Sed0021542 (gene) Chayote v1

Overview


Name	Sed0021542
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Ribosomal protein L19
Location	LG09: 36726138 .. 36729155 (-)
RNA-Seq Expression	Sed0021542
Synteny	Sed0021542

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCCCATTAAAAAAAAATTGTCAGTTCTAAAACCCTAGAATGGCAGTTTCTCCTTCATAAGCTTATCCTGTCTGCAACTTAGGGCAAGCAAAAATGGTTTCCCTAAAGCTTCAGAAGAGGCTCGCGGCCAGCGTCCTCAAGTGCGGCAGGGGCAAGGTCTGGCTCGATCCCAATGAGGTCAACGAAATCTCCATGGCCAACTCTCGTACGCGTTCTTCATCTCTATCACCTTTGTTCAGATTCGATTGTTATTAGTGAAAATTGAAATCTGTAGGTTGTTGCTTGAATTTCCGCGGTTTTGATTTCACAATCTGAATATTGTTCTTAGACTTTGATTTCGGATCTGAAAATTCTGAAACTGTCGTTCCTTTATGTGTTTAATTTTTAACGTTTGTTGTACGATTTTGTGGCCATCGTTGCTTCTAATTGAACCTCGAGTTTAAACCCGGTACACCACTGGTTCATTGCTTGATAGTGGCACCGGGATACATTGTAGGCGGTATTTTAGGAAAGCGCAAGGCGCAATAGGGCTTTTTTACTTGAGGCGGACTATATGAAAAAACACAAAAAATTATATGTATGTGTGTATACACAATAAAAACACTTGAAATTGACATAAATGAAGCTTTAACCAAGAATAATATATAAAAAAATACATAATATTCAACTATCAACCTTCACGCGCTTCGGATGACCTAGTATGGGAATTTGAAATACAAAAAACGCAAATGAAAATTAAGAACCCCCTGAAGCGCATGCCTTTTGGCGCCCGGGGCTTCACGTAAGGCACCTTATTAAGGTGGAACTTGAGCCCCGGTGCTTGCCTAGGCACGCCTTTTAAAACACTGATTGTAGGACCGGAAGTAAAATTGGGATCACCGAGAAAAATTAATCCCACAGCAGCCTTGAACCCTCGACCTCAAAAGGAACAGACCCTCAAGGCCTGGGCGCTTGATCACTGCACAGCCCCTATTTTCTCAACTTGTAATTATTACAGAATCTATGGTGAATCATTTGCAGAAGAATGCTAGGAGAGGTTATCTTTGTACTGTATAAGAAATCGCAGTGACTAAACACACTTTTTTATTTGTTAGTGAAGTTTTGTTAAATATTCCTCTTAGAATCTTCACTCTAAGGGAATTGCACTTATTCCATGTACTTGGTTTAAGTTTTTGTTGTTTGAGGATTGTGGTCTTGAAGGTATGCTCCTTTGGAGGTCGATCAAAAAAAATACAAAATGTAACCCACCTTAGAGCGAGACAAAGACAACGTCCATATGGGTCTAGAACTTTGATAAGGTGAAATTAAACTAACGAAATGGCAGAAAAGCCGAATCACTAGCATTTTAGATAATGGGAAGTAGGAGATCCAAAGGTGGAAAACAAATGCCTCAAGAACAAGGACTGGGAAATGGAGAGAATTCCAGAAGGATAGCCCTAACGAAATTTTCACAAACAGTGTTCGTTGTTGCCCTATGTTCGAAACCTACTCTCGAACTTAATGGTAAAATCTCCTAGGACGTGTTTGGTGCAGTAAGTTATGTAGTGGATAGAAGCTCTAATTATTGGTTATCAAAATAAATATTCTTCCTAAGTATGCCACCCTCATTGTTTGTTGGACCAATGTTTATCCTTCATATGTGTGAATAAGATATATCAAATGTGCTTTTGTTCTACAAAATTTTAAAAATATTAAATTTGTGGTTGTGATAGTTTCATACTGATATTAATCATCTTATAGAACTGTTTGTGATTCTGCTGTTAATTAATATTTCAATTCTTGAGTACAGGCCAGAATGTAAGGAAGTTGGTGAAGGATGGTTTCATCATCAGGAAGCCAACCAAGATCCACTCCCGTTCTCGAGCACGCCGTATGAAGGAGGCCAAGAGAAAGGGTCGCCACTCCGGATATGGTATTGTTCTTCCAAAAACTTGATTTATATATATATGGATGCCATTGAAGAATGGCCTGCATGATTTTTAATCTTATTTCAGTACTTTTTATGCACATATCACACATTTTGTTCCCTTTTCATGACACCACAAACTTATAAAGATAAGGAGGCAACATTTTTGAATTTGTCACTAAAGTTTACATTCTTAACCTGTTTAGGTAAGCGTAAGGGTACCAGAGAGGCTAGGTTGCCAACCAAGATCCTCTGGATGCGGAGAATGCGTGTTCTCAGAAGATTGCTCCGCAAATACCGAGAATCTAAGAAGATTGACAAGCATATGTATCATGACATGTACATGAAAGTGAAGGGTAATGTCTTTAAGAACAAGCGCGTGCTCATGGAGAGCATCCACAAGTCGAAGGCCGAGAAGGCAAGAGAGAAGACATTGTCAGATCAATTCGAGGCTAAGAGGGCTAAGAACAAAGCCAGCAGGGAAAGAAAATTTGCTAGGAGAGAGGAACGATTGGCACAGGTTTCTTTCCTCCCCGTCCCTTAATTATTACCGATGCAATGTTCGTACCTATGATGCCATTGTAATTTGTATTCATTTTATTTCGTAGGGACCTGGAGAGAAACAGCCACCCGTGGCATCGGCAGCCCAACCTGCTGCTCCATCTACGCAGTAAGTATCAAAATCATGAAAACCTATGTAAATCTAGCTTCATTTTGCAATGCTAAGTATCTTTTCATTTCGTGTAGGGTGTTGAAGAAATCGAAGAAGTGAGAATTTTTACGAAAAGGAGCACGGTAGGAAGGTTTAAACTTCTTTTCTTGATGGTTCTTGTATCCCTATTATCCTAGACTAGGTTGGAGGAGCCTTTTGTTTACATTGAACCTTGTTACTTCATATTCAAGGATTAGCCTGGTGATTTTTGTTAGTTTATGTTATTATGGAATGGAATTTATTTGAGATTAAAGGCATATTGATTGATTTAGGGTGATCAGCTTTATGGTATGCATTTGCGGATTTTACGATTATTATCCCTTTAGCTGTATGGTATGCCAATCTTGCTTAGAACAAACCTGTAATCCAACACTGACAAATCTAGTTTGTGTTTCCGATCC

mRNA sequence

GCCCATTAAAAAAAAATTGTCAGTTCTAAAACCCTAGAATGGCAGTTTCTCCTTCATAAGCTTATCCTGTCTGCAACTTAGGGCAAGCAAAAATGGTTTCCCTAAAGCTTCAGAAGAGGCTCGCGGCCAGCGTCCTCAAGTGCGGCAGGGGCAAGGTCTGGCTCGATCCCAATGAGGTCAACGAAATCTCCATGGCCAACTCTCGCCAGAATGTAAGGAAGTTGGTGAAGGATGGTTTCATCATCAGGAAGCCAACCAAGATCCACTCCCGTTCTCGAGCACGCCGTATGAAGGAGGCCAAGAGAAAGGGTCGCCACTCCGGATATGGTAAGCGTAAGGGTACCAGAGAGGCTAGGTTGCCAACCAAGATCCTCTGGATGCGGAGAATGCGTGTTCTCAGAAGATTGCTCCGCAAATACCGAGAATCTAAGAAGATTGACAAGCATATGTATCATGACATGTACATGAAAGTGAAGGGTAATGTCTTTAAGAACAAGCGCGTGCTCATGGAGAGCATCCACAAGTCGAAGGCCGAGAAGGCAAGAGAGAAGACATTGTCAGATCAATTCGAGGCTAAGAGGGCTAAGAACAAAGCCAGCAGGGAAAGAAAATTTGCTAGGAGAGAGGAACGATTGGCACAGGGACCTGGAGAGAAACAGCCACCCGTGGCATCGGCAGCCCAACCTGCTGCTCCATCTACGCAGGTGTTGAAGAAATCGAAGAAGTGAGAATTTTTACGAAAAGGAGCACGGTAGGAAGGTTTAAACTTCTTTTCTTGATGGTTCTTGTATCCCTATTATCCTAGACTAGGTTGGAGGAGCCTTTTGTTTACATTGAACCTTGTTACTTCATATTCAAGGATTAGCCTGGTGATTTTTGTTAGTTTATGTTATTATGGAATGGAATTTATTTGAGATTAAAGGCATATTGATTGATTTAGGGTGATCAGCTTTATGGTATGCATTTGCGGATTTTACGATTATTATCCCTTTAGCTGTATGGTATGCCAATCTTGCTTAGAACAAACCTGTAATCCAACACTGACAAATCTAGTTTGTGTTTCCGATCC

Coding sequence (CDS)

ATGGTTTCCCTAAAGCTTCAGAAGAGGCTCGCGGCCAGCGTCCTCAAGTGCGGCAGGGGCAAGGTCTGGCTCGATCCCAATGAGGTCAACGAAATCTCCATGGCCAACTCTCGCCAGAATGTAAGGAAGTTGGTGAAGGATGGTTTCATCATCAGGAAGCCAACCAAGATCCACTCCCGTTCTCGAGCACGCCGTATGAAGGAGGCCAAGAGAAAGGGTCGCCACTCCGGATATGGTAAGCGTAAGGGTACCAGAGAGGCTAGGTTGCCAACCAAGATCCTCTGGATGCGGAGAATGCGTGTTCTCAGAAGATTGCTCCGCAAATACCGAGAATCTAAGAAGATTGACAAGCATATGTATCATGACATGTACATGAAAGTGAAGGGTAATGTCTTTAAGAACAAGCGCGTGCTCATGGAGAGCATCCACAAGTCGAAGGCCGAGAAGGCAAGAGAGAAGACATTGTCAGATCAATTCGAGGCTAAGAGGGCTAAGAACAAAGCCAGCAGGGAAAGAAAATTTGCTAGGAGAGAGGAACGATTGGCACAGGGACCTGGAGAGAAACAGCCACCCGTGGCATCGGCAGCCCAACCTGCTGCTCCATCTACGCAGGTGTTGAAGAAATCGAAGAAGTGA

Protein sequence

MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREERLAQGPGEKQPPVASAAQPAAPSTQVLKKSKK

Homology

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BLAST of Sed0021542 vs. NCBI nr
Match: XP_022959808.1 (60S ribosomal protein L19-1-like [Cucurbita moschata])

HSP 1 Score: 377.9 bits (969), Expect = 5.8e-101
Identity = 204/211 (96.68%), Postives = 208/211 (98.58%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCG+GKVWLDPNEVNEISMANSRQN+RKLVKDGF+IRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFVIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180

Query: 181 LAQGPGEKQPPVASAAQPAAPSTQVLKKSKK 212
           LAQGPGEKQPPV SAAQPAA STQ+ KKSKK
Sbjct: 181 LAQGPGEKQPPVTSAAQPAAQSTQLSKKSKK 211

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BLAST of Sed0021542 vs. NCBI nr
Match: XP_023004655.1 (60S ribosomal protein L19-1-like [Cucurbita maxima])

HSP 1 Score: 375.2 bits (962), Expect = 3.8e-100
Identity = 203/211 (96.21%), Postives = 206/211 (97.63%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCG+GKVWLDPNEVNEISMANSRQN+RKLVKDGF+IRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFVIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180

Query: 181 LAQGPGEKQPPVASAAQPAAPSTQVLKKSKK 212
           LAQGPGEKQPP  SAAQPAA STQ  KKSKK
Sbjct: 181 LAQGPGEKQPPATSAAQPAAQSTQQSKKSKK 211

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BLAST of Sed0021542 vs. NCBI nr
Match: XP_023514714.1 (60S ribosomal protein L19-1-like [Cucurbita pepo subsp. pepo] >KAG6593210.1 60S ribosomal protein L19-2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030210.1 60S ribosomal protein L19-2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 375.2 bits (962), Expect = 3.8e-100
Identity = 203/211 (96.21%), Postives = 206/211 (97.63%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCG+GKVWLDPNEVNEISMANSRQN+RKLVKDGF+IRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFVIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180

Query: 181 LAQGPGEKQPPVASAAQPAAPSTQVLKKSKK 212
           LAQGPGEKQPP  SAAQPAA STQ  KKSKK
Sbjct: 181 LAQGPGEKQPPATSAAQPAAQSTQPSKKSKK 211

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BLAST of Sed0021542 vs. NCBI nr
Match: XP_004136019.1 (60S ribosomal protein L19-1 [Cucumis sativus] >KAE8646346.1 hypothetical protein Csa_015693 [Cucumis sativus])

HSP 1 Score: 372.9 bits (956), Expect = 1.9e-99
Identity = 205/213 (96.24%), Postives = 207/213 (97.18%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQN+RKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKR+GTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180

Query: 181 LAQGPGEKQPPVASAAQPAA--PSTQVLKKSKK 212
           LAQGPGEKQPPV SAAQPAA   STQ  KKSKK
Sbjct: 181 LAQGPGEKQPPVTSAAQPAAASQSTQASKKSKK 213

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BLAST of Sed0021542 vs. NCBI nr
Match: XP_038896810.1 (60S ribosomal protein L19-1-like [Benincasa hispida])

HSP 1 Score: 370.5 bits (950), Expect = 9.3e-99
Identity = 204/213 (95.77%), Postives = 206/213 (96.71%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQN+RKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKR+GTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREER 180

Query: 181 LAQGPGEKQPPVASAAQPAA--PSTQVLKKSKK 212
           LAQGPGEKQPPV SAAQPAA   STQ  KKSKK
Sbjct: 181 LAQGPGEKQPPVTSAAQPAAASQSTQASKKSKK 213

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BLAST of Sed0021542 vs. ExPASy Swiss-Prot
Match: Q9SRX2 (60S ribosomal protein L19-1 OS=Arabidopsis thaliana OX=3702 GN=RPL19A PE=2 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 1.4e-89
Identity = 183/214 (85.51%), Postives = 196/214 (91.59%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASV+KCG+GKVWLDPNE ++ISMANSRQN+RKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVMKCGKGKVWLDPNESSDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRAR+MK AK KGRHSGYGKRKGTREARLPTK+LWMRRMRVLRRLL+KYRE+KKIDKHMY
Sbjct: 61  SRARKMKIAKMKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLKKYRETKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYM+VKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMRVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREER 180

Query: 181 LAQGPGEKQPPVAS---AAQPAAPSTQVLKKSKK 212
           LA+GPG    PVA+   AA PA  +    KKSKK
Sbjct: 181 LAKGPGGDVAPVAAPAPAATPAPTAAVPKKKSKK 214

[Close]

BLAST of Sed0021542 vs. ExPASy Swiss-Prot
Match: P49693 (60S ribosomal protein L19-3 OS=Arabidopsis thaliana OX=3702 GN=RPL19C PE=2 SV=3)

HSP 1 Score: 322.8 bits (826), Expect = 2.9e-87
Identity = 179/211 (84.83%), Postives = 193/211 (91.47%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLA+SVLKCG+ KVWLDPNE ++ISMANSRQN+RKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLASSVLKCGKRKVWLDPNEGSDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRAR++  AKRKGRHSGYGKRKGTREARLPTK+LWMRRMRVLRRLL+KYRE+KKID+HMY
Sbjct: 61  SRARQLNIAKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLKKYRETKKIDRHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREER 180

Query: 181 LAQGPGEKQPPVASAAQPAAPSTQVLKKSKK 212
           LA+GPG   P   +AA PA  +    KKSKK
Sbjct: 181 LAKGPGGDIP---AAAPPAQTAEVPAKKSKK 208

[Close]

BLAST of Sed0021542 vs. ExPASy Swiss-Prot
Match: Q9LUQ6 (60S ribosomal protein L19-2 OS=Arabidopsis thaliana OX=3702 GN=RPL19B PE=2 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 5.0e-87
Identity = 179/213 (84.04%), Postives = 188/213 (88.26%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR 60
           MVSLK+QKRLAASV+KCG+GKVWLDPNE  +ISMANSRQN+RKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKIQKRLAASVMKCGKGKVWLDPNESGDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRAR + EAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRR L KYRESKKID+HMY
Sbjct: 61  SRARALNEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRFLSKYRESKKIDRHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHK KAEKAREKTL+DQFEAKR KNKASRERKFARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKMKAEKAREKTLADQFEAKRIKNKASRERKFARREER 180

Query: 181 LAQGP--GEKQPPVASAAQPAAPSTQVLKKSKK 212
           LAQGP  GE   P  +  QP        KKSKK
Sbjct: 181 LAQGPGGGETTTPAGAPQQPEVTK----KKSKK 209

[Close]

BLAST of Sed0021542 vs. ExPASy Swiss-Prot
Match: P36241 (60S ribosomal protein L19 OS=Drosophila melanogaster OX=7227 GN=RpL19 PE=1 SV=2)

HSP 1 Score: 243.0 bits (619), Expect = 2.9e-63
Identity = 128/182 (70.33%), Postives = 153/182 (84.07%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR 60
           M SLKLQKRLAASVL+CG+ KVWLDPNE+NEI+  NSRQN+RKL+KDG II+KP  +HSR
Sbjct: 1   MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
            R R+  EA+RKGRH G+GKRKGT  AR+PTK+LWM+R RVLRRLL+KYR+SKKID+H+Y
Sbjct: 61  YRVRKNTEARRKGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HD+YMK KGNVFKNKRVLME IHK KAEK R K L+DQ EA+R K + +R+    RREER
Sbjct: 121 HDLYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREARK----RREER 178

Query: 181 LA 183
           +A
Sbjct: 181 IA 178

[Close]

BLAST of Sed0021542 vs. ExPASy Swiss-Prot
Match: Q3T0W9 (60S ribosomal protein L19 OS=Bos taurus OX=9913 GN=RPL19 PE=2 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 1.2e-61
Identity = 125/181 (69.06%), Postives = 151/181 (83.43%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR 60
           M  L+LQKRLA+SVL+CG+ KVWLDPNE NEI+ ANSRQ +RKL+KDG IIRKP  +HSR
Sbjct: 1   MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           +R R+   A+RKGRH G GKRKGT  AR+P K+ WMRRMR+LRRLLR+YRESKKID+HMY
Sbjct: 61  ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           H +Y+KVKGNVFKNKR+LME IHK KA+KAR+K L+DQ EA+R+K K +R+    RREER
Sbjct: 121 HSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARK----RREER 177

Query: 181 L 182
           L
Sbjct: 181 L 177

[Close]

BLAST of Sed0021542 vs. ExPASy TrEMBL
Match: A0A6J1H702 (Ribosomal protein L19 OS=Cucurbita moschata OX=3662 GN=LOC111460761 PE=3 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 2.8e-101
Identity = 204/211 (96.68%), Postives = 208/211 (98.58%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCG+GKVWLDPNEVNEISMANSRQN+RKLVKDGF+IRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFVIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180

Query: 181 LAQGPGEKQPPVASAAQPAAPSTQVLKKSKK 212
           LAQGPGEKQPPV SAAQPAA STQ+ KKSKK
Sbjct: 181 LAQGPGEKQPPVTSAAQPAAQSTQLSKKSKK 211

[Close]

BLAST of Sed0021542 vs. ExPASy TrEMBL
Match: A0A6J1KV74 (Ribosomal protein L19 OS=Cucurbita maxima OX=3661 GN=LOC111497884 PE=3 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 1.8e-100
Identity = 203/211 (96.21%), Postives = 206/211 (97.63%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCG+GKVWLDPNEVNEISMANSRQN+RKLVKDGF+IRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFVIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180

Query: 181 LAQGPGEKQPPVASAAQPAAPSTQVLKKSKK 212
           LAQGPGEKQPP  SAAQPAA STQ  KKSKK
Sbjct: 181 LAQGPGEKQPPATSAAQPAAQSTQQSKKSKK 211

[Close]

BLAST of Sed0021542 vs. ExPASy TrEMBL
Match: A0A5A7VS85 (Ribosomal protein L19 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G00750 PE=3 SV=1)

HSP 1 Score: 370.2 bits (949), Expect = 5.9e-99
Identity = 203/213 (95.31%), Postives = 206/213 (96.71%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQN+RKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKR+GTREARLPTK+LWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRRGTREARLPTKVLWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREER 180

Query: 181 LAQGPGEKQPPVASAAQPAA--PSTQVLKKSKK 212
           LAQGPGEKQPPV SAAQPAA   STQ  KKSKK
Sbjct: 181 LAQGPGEKQPPVTSAAQPAAVSQSTQASKKSKK 213

[Close]

BLAST of Sed0021542 vs. ExPASy TrEMBL
Match: A0A1S3BSJ2 (Ribosomal protein L19 OS=Cucumis melo OX=3656 GN=LOC103492800 PE=3 SV=1)

HSP 1 Score: 370.2 bits (949), Expect = 5.9e-99
Identity = 203/213 (95.31%), Postives = 206/213 (96.71%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQN+RKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKR+GTREARLPTK+LWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRRGTREARLPTKVLWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREER 180

Query: 181 LAQGPGEKQPPVASAAQPAA--PSTQVLKKSKK 212
           LAQGPGEKQPPV SAAQPAA   STQ  KKSKK
Sbjct: 181 LAQGPGEKQPPVTSAAQPAAVSQSTQASKKSKK 213

[Close]

BLAST of Sed0021542 vs. ExPASy TrEMBL
Match: A0A6J1DJQ5 (Ribosomal protein L19 OS=Momordica charantia OX=3673 GN=LOC111021109 PE=3 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 5.5e-97
Identity = 202/213 (94.84%), Postives = 203/213 (95.31%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCGRGKVWLDPNE NEISMANSRQN+RKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNECNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREER 180

Query: 181 LAQGPGEKQPPVASAAQPAA--PSTQVLKKSKK 212
           LAQGPGEKQ   ASAAQPAA   STQ  KKSKK
Sbjct: 181 LAQGPGEKQSSAASAAQPAAGSQSTQASKKSKK 213

[Close]

BLAST of Sed0021542 vs. TAIR 10
Match: AT1G02780.1 (Ribosomal protein L19e family protein )

HSP 1 Score: 330.5 bits (846), Expect = 1.0e-90
Identity = 183/214 (85.51%), Postives = 196/214 (91.59%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASV+KCG+GKVWLDPNE ++ISMANSRQN+RKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVMKCGKGKVWLDPNESSDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRAR+MK AK KGRHSGYGKRKGTREARLPTK+LWMRRMRVLRRLL+KYRE+KKIDKHMY
Sbjct: 61  SRARKMKIAKMKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLKKYRETKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYM+VKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMRVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREER 180

Query: 181 LAQGPGEKQPPVAS---AAQPAAPSTQVLKKSKK 212
           LA+GPG    PVA+   AA PA  +    KKSKK
Sbjct: 181 LAKGPGGDVAPVAAPAPAATPAPTAAVPKKKSKK 214

[Close]

BLAST of Sed0021542 vs. TAIR 10
Match: AT4G02230.1 (Ribosomal protein L19e family protein )

HSP 1 Score: 322.8 bits (826), Expect = 2.1e-88
Identity = 179/211 (84.83%), Postives = 193/211 (91.47%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLA+SVLKCG+ KVWLDPNE ++ISMANSRQN+RKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLASSVLKCGKRKVWLDPNEGSDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRAR++  AKRKGRHSGYGKRKGTREARLPTK+LWMRRMRVLRRLL+KYRE+KKID+HMY
Sbjct: 61  SRARQLNIAKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLKKYRETKKIDRHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREER 180

Query: 181 LAQGPGEKQPPVASAAQPAAPSTQVLKKSKK 212
           LA+GPG   P   +AA PA  +    KKSKK
Sbjct: 181 LAKGPGGDIP---AAAPPAQTAEVPAKKSKK 208

[Close]

BLAST of Sed0021542 vs. TAIR 10
Match: AT3G16780.1 (Ribosomal protein L19e family protein )

HSP 1 Score: 322.0 bits (824), Expect = 3.5e-88
Identity = 179/213 (84.04%), Postives = 188/213 (88.26%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR 60
           MVSLK+QKRLAASV+KCG+GKVWLDPNE  +ISMANSRQN+RKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKIQKRLAASVMKCGKGKVWLDPNESGDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRAR + EAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRR L KYRESKKID+HMY
Sbjct: 61  SRARALNEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRFLSKYRESKKIDRHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHK KAEKAREKTL+DQFEAKR KNKASRERKFARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKMKAEKAREKTLADQFEAKRIKNKASRERKFARREER 180

Query: 181 LAQGP--GEKQPPVASAAQPAAPSTQVLKKSKK 212
           LAQGP  GE   P  +  QP        KKSKK
Sbjct: 181 LAQGPGGGETTTPAGAPQQPEVTK----KKSKK 209

[Close]

BLAST of Sed0021542 vs. TAIR 10
Match: AT4G16030.1 (Ribosomal protein L19e family protein )

HSP 1 Score: 76.3 bits (186), Expect = 3.4e-14
Identity = 69/142 (48.59%), Postives = 82/142 (57.75%), Query Frame = 0


Query: 58  HSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDK 117
           HSRSRAR      RK RH+GYG  K T EA         RR+++L+RLL+K+  +KKIDK
Sbjct: 7   HSRSRAR------RKCRHTGYG--KDTMEALRRIMKRLTRRLKMLKRLLKKFCWNKKIDK 66

Query: 118 HM-YHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFAR 177
            + YHDM+MKVKG V+KNK VLMES+HKS                       SRERKF+ 
Sbjct: 67  LVYYHDMFMKVKGKVYKNKCVLMESMHKS-----------------------SRERKFSG 114

Query: 178 REERLAQGP-GEKQPPVASAAQ 198
            E RLA  P GEK    ASA Q
Sbjct: 127 SEMRLALEPEGEK---TASAPQ 114

The following BLAST results are available for this feature:

BLAST of Sed0021542 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022959808.1	5.8e-101	96.68	60S ribosomal protein L19-1-like [Cucurbita moschata]	[more]
XP_023004655.1	3.8e-100	96.21	60S ribosomal protein L19-1-like [Cucurbita maxima]	[more]
XP_023514714.1	3.8e-100	96.21	60S ribosomal protein L19-1-like [Cucurbita pepo subsp. pepo] >KAG6593210.1 60S ...	[more]
XP_004136019.1	1.9e-99	96.24	60S ribosomal protein L19-1 [Cucumis sativus] >KAE8646346.1 hypothetical protein...	[more]
XP_038896810.1	9.3e-99	95.77	60S ribosomal protein L19-1-like [Benincasa hispida]	[more]

BLAST of Sed0021542 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SRX2	1.4e-89	85.51	60S ribosomal protein L19-1 OS=Arabidopsis thaliana OX=3702 GN=RPL19A PE=2 SV=1	[more]
P49693	2.9e-87	84.83	60S ribosomal protein L19-3 OS=Arabidopsis thaliana OX=3702 GN=RPL19C PE=2 SV=3	[more]
Q9LUQ6	5.0e-87	84.04	60S ribosomal protein L19-2 OS=Arabidopsis thaliana OX=3702 GN=RPL19B PE=2 SV=1	[more]
P36241	2.9e-63	70.33	60S ribosomal protein L19 OS=Drosophila melanogaster OX=7227 GN=RpL19 PE=1 SV=2	[more]
Q3T0W9	1.2e-61	69.06	60S ribosomal protein L19 OS=Bos taurus OX=9913 GN=RPL19 PE=2 SV=1	[more]

BLAST of Sed0021542 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H702	2.8e-101	96.68	Ribosomal protein L19 OS=Cucurbita moschata OX=3662 GN=LOC111460761 PE=3 SV=1	[more]
A0A6J1KV74	1.8e-100	96.21	Ribosomal protein L19 OS=Cucurbita maxima OX=3661 GN=LOC111497884 PE=3 SV=1	[more]
A0A5A7VS85	5.9e-99	95.31	Ribosomal protein L19 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold41...	[more]
A0A1S3BSJ2	5.9e-99	95.31	Ribosomal protein L19 OS=Cucumis melo OX=3656 GN=LOC103492800 PE=3 SV=1	[more]
A0A6J1DJQ5	5.5e-97	94.84	Ribosomal protein L19 OS=Momordica charantia OX=3673 GN=LOC111021109 PE=3 SV=1	[more]

BLAST of Sed0021542 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G02780.1	1.0e-90	85.51	Ribosomal protein L19e family protein	[more]
AT4G02230.1	2.1e-88	84.83	Ribosomal protein L19e family protein	[more]
AT3G16780.1	3.5e-88	84.04	Ribosomal protein L19e family protein	[more]
AT4G16030.1	3.4e-14	48.59	Ribosomal protein L19e family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000196	Ribosomal protein L19/L19e	SMART	SM01416	Ribosomal_L19e_2	coord: 3..146 e-value: 7.3E-97 score: 337.8
IPR000196	Ribosomal protein L19/L19e	PFAM	PF01280	Ribosomal_L19e	coord: 4..145 e-value: 1.7E-64 score: 216.2
IPR000196	Ribosomal protein L19/L19e	HAMAP	MF_01475	Ribosomal_L19e	coord: 3..149 score: 20.592037
None	No IPR available	GENE3D	1.10.1200.240		coord: 57..189 e-value: 1.1E-58 score: 199.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 57..79
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 57..85
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 149..184
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 149..211
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 196..211
None	No IPR available	PANTHER	PTHR10722:SF26	RIBOSOMAL PROTEIN L19	coord: 1..211
IPR015972	Ribosomal protein L19/L19e, domain 1	GENE3D	1.10.1650.10		coord: 2..56 e-value: 2.3E-31 score: 109.4
IPR039547	60S ribosomal protein L19	PANTHER	PTHR10722	60S RIBOSOMAL PROTEIN L19	coord: 1..211
IPR023638	Ribosomal protein L19/L19e conserved site	PROSITE	PS00526	RIBOSOMAL_L19E	coord: 7..26
IPR033935	Ribosomal protein L19, eukaryotic	CDD	cd01417	Ribosomal_L19e_E	coord: 4..167 e-value: 5.05437E-76 score: 224.151
IPR035970	Ribosomal protein L19/L19e superfamily	SUPERFAMILY	48140	Ribosomal protein L19 (L19e)	coord: 3..144

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0021542.1	Sed0021542.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0004252	serine-type endopeptidase activity
molecular_function	GO:0003735	structural constituent of ribosome