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Sed0021519 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCTCAATAAAAAAAAATTCATTTACCTTTCCGTTCCAAATTCCTTCAAGCATGGGCCTCAACACACCGGAACGCGGCAGCTCCGTCCTGGCGTCGCCGAGGCGAGCGGCGGCGACCTTGCTCGTCTCTTTATCGACTCTGGTGGCGCTGTGTGCGAAACAAGCGAACAGAGCATCGAAGAAGCTCCAAACGAAACTGAAACTGAAGCAGTTGCCGCGATTAGAGGTCCGGCCGAAGAGTTTCATGAAGAGCATAAGCAGTACGGCGATGACGCTGATAACGAAGAAGAAGAACCACGGCGGCGCCGAAATAAAAGACGAGTGGGGAGACGACGGAGTGTGGCGGAAGACGATCTTGATGGGGGATAAGTGTGAGCCGTTGGATTTCTCGGGCGTAATTTACTACGATAGTAACGGAAAGCAGCTGAACGAAGTGCCTCCACGCTCGCCACGTGCCAGTCCCTTGCCTGCCTTGCTTGCAACCCGCCAGTATATATCTTAACGTTACCCGGCGGTGATTTCAGGTAGGTCACCCACGCGTGTGATTAGATGGGATGTGCGGCGTCGTTTTTATTTTGGCGGTGTTTTTCTTTTTTGCAAATTTCTATTTTTGTATAGTATTAAAGGTAAATTTTGTATGTCAAATATATATTTTGAAAGTAATCTTCGAAAATATTATGAATATGGATTTACTCAAAAAAAAAAAAAAAAGGTTATCAGTAAATAATTAGGTTCATACAACAAAATAAAACTTTACCAAACTATCATACTTTGGTAAGTTTTTTTTTTCCTAGGATCTATTTGTTTTTTAGACATGAGGAGTGGCACAACTCCTAAAAATCGTTGTTTATTTTTTTTGCAGTAAAT CCTCAATAAAAAAAAATTCATTTACCTTTCCGTTCCAAATTCCTTCAAGCATGGGCCTCAACACACCGGAACGCGGCAGCTCCGTCCTGGCGTCGCCGAGGCGAGCGGCGGCGACCTTGCTCGTCTCTTTATCGACTCTGGTGGCGCTGTGTGCGAAACAAGCGAACAGAGCATCGAAGAAGCTCCAAACGAAACTGAAACTGAAGCAGTTGCCGCGATTAGAGGTCCGGCCGAAGAGTTTCATGAAGAGCATAAGCAGTACGGCGATGACGCTGATAACGAAGAAGAAGAACCACGGCGGCGCCGAAATAAAAGACGAGTGGGGAGACGACGGAGTGTGGCGGAAGACGATCTTGATGGGGGATAAGTGTGAGCCGTTGGATTTCTCGGGCGTAATTTACTACGATAGTAACGGAAAGCAGCTGAACGAAGTGCCTCCACGCTCGCCACGTGCCAGTCCCTTGCCTGCCTTGCTTGCAACCCGCCAGTATATATCTTAACGTTACCCGGCGGTGATTTCAGGTAGGTCACCCACGCGTGTGATTAGATGGGATGTGCGGCGTCGTTTTTATTTTGGCGGTGTTTTTCTTTTTTGCAAATTTCTATTTTTGTATAGTATTAAAGGTAAATTTTGTATGTCAAATATATATTTTGAAAGTAATCTTCGAAAATATTATGAATATGGATTTACTCAAAAAAAAAAAAAAAAGGTTATCAGTAAATAATTAGGTTCATACAACAAAATAAAACTTTACCAAACTATCATACTTTGGTAAGTTTTTTTTTTCCTAGGATCTATTTGTTTTTTAGACATGAGGAGTGGCACAACTCCTAAAAATCGTTGTTTATTTTTTTTGCAGTAAAT ATGGGCCTCAACACACCGGAACGCGGCAGCTCCGTCCTGGCGTCGCCGAGGCGAGCGGCGGCGACCTTGCTCGTCTCTTTATCGACTCTGGTGGCGCTGTGTGCGAAACAAGCGAACAGAGCATCGAAGAAGCTCCAAACGAAACTGAAACTGAAGCAGTTGCCGCGATTAGAGGTCCGGCCGAAGAGTTTCATGAAGAGCATAAGCAGTACGGCGATGACGCTGATAACGAAGAAGAAGAACCACGGCGGCGCCGAAATAAAAGACGAGTGGGGAGACGACGGAGTGTGGCGGAAGACGATCTTGATGGGGGATAAGTGTGAGCCGTTGGATTTCTCGGGCGTAATTTACTACGATAGTAACGGAAAGCAGCTGAACGAAGTGCCTCCACGCTCGCCACGTGCCAGTCCCTTGCCTGCCTTGCTTGCAACCCGCCAGTATATATCTTAA MGLNTPERGSSVLASPRRAAATLLVSLSTLVALCAKQANRASKKLQTKLKLKQLPRLEVRPKSFMKSISSTAMTLITKKKNHGGAEIKDEWGDDGVWRKTILMGDKCEPLDFSGVIYYDSNGKQLNEVPPRSPRASPLPALLATRQYIS Homology
BLAST of Sed0021519 vs. NCBI nr
Match: XP_038894891.1 (uncharacterized protein LOC120083287 [Benincasa hispida]) HSP 1 Score: 220.7 bits (561), Expect = 8.4e-54 Identity = 121/163 (74.23%), Postives = 132/163 (80.98%), Query Frame = 0
BLAST of Sed0021519 vs. NCBI nr
Match: XP_008456286.1 (PREDICTED: uncharacterized protein LOC103496246 [Cucumis melo] >TYJ98977.1 uncharacterized protein E5676_scaffold248G001800 [Cucumis melo var. makuwa]) HSP 1 Score: 214.5 bits (545), Expect = 6.0e-52 Identity = 119/159 (74.84%), Postives = 130/159 (81.76%), Query Frame = 0
BLAST of Sed0021519 vs. NCBI nr
Match: XP_022137455.1 (uncharacterized protein LOC111008895 [Momordica charantia]) HSP 1 Score: 211.8 bits (538), Expect = 3.9e-51 Identity = 115/159 (72.33%), Postives = 127/159 (79.87%), Query Frame = 0
BLAST of Sed0021519 vs. NCBI nr
Match: XP_023519722.1 (uncharacterized protein LOC111783076 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 205.7 bits (522), Expect = 2.8e-49 Identity = 113/150 (75.33%), Postives = 123/150 (82.00%), Query Frame = 0
BLAST of Sed0021519 vs. NCBI nr
Match: XP_023001364.1 (uncharacterized protein LOC111495524 [Cucurbita maxima]) HSP 1 Score: 205.7 bits (522), Expect = 2.8e-49 Identity = 112/144 (77.78%), Postives = 121/144 (84.03%), Query Frame = 0
BLAST of Sed0021519 vs. ExPASy TrEMBL
Match: A0A5D3BIM5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G001800 PE=4 SV=1) HSP 1 Score: 214.5 bits (545), Expect = 2.9e-52 Identity = 119/159 (74.84%), Postives = 130/159 (81.76%), Query Frame = 0
BLAST of Sed0021519 vs. ExPASy TrEMBL
Match: A0A1S3C2V4 (uncharacterized protein LOC103496246 OS=Cucumis melo OX=3656 GN=LOC103496246 PE=4 SV=1) HSP 1 Score: 214.5 bits (545), Expect = 2.9e-52 Identity = 119/159 (74.84%), Postives = 130/159 (81.76%), Query Frame = 0
BLAST of Sed0021519 vs. ExPASy TrEMBL
Match: A0A6J1C6P8 (uncharacterized protein LOC111008895 OS=Momordica charantia OX=3673 GN=LOC111008895 PE=4 SV=1) HSP 1 Score: 211.8 bits (538), Expect = 1.9e-51 Identity = 115/159 (72.33%), Postives = 127/159 (79.87%), Query Frame = 0
BLAST of Sed0021519 vs. ExPASy TrEMBL
Match: A0A6J1KMI5 (uncharacterized protein LOC111495524 OS=Cucurbita maxima OX=3661 GN=LOC111495524 PE=4 SV=1) HSP 1 Score: 205.7 bits (522), Expect = 1.4e-49 Identity = 112/144 (77.78%), Postives = 121/144 (84.03%), Query Frame = 0
BLAST of Sed0021519 vs. ExPASy TrEMBL
Match: A0A6J1EAJ9 (uncharacterized protein LOC111431388 OS=Cucurbita moschata OX=3662 GN=LOC111431388 PE=4 SV=1) HSP 1 Score: 205.3 bits (521), Expect = 1.8e-49 Identity = 113/150 (75.33%), Postives = 123/150 (82.00%), Query Frame = 0
BLAST of Sed0021519 vs. TAIR 10
Match: AT1G49000.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: stem; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G18560.1); Has 105 Blast hits to 105 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 105; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 109.8 bits (273), Expect = 2.0e-24 Identity = 69/157 (43.95%), Postives = 93/157 (59.24%), Query Frame = 0
BLAST of Sed0021519 vs. TAIR 10
Match: AT3G18560.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G49000.1); Has 95 Blast hits to 95 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 95; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 96.7 bits (239), Expect = 1.7e-20 Identity = 71/191 (37.17%), Postives = 98/191 (51.31%), Query Frame = 0
BLAST of Sed0021519 vs. TAIR 10
Match: AT1G71740.1 (unknown protein; Has 82 Blast hits to 82 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 45.1 bits (105), Expect = 5.9e-05 Identity = 21/43 (48.84%), Postives = 29/43 (67.44%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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