Sed0021504 (gene) Chayote v1

Overview


Name	Sed0021504
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Peptidyl-tRNA hydrolase
Location	LG01: 12448559 .. 12453743 (-)
RNA-Seq Expression	Sed0021504
Synteny	Sed0021504

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAGAAACTGATAAATTAGGTTAAATCAATTTTTTTCTTTTGTTCCCGCCAATTGTAACCTAAAATCCTCAATCAACAAAACTGGCCGCCTCTGGTTTTCTTCATCTTCATCTCTACCCGCCATTGTTGTCTCTTTCACCAATCCTTTCAGGTTCTTCCCCTTTCGGATTCAATCTCCAAGTTCATACCAATCCATCGGCGAAACACCGCACGAAATATGAATATTGGTGCTTCCATATCTTCACTCTCCGCCCCGCGCCTTCCCGTTCGTCTCCATTGCTTTCGAATCTCCAAAACCCTAATTTCCTTTGCTTCTTTACCCTTCCTAAATTCTGCAAGTTCGCGTATCTTTTCGTCAATGGCTTCTTCCATTACGGCGGCGTCGATGCCCAGTTCAGAGCCGATGACTACGGATCAATTGGCTGTGGATGACAAGAAGCCCGCCCCACCGCCGCCGAAGCCATGGCTCATCGTCGGCCTTGGGAATCCCGGGAAGTTGTTTGATCGCACGCGCCATAATGTCCGTATGGTCCTATCTCTGCGTATTTCAATTGTCATTTGTTCTTTGTTCTTTTTAGATCATGCGCGAAGGATTTTTCATTTCAAGTATTTCTGTGGGGAGTTAGTTTCTGTTTTATTGAGAGCTTTGTTGATTTTTTTTTTCTTTCAATTTGTATTGATGAAGATGAAAGTATTACAGAGGTTTGGGCTAGAATCTAAGTTTTTTTTACAATGGGATCATTTGGTAAATACAAATCTGATACTCTTAAGGAGTTGGACATCAAACTTAAGGTCATAATAAGATAGGGCTTGCATATTCGAGGGTTTATCTCATGAATCAGTTACACATACGGGAGGAGAGCTCGTATGCCAAGGAAATTCCATTGGAACTGGCTCAGACGAAAGAGGGAAGGCAATTACTCGTCCCAAGTCGGTGCTAGAGGTGGACAGTATGGAGAATAACCGCAGCTCATCATCAATCTAATCACCGATGGAGTACGGATCACACAATCTTGACGATGGAGCAATGACTGTTCCATCCTAAGCGATAAGAGGATGAACAGAAAATCTCGCCAGAAAGATGAGCTAAGCAACGAACTCACACAGATCTCCTGCACTCCGGGATTAGTGTTCTATAATCAGTCAGCTCCCATGTAGAGAGCTGTGTTGATTGAGAAGATTATGTCATATTTTCTGTTTGCTTAACTGGGTATGCCGTATATTGTGTGGGCCGTGGGCAACCCTTTAGGAATGTTTCCCGAGCATGAACTTATGGTTGAAATTATGCTTTATGTTGATTTGTAAAGCTGTAGAATGATATTATATTTATTGATATTTTTGTTATTAGCCACATCCAGTGTTATCTGGATCCCCTTTACGAAGATGAATTGAAGCACTAGCAGTACCTAATGCTATGATTAAACTTCCAGGTTGGTTTTGAGATGGTGGATTCTGTAGCTGAAGCTGAAGGGATATCCATGAGTAGTGTTTCCTTCAAAGCTCAGATCGGGAAAGGTTTGTTATTTTTTAACGAACCTGTTTTTGCCTTCATCTTTTTGACAATTCTTGACAGTTGTTGAATTAAAATCTCGTTACAACTTAGCAGTACATCTAGCTGCTAGTTTGCCTGCCTTGAACTAACTTGCTGGTAGATTACTGATTCCTTTATTTCCACTTTGAAAGTGTGTAAAATCTTTTTCTTTGTCTTTGTAATGAGATGATTCGACCATGAACCATAATTTGGCAAAATAACAATTAGGTTGCATGTAACCAGACTCATATTTTGACATTCTACTATTTGTGCATTCTCAATCCTTAATAAGCAATATTTGTGATTGACATTTTACGGGATTCTAACTACTCCTAGGATGGTAATTGATGCCTTATCTATTGAGGTATGCTCAGATTGGCATCTTACAAGATATTAATGGCTCAAGAGGTGTTTGACTGCATATTTGAATTCTTAGCATTTTTTTTTATCTCTTATCCAAAAAGATATATATTTTTTTATTGATGGGTGTCTTGACCAATTTGCATGTACCTCAACTTTTTTCTGATAAGTGCATAACCCTATTATATATGTGATAGAATCCAAACATATTGAAATATAAAGGATAATGAAATTACAATATACCTCCCAAGTATTCAAGGTATTTGAAACCTCCACTCTTTACATATCACTCAGCATTGAAGACACTAAACAATACTTTTTCACTCATAAAAAAAACAATACTTTTTTTTTTGAAACAAGGGTACCACGCCCGTCCCTAGGCCAGGCACCGGGAGACATCGAAAGGGAAATGTCACAGCTGAGTCTCGAACCTGGAACCTTGAGGGGAGCATACCCTCAAAGCCCAAGTCTTCAACCACTGTGCTACTCCTTGGGGACATCAAAAAAACAATACTAAACAAATGCATGCCTTCATATCTCTCCTCTAACTCTATTTATAACCAATCTACACTGACAACTTACCTAATCCTTCATTCACCTTTTAATACCTAATAATATTTCACTTCTATCTTAATTGAAATCCTATCAGTTTGGTTGGGTAGCAAACTCCTAGGATATTAAATTTTTTGTGGTGACACCATGGTCTGAACCCATTATATTTATACCTTTTATTATTTACATTAGCTCTTATCAACCACTAGACCAATCCATGATTTTTTTAATTAAATTTTTATGATGATTATTTGTTGTAATGCAAATAAAATACCAAGGAAAACCGAATGTTTCTTTCCCTAAAAATGAGTTATTGTCTAGGAAAAGAAAAAACATTGGGGAAGGGGATATGATCATGTCCAGCAGGAGATTATTAAAATAGTGAAGATTATCAAATTTACCTGTATTTCAGGTTTCATCGGGAATGTTCCTGTAATGCTAGTCAAGCCACAAACCTTCATGAATGCAAGTGGCGTGTCTGTAAGTAAGCCATCTCAAGGATCTTCATCCATTTTAATTATTAGGTTTACCCTTTGTTCTTAATGATTGATTTGTTATGCATTTAACCTTTAATTGCAGGTTGGTGCTATTGTTTCCTACCATAAAATTCCATTGAATCAAGTCCTTGTGGTAAATACTTTAATCCCCATGATCGGTATTCTTGACAAGAGAGGAGGTTGGGATGTGGGGTGGGTATCTGTTTGATTCACTTTTTTCCCTACATCTAAGCCATGAATTGGGGTCCAAACCACAGATATTCGATGACTTAGATTTGCCATTTGCCAAATTGCGGATGCTGCCAAAGGGTGGGCATGGAGGACATAATGGGTAATTGTCTTTTTTTTGTTTTTTGGGATTACTATTACTTTTCAGTTTAATACTTAATTCTGGGTGTCTGTCTTTTTTTTTTTTTTTTTTTTAAGAATAGTAGGTGTCTGTCTTCTGATTTTTGTGGCATTCATTTTCTAATATCCTTAATACTAGGAGGTGCAGTGGTTGGTTTCATATAATTTCTTCAGGGTCATGCTTCATACCTCCTGCCTTTTTACTTGTCTTTATAAATATATATTATGTATTTATTAATAGGAGTTGTGCATTCATTAACTTTAAAATTGAGCTGCTAATAAAAGTGTGATAGAGTGAGGAAGATGTGATTTTCTTCATGATGAAAGGTTTCTGTGTGAGTTTCAGACAATCTACTTCAAGAATGCTGGTATCTATTTTTTATTTTAATCTGTGAGGCAACACCGCATGTGTTGTCCATCAGAAGAAAAAAAGAAGCATATTCCATTTTATTGGATTTGTGGTTGAAAGGTTGTGTTTTTGCAGAATTTGTCCCACAAGGAAAAGTACTTTCTTTTAATATGATCTTTTACTTGAAAAGTTTTGACCGCAAAAAGTTTTCGCTCTATAGAAAAGTATTCTTTCTTCAGATCTGAATGCTAATTTTCTACTTTTGAGTTTTGCAGCTTTATGAGGATAAAAAATAAAATTTAATTGGGTTGGCCGAGTAATAGTAAATGTAAAGATTGTACAAAGATTGAAAGATATCATGCGCCTGATCAAATCATTTAAGCTCTGCTCAGTACAAGGATCTAGGAATATGAGATTTTATTGTATGATTTACTTTGTAAATAGAATAAACATTATGAACTATGAAGCCAAGGAGAGTAATAACTCAACCAGAATAAATGTGTGCCCATAGCTAAGAGGTTATTAGTTCAAATCAGTTATTATATGCTGACCTTGTAGTCTAAGAGGACCTTGATATTCTAAAATATTATAGATTCAGTTCAAGATGGTCACCTATTTAAGATTTTTTTTTTTTTTTTGATGGATTTCTTTGACACCCTAATGTAGGGTAAGTCGGTCTATTTCATGAGAATAGTTCAAATCTTCCACCTCCCTCTCTTGTTGAACTAAAAAAAACATCAAGAAGAGCAAACTACATAGAAGTGCAACTTTTAATTTGCTTATTTGCTATCTGTGGCAGGATGAGGAGTATTATTGATCATTTGAAAGGCAGTCGCGATTTCCCTCGATTAAGAATAGGTAGGTCCCTCAAGGCTCTGACTGATGATTCTATGCAAATTCAGATGTTAAATGGGTGAAAATTTTTTAGGCATTGGGCGCCCTCCCGGGAAAATGGATGCTGCGAACTTTGTCATGCGATCCTTCAGCAAACAAGAACGAGAAGAGGTGTGTACAACGCTATCACATTTTCACAAAATCAAGCTTGATGTTAATCTAACTCTGTCTTAACCATTCAAGTGAAACTCTTTTTCAGTTGGATTTTACATTGCGAGTTGGCGTAGACGCTATACGGATTCTTTTGCTCGAGGGGTTTAACAAAAGTGCAACCTTTGTCAACACCAACAAACCTCTGGAACAAATAGGTTGAAATTGTTCATTATATAAGCCTTTTTATCTACCCTAAAAGGACTCCATTTTGTTTACTGTACCAAACTGTTTTTTACACTGGCGGCATTCGCTACAGTTTTAACCACCAATTTTGAAGCTTTGGATAGGATTATTGGAGAGGAAGAAGTATTGCAGCAAAGCAACAGACAAGACGATCAATGTCTAGGATTTGAAACCCCATCAATGGTAATCACATTGCCTCTCTTGTTGATGCCTCTCTCTTTCCTTTTAGATCGAAATCTTTTTAACATAAAGTTGTGATCTTTATAACATTTTGGTCAGCAAAGATTAGACATTTGTATGGCCCTTAGTTTGCATGGC

mRNA sequence

GAAGAAACTGATAAATTAGGTTAAATCAATTTTTTTCTTTTGTTCCCGCCAATTGTAACCTAAAATCCTCAATCAACAAAACTGGCCGCCTCTGGTTTTCTTCATCTTCATCTCTACCCGCCATTGTTGTCTCTTTCACCAATCCTTTCAGGTTCTTCCCCTTTCGGATTCAATCTCCAAGTTCATACCAATCCATCGGCGAAACACCGCACGAAATATGAATATTGGTGCTTCCATATCTTCACTCTCCGCCCCGCGCCTTCCCGTTCGTCTCCATTGCTTTCGAATCTCCAAAACCCTAATTTCCTTTGCTTCTTTACCCTTCCTAAATTCTGCAAGTTCGCGTATCTTTTCGTCAATGGCTTCTTCCATTACGGCGGCGTCGATGCCCAGTTCAGAGCCGATGACTACGGATCAATTGGCTGTGGATGACAAGAAGCCCGCCCCACCGCCGCCGAAGCCATGGCTCATCGTCGGCCTTGGGAATCCCGGGAAGTTGTTTGATCGCACGCGCCATAATGTTGGTTTTGAGATGGTGGATTCTGTAGCTGAAGCTGAAGGGATATCCATGAGTAGTGTTTCCTTCAAAGCTCAGATCGGGAAAGGTTTCATCGGGAATGTTCCTGTAATGCTAGTCAAGCCACAAACCTTCATGAATGCAAGTGGCGTGTCTGTTGGTGCTATTGTTTCCTACCATAAAATTCCATTGAATCAAGTCCTTGTGATATTCGATGACTTAGATTTGCCATTTGCCAAATTGCGGATGCTGCCAAAGGGTGGGCATGGAGGACATAATGGGATGAGGAGTATTATTGATCATTTGAAAGGCAGTCGCGATTTCCCTCGATTAAGAATAGGCATTGGGCGCCCTCCCGGGAAAATGGATGCTGCGAACTTTGTCATGCGATCCTTCAGCAAACAAGAACGAGAAGAGTTGGATTTTACATTGCGAGTTGGCGTAGACGCTATACGGATTCTTTTGCTCGAGGGGTTTAACAAAAGTGCAACCTTTGTCAACACCAACAAACCTCTGGAACAAATAGGTTGAAATTGTTCATTATATAAGCCTTTTTATCTACCCTAAAAGGACTCCATTTTGTTTACTGTACCAAACTGTTTTTTACACTGGCGGCATTCGCTACAGTTTTAACCACCAATTTTGAAGCTTTGGATAGGATTATTGGAGAGGAAGAAGTATTGCAGCAAAGCAACAGACAAGACGATCAATGTCTAGGATTTGAAACCCCATCAATGGTAATCACATTGCCTCTCTTGTTGATGCCTCTCTCTTTCCTTTTAGATCGAAATCTTTTTAACATAAAGTTGTGATCTTTATAACATTTTGGTCAGCAAAGATTAGACATTTGTATGGCCCTTAGTTTGCATGGC

Coding sequence (CDS)

ATGAATATTGGTGCTTCCATATCTTCACTCTCCGCCCCGCGCCTTCCCGTTCGTCTCCATTGCTTTCGAATCTCCAAAACCCTAATTTCCTTTGCTTCTTTACCCTTCCTAAATTCTGCAAGTTCGCGTATCTTTTCGTCAATGGCTTCTTCCATTACGGCGGCGTCGATGCCCAGTTCAGAGCCGATGACTACGGATCAATTGGCTGTGGATGACAAGAAGCCCGCCCCACCGCCGCCGAAGCCATGGCTCATCGTCGGCCTTGGGAATCCCGGGAAGTTGTTTGATCGCACGCGCCATAATGTTGGTTTTGAGATGGTGGATTCTGTAGCTGAAGCTGAAGGGATATCCATGAGTAGTGTTTCCTTCAAAGCTCAGATCGGGAAAGGTTTCATCGGGAATGTTCCTGTAATGCTAGTCAAGCCACAAACCTTCATGAATGCAAGTGGCGTGTCTGTTGGTGCTATTGTTTCCTACCATAAAATTCCATTGAATCAAGTCCTTGTGATATTCGATGACTTAGATTTGCCATTTGCCAAATTGCGGATGCTGCCAAAGGGTGGGCATGGAGGACATAATGGGATGAGGAGTATTATTGATCATTTGAAAGGCAGTCGCGATTTCCCTCGATTAAGAATAGGCATTGGGCGCCCTCCCGGGAAAATGGATGCTGCGAACTTTGTCATGCGATCCTTCAGCAAACAAGAACGAGAAGAGTTGGATTTTACATTGCGAGTTGGCGTAGACGCTATACGGATTCTTTTGCTCGAGGGGTTTAACAAAAGTGCAACCTTTGTCAACACCAACAAACCTCTGGAACAAATAGGTTGA

Protein sequence

MNIGASISSLSAPRLPVRLHCFRISKTLISFASLPFLNSASSRIFSSMASSITAASMPSSEPMTTDQLAVDDKKPAPPPPKPWLIVGLGNPGKLFDRTRHNVGFEMVDSVAEAEGISMSSVSFKAQIGKGFIGNVPVMLVKPQTFMNASGVSVGAIVSYHKIPLNQVLVIFDDLDLPFAKLRMLPKGGHGGHNGMRSIIDHLKGSRDFPRLRIGIGRPPGKMDAANFVMRSFSKQEREELDFTLRVGVDAIRILLLEGFNKSATFVNTNKPLEQIG

Homology

[Close]

BLAST of Sed0021504 vs. NCBI nr
Match: XP_038893864.1 (peptidyl-tRNA hydrolase, mitochondrial isoform X1 [Benincasa hispida] >XP_038893865.1 peptidyl-tRNA hydrolase, mitochondrial isoform X1 [Benincasa hispida] >XP_038893866.1 peptidyl-tRNA hydrolase, mitochondrial isoform X1 [Benincasa hispida])

HSP 1 Score: 460.7 bits (1184), Expect = 9.0e-126
Identity = 236/275 (85.82%), Postives = 251/275 (91.27%), Query Frame = 0


Query: 1   MNIGASISSLSAPRLPVRLHCFRISKTLISFASLPFLNSASSRIFSSMASSITAASMPSS 60
           MN+G+SISS++A RLP+ LHCFR SKTLISF SL FLNS +S IFSSM SS   ASM +S
Sbjct: 1   MNVGSSISSVTALRLPICLHCFRTSKTLISFPSLSFLNSGTSHIFSSMTSSSITASMSTS 60

Query: 61  EPMTTDQLAVDDKKPAPPPPKPWLIVGLGNPGKLFDRTRHNVGFEMVDSVAEAEGISMSS 120
              TTDQL VDDKKPA PPPKPWLIVGLGNPGK +DRTRHNVGFEMVD+VAEAEGISMSS
Sbjct: 61  SSPTTDQLPVDDKKPA-PPPKPWLIVGLGNPGKKYDRTRHNVGFEMVDTVAEAEGISMSS 120

Query: 121 VSFKAQIGKGFIGNVPVMLVKPQTFMNASGVSVGAIVSYHKIPLNQVLVIFDDLDLPFAK 180
           VSFKA IGKGFIG+VPVML KPQTFMNASG SVGAIVSY+KIPL QVLVIFDDLDLPFAK
Sbjct: 121 VSFKALIGKGFIGDVPVMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDLDLPFAK 180

Query: 181 LRMLPKGGHGGHNGMRSIIDHLKGSRDFPRLRIGIGRPPGKMDAANFVMRSFSKQEREEL 240
           LRMLPKGGHGGHNGMRSIIDHLKGSRDFPRLRIGIGRPPGKMDAANFV+R F+KQEREEL
Sbjct: 181 LRMLPKGGHGGHNGMRSIIDHLKGSRDFPRLRIGIGRPPGKMDAANFVLRPFNKQEREEL 240

Query: 241 DFTLRVGVDAIRILLLEGFNKSATFVNTNKPLEQI 276
           +FTL+VG DAIRILLLEGFNKSATFVNTNKPLEQI
Sbjct: 241 NFTLQVGTDAIRILLLEGFNKSATFVNTNKPLEQI 274

[Close]

BLAST of Sed0021504 vs. NCBI nr
Match: XP_022994507.1 (peptidyl-tRNA hydrolase, mitochondrial isoform X1 [Cucurbita maxima])

HSP 1 Score: 441.0 bits (1133), Expect = 7.4e-120
Identity = 230/276 (83.33%), Postives = 247/276 (89.49%), Query Frame = 0


Query: 1   MNIGASISSLSAPRLPVRLHCFRISKTLISFASLPFLNSASSRIFSSMASSITAASMPSS 60
           MNI AS+SSL+A RLP+ LHCF   +T ISF SL  LN  S  IFSSM SSIT ASM +S
Sbjct: 1   MNIAASLSSLAALRLPICLHCFPTFRTPISFPSLS-LNPPSLHIFSSMTSSIT-ASMSTS 60

Query: 61  EPMTTDQLAVDDKKPAPPPPKPWLIVGLGNPGKLFDRTRHNVGFEMVDSVAEAEGISMSS 120
            P+  DQLAV++KKPA PPPKPWLIVGLGNPGK ++RTRHNVGFEM+D+VAE EGISMSS
Sbjct: 61  SPLAPDQLAVEEKKPA-PPPKPWLIVGLGNPGKKYERTRHNVGFEMLDAVAEVEGISMSS 120

Query: 121 VSFKAQIGKGFIGNVPVMLVKPQTFMNASGVSVGAIVSYHKIPLNQVLVIFDDLDLPFAK 180
            SFKA IGKGFIG+VPVML KPQTFMNASG SVGAIVSY+KIPL QVLVIFDDLDLPFAK
Sbjct: 121 ASFKALIGKGFIGDVPVMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDLDLPFAK 180

Query: 181 LRMLPKGGHGGHNGMRSIIDHLKGSRDFPRLRIGIGRPPGKMDAANFVMRSFSKQEREEL 240
           LRMLPKGGHGGHNGMRSIIDHLKGSRDFPRLRIGIGRPPGKMDAANFVMR F+KQEREEL
Sbjct: 181 LRMLPKGGHGGHNGMRSIIDHLKGSRDFPRLRIGIGRPPGKMDAANFVMRPFNKQEREEL 240

Query: 241 DFTLRVGVDAIRILLLEGFNKSATFVNTNKPLEQIG 277
           DFT++VGVDAIRILLLEGFNKSATFVNTNKPLEQIG
Sbjct: 241 DFTMQVGVDAIRILLLEGFNKSATFVNTNKPLEQIG 273

[Close]

BLAST of Sed0021504 vs. NCBI nr
Match: XP_008457243.1 (PREDICTED: peptidyl-tRNA hydrolase, chloroplastic [Cucumis melo])

HSP 1 Score: 439.5 bits (1129), Expect = 2.1e-119
Identity = 228/275 (82.91%), Postives = 247/275 (89.82%), Query Frame = 0


Query: 1   MNIGASISSLSAPRLPVRLHCFRISKTLISFASLPFLNSASSRIFSSMASSITAASMPSS 60
           MNIGASISS++A RLP  +H FR S+TLISF SL  L+S +   FSS+ SSITA+   SS
Sbjct: 1   MNIGASISSVAALRLPFSIHSFRTSRTLISFPSLSLLHSPTFHNFSSITSSITASMSTSS 60

Query: 61  EPMTTDQLAVDDKKPAPPPPKPWLIVGLGNPGKLFDRTRHNVGFEMVDSVAEAEGISMSS 120
            P TTDQ A+DDKKPA PPPKPWLIVGLGNPGK +DRTRHNVGFEMVD+VAEAEGIS+S+
Sbjct: 61  SP-TTDQPALDDKKPA-PPPKPWLIVGLGNPGKKYDRTRHNVGFEMVDAVAEAEGISISN 120

Query: 121 VSFKAQIGKGFIGNVPVMLVKPQTFMNASGVSVGAIVSYHKIPLNQVLVIFDDLDLPFAK 180
           VSFKA IGKGFIG+VPVML KPQTFMNASG SVGAIVSY+KIPL QVLVIFDDLDLPFAK
Sbjct: 121 VSFKALIGKGFIGDVPVMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDLDLPFAK 180

Query: 181 LRMLPKGGHGGHNGMRSIIDHLKGSRDFPRLRIGIGRPPGKMDAANFVMRSFSKQEREEL 240
           LRMLPKGGHGGHNGMRSIIDH KGSRDFPRLRIGIGRPPGKMDAANFV+R F+KQEREEL
Sbjct: 181 LRMLPKGGHGGHNGMRSIIDHFKGSRDFPRLRIGIGRPPGKMDAANFVLRPFNKQEREEL 240

Query: 241 DFTLRVGVDAIRILLLEGFNKSATFVNTNKPLEQI 276
           +FTL+VG DAIRILLLEGFNKSATFVNTNKPLEQI
Sbjct: 241 NFTLQVGADAIRILLLEGFNKSATFVNTNKPLEQI 273

[Close]

BLAST of Sed0021504 vs. NCBI nr
Match: KAG6572934.1 (Peptidyl-tRNA hydrolase, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 439.5 bits (1129), Expect = 2.1e-119
Identity = 230/276 (83.33%), Postives = 246/276 (89.13%), Query Frame = 0


Query: 1   MNIGASISSLSAPRLPVRLHCFRISKTLISFASLPFLNSASSRIFSSMASSITAASMPSS 60
           MNI AS+SSL+A RLPV LHCFR  +T ISF SL  LN  S  IFSSM SSIT ASM +S
Sbjct: 1   MNIAASLSSLAALRLPVCLHCFRTFRTPISFPSLS-LNPPSLHIFSSMTSSIT-ASMSTS 60

Query: 61  EPMTTDQLAVDDKKPAPPPPKPWLIVGLGNPGKLFDRTRHNVGFEMVDSVAEAEGISMSS 120
            P+  D LA+++ KPA PPPKPWLIVGLGNPGK ++RTRHNVGFEMVD+VAE EGISMSS
Sbjct: 61  SPLAPDLLALEENKPA-PPPKPWLIVGLGNPGKKYERTRHNVGFEMVDAVAEVEGISMSS 120

Query: 121 VSFKAQIGKGFIGNVPVMLVKPQTFMNASGVSVGAIVSYHKIPLNQVLVIFDDLDLPFAK 180
            SFKA IGKGFIG+VPVML KPQTFMNASG SVGAIVSY+KIPL QVLVIFDDLDLPFAK
Sbjct: 121 ASFKALIGKGFIGDVPVMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDLDLPFAK 180

Query: 181 LRMLPKGGHGGHNGMRSIIDHLKGSRDFPRLRIGIGRPPGKMDAANFVMRSFSKQEREEL 240
           LRMLPKGGHGGHNGMRSIIDHLKGSRDFPRLRIGIGRPPGKMDAANFVMR F+KQEREEL
Sbjct: 181 LRMLPKGGHGGHNGMRSIIDHLKGSRDFPRLRIGIGRPPGKMDAANFVMRPFNKQEREEL 240

Query: 241 DFTLRVGVDAIRILLLEGFNKSATFVNTNKPLEQIG 277
           DFT++VGVDAIRILLLEGFNKSATFVNTNKPLEQIG
Sbjct: 241 DFTMQVGVDAIRILLLEGFNKSATFVNTNKPLEQIG 273

[Close]

BLAST of Sed0021504 vs. NCBI nr
Match: XP_023541955.1 (peptidyl-tRNA hydrolase, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 438.0 bits (1125), Expect = 6.2e-119
Identity = 226/276 (81.88%), Postives = 246/276 (89.13%), Query Frame = 0


Query: 1   MNIGASISSLSAPRLPVRLHCFRISKTLISFASLPFLNSASSRIFSSMASSITAASMPSS 60
           M+ GAS+SS++A R P+ LHCFR  +T ISF  L  LN  S  IF+SM SS T ASM +S
Sbjct: 1   MSFGASLSSVAALRFPICLHCFRTPRTPISFPYLS-LNPGSLHIFASMTSSFT-ASMSTS 60

Query: 61  EPMTTDQLAVDDKKPAPPPPKPWLIVGLGNPGKLFDRTRHNVGFEMVDSVAEAEGISMSS 120
            P+  DQLAV++KKPA PPPKPWLIVGLGNPGK ++RTRHNVGFEMVD+VAE EGISMSS
Sbjct: 61  SPLAPDQLAVEEKKPA-PPPKPWLIVGLGNPGKKYERTRHNVGFEMVDAVAEVEGISMSS 120

Query: 121 VSFKAQIGKGFIGNVPVMLVKPQTFMNASGVSVGAIVSYHKIPLNQVLVIFDDLDLPFAK 180
           VSFKA IGKGFIG+VP+ML KPQTFMNASG SVGAIVSY+KIPL QVLVIFDDLDLPFAK
Sbjct: 121 VSFKALIGKGFIGDVPIMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDLDLPFAK 180

Query: 181 LRMLPKGGHGGHNGMRSIIDHLKGSRDFPRLRIGIGRPPGKMDAANFVMRSFSKQEREEL 240
           LRMLPKGGHGGHNGMRSIIDHLKGSRDFPRLRIGIGRPPGKMDAANFVMR F+KQEREEL
Sbjct: 181 LRMLPKGGHGGHNGMRSIIDHLKGSRDFPRLRIGIGRPPGKMDAANFVMRPFNKQEREEL 240

Query: 241 DFTLRVGVDAIRILLLEGFNKSATFVNTNKPLEQIG 277
           DFT++VGVDAIRILLLEGFNKSATFVNTNKPLEQIG
Sbjct: 241 DFTMQVGVDAIRILLLEGFNKSATFVNTNKPLEQIG 273

[Close]

BLAST of Sed0021504 vs. ExPASy Swiss-Prot
Match: Q8GW64 (Peptidyl-tRNA hydrolase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g18440 PE=2 SV=2)

HSP 1 Score: 326.6 bits (836), Expect = 2.7e-88
Identity = 176/281 (62.63%), Postives = 212/281 (75.44%), Query Frame = 0


Query: 5   ASISSLSAPRLPVRLHCFRISKTLISFA--------SLPFLNSASSRIFSSMASSITAAS 64
           A I++LS P     L  FR   T +S A         +  L    S+  SS + S++ +S
Sbjct: 8   AKIANLSFPSNCCSLF-FRSPATFLSPALPCRKLTKGIRGLEGLMSQCLSSSSQSLSFSS 67

Query: 65  MP-SSEPMTTDQLAVDDKKPAPPPPK-PWLIVGLGNPGKLFDRTRHNVGFEMVDSVAEAE 124
              SS+P +    A+   KP  PP + PWLIVGLGNPGK +  TRHNVGFEMVD++A+AE
Sbjct: 68  NSFSSQPESELLQALPSSKPKSPPLQLPWLIVGLGNPGKKYQGTRHNVGFEMVDALADAE 127

Query: 125 GISMSSVSFKAQIGKGFIGNVPVMLVKPQTFMNASGVSVGAIVSYHKIPLNQVLVIFDDL 184
           GISM++V+FKA  GKG IGN+P+ML KPQTFMN SG SVG IVS++KIPL QVLV++DDL
Sbjct: 128 GISMNTVNFKALFGKGVIGNIPIMLAKPQTFMNLSGESVGQIVSFYKIPLKQVLVVYDDL 187

Query: 185 DLPFAKLRMLPKGGHGGHNGMRSIIDHLKGSRDFPRLRIGIGRPPGKMDAANFVMRSFSK 244
           DLPF KLR+LPKGGHGGHNGMRSIID LKGSRDFPRLRIGIGRPPGKMD ANFV+R F++
Sbjct: 188 DLPFGKLRLLPKGGHGGHNGMRSIIDRLKGSRDFPRLRIGIGRPPGKMDTANFVLRQFNR 247

Query: 245 QEREELDFTLRVGVDAIRILLLEGFNKSATFVNTNKPLEQI 276
           QE+EELD T + G++AIRILLLEGFNKSATFVNT K +EQ+
Sbjct: 248 QEQEELDHTFQTGLEAIRILLLEGFNKSATFVNTRKSMEQL 287

[Close]

BLAST of Sed0021504 vs. ExPASy Swiss-Prot
Match: Q5N9Q7 (Peptidyl-tRNA hydrolase, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0693900 PE=2 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 2.0e-83
Identity = 143/195 (73.33%), Postives = 171/195 (87.69%), Query Frame = 0


Query: 81  KPWLIVGLGNPGKLFDRTRHNVGFEMVDSVAEAEGISMSSVSFKAQIGKGFIGNVPVMLV 140
           KPWL VGLGNPGK++  TRHNVGFEM+D +AEAEGIS+SS+ FKA +GKG IG+ P+ML 
Sbjct: 54  KPWLFVGLGNPGKVYQGTRHNVGFEMIDVIAEAEGISLSSMQFKAMVGKGRIGDAPIMLA 113

Query: 141 KPQTFMNASGVSVGAIVSYHKIPLNQVLVIFDDLDLPFAKLRMLPKGGHGGHNGMRSIID 200
           KPQTFMNASG SVG +VSY KIPLNQVLV++DDLDLPFAKLR+LPKGGHGGHNG+RSII+
Sbjct: 114 KPQTFMNASGESVGQLVSYFKIPLNQVLVMYDDLDLPFAKLRLLPKGGHGGHNGVRSIIN 173

Query: 201 HLKGSRDFPRLRIGIGRPPGKMDAANFVMRSFSKQEREELDFTLRVGVDAIRILLLEGFN 260
           HLK +RDFPRLRIGIGRPPGKMD ANFV+R F+++E+EELDF    G++A+RI+ LEGFN
Sbjct: 174 HLKQNRDFPRLRIGIGRPPGKMDPANFVLRPFNRKEQEELDFAFHRGLEAVRIMALEGFN 233

Query: 261 KSATFVNTNKPLEQI 276
           KSAT+VNT +  E +
Sbjct: 234 KSATYVNTAQSSEML 248

[Close]

BLAST of Sed0021504 vs. ExPASy Swiss-Prot
Match: Q6NLS8 (Peptidyl-tRNA hydrolase, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g19830 PE=2 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 7.0e-57
Identity = 97/195 (49.74%), Postives = 143/195 (73.33%), Query Frame = 0


Query: 81  KPWLIVGLGNPGKLFDRTRHNVGFEMVDSVAEAEGISMSSVSFKAQIGKGFIGNVPVMLV 140
           +PWL +GLGNPG  +  TRHN+GFEM+D  AE+ GI M+ V+FKA +G+GF+ ++PV+L 
Sbjct: 17  RPWLFLGLGNPGDKYKGTRHNIGFEMIDVFAESVGIQMNLVNFKAIMGQGFVADLPVILA 76

Query: 141 KPQTFMNASGVSVGAIVSYHKIPLNQVLVIFDDLDLPFAKLRMLPKGGHGGHNGMRSIID 200
           KPQT+MN SG S G + +Y+K+PLN+VLV+ DD+ LP   LR+  KGGHG HNG++S+++
Sbjct: 77  KPQTYMNLSGESSGPLAAYYKLPLNRVLVVHDDMQLPCGVLRLQEKGGHGCHNGLKSVMN 136

Query: 201 HLKGSRDFPRLRIGIGRPPGKMDAANFVMRSFSKQEREELDFTLRVGVDAIRILLLEGFN 260
           H +G+R+F RLRIGIG+PPG+MD   F+++ FS   RE +D  L  GVDA++++L + F 
Sbjct: 137 HFRGNREFARLRIGIGKPPGQMDPKAFLLQKFSMPARERMDKALAEGVDALKLVLAKDFG 196

Query: 261 KSATFVNTNKPLEQI 276
           +S    N  +  + +
Sbjct: 197 ESWRLFNVEQKYKHL 211

[Close]

BLAST of Sed0021504 vs. ExPASy Swiss-Prot
Match: Q9M5P4 (Chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic OS=Zea mays OX=4577 GN=CRS2 PE=1 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 1.0e-55
Identity = 114/239 (47.70%), Postives = 155/239 (64.85%), Query Frame = 0


Query: 30  SFASLPFLNSASSRIFSSMASSITAASMPSSEPMT-TDQLAVDDKKPAPPPPKPWLIVGL 89
           S  S PFL S     F     S+TA       P   T   +V D    P    PWLI GL
Sbjct: 13  SHFSAPFLPS-----FRMPRKSLTAPLHRIRRPRPFTVVSSVPDPAAGPVEYTPWLIAGL 72

Query: 90  GNPGKLFDRTRHNVGFEMVDSVAEAEGISMSSVSFKAQIGKGFIGNVPVMLVKPQTFMNA 149
           GNPG  +  TRHNVGFEMVD +A  EGI+M+++  K+ +G G IG VPV++VKPQ++MN 
Sbjct: 73  GNPGNKYYGTRHNVGFEMVDRIAAEEGITMNTIQSKSLLGIGSIGEVPVLVVKPQSYMNY 132

Query: 150 SGVSVGAIVSYHKIPLNQVLVIFDDLDLPFAKLRMLPKGGHGGHNGMRSIIDHLKGSRDF 209
           SG ++G + +Y+++PL  +L+I+DD  LP   LR+  KGGHG HNG++++I+HL G R+F
Sbjct: 133 SGEAIGPLAAYYQVPLRHILLIYDDTSLPNGVLRLQKKGGHGRHNGLQNVIEHLDGRREF 192

Query: 210 PRLRIGIGRPPGKMDAANFVMRSFSKQEREELDFTLRVGVDAIRILLLEGFNKSATFVN 268
           PRL IGIG PPGKMD   F+++ FS +ER ++D  L  GVDA+R L+L+GF+ S    N
Sbjct: 193 PRLSIGIGSPPGKMDPRAFLLQKFSSEERVQIDTALEQGVDAVRTLVLKGFSGSTERFN 246

[Close]

BLAST of Sed0021504 vs. ExPASy Swiss-Prot
Match: Q5ZCL8 (Chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0132800 PE=2 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 4.3e-54
Identity = 97/194 (50.00%), Postives = 140/194 (72.16%), Query Frame = 0


Query: 69  AVDDKKPAPPPPKPWLIVGLGNPGKLFDRTRHNVGFEMVDSVAEAEGISMSSVSFKAQIG 128
           +V D    P    PWLI GLGNPG  +  TRHNVGFEMVD +A  EGI+M+++  K+ +G
Sbjct: 51  SVPDPAARPAEYTPWLIAGLGNPGSKYHGTRHNVGFEMVDRIARDEGITMNTIQSKSLLG 110

Query: 129 KGFIGNVPVMLVKPQTFMNASGVSVGAIVSYHKIPLNQVLVIFDDLDLPFAKLRMLPKGG 188
            G IG VPV+LVKPQ+++N SG ++G + +Y+++PL  +LV++D++ LP   LR+  KGG
Sbjct: 111 IGSIGEVPVLLVKPQSYINYSGEAIGPLAAYYQVPLRHILVMYDEMSLPNGVLRLQRKGG 170

Query: 189 HGGHNGMRSIIDHLKGSRDFPRLRIGIGRPPGKMDAANFVMRSFSKQEREELDFTLRVGV 248
           HG HNG++++++ L  SR+ PRL IGIG PPGKMD   F+++ FS +ER ++D  L  GV
Sbjct: 171 HGRHNGLQNVMECLDSSRELPRLSIGIGSPPGKMDTRAFLLQKFSSEERLQIDTALEQGV 230

Query: 249 DAIRILLLEGFNKS 263
           DA+R L+L+GF+ S
Sbjct: 231 DAVRTLVLKGFSGS 244

[Close]

BLAST of Sed0021504 vs. ExPASy TrEMBL
Match: A0A6J1JW15 (peptidyl-tRNA hydrolase, mitochondrial isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111490211 PE=3 SV=1)

HSP 1 Score: 441.0 bits (1133), Expect = 3.6e-120
Identity = 230/276 (83.33%), Postives = 247/276 (89.49%), Query Frame = 0


Query: 1   MNIGASISSLSAPRLPVRLHCFRISKTLISFASLPFLNSASSRIFSSMASSITAASMPSS 60
           MNI AS+SSL+A RLP+ LHCF   +T ISF SL  LN  S  IFSSM SSIT ASM +S
Sbjct: 1   MNIAASLSSLAALRLPICLHCFPTFRTPISFPSLS-LNPPSLHIFSSMTSSIT-ASMSTS 60

Query: 61  EPMTTDQLAVDDKKPAPPPPKPWLIVGLGNPGKLFDRTRHNVGFEMVDSVAEAEGISMSS 120
            P+  DQLAV++KKPA PPPKPWLIVGLGNPGK ++RTRHNVGFEM+D+VAE EGISMSS
Sbjct: 61  SPLAPDQLAVEEKKPA-PPPKPWLIVGLGNPGKKYERTRHNVGFEMLDAVAEVEGISMSS 120

Query: 121 VSFKAQIGKGFIGNVPVMLVKPQTFMNASGVSVGAIVSYHKIPLNQVLVIFDDLDLPFAK 180
            SFKA IGKGFIG+VPVML KPQTFMNASG SVGAIVSY+KIPL QVLVIFDDLDLPFAK
Sbjct: 121 ASFKALIGKGFIGDVPVMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDLDLPFAK 180

Query: 181 LRMLPKGGHGGHNGMRSIIDHLKGSRDFPRLRIGIGRPPGKMDAANFVMRSFSKQEREEL 240
           LRMLPKGGHGGHNGMRSIIDHLKGSRDFPRLRIGIGRPPGKMDAANFVMR F+KQEREEL
Sbjct: 181 LRMLPKGGHGGHNGMRSIIDHLKGSRDFPRLRIGIGRPPGKMDAANFVMRPFNKQEREEL 240

Query: 241 DFTLRVGVDAIRILLLEGFNKSATFVNTNKPLEQIG 277
           DFT++VGVDAIRILLLEGFNKSATFVNTNKPLEQIG
Sbjct: 241 DFTMQVGVDAIRILLLEGFNKSATFVNTNKPLEQIG 273

[Close]

BLAST of Sed0021504 vs. ExPASy TrEMBL
Match: A0A1S3C5R3 (peptidyl-tRNA hydrolase, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103496915 PE=3 SV=1)

HSP 1 Score: 439.5 bits (1129), Expect = 1.0e-119
Identity = 228/275 (82.91%), Postives = 247/275 (89.82%), Query Frame = 0


Query: 1   MNIGASISSLSAPRLPVRLHCFRISKTLISFASLPFLNSASSRIFSSMASSITAASMPSS 60
           MNIGASISS++A RLP  +H FR S+TLISF SL  L+S +   FSS+ SSITA+   SS
Sbjct: 1   MNIGASISSVAALRLPFSIHSFRTSRTLISFPSLSLLHSPTFHNFSSITSSITASMSTSS 60

Query: 61  EPMTTDQLAVDDKKPAPPPPKPWLIVGLGNPGKLFDRTRHNVGFEMVDSVAEAEGISMSS 120
            P TTDQ A+DDKKPA PPPKPWLIVGLGNPGK +DRTRHNVGFEMVD+VAEAEGIS+S+
Sbjct: 61  SP-TTDQPALDDKKPA-PPPKPWLIVGLGNPGKKYDRTRHNVGFEMVDAVAEAEGISISN 120

Query: 121 VSFKAQIGKGFIGNVPVMLVKPQTFMNASGVSVGAIVSYHKIPLNQVLVIFDDLDLPFAK 180
           VSFKA IGKGFIG+VPVML KPQTFMNASG SVGAIVSY+KIPL QVLVIFDDLDLPFAK
Sbjct: 121 VSFKALIGKGFIGDVPVMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDLDLPFAK 180

Query: 181 LRMLPKGGHGGHNGMRSIIDHLKGSRDFPRLRIGIGRPPGKMDAANFVMRSFSKQEREEL 240
           LRMLPKGGHGGHNGMRSIIDH KGSRDFPRLRIGIGRPPGKMDAANFV+R F+KQEREEL
Sbjct: 181 LRMLPKGGHGGHNGMRSIIDHFKGSRDFPRLRIGIGRPPGKMDAANFVLRPFNKQEREEL 240

Query: 241 DFTLRVGVDAIRILLLEGFNKSATFVNTNKPLEQI 276
           +FTL+VG DAIRILLLEGFNKSATFVNTNKPLEQI
Sbjct: 241 NFTLQVGADAIRILLLEGFNKSATFVNTNKPLEQI 273

[Close]

BLAST of Sed0021504 vs. ExPASy TrEMBL
Match: A0A6J1GS97 (peptidyl-tRNA hydrolase, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456993 PE=3 SV=1)

HSP 1 Score: 436.4 bits (1121), Expect = 8.8e-119
Identity = 229/276 (82.97%), Postives = 244/276 (88.41%), Query Frame = 0


Query: 1   MNIGASISSLSAPRLPVRLHCFRISKTLISFASLPFLNSASSRIFSSMASSITAASMPSS 60
           MNI AS+SSL+A RLPV LHCFR  +T ISF SL  LN  S  IFSSM SS T ASM +S
Sbjct: 1   MNIAASLSSLAALRLPVCLHCFRTFRTPISFPSLS-LNPPSLHIFSSMTSSFT-ASMSTS 60

Query: 61  EPMTTDQLAVDDKKPAPPPPKPWLIVGLGNPGKLFDRTRHNVGFEMVDSVAEAEGISMSS 120
            P+  D LAV++ KPA PPPKPWLIVGLGNPGK ++RTRHNVGFEMVD+VA  EGISMSS
Sbjct: 61  SPLAPDLLAVEENKPA-PPPKPWLIVGLGNPGKKYERTRHNVGFEMVDAVAVVEGISMSS 120

Query: 121 VSFKAQIGKGFIGNVPVMLVKPQTFMNASGVSVGAIVSYHKIPLNQVLVIFDDLDLPFAK 180
            SFKA IGKGFIG+VPVML KPQTFMNASG SVGAIVSY+KIPL QVLVIFDDLDLPFAK
Sbjct: 121 ASFKALIGKGFIGDVPVMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDLDLPFAK 180

Query: 181 LRMLPKGGHGGHNGMRSIIDHLKGSRDFPRLRIGIGRPPGKMDAANFVMRSFSKQEREEL 240
           LRMLPKGGHGGHNGMRSIIDHLKGSRDFPRLRIGIGRPPGKMDAANFVMR F+KQEREEL
Sbjct: 181 LRMLPKGGHGGHNGMRSIIDHLKGSRDFPRLRIGIGRPPGKMDAANFVMRPFNKQEREEL 240

Query: 241 DFTLRVGVDAIRILLLEGFNKSATFVNTNKPLEQIG 277
           DFT++VGVDAIRILLLEGFNKSATFVNTNKPLEQIG
Sbjct: 241 DFTMQVGVDAIRILLLEGFNKSATFVNTNKPLEQIG 273

[Close]

BLAST of Sed0021504 vs. ExPASy TrEMBL
Match: A0A0A0LVQ7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042230 PE=3 SV=1)

HSP 1 Score: 434.9 bits (1117), Expect = 2.6e-118
Identity = 227/275 (82.55%), Postives = 245/275 (89.09%), Query Frame = 0


Query: 1   MNIGASISSLSAPRLPVRLHCFRISKTLISFASLPFLNSASSRIFSSMASSITAASMPSS 60
           M IGASISS++A RLP   HCF  SKTLISF SL  L+S +  IFSS+ SSITA+   SS
Sbjct: 1   MIIGASISSVAALRLPFSFHCFPTSKTLISFPSLSLLHSPTFHIFSSITSSITASMSTSS 60

Query: 61  EPMTTDQLAVDDKKPAPPPPKPWLIVGLGNPGKLFDRTRHNVGFEMVDSVAEAEGISMSS 120
            P TT+Q A+DDKKPA PPPKPWLIVGLGNPGK +DRTRHNVGFEMVD+VAEAEGIS+S+
Sbjct: 61  SP-TTEQPALDDKKPA-PPPKPWLIVGLGNPGKKYDRTRHNVGFEMVDAVAEAEGISISN 120

Query: 121 VSFKAQIGKGFIGNVPVMLVKPQTFMNASGVSVGAIVSYHKIPLNQVLVIFDDLDLPFAK 180
           VSFKA IGKGFIG+VPVML KPQTFMNASG SVGAIVSY+KIPL QVLVIFDDLDLPFAK
Sbjct: 121 VSFKALIGKGFIGDVPVMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDLDLPFAK 180

Query: 181 LRMLPKGGHGGHNGMRSIIDHLKGSRDFPRLRIGIGRPPGKMDAANFVMRSFSKQEREEL 240
           LRMLPKGGHGGHNGMRSIIDH KGSRDFPRLRIGIGRPPGKMDAANFV+R F+KQEREEL
Sbjct: 181 LRMLPKGGHGGHNGMRSIIDHFKGSRDFPRLRIGIGRPPGKMDAANFVLRPFNKQEREEL 240

Query: 241 DFTLRVGVDAIRILLLEGFNKSATFVNTNKPLEQI 276
           +FTL+VG DAIRILLLEGFNKSATFVNTNK LEQI
Sbjct: 241 NFTLQVGEDAIRILLLEGFNKSATFVNTNKSLEQI 273

[Close]

BLAST of Sed0021504 vs. ExPASy TrEMBL
Match: A0A6J1C906 (peptidyl-tRNA hydrolase, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111008552 PE=3 SV=1)

HSP 1 Score: 429.5 bits (1103), Expect = 1.1e-116
Identity = 223/275 (81.09%), Postives = 240/275 (87.27%), Query Frame = 0


Query: 1   MNIGASISSLSAPRLPVRLHCFRISKTLISFASLPFLNSASSRIFSSMASSITAASMPSS 60
           MNIG SISS++A RLP+RLHCFR SK L SF      NS S RIFSSM+         +S
Sbjct: 1   MNIGVSISSIAALRLPIRLHCFRTSKILTSFP-----NSGSLRIFSSMS---------TS 60

Query: 61  EPMTTDQLAVDDKKPAPPPPKPWLIVGLGNPGKLFDRTRHNVGFEMVDSVAEAEGISMSS 120
            P T DQLAVDDKKP+ PPPKPWLIVGLGNPGK +D TRHNVGFEMVD+VAEAEGISMSS
Sbjct: 61  SPPTADQLAVDDKKPS-PPPKPWLIVGLGNPGKKYDGTRHNVGFEMVDTVAEAEGISMSS 120

Query: 121 VSFKAQIGKGFIGNVPVMLVKPQTFMNASGVSVGAIVSYHKIPLNQVLVIFDDLDLPFAK 180
           VSFKA IGKGFIG+VP+ML KPQTFMNASG SVGAIVSY+KIPL QVLVIFDDLDLPF K
Sbjct: 121 VSFKALIGKGFIGDVPIMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDLDLPFGK 180

Query: 181 LRMLPKGGHGGHNGMRSIIDHLKGSRDFPRLRIGIGRPPGKMDAANFVMRSFSKQEREEL 240
           LRMLPKGGHGG NGMRSIIDHLKGSRDFPRLRIGIGRPPGKMDAANFV+R F+KQEREEL
Sbjct: 181 LRMLPKGGHGGQNGMRSIIDHLKGSRDFPRLRIGIGRPPGKMDAANFVLRPFNKQEREEL 240

Query: 241 DFTLRVGVDAIRILLLEGFNKSATFVNTNKPLEQI 276
           +FTL+VG++AIRILLLEGFNKSATFVNTNKPLEQI
Sbjct: 241 NFTLQVGLEAIRILLLEGFNKSATFVNTNKPLEQI 260

[Close]

BLAST of Sed0021504 vs. TAIR 10
Match: AT1G18440.1 (Peptidyl-tRNA hydrolase family protein )

HSP 1 Score: 326.6 bits (836), Expect = 1.9e-89
Identity = 176/281 (62.63%), Postives = 212/281 (75.44%), Query Frame = 0


Query: 5   ASISSLSAPRLPVRLHCFRISKTLISFA--------SLPFLNSASSRIFSSMASSITAAS 64
           A I++LS P     L  FR   T +S A         +  L    S+  SS + S++ +S
Sbjct: 8   AKIANLSFPSNCCSLF-FRSPATFLSPALPCRKLTKGIRGLEGLMSQCLSSSSQSLSFSS 67

Query: 65  MP-SSEPMTTDQLAVDDKKPAPPPPK-PWLIVGLGNPGKLFDRTRHNVGFEMVDSVAEAE 124
              SS+P +    A+   KP  PP + PWLIVGLGNPGK +  TRHNVGFEMVD++A+AE
Sbjct: 68  NSFSSQPESELLQALPSSKPKSPPLQLPWLIVGLGNPGKKYQGTRHNVGFEMVDALADAE 127

Query: 125 GISMSSVSFKAQIGKGFIGNVPVMLVKPQTFMNASGVSVGAIVSYHKIPLNQVLVIFDDL 184
           GISM++V+FKA  GKG IGN+P+ML KPQTFMN SG SVG IVS++KIPL QVLV++DDL
Sbjct: 128 GISMNTVNFKALFGKGVIGNIPIMLAKPQTFMNLSGESVGQIVSFYKIPLKQVLVVYDDL 187

Query: 185 DLPFAKLRMLPKGGHGGHNGMRSIIDHLKGSRDFPRLRIGIGRPPGKMDAANFVMRSFSK 244
           DLPF KLR+LPKGGHGGHNGMRSIID LKGSRDFPRLRIGIGRPPGKMD ANFV+R F++
Sbjct: 188 DLPFGKLRLLPKGGHGGHNGMRSIIDRLKGSRDFPRLRIGIGRPPGKMDTANFVLRQFNR 247

Query: 245 QEREELDFTLRVGVDAIRILLLEGFNKSATFVNTNKPLEQI 276
           QE+EELD T + G++AIRILLLEGFNKSATFVNT K +EQ+
Sbjct: 248 QEQEELDHTFQTGLEAIRILLLEGFNKSATFVNTRKSMEQL 287

[Close]

BLAST of Sed0021504 vs. TAIR 10
Match: AT5G19830.1 (Peptidyl-tRNA hydrolase family protein )

HSP 1 Score: 222.2 bits (565), Expect = 5.0e-58
Identity = 97/195 (49.74%), Postives = 143/195 (73.33%), Query Frame = 0


Query: 81  KPWLIVGLGNPGKLFDRTRHNVGFEMVDSVAEAEGISMSSVSFKAQIGKGFIGNVPVMLV 140
           +PWL +GLGNPG  +  TRHN+GFEM+D  AE+ GI M+ V+FKA +G+GF+ ++PV+L 
Sbjct: 17  RPWLFLGLGNPGDKYKGTRHNIGFEMIDVFAESVGIQMNLVNFKAIMGQGFVADLPVILA 76

Query: 141 KPQTFMNASGVSVGAIVSYHKIPLNQVLVIFDDLDLPFAKLRMLPKGGHGGHNGMRSIID 200
           KPQT+MN SG S G + +Y+K+PLN+VLV+ DD+ LP   LR+  KGGHG HNG++S+++
Sbjct: 77  KPQTYMNLSGESSGPLAAYYKLPLNRVLVVHDDMQLPCGVLRLQEKGGHGCHNGLKSVMN 136

Query: 201 HLKGSRDFPRLRIGIGRPPGKMDAANFVMRSFSKQEREELDFTLRVGVDAIRILLLEGFN 260
           H +G+R+F RLRIGIG+PPG+MD   F+++ FS   RE +D  L  GVDA++++L + F 
Sbjct: 137 HFRGNREFARLRIGIGKPPGQMDPKAFLLQKFSMPARERMDKALAEGVDALKLVLAKDFG 196

Query: 261 KSATFVNTNKPLEQI 276
           +S    N  +  + +
Sbjct: 197 ESWRLFNVEQKYKHL 211

[Close]

BLAST of Sed0021504 vs. TAIR 10
Match: AT5G16140.1 (Peptidyl-tRNA hydrolase family protein )

HSP 1 Score: 211.8 bits (538), Expect = 6.8e-55
Identity = 94/186 (50.54%), Postives = 137/186 (73.66%), Query Frame = 0


Query: 82  PWLIVGLGNPGKLFDRTRHNVGFEMVDSVAEAEGISMSSVSFKAQIGKGFIGNVPVMLVK 141
           PWLIVGLGNPG  +  TRHNVGFEM+D +A  EG+ M+++  KA IG G I +VP++L K
Sbjct: 45  PWLIVGLGNPGNKYHGTRHNVGFEMIDVLARKEGVLMNTIQSKALIGIGAIEDVPILLAK 104

Query: 142 PQTFMNASGVSVGAIVSYHKIPLNQVLVIFDDLDLPFAKLRMLPKGGHGGHNGMRSIIDH 201
           PQT+MN SG SVG++ S++++PL  +L+I+D++ LP   LR+ PKGG G HNG++S++ H
Sbjct: 105 PQTYMNFSGESVGSLASHYRVPLRHILMIYDEMALPNGVLRLQPKGGQGYHNGVKSVMGH 164

Query: 202 LKGSRDFPRLRIGIGRPPGKMDAANFVMRSFSKQEREELDFTLRVGVDAIRILLLEGFNK 261
           L G R+FPRL IGIG+PPG MD   F+++ FS  E+++++  L  G +A++ L+L GFN+
Sbjct: 165 LDGRRNFPRLSIGIGKPPGNMDMKAFLLQKFSPLEQKQIEEALEQGSEAVKTLVLNGFNQ 224

Query: 262 SATFVN 268
             +  N
Sbjct: 225 GISRFN 230

[Close]

BLAST of Sed0021504 vs. TAIR 10
Match: AT5G16140.2 (Peptidyl-tRNA hydrolase family protein )

HSP 1 Score: 211.8 bits (538), Expect = 6.8e-55
Identity = 94/186 (50.54%), Postives = 137/186 (73.66%), Query Frame = 0


Query: 82  PWLIVGLGNPGKLFDRTRHNVGFEMVDSVAEAEGISMSSVSFKAQIGKGFIGNVPVMLVK 141
           PWLIVGLGNPG  +  TRHNVGFEM+D +A  EG+ M+++  KA IG G I +VP++L K
Sbjct: 45  PWLIVGLGNPGNKYHGTRHNVGFEMIDVLARKEGVLMNTIQSKALIGIGAIEDVPILLAK 104

Query: 142 PQTFMNASGVSVGAIVSYHKIPLNQVLVIFDDLDLPFAKLRMLPKGGHGGHNGMRSIIDH 201
           PQT+MN SG SVG++ S++++PL  +L+I+D++ LP   LR+ PKGG G HNG++S++ H
Sbjct: 105 PQTYMNFSGESVGSLASHYRVPLRHILMIYDEMALPNGVLRLQPKGGQGYHNGVKSVMGH 164

Query: 202 LKGSRDFPRLRIGIGRPPGKMDAANFVMRSFSKQEREELDFTLRVGVDAIRILLLEGFNK 261
           L G R+FPRL IGIG+PPG MD   F+++ FS  E+++++  L  G +A++ L+L GFN+
Sbjct: 165 LDGRRNFPRLSIGIGKPPGNMDMKAFLLQKFSPLEQKQIEEALEQGSEAVKTLVLNGFNQ 224

Query: 262 SATFVN 268
             +  N
Sbjct: 225 GISRFN 230

[Close]

BLAST of Sed0021504 vs. TAIR 10
Match: AT5G38290.2 (Peptidyl-tRNA hydrolase family protein )

HSP 1 Score: 209.1 bits (531), Expect = 4.4e-54
Identity = 98/200 (49.00%), Postives = 137/200 (68.50%), Query Frame = 0


Query: 68  LAVDDKKPAPPPPKPWLIVGLGNPGKLFDRTRHNVGFEMVDSVAEAEGISMSSVSFKAQI 127
           L V D K       PWLIVGLGNPG  +  TRHN+GFEM+D +A A  ISM+++  KA +
Sbjct: 41  LPVSDNKLLKFEYTPWLIVGLGNPGLKYYGTRHNIGFEMIDHIARATDISMNTIQSKALV 100

Query: 128 GKGFIGNVPVMLVKPQTFMNASGVSVGAIVSYHKIPLNQVLVIFDDLDLPFAKLRMLPKG 187
           G G +G VP++LVKPQ +MN SG SVG + +Y++IPL  +L+I+DD+ L    LR+ PKG
Sbjct: 101 GIGSVGEVPILLVKPQGYMNFSGESVGPLAAYYQIPLRHILMIYDDMGLSNGVLRLQPKG 160

Query: 188 GHGGHNGMRSIIDHLKGSRDFPRLRIGIGRPPGKMDAANFVMRSFSKQEREELDFTLRVG 247
           GH  HNG++++ +HL G R +PRL IGIG PPG MD   F+++ FS  ER+++D  L  G
Sbjct: 161 GHSQHNGLKNVTEHLNGCRGYPRLSIGIGNPPGNMDMKAFLLQKFSPLERKQMDEGLEQG 220

Query: 248 VDAIRILLLEGFNKSATFVN 268
           V+ ++ L+ EGF+ S +  N
Sbjct: 221 VEGVKTLVEEGFSDSISRFN 240

The following BLAST results are available for this feature:

BLAST of Sed0021504 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038893864.1	9.0e-126	85.82	peptidyl-tRNA hydrolase, mitochondrial isoform X1 [Benincasa hispida] >XP_038893...	[more]
XP_022994507.1	7.4e-120	83.33	peptidyl-tRNA hydrolase, mitochondrial isoform X1 [Cucurbita maxima]	[more]
XP_008457243.1	2.1e-119	82.91	PREDICTED: peptidyl-tRNA hydrolase, chloroplastic [Cucumis melo]	[more]
KAG6572934.1	2.1e-119	83.33	Peptidyl-tRNA hydrolase, chloroplastic, partial [Cucurbita argyrosperma subsp. s...	[more]
XP_023541955.1	6.2e-119	81.88	peptidyl-tRNA hydrolase, chloroplastic [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0021504 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GW64	2.7e-88	62.63	Peptidyl-tRNA hydrolase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g18...	[more]
Q5N9Q7	2.0e-83	73.33	Peptidyl-tRNA hydrolase, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q6NLS8	7.0e-57	49.74	Peptidyl-tRNA hydrolase, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g19...	[more]
Q9M5P4	1.0e-55	47.70	Chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic OS=Zea m...	[more]
Q5ZCL8	4.3e-54	50.00	Chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic OS=Oryza...	[more]

BLAST of Sed0021504 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JW15	3.6e-120	83.33	peptidyl-tRNA hydrolase, mitochondrial isoform X1 OS=Cucurbita maxima OX=3661 GN...	[more]
A0A1S3C5R3	1.0e-119	82.91	peptidyl-tRNA hydrolase, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103496915 P...	[more]
A0A6J1GS97	8.8e-119	82.97	peptidyl-tRNA hydrolase, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=...	[more]
A0A0A0LVQ7	2.6e-118	82.55	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042230 PE=3 SV=1	[more]
A0A6J1C906	1.1e-116	81.09	peptidyl-tRNA hydrolase, chloroplastic OS=Momordica charantia OX=3673 GN=LOC1110...	[more]

BLAST of Sed0021504 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G18440.1	1.9e-89	62.63	Peptidyl-tRNA hydrolase family protein	[more]
AT5G19830.1	5.0e-58	49.74	Peptidyl-tRNA hydrolase family protein	[more]
AT5G16140.1	6.8e-55	50.54	Peptidyl-tRNA hydrolase family protein	[more]
AT5G16140.2	6.8e-55	50.54	Peptidyl-tRNA hydrolase family protein	[more]
AT5G38290.2	4.4e-54	49.00	Peptidyl-tRNA hydrolase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001328	Peptidyl-tRNA hydrolase	PFAM	PF01195	Pept_tRNA_hydro	coord: 84..262 e-value: 1.8E-59 score: 200.7
IPR001328	Peptidyl-tRNA hydrolase	TIGRFAM	TIGR00447	TIGR00447	coord: 84..263 e-value: 5.1E-54 score: 180.8
IPR001328	Peptidyl-tRNA hydrolase	PANTHER	PTHR17224	PEPTIDYL-TRNA HYDROLASE	coord: 40..271
IPR001328	Peptidyl-tRNA hydrolase	HAMAP	MF_00083	Pept_tRNA_hydro_bact	coord: 82..260 score: 32.689201
IPR036416	Peptidyl-tRNA hydrolase superfamily	GENE3D	3.40.50.1470		coord: 70..269 e-value: 6.8E-71 score: 239.8
IPR036416	Peptidyl-tRNA hydrolase superfamily	SUPERFAMILY	53178	Peptidyl-tRNA hydrolase-like	coord: 82..267
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..81
None	No IPR available	PANTHER	PTHR17224:SF5	PEPTIDYL-TRNA HYDROLASE CHLOROPLASTIC	coord: 40..271
IPR018171	Peptidyl-tRNA hydrolase, conserved site	PROSITE	PS01196	PEPT_TRNA_HYDROL_2	coord: 188..198
IPR018171	Peptidyl-tRNA hydrolase, conserved site	PROSITE	PS01195	PEPT_TRNA_HYDROL_1	coord: 95..108

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0021504.1	Sed0021504.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0004045	aminoacyl-tRNA hydrolase activity