Sed0021560 (gene) Chayote v1

Overview


Name	Sed0021560
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Transmembrane protein, putative
Location	LG10: 3082022 .. 3082847 (-)
RNA-Seq Expression	Sed0021560
Synteny	Sed0021560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCAAAAATGCATTTAATCCCCAATCTTGAACCGAGTCTTGACAAAGCTCTCCCCAGTCCTCCAAAGCAGAGGTTGAAAAGGTGGGAACCATGGCGGATTCGGAAACCGTAAGAAGGCAAAGCCCGGCGATCTGGAAAGAAAGCGGCGTGCAAGCGCTGAACACCATAATCCAACTCCACTTCGAGAAAACCCTGGAGAAGAAGGGCGCCATAGATCTGCAGAAGAAAGCTCTGCAGAAGCTGTTCCAGCTGTTCTTCCTCTTCCTCAGCCTCGTCTTCCTCGCCCTCTCCCTCTCCCCCCGCCTCCAATGCCGCCACTGCTGGATCCCCATCTGCCTCCTCTCCGCCGCCCATCTCAGCTTCTACCTCTCCCTCGCCCAAACCCTCCGCTGCGTCAACGCCTTCAAGTACCAGCGCCGCTGCCACAAGCTCACCCTCGGTTTGGCCACCCAGAAGCTCAGGGACTTCAATCTCAGGATCAGCGGCGGCGGCGACGGAGGGGGCTTTGATGGGGAGTTTGACATTTCCTACCAGGAGCCGCCGGAGAGCTATTTGGGTAAGTTTAAGAGGAATTGGGCTCTCTATTTTGCCTTTTTGCTTTTTATTTATGCCTTTATGATTTCTTCCTCTGTTGTTCTTCTCTGTTCTTGATTCCCGATTTCGTTCCACATTTCAATTCCTAACTTCTTCAGATTTATTTTTTAGTGTTTGGTTTCGCCTGTTTGAATTTTTTTTGTTTTCTCACTGTAATTTAATTTGTTTGTTCTCATTTTCTATCTATATATATTGAATTACCATTTTATGTTGGGTATTGTAGTCAATCAATC

mRNA sequence

CCAAAAATGCATTTAATCCCCAATCTTGAACCGAGTCTTGACAAAGCTCTCCCCAGTCCTCCAAAGCAGAGGTTGAAAAGGTGGGAACCATGGCGGATTCGGAAACCGTAAGAAGGCAAAGCCCGGCGATCTGGAAAGAAAGCGGCGTGCAAGCGCTGAACACCATAATCCAACTCCACTTCGAGAAAACCCTGGAGAAGAAGGGCGCCATAGATCTGCAGAAGAAAGCTCTGCAGAAGCTGTTCCAGCTGTTCTTCCTCTTCCTCAGCCTCGTCTTCCTCGCCCTCTCCCTCTCCCCCCGCCTCCAATGCCGCCACTGCTGGATCCCCATCTGCCTCCTCTCCGCCGCCCATCTCAGCTTCTACCTCTCCCTCGCCCAAACCCTCCGCTGCGTCAACGCCTTCAAGTACCAGCGCCGCTGCCACAAGCTCACCCTCGGTTTGGCCACCCAGAAGCTCAGGGACTTCAATCTCAGGATCAGCGGCGGCGGCGACGGAGGGGGCTTTGATGGGGAGTTTGACATTTCCTACCAGGAGCCGCCGGAGAGCTATTTGGGTAAGTTTAAGAGGAATTGGGCTCTCTATTTTGCCTTTTTGCTTTTTATTTATGCCTTTATGATTTCTTCCTCTGTTGTTCTTCTCTGTTCTTGATTCCCGATTTCGTTCCACATTTCAATTCCTAACTTCTTCAGATTTATTTTTTAGTGTTTGGTTTCGCCTGTTTGAATTTTTTTTGTTTTCTCACTGTAATTTAATTTGTTTGTTCTCATTTTCTATCTATATATATTGAATTACCATTTTATGTTGGGTATTGTAGTCAATCAATC

Coding sequence (CDS)

ATGGCGGATTCGGAAACCGTAAGAAGGCAAAGCCCGGCGATCTGGAAAGAAAGCGGCGTGCAAGCGCTGAACACCATAATCCAACTCCACTTCGAGAAAACCCTGGAGAAGAAGGGCGCCATAGATCTGCAGAAGAAAGCTCTGCAGAAGCTGTTCCAGCTGTTCTTCCTCTTCCTCAGCCTCGTCTTCCTCGCCCTCTCCCTCTCCCCCCGCCTCCAATGCCGCCACTGCTGGATCCCCATCTGCCTCCTCTCCGCCGCCCATCTCAGCTTCTACCTCTCCCTCGCCCAAACCCTCCGCTGCGTCAACGCCTTCAAGTACCAGCGCCGCTGCCACAAGCTCACCCTCGGTTTGGCCACCCAGAAGCTCAGGGACTTCAATCTCAGGATCAGCGGCGGCGGCGACGGAGGGGGCTTTGATGGGGAGTTTGACATTTCCTACCAGGAGCCGCCGGAGAGCTATTTGGGTAAGTTTAAGAGGAATTGGGCTCTCTATTTTGCCTTTTTGCTTTTTATTTATGCCTTTATGATTTCTTCCTCTGTTGTTCTTCTCTGTTCTTGA

Protein sequence

MADSETVRRQSPAIWKESGVQALNTIIQLHFEKTLEKKGAIDLQKKALQKLFQLFFLFLSLVFLALSLSPRLQCRHCWIPICLLSAAHLSFYLSLAQTLRCVNAFKYQRRCHKLTLGLATQKLRDFNLRISGGGDGGGFDGEFDISYQEPPESYLGKFKRNWALYFAFLLFIYAFMISSSVVLLCS

Homology

[Close]

BLAST of Sed0021560 vs. NCBI nr
Match: XP_038883211.1 (uncharacterized protein LOC120074230 [Benincasa hispida])

HSP 1 Score: 282.3 bits (721), Expect = 2.9e-72
Identity = 144/192 (75.00%), Postives = 162/192 (84.38%), Query Frame = 0


Query: 1   MADSETVRRQSPAIWKESGVQALNTIIQLHFEKTLEKKGAIDLQKKALQKLFQLFFLFLS 60
           MAD ET  RQ P+I K++ +QALNTIIQLHFEKTLEKK AIDLQKK L KLFQLFF+FL 
Sbjct: 1   MADMETQSRQHPSISKDTALQALNTIIQLHFEKTLEKKRAIDLQKKELHKLFQLFFIFLG 60

Query: 61  LVFLALSLSPRLQCRHCWIPICLLSAAHLSFYLSLAQTLRCVNAFKYQRRCHKLTLGLAT 120
           L+FLA SLSPRL+CRHCWIPI LLS +HLSFY+S+AQTLRC+N FKYQRRCHKLTLG AT
Sbjct: 61  LIFLAQSLSPRLECRHCWIPIALLSISHLSFYVSVAQTLRCINGFKYQRRCHKLTLGFAT 120

Query: 121 QKLRDFNLRIS------GGGDGGGFDGEFDISYQEPPESYLGKFKRNWALYFAFLLFIYA 180
           ++LR+  ++IS      GG DGG  D EF+I YQEPPESYLGKFKRNWALYF FL+FIY 
Sbjct: 121 ERLREIKMKISAAAAAGGGFDGGLVDEEFEIHYQEPPESYLGKFKRNWALYFGFLIFIYG 180

Query: 181 FMISSSVVLLCS 187
           FMISSSVVLLCS
Sbjct: 181 FMISSSVVLLCS 192

[Close]

BLAST of Sed0021560 vs. NCBI nr
Match: XP_008441005.1 (PREDICTED: uncharacterized protein LOC103485248 [Cucumis melo])

HSP 1 Score: 280.0 bits (715), Expect = 1.5e-71
Identity = 143/190 (75.26%), Postives = 162/190 (85.26%), Query Frame = 0


Query: 1   MADSETVRRQSPAIWKESGVQALNTIIQLHFEKTLEKKGAIDLQKKALQKLFQLFFLFLS 60
           MAD ET  RQ P+I KE+ +QALNTIIQLHFEKTLEKK AIDLQKK L KLFQLFF+FL+
Sbjct: 1   MADIETQIRQHPSISKETALQALNTIIQLHFEKTLEKKRAIDLQKKELHKLFQLFFIFLA 60

Query: 61  LVFLALSLSPRLQCRHCWIPICLLSAAHLSFYLSLAQTLRCVNAFKYQRRCHKLTLGLAT 120
           L+FL  SLSPRL+CRHCWIPI LLS +HLSFY+S+AQTLRC+N FKYQRRCHKLTLG AT
Sbjct: 61  LIFLTQSLSPRLECRHCWIPIALLSVSHLSFYVSVAQTLRCINGFKYQRRCHKLTLGFAT 120

Query: 121 QKLRDFNLRIS----GGGDGGGFDGEFDISYQEPPESYLGKFKRNWALYFAFLLFIYAFM 180
           ++LR+  ++IS    GG DGG  D EF+I YQEPPESYLGKFKRNWAL+F FL+FIY FM
Sbjct: 121 ERLREMKMKISAAVDGGFDGGVTDEEFEIHYQEPPESYLGKFKRNWALHFGFLIFIYLFM 180

Query: 181 ISSSVVLLCS 187
           ISSSVVLLCS
Sbjct: 181 ISSSVVLLCS 190

[Close]

BLAST of Sed0021560 vs. NCBI nr
Match: XP_011657774.1 (uncharacterized protein LOC101206076 [Cucumis sativus])

HSP 1 Score: 276.6 bits (706), Expect = 1.6e-70
Identity = 141/190 (74.21%), Postives = 161/190 (84.74%), Query Frame = 0


Query: 1   MADSETVRRQSPAIWKESGVQALNTIIQLHFEKTLEKKGAIDLQKKALQKLFQLFFLFLS 60
           MAD +T  RQ P+I KE+ +QALNTIIQLHFEKTLEKK AIDLQKK L KLFQLFF+FL+
Sbjct: 1   MADIDTQIRQHPSISKETALQALNTIIQLHFEKTLEKKRAIDLQKKELHKLFQLFFIFLA 60

Query: 61  LVFLALSLSPRLQCRHCWIPICLLSAAHLSFYLSLAQTLRCVNAFKYQRRCHKLTLGLAT 120
           L+FL  SLSPRL+CRHCWIPI LLS +HLSFY+S+AQTLRC+N FKYQRRCHKLTLG AT
Sbjct: 61  LIFLTQSLSPRLECRHCWIPIALLSVSHLSFYVSVAQTLRCINGFKYQRRCHKLTLGFAT 120

Query: 121 QKLRDFNLRIS----GGGDGGGFDGEFDISYQEPPESYLGKFKRNWALYFAFLLFIYAFM 180
           ++LR+  ++IS     G DGG  D EF+I YQEPPESYLGKFKRNWAL+F FL+FIY FM
Sbjct: 121 ERLREMRMKISAAVDAGFDGGVTDEEFEIHYQEPPESYLGKFKRNWALHFGFLIFIYLFM 180

Query: 181 ISSSVVLLCS 187
           ISSSVVLLCS
Sbjct: 181 ISSSVVLLCS 190

[Close]

BLAST of Sed0021560 vs. NCBI nr
Match: XP_022949634.1 (uncharacterized protein LOC111452966 [Cucurbita moschata] >XP_023543401.1 uncharacterized protein LOC111803295 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 275.0 bits (702), Expect = 4.7e-70
Identity = 142/189 (75.13%), Postives = 159/189 (84.13%), Query Frame = 0


Query: 1   MADSETVRRQSPAIWKESGVQALNTIIQLHFEKTLEKKGAIDLQKKALQKLFQLFFLFLS 60
           MAD E   R  P+I  E+ +QALNT+IQLHFEKTLEKK AIDLQKK L  LF LFF+FL+
Sbjct: 1   MADLEAHTRPHPSISTETALQALNTLIQLHFEKTLEKKHAIDLQKKQLHNLFHLFFIFLA 60

Query: 61  LVFLALSLSPRLQCRHCWIPICLLSAAHLSFYLSLAQTLRCVNAFKYQRRCHKLTLGLAT 120
           L+FLA SLSPRLQCRHCWIPI LLS +HL+FY+S+AQTLRC+NAFKYQRRCHKLTLGLAT
Sbjct: 61  LIFLAQSLSPRLQCRHCWIPIALLSLSHLTFYVSVAQTLRCINAFKYQRRCHKLTLGLAT 120

Query: 121 QKLRDFNLRIS---GGGDGGGFDGEFDISYQEPPESYLGKFKRNWALYFAFLLFIYAFMI 180
           +KLR   +RIS   GG DGG  D EF+I YQEPPESYLGKFKRNWAL+F FL+FIY FMI
Sbjct: 121 EKLRLMKMRISTAGGGLDGGAADEEFEIHYQEPPESYLGKFKRNWALHFGFLIFIYGFMI 180

Query: 181 SSSVVLLCS 187
           SSSVVLLCS
Sbjct: 181 SSSVVLLCS 189

[Close]

BLAST of Sed0021560 vs. NCBI nr
Match: XP_022977846.1 (uncharacterized protein LOC111478021 [Cucurbita maxima])

HSP 1 Score: 273.9 bits (699), Expect = 1.0e-69
Identity = 141/189 (74.60%), Postives = 158/189 (83.60%), Query Frame = 0


Query: 1   MADSETVRRQSPAIWKESGVQALNTIIQLHFEKTLEKKGAIDLQKKALQKLFQLFFLFLS 60
           MAD E   R  P+I  E+ +QALNT+IQLHFEKTLEKK AIDLQKK L  LF LFF+FL+
Sbjct: 1   MADLEAHTRPHPSISTETALQALNTLIQLHFEKTLEKKHAIDLQKKXLHNLFHLFFIFLA 60

Query: 61  LVFLALSLSPRLQCRHCWIPICLLSAAHLSFYLSLAQTLRCVNAFKYQRRCHKLTLGLAT 120
           L+FLA SLSPRLQCRHCWIPI LLS +HL+FY+S+AQTLRC+NAFKYQRRCHKLTLGLAT
Sbjct: 61  LIFLAQSLSPRLQCRHCWIPIALLSLSHLTFYVSIAQTLRCINAFKYQRRCHKLTLGLAT 120

Query: 121 QKLRDFNLRISGGG---DGGGFDGEFDISYQEPPESYLGKFKRNWALYFAFLLFIYAFMI 180
           +KLR   +RIS  G   DGG  D EF+I YQEPPESYLGKFKRNWAL+F FL+FIY FMI
Sbjct: 121 EKLRLMKMRISTAGGVLDGGAADEEFEIHYQEPPESYLGKFKRNWALHFGFLIFIYGFMI 180

Query: 181 SSSVVLLCS 187
           SSSVVLLCS
Sbjct: 181 SSSVVLLCS 189

[Close]

BLAST of Sed0021560 vs. ExPASy TrEMBL
Match: A0A1S3B333 (uncharacterized protein LOC103485248 OS=Cucumis melo OX=3656 GN=LOC103485248 PE=4 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 7.1e-72
Identity = 143/190 (75.26%), Postives = 162/190 (85.26%), Query Frame = 0


Query: 1   MADSETVRRQSPAIWKESGVQALNTIIQLHFEKTLEKKGAIDLQKKALQKLFQLFFLFLS 60
           MAD ET  RQ P+I KE+ +QALNTIIQLHFEKTLEKK AIDLQKK L KLFQLFF+FL+
Sbjct: 1   MADIETQIRQHPSISKETALQALNTIIQLHFEKTLEKKRAIDLQKKELHKLFQLFFIFLA 60

Query: 61  LVFLALSLSPRLQCRHCWIPICLLSAAHLSFYLSLAQTLRCVNAFKYQRRCHKLTLGLAT 120
           L+FL  SLSPRL+CRHCWIPI LLS +HLSFY+S+AQTLRC+N FKYQRRCHKLTLG AT
Sbjct: 61  LIFLTQSLSPRLECRHCWIPIALLSVSHLSFYVSVAQTLRCINGFKYQRRCHKLTLGFAT 120

Query: 121 QKLRDFNLRIS----GGGDGGGFDGEFDISYQEPPESYLGKFKRNWALYFAFLLFIYAFM 180
           ++LR+  ++IS    GG DGG  D EF+I YQEPPESYLGKFKRNWAL+F FL+FIY FM
Sbjct: 121 ERLREMKMKISAAVDGGFDGGVTDEEFEIHYQEPPESYLGKFKRNWALHFGFLIFIYLFM 180

Query: 181 ISSSVVLLCS 187
           ISSSVVLLCS
Sbjct: 181 ISSSVVLLCS 190

[Close]

BLAST of Sed0021560 vs. ExPASy TrEMBL
Match: A0A0A0KKV5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G485130 PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 7.8e-71
Identity = 141/190 (74.21%), Postives = 161/190 (84.74%), Query Frame = 0


Query: 1   MADSETVRRQSPAIWKESGVQALNTIIQLHFEKTLEKKGAIDLQKKALQKLFQLFFLFLS 60
           MAD +T  RQ P+I KE+ +QALNTIIQLHFEKTLEKK AIDLQKK L KLFQLFF+FL+
Sbjct: 1   MADIDTQIRQHPSISKETALQALNTIIQLHFEKTLEKKRAIDLQKKELHKLFQLFFIFLA 60

Query: 61  LVFLALSLSPRLQCRHCWIPICLLSAAHLSFYLSLAQTLRCVNAFKYQRRCHKLTLGLAT 120
           L+FL  SLSPRL+CRHCWIPI LLS +HLSFY+S+AQTLRC+N FKYQRRCHKLTLG AT
Sbjct: 61  LIFLTQSLSPRLECRHCWIPIALLSVSHLSFYVSVAQTLRCINGFKYQRRCHKLTLGFAT 120

Query: 121 QKLRDFNLRIS----GGGDGGGFDGEFDISYQEPPESYLGKFKRNWALYFAFLLFIYAFM 180
           ++LR+  ++IS     G DGG  D EF+I YQEPPESYLGKFKRNWAL+F FL+FIY FM
Sbjct: 121 ERLREMRMKISAAVDAGFDGGVTDEEFEIHYQEPPESYLGKFKRNWALHFGFLIFIYLFM 180

Query: 181 ISSSVVLLCS 187
           ISSSVVLLCS
Sbjct: 181 ISSSVVLLCS 190

[Close]

BLAST of Sed0021560 vs. ExPASy TrEMBL
Match: A0A6J1GDE2 (uncharacterized protein LOC111452966 OS=Cucurbita moschata OX=3662 GN=LOC111452966 PE=4 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 2.3e-70
Identity = 142/189 (75.13%), Postives = 159/189 (84.13%), Query Frame = 0


Query: 1   MADSETVRRQSPAIWKESGVQALNTIIQLHFEKTLEKKGAIDLQKKALQKLFQLFFLFLS 60
           MAD E   R  P+I  E+ +QALNT+IQLHFEKTLEKK AIDLQKK L  LF LFF+FL+
Sbjct: 1   MADLEAHTRPHPSISTETALQALNTLIQLHFEKTLEKKHAIDLQKKQLHNLFHLFFIFLA 60

Query: 61  LVFLALSLSPRLQCRHCWIPICLLSAAHLSFYLSLAQTLRCVNAFKYQRRCHKLTLGLAT 120
           L+FLA SLSPRLQCRHCWIPI LLS +HL+FY+S+AQTLRC+NAFKYQRRCHKLTLGLAT
Sbjct: 61  LIFLAQSLSPRLQCRHCWIPIALLSLSHLTFYVSVAQTLRCINAFKYQRRCHKLTLGLAT 120

Query: 121 QKLRDFNLRIS---GGGDGGGFDGEFDISYQEPPESYLGKFKRNWALYFAFLLFIYAFMI 180
           +KLR   +RIS   GG DGG  D EF+I YQEPPESYLGKFKRNWAL+F FL+FIY FMI
Sbjct: 121 EKLRLMKMRISTAGGGLDGGAADEEFEIHYQEPPESYLGKFKRNWALHFGFLIFIYGFMI 180

Query: 181 SSSVVLLCS 187
           SSSVVLLCS
Sbjct: 181 SSSVVLLCS 189

[Close]

BLAST of Sed0021560 vs. ExPASy TrEMBL
Match: A0A6J1IL37 (uncharacterized protein LOC111478021 OS=Cucurbita maxima OX=3661 GN=LOC111478021 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 5.1e-70
Identity = 141/189 (74.60%), Postives = 158/189 (83.60%), Query Frame = 0


Query: 1   MADSETVRRQSPAIWKESGVQALNTIIQLHFEKTLEKKGAIDLQKKALQKLFQLFFLFLS 60
           MAD E   R  P+I  E+ +QALNT+IQLHFEKTLEKK AIDLQKK L  LF LFF+FL+
Sbjct: 1   MADLEAHTRPHPSISTETALQALNTLIQLHFEKTLEKKHAIDLQKKXLHNLFHLFFIFLA 60

Query: 61  LVFLALSLSPRLQCRHCWIPICLLSAAHLSFYLSLAQTLRCVNAFKYQRRCHKLTLGLAT 120
           L+FLA SLSPRLQCRHCWIPI LLS +HL+FY+S+AQTLRC+NAFKYQRRCHKLTLGLAT
Sbjct: 61  LIFLAQSLSPRLQCRHCWIPIALLSLSHLTFYVSIAQTLRCINAFKYQRRCHKLTLGLAT 120

Query: 121 QKLRDFNLRISGGG---DGGGFDGEFDISYQEPPESYLGKFKRNWALYFAFLLFIYAFMI 180
           +KLR   +RIS  G   DGG  D EF+I YQEPPESYLGKFKRNWAL+F FL+FIY FMI
Sbjct: 121 EKLRLMKMRISTAGGVLDGGAADEEFEIHYQEPPESYLGKFKRNWALHFGFLIFIYGFMI 180

Query: 181 SSSVVLLCS 187
           SSSVVLLCS
Sbjct: 181 SSSVVLLCS 189

[Close]

BLAST of Sed0021560 vs. ExPASy TrEMBL
Match: A0A6J1BTW4 (uncharacterized protein LOC111005723 OS=Momordica charantia OX=3673 GN=LOC111005723 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 1.4e-67
Identity = 138/186 (74.19%), Postives = 154/186 (82.80%), Query Frame = 0


Query: 1   MADSETVRRQSPAIWKESGVQALNTIIQLHFEKTLEKKGAIDLQKKALQKLFQLFFLFLS 60
           MAD E+  RQ P+I+K++ +QALNTIIQLHFEKTLEKK AIDLQKK L  LFQLFF+FL 
Sbjct: 1   MADLESQPRQHPSIFKDTALQALNTIIQLHFEKTLEKKRAIDLQKKHLHNLFQLFFIFLG 60

Query: 61  LVFLALSLSPRLQCRHCWIPICLLSAAHLSFYLSLAQTLRCVNAFKYQRRCHKLTLGLAT 120
           L+FLA SLSPRLQCRH WIPI LLS +HLSFY+S+A TLRC+N FKYQRRCHKLTLGLAT
Sbjct: 61  LMFLAQSLSPRLQCRHSWIPISLLSVSHLSFYVSVAHTLRCINGFKYQRRCHKLTLGLAT 120

Query: 121 QKLRDFNLRISGGGDGGGFDGEFDISYQEPPESYLGKFKRNWALYFAFLLFIYAFMISSS 180
           QKLR+     S        D EF+I YQEPPESYLGKFKRNWAL+F FL+FIYAFMISSS
Sbjct: 121 QKLREIKTSSSAAD-----DDEFEIHYQEPPESYLGKFKRNWALHFGFLIFIYAFMISSS 180

Query: 181 VVLLCS 187
           VVLLCS
Sbjct: 181 VVLLCS 181

[Close]

BLAST of Sed0021560 vs. TAIR 10
Match: AT3G18800.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 12 growth stages; Has 58 Blast hits to 58 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 58; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 236.1 bits (601), Expect = 2.3e-62
Identity = 124/192 (64.58%), Postives = 145/192 (75.52%), Query Frame = 0


Query: 3   DSETVRRQSPAIWKESGVQALNTIIQLHFEKTLEKKGAIDLQKKALQKLFQLFFLFLSLV 62
           D E  +   P I KE+ +QALN+IIQLHFEKTLEKK AID QKK L KLFQLFF+FL+++
Sbjct: 5   DDEIDQNNQPFIPKETALQALNSIIQLHFEKTLEKKRAIDHQKKKLHKLFQLFFIFLAVI 64

Query: 63  FLALSL-SPRLQCRHCWIPICLLSAAHLSFYLSLAQTLRCVNAFKYQRRCHKLTLGLATQ 122
           F +LS  S RL CRHCW PICLLS +HL FY+S+AQTLRC+N FKYQRRCHKLTLGLAT 
Sbjct: 65  FFSLSQPSGRLHCRHCWAPICLLSFSHLFFYVSVAQTLRCINGFKYQRRCHKLTLGLATH 124

Query: 123 KLRDFNLRISGGGDGGGFDG--------EFDISYQEPPESYLGKFKRNWALYFAFLLFIY 182
           KLR    RI+ G   GG DG        + ++ YQEPP+SY GKFKRNWALYF FL+ +Y
Sbjct: 125 KLRFIKSRIAAGDFLGGGDGDEASAAAWDLEVPYQEPPDSYFGKFKRNWALYFGFLILLY 184

Query: 183 AFMISSSVVLLC 186
            FMIS SVV+LC
Sbjct: 185 TFMISFSVVILC 196

The following BLAST results are available for this feature:

BLAST of Sed0021560 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038883211.1	2.9e-72	75.00	uncharacterized protein LOC120074230 [Benincasa hispida]	[more]
XP_008441005.1	1.5e-71	75.26	PREDICTED: uncharacterized protein LOC103485248 [Cucumis melo]	[more]
XP_011657774.1	1.6e-70	74.21	uncharacterized protein LOC101206076 [Cucumis sativus]	[more]
XP_022949634.1	4.7e-70	75.13	uncharacterized protein LOC111452966 [Cucurbita moschata] >XP_023543401.1 unchar...	[more]
XP_022977846.1	1.0e-69	74.60	uncharacterized protein LOC111478021 [Cucurbita maxima]	[more]

BLAST of Sed0021560 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0021560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B333	7.1e-72	75.26	uncharacterized protein LOC103485248 OS=Cucumis melo OX=3656 GN=LOC103485248 PE=...	[more]
A0A0A0KKV5	7.8e-71	74.21	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G485130 PE=4 SV=1	[more]
A0A6J1GDE2	2.3e-70	75.13	uncharacterized protein LOC111452966 OS=Cucurbita moschata OX=3662 GN=LOC1114529...	[more]
A0A6J1IL37	5.1e-70	74.60	uncharacterized protein LOC111478021 OS=Cucurbita maxima OX=3661 GN=LOC111478021...	[more]
A0A6J1BTW4	1.4e-67	74.19	uncharacterized protein LOC111005723 OS=Momordica charantia OX=3673 GN=LOC111005...	[more]

BLAST of Sed0021560 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18800.1	2.3e-62	64.58	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36363	OS04G0687200 PROTEIN	coord: 6..185

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0021560.1	Sed0021560.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane