATTTGTTTGGACATTCTGCAAAATCAGTGGAGCCCAATCTATGATGTAGCAGCTATACTCACCTCTATTCAGGTACCACGTAATTAGTTTGGGTTATAAATGTAAAGACTGATTTTTTTCTAATCGTGGTAGCCTGTATGATTAATTGCTTCGTTTATCATTTTATGGGTACAATATAAAATGCCTGTAGTCATAACTATTAATAGAAGCGTCTCCAAGGGCCGGCGCAGTGGTTGGAGACTTGTATGCTCCCTTCAAGGTTCCGGGTTCAAGATTCACTTGTCACATTACTTCTTCGATGTTTCCGGTGCCTGGTCTAGGGACGGACATGGTTACCCTTGTCTCAAAAAAAATAACCATTAATAGAAGCATTCCTTCTCCCAGTAGTAGAACACATGGTTCATGTCCACCAGATGCCCATCAGTACATATTTATGGTGTTGGCTGTGTGAGGGAGCAAGTTAGTTGTAAACCTGCCTTGCCACTGACCCCGGCCATAAAAGACCCCATTCTTTTAGTTCTTGATTTTGATTATTATTGTTTTTATATTTAGGATCAAGTTTAAAGAACTGGAACTAGTTTCCCTGATAATCTGATTGGATTTGACCTACTCAAGAAACTCTGGCCATGGTCGTTAATCTATATTTTTATGATTATCATGCATACCAATAATGTTCAACACCACATATATACTACTGCTGTCCCCTGCAAAAAAGTAAAATTATTGGCTGATTTATTCGGTGTATTATGGAAAATGTGATAATTGACTATATTGGTGGGCTACTGAATTATGGATTTGAAAATGTTATTTTGCTTGCTCGTGCTTTTCATTGATTTGCAAAGTCCACTCTTTGTTATATTTATTACTTTTTTTAATCACATTAATCTTTCTTCTTGTAGTCGTTGCTGTGCGACCCCAATCCGAACTCTCCTGCTAATTCTGAAGCTGCAAGGATGTTTAGTGAAAACAAGCGCGAGTACAATAGAAGAGTACGTGAGATTGTGGAACAGAGCTGGACTGCTGATTAG

mRNA sequence

ATGTGCTATGATTGGCCAATTGAAAACTTGTGTTCAAATATTTGTGCGCCCAACTTGCAACGAAATCTTGAGCGATCATTTTATCGAGGAACGGTAGAGACTCGTGCTGATAACTTCTTATTCGGTTCCTTTCTTAATTTTGGCTCCGATTCGTGGATCATCGTTGACAGAGATCTAGGGTTTTTGTTCTCGGCGAGGCCGGTGAGGATGTCTACTCCTGCAAGAAAGAGACTGATGAGAGACTTCAAGAGGTTGCAGCAAGATCCACCTGCTGGCATCAGTGGAGCTCCCCAAGACAATAATATTATGCTATGGAATGCTGTTATATTTGGGCCAGATGATACACCTTGGGATGGAGGTACGTTTAAGCTGACCCTTCAGTTCACTGAGGATTATCCAAATAAGCCACCTACAGTCCGCTTCGTGTCTAGAATGTTCCACCCTAATATTTATGCTGATGGAAGCATTTGTTTGGACATTCTGCAAAATCAGTGGAGCCCAATCTATGATGTAGCAGCTATACTCACCTCTATTCAGTCGTTGCTGTGCGACCCCAATCCGAACTCTCCTGCTAATTCTGAAGCTGCAAGGATGTTTAGTGAAAACAAGCGCGAGTACAATAGAAGAGTACGTGAGATTGTGGAACAGAGCTGGACTGCTGATTAG

Coding sequence (CDS)

ATGTGCTATGATTGGCCAATTGAAAACTTGTGTTCAAATATTTGTGCGCCCAACTTGCAACGAAATCTTGAGCGATCATTTTATCGAGGAACGGTAGAGACTCGTGCTGATAACTTCTTATTCGGTTCCTTTCTTAATTTTGGCTCCGATTCGTGGATCATCGTTGACAGAGATCTAGGGTTTTTGTTCTCGGCGAGGCCGGTGAGGATGTCTACTCCTGCAAGAAAGAGACTGATGAGAGACTTCAAGAGGTTGCAGCAAGATCCACCTGCTGGCATCAGTGGAGCTCCCCAAGACAATAATATTATGCTATGGAATGCTGTTATATTTGGGCCAGATGATACACCTTGGGATGGAGGTACGTTTAAGCTGACCCTTCAGTTCACTGAGGATTATCCAAATAAGCCACCTACAGTCCGCTTCGTGTCTAGAATGTTCCACCCTAATATTTATGCTGATGGAAGCATTTGTTTGGACATTCTGCAAAATCAGTGGAGCCCAATCTATGATGTAGCAGCTATACTCACCTCTATTCAGTCGTTGCTGTGCGACCCCAATCCGAACTCTCCTGCTAATTCTGAAGCTGCAAGGATGTTTAGTGAAAACAAGCGCGAGTACAATAGAAGAGTACGTGAGATTGTGGAACAGAGCTGGACTGCTGATTAG

Protein sequence

MCYDWPIENLCSNICAPNLQRNLERSFYRGTVETRADNFLFGSFLNFGSDSWIIVDRDLGFLFSARPVRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD

Homology

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BLAST of Sed0021580 vs. NCBI nr
Match: KAA0034394.1 (ubiquitin-conjugating enzyme [Cucumis melo var. makuwa] >TYK15527.1 ubiquitin-conjugating enzyme [Cucumis melo var. makuwa])

HSP 1 Score: 326.6 bits (836), Expect = 1.6e-85
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 67  PVRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTL 126
           PVRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTL
Sbjct: 2   PVRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTL 61

Query: 127 QFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPN 186
           QFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPN
Sbjct: 62  QFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPN 121

Query: 187 PNSPANSEAARMFSENKREYNRRVREIVEQSWTAD 222
           PNSPANSEAARMFSENKREYNRRVREIVEQSWTAD
Sbjct: 122 PNSPANSEAARMFSENKREYNRRVREIVEQSWTAD 156

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BLAST of Sed0021580 vs. NCBI nr
Match: XP_016736213.1 (ubiquitin-conjugating enzyme E2 2 [Gossypium hirsutum])

HSP 1 Score: 326.6 bits (836), Expect = 1.6e-85
Identity = 158/168 (94.05%), Postives = 160/168 (95.24%), Query Frame = 0


Query: 55  VDRDL-GFLFSARPVRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPD 114
           V RDL G     + V+MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPD
Sbjct: 11  VARDLAGLCMHLKEVKMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPD 70

Query: 115 DTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAA 174
           DTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAA
Sbjct: 71  DTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAA 130

Query: 175 ILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD 222
           ILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD
Sbjct: 131 ILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD 178

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BLAST of Sed0021580 vs. NCBI nr
Match: KAF3966055.1 (hypothetical protein CMV_009812 [Castanea mollissima])

HSP 1 Score: 325.9 bits (834), Expect = 2.8e-85
Identity = 155/157 (98.73%), Postives = 156/157 (99.36%), Query Frame = 0


Query: 65  ARPVRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKL 124
           +R VRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKL
Sbjct: 33  SRAVRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKL 92

Query: 125 TLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCD 184
           TLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCD
Sbjct: 93  TLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCD 152

Query: 185 PNPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD 222
           PNPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD
Sbjct: 153 PNPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD 189

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BLAST of Sed0021580 vs. NCBI nr
Match: KAG7032198.1 (Ubiquitin-conjugating enzyme E2 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 325.9 bits (834), Expect = 2.8e-85
Identity = 154/156 (98.72%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 66  RPVRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLT 125
           RPVRMSTPARKRLMRDF+RLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLT
Sbjct: 3   RPVRMSTPARKRLMRDFRRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLT 62

Query: 126 LQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDP 185
           LQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDP
Sbjct: 63  LQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDP 122

Query: 186 NPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD 222
           NPNSPANSEAARMFSENKR+YNRRVREIVEQSWTAD
Sbjct: 123 NPNSPANSEAARMFSENKRDYNRRVREIVEQSWTAD 158

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BLAST of Sed0021580 vs. NCBI nr
Match: CBI32005.3 (unnamed protein product, partial [Vitis vinifera])

HSP 1 Score: 325.1 bits (832), Expect = 4.7e-85
Identity = 155/158 (98.10%), Postives = 156/158 (98.73%), Query Frame = 0


Query: 64  SARPVRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFK 123
           S + VRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFK
Sbjct: 34  SLQAVRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFK 93

Query: 124 LTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLC 183
           LTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLC
Sbjct: 94  LTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLC 153

Query: 184 DPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD 222
           DPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD
Sbjct: 154 DPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD 191

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BLAST of Sed0021580 vs. ExPASy Swiss-Prot
Match: P42745 (Ubiquitin-conjugating enzyme E2 2 OS=Arabidopsis thaliana OX=3702 GN=UBC2 PE=2 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 8.3e-85
Identity = 148/152 (97.37%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 70  MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 129
           MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKL+LQF+
Sbjct: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60

Query: 130 EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 189
           EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS
Sbjct: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120

Query: 190 PANSEAARMFSENKREYNRRVREIVEQSWTAD 222
           PANSEAARMFSE+KREYNRRVRE+VEQSWTAD
Sbjct: 121 PANSEAARMFSESKREYNRRVREVVEQSWTAD 152

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BLAST of Sed0021580 vs. ExPASy Swiss-Prot
Match: P35130 (Ubiquitin-conjugating enzyme E2 2 OS=Medicago sativa OX=3879 GN=UBC2 PE=2 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 8.3e-85
Identity = 148/152 (97.37%), Postives = 151/152 (99.34%), Query Frame = 0


Query: 70  MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 129
           MSTPARKRLMRDFKRLQ DPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKL+LQF+
Sbjct: 1   MSTPARKRLMRDFKRLQHDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60

Query: 130 EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 189
           EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS
Sbjct: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120

Query: 190 PANSEAARMFSENKREYNRRVREIVEQSWTAD 222
           PANSEAARMFSENKREYNRRVRE+VEQSWTAD
Sbjct: 121 PANSEAARMFSENKREYNRRVREVVEQSWTAD 152

[Close]

BLAST of Sed0021580 vs. ExPASy Swiss-Prot
Match: P25866 (Ubiquitin-conjugating enzyme E2 2 OS=Triticum aestivum OX=4565 GN=UBC2 PE=1 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 2.4e-84
Identity = 147/152 (96.71%), Postives = 150/152 (98.68%), Query Frame = 0


Query: 70  MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 129
           MSTPARKRLMRDFKRLQQDPPAGISGAP DNNI LWNAVIFGPDDTPWDGGTFKLTLQFT
Sbjct: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPHDNNITLWNAVIFGPDDTPWDGGTFKLTLQFT 60

Query: 130 EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 189
           EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS
Sbjct: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120

Query: 190 PANSEAARMFSENKREYNRRVREIVEQSWTAD 222
           PANSEAARM+SENKREYNR+VRE+VEQSWTAD
Sbjct: 121 PANSEAARMYSENKREYNRKVREVVEQSWTAD 152

[Close]

BLAST of Sed0021580 vs. ExPASy Swiss-Prot
Match: P25865 (Ubiquitin-conjugating enzyme E2 1 OS=Arabidopsis thaliana OX=3702 GN=UBC1 PE=1 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 4.1e-84
Identity = 146/152 (96.05%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 70  MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 129
           MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKL+LQF+
Sbjct: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60

Query: 130 EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 189
           EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS
Sbjct: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120

Query: 190 PANSEAARMFSENKREYNRRVREIVEQSWTAD 222
           PANSEAARM+SE+KREYNRRVR++VEQSWTAD
Sbjct: 121 PANSEAARMYSESKREYNRRVRDVVEQSWTAD 152

[Close]

BLAST of Sed0021580 vs. ExPASy Swiss-Prot
Match: P42746 (Ubiquitin-conjugating enzyme E2 3 OS=Arabidopsis thaliana OX=3702 GN=UBC3 PE=2 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 1.6e-75
Identity = 132/149 (88.59%), Postives = 143/149 (95.97%), Query Frame = 0


Query: 70  MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 129
           M+TPA+KRLM DFKRLQ+DPP GISGAPQDNNIM WNA+IFGP+DTPWDGGTFKLTL FT
Sbjct: 1   MTTPAKKRLMWDFKRLQKDPPVGISGAPQDNNIMHWNALIFGPEDTPWDGGTFKLTLHFT 60

Query: 130 EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 189
           EDYPNKPP VRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAA+LTSIQSLLCDPNP+S
Sbjct: 61  EDYPNKPPIVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAVLTSIQSLLCDPNPDS 120

Query: 190 PANSEAARMFSENKREYNRRVREIVEQSW 219
           PAN+EAAR+FSENKREYNR+V EIVEQS+
Sbjct: 121 PANAEAARLFSENKREYNRKVIEIVEQSY 149

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BLAST of Sed0021580 vs. ExPASy TrEMBL
Match: A0A0A0KQJ6 (UBC core domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G604380 PE=3 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 2.7e-86
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 66  RPVRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLT 125
           RPVRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLT
Sbjct: 72  RPVRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLT 131

Query: 126 LQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDP 185
           LQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDP
Sbjct: 132 LQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDP 191

Query: 186 NPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD 222
           NPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD
Sbjct: 192 NPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD 227

[Close]

BLAST of Sed0021580 vs. ExPASy TrEMBL
Match: A0A5A7ST60 (Ubiquitin-conjugating enzyme OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G00190 PE=3 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 7.8e-86
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 67  PVRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTL 126
           PVRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTL
Sbjct: 2   PVRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTL 61

Query: 127 QFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPN 186
           QFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPN
Sbjct: 62  QFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPN 121

Query: 187 PNSPANSEAARMFSENKREYNRRVREIVEQSWTAD 222
           PNSPANSEAARMFSENKREYNRRVREIVEQSWTAD
Sbjct: 122 PNSPANSEAARMFSENKREYNRRVREIVEQSWTAD 156

[Close]

BLAST of Sed0021580 vs. ExPASy TrEMBL
Match: A0A1U8NE34 (ubiquitin-conjugating enzyme E2 2 isoform X1 OS=Gossypium hirsutum OX=3635 GN=LOC107946416 PE=3 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 7.8e-86
Identity = 158/168 (94.05%), Postives = 160/168 (95.24%), Query Frame = 0


Query: 55  VDRDL-GFLFSARPVRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPD 114
           V RDL G     + V+MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPD
Sbjct: 11  VARDLAGLCMHLKEVKMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPD 70

Query: 115 DTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAA 174
           DTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAA
Sbjct: 71  DTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAA 130

Query: 175 ILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD 222
           ILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD
Sbjct: 131 ILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD 178

[Close]

BLAST of Sed0021580 vs. ExPASy TrEMBL
Match: A0A1D1ZJA7 (Ubiquitin-conjugating enzyme E2 2 OS=Anthurium amnicola OX=1678845 GN=UBC2_3 PE=3 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 7.8e-86
Identity = 156/160 (97.50%), Postives = 156/160 (97.50%), Query Frame = 0


Query: 62  LFSARPVRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGT 121
           L   R VRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGT
Sbjct: 84  LLEVRGVRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGT 143

Query: 122 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSL 181
           FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSL
Sbjct: 144 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSL 203

Query: 182 LCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD 222
           LCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD
Sbjct: 204 LCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD 243

[Close]

BLAST of Sed0021580 vs. ExPASy TrEMBL
Match: A0A314YV04 (UBC core domain-containing protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_14578 PE=3 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 2.3e-85
Identity = 155/158 (98.10%), Postives = 156/158 (98.73%), Query Frame = 0


Query: 64  SARPVRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFK 123
           S + VRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFK
Sbjct: 64  SQQAVRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFK 123

Query: 124 LTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLC 183
           LTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLC
Sbjct: 124 LTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLC 183

Query: 184 DPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD 222
           DPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD
Sbjct: 184 DPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD 221

[Close]

BLAST of Sed0021580 vs. TAIR 10
Match: AT2G02760.1 (ubiquiting-conjugating enzyme 2 )

HSP 1 Score: 314.7 bits (805), Expect = 5.9e-86
Identity = 148/152 (97.37%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 70  MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 129
           MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKL+LQF+
Sbjct: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60

Query: 130 EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 189
           EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS
Sbjct: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120

Query: 190 PANSEAARMFSENKREYNRRVREIVEQSWTAD 222
           PANSEAARMFSE+KREYNRRVRE+VEQSWTAD
Sbjct: 121 PANSEAARMFSESKREYNRRVREVVEQSWTAD 152

[Close]

BLAST of Sed0021580 vs. TAIR 10
Match: AT1G14400.1 (ubiquitin carrier protein 1 )

HSP 1 Score: 312.4 bits (799), Expect = 2.9e-85
Identity = 146/152 (96.05%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 70  MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 129
           MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKL+LQF+
Sbjct: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60

Query: 130 EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 189
           EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS
Sbjct: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120

Query: 190 PANSEAARMFSENKREYNRRVREIVEQSWTAD 222
           PANSEAARM+SE+KREYNRRVR++VEQSWTAD
Sbjct: 121 PANSEAARMYSESKREYNRRVRDVVEQSWTAD 152

[Close]

BLAST of Sed0021580 vs. TAIR 10
Match: AT1G14400.2 (ubiquitin carrier protein 1 )

HSP 1 Score: 312.4 bits (799), Expect = 2.9e-85
Identity = 146/152 (96.05%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 70  MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 129
           MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKL+LQF+
Sbjct: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60

Query: 130 EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 189
           EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS
Sbjct: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120

Query: 190 PANSEAARMFSENKREYNRRVREIVEQSWTAD 222
           PANSEAARM+SE+KREYNRRVR++VEQSWTAD
Sbjct: 121 PANSEAARMYSESKREYNRRVRDVVEQSWTAD 152

[Close]

BLAST of Sed0021580 vs. TAIR 10
Match: AT5G62540.1 (ubiquitin-conjugating enzyme 3 )

HSP 1 Score: 283.9 bits (725), Expect = 1.1e-76
Identity = 132/149 (88.59%), Postives = 143/149 (95.97%), Query Frame = 0


Query: 70  MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 129
           M+TPA+KRLM DFKRLQ+DPP GISGAPQDNNIM WNA+IFGP+DTPWDGGTFKLTL FT
Sbjct: 1   MTTPAKKRLMWDFKRLQKDPPVGISGAPQDNNIMHWNALIFGPEDTPWDGGTFKLTLHFT 60

Query: 130 EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 189
           EDYPNKPP VRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAA+LTSIQSLLCDPNP+S
Sbjct: 61  EDYPNKPPIVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAVLTSIQSLLCDPNPDS 120

Query: 190 PANSEAARMFSENKREYNRRVREIVEQSW 219
           PAN+EAAR+FSENKREYNR+V EIVEQS+
Sbjct: 121 PANAEAARLFSENKREYNRKVIEIVEQSY 149

[Close]

BLAST of Sed0021580 vs. TAIR 10
Match: AT4G27960.1 (ubiquitin conjugating enzyme 9 )

HSP 1 Score: 145.6 bits (366), Expect = 4.8e-35
Identity = 67/146 (45.89%), Postives = 93/146 (63.70%), Query Frame = 0


Query: 74  ARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYP 133
           A KR++++ K LQ+DPP   S  P   ++  W A I GP D+P+ GG F +T+ F  DYP
Sbjct: 2   ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYP 61

Query: 134 NKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANS 193
            KPP V F +++FHPNI ++GSICLDIL+ QWSP   ++ +L SI SLL DPNP+ P   
Sbjct: 62  FKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121

Query: 194 EAARMFSENKREYNRRVREIVEQSWT 220
           E A M+  +K +Y     E   ++WT
Sbjct: 122 EIAHMYKTDKNKY-----ESTARTWT 142

The following BLAST results are available for this feature:

BLAST of Sed0021580 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0034394.1	1.6e-85	100.00	ubiquitin-conjugating enzyme [Cucumis melo var. makuwa] >TYK15527.1 ubiquitin-co...	[more]
XP_016736213.1	1.6e-85	94.05	ubiquitin-conjugating enzyme E2 2 [Gossypium hirsutum]	[more]
KAF3966055.1	2.8e-85	98.73	hypothetical protein CMV_009812 [Castanea mollissima]	[more]
KAG7032198.1	2.8e-85	98.72	Ubiquitin-conjugating enzyme E2 2, partial [Cucurbita argyrosperma subsp. argyro...	[more]
CBI32005.3	4.7e-85	98.10	unnamed protein product, partial [Vitis vinifera]	[more]

BLAST of Sed0021580 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P42745	8.3e-85	97.37	Ubiquitin-conjugating enzyme E2 2 OS=Arabidopsis thaliana OX=3702 GN=UBC2 PE=2 S...	[more]
P35130	8.3e-85	97.37	Ubiquitin-conjugating enzyme E2 2 OS=Medicago sativa OX=3879 GN=UBC2 PE=2 SV=1	[more]
P25866	2.4e-84	96.71	Ubiquitin-conjugating enzyme E2 2 OS=Triticum aestivum OX=4565 GN=UBC2 PE=1 SV=1	[more]
P25865	4.1e-84	96.05	Ubiquitin-conjugating enzyme E2 1 OS=Arabidopsis thaliana OX=3702 GN=UBC1 PE=1 S...	[more]
P42746	1.6e-75	88.59	Ubiquitin-conjugating enzyme E2 3 OS=Arabidopsis thaliana OX=3702 GN=UBC3 PE=2 S...	[more]

BLAST of Sed0021580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KQJ6	2.7e-86	100.00	UBC core domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G604380 PE...	[more]
A0A5A7ST60	7.8e-86	100.00	Ubiquitin-conjugating enzyme OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1U8NE34	7.8e-86	94.05	ubiquitin-conjugating enzyme E2 2 isoform X1 OS=Gossypium hirsutum OX=3635 GN=LO...	[more]
A0A1D1ZJA7	7.8e-86	97.50	Ubiquitin-conjugating enzyme E2 2 OS=Anthurium amnicola OX=1678845 GN=UBC2_3 PE=...	[more]
A0A314YV04	2.3e-85	98.10	UBC core domain-containing protein OS=Prunus yedoensis var. nudiflora OX=2094558...	[more]

BLAST of Sed0021580 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G02760.1	5.9e-86	97.37	ubiquiting-conjugating enzyme 2	[more]
AT1G14400.1	2.9e-85	96.05	ubiquitin carrier protein 1	[more]
AT1G14400.2	2.9e-85	96.05	ubiquitin carrier protein 1	[more]
AT5G62540.1	1.1e-76	88.59	ubiquitin-conjugating enzyme 3	[more]
AT4G27960.1	4.8e-35	45.89	ubiquitin conjugating enzyme 9	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM00212	ubc_7	coord: 76..219 e-value: 5.4E-69 score: 245.2
None	No IPR available	PANTHER	PTHR24067:SF319	UBIQUITIN-CONJUGATING ENZYME E2 2	coord: 60..221
None	No IPR available	PANTHER	PTHR24067	UBIQUITIN-CONJUGATING ENZYME E2	coord: 60..221
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	GENE3D	3.10.110.10	Ubiquitin Conjugating Enzyme	coord: 68..217 e-value: 1.5E-67 score: 227.9
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	SUPERFAMILY	54495	UBC-like	coord: 65..219
IPR000608	Ubiquitin-conjugating enzyme E2	PFAM	PF00179	UQ_con	coord: 77..213 e-value: 2.9E-52 score: 176.0
IPR000608	Ubiquitin-conjugating enzyme E2	PROSITE	PS50127	UBC_2	coord: 73..219 score: 60.566891
IPR000608	Ubiquitin-conjugating enzyme E2	CDD	cd00195	UBCc	coord: 76..214 e-value: 2.36385E-74 score: 219.381
IPR023313	Ubiquitin-conjugating enzyme, active site	PROSITE	PS00183	UBC_1	coord: 146..161

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0021580.1	Sed0021580.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006281	DNA repair
biological_process	GO:0016574	histone ubiquitination
biological_process	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process
biological_process	GO:0000209	protein polyubiquitination
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0017172	cysteine dioxygenase activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0061631	ubiquitin conjugating enzyme activity