Sed0021487 (gene) Chayote v1

Overview


Name	Sed0021487
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Auxin-responsive protein
Location	LG09: 39451993 .. 39461193 (+)
RNA-Seq Expression	Sed0021487
Synteny	Sed0021487

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAATAATAATAAACGAACAAATAAATAAGAAATGACAAGAAAAATAGATTTTTTGTCTTCAAGTTCAGAGAATACACAAATTCCTTTTCTCGGCAAATACTGTTATCAGTCTCTCCTTCTACTTTTCTCGAAACCCTCATCAGAAATTACCCACAAAAAACCCCATTTCTCTTCAAAAATCACTCCAAAATTTAAACTAATCAGCTCTGTAAACACCCATTAATGCAAGAAAATGATGTTTTCTTTAATGGGTCGAAGATTTCTTTTGCTATTTCACTGTGGTTTCATTTCAATTCTGTAATTGGGGAAAAGGGAAAGTGGCCATTGCTACAGTGAGAGCCAACCAATTTTGTTTTTCTGCATATAAACTGAAACCAGCCATTTGTGAGCTTGCTTACTCCATTGTAGTTCTTGATTCTGTCATTTTTTATGTCTAATTTCGTAGATTCTTCTTCTTGTTCTTCGCCTGTTCATGAGGAGAAGAAATGTGGGTCTGTGAGTTTCAAGGACACTGAATTGAGGCTTGGATTGCCTGGTTCTCAGTCTCCTGAGAGGAAATTGGGAAATGGGGTTTTGTTATTTTGTAAGGATTTTGAGGAAAAACAGAGTAATGGGTTGTCTTCTTCTTCTTCTTCTTGTGGTTTGAAGAATTTTGTTTCTGGGTTTAAGAGGGGTTTTTCTGATGCCATTGATGGTTCTGTGAAATGGGGTTTCTGTAATGAGTCTGAGGTTAAGTTAGGGAGTGATGTTAATGGTGGTTTGAAGACTGTGAAGGAAGTGGTTCCTGTTAATAATCAATGTTCTAAGATTGTTTTGGAGAAGAAGCCTGATCAGGTTTCTGAGAATGGTGGTGCTCCTTTGGCTAAGTAAGTTTCGCCAATTTTGTTGTTGTTTACTTGTTTCTACTTTCTTGTCTTTTTTGTTGATTGTGGAATGCTGTTTTTGGTTGAGTTTGTGTTTGAGCATTGAGTTGAATGAATGAATTGTTTGGTTTGTGATGCTTCCTCTGTGGTGTTTTCTTTGCTGATAATGTCAATTTCTTTGTTGGGTTGGGTTCTGTTTTTGTTAATGCTATAATTACACTGCTCTGGCAACCGGGTTTGTTTAGTGGTCAAAGAGGGCTCGAGGAATTAAGAGATTATGATTTCAATTCATGTTGGTCACCTGTCTAGAATTAATTTTTTTTACAGGTTTCCTTTATTGGTAGAGTCAGGCCGACTCTTTCGCGAGGTTAGTCGAGGTGCACTTTAGGTCCGGACACTCACGGATAACAAAAGAAAATTAATTATACTGCTTTGGCTTGCTTGTTTTGGTTGTCTATGTTATGGAGAATTGAGATTAGAATGAATATGCTTGGGTTTCTTACTAAGAAACTTCTATCTGTAAATGAATCTAATGTACAAACAAGGTTGATGATGTTGAACATGGCGCTTGGCCTATTGTGAGTCTCTCCTTCCGCTTGTTGAGCACATGCTCTCAATCTTGTTTATGAAGAATGTCTCCGGCGATTGGCGAAAAGTGAATAGGCTTGAATAGTATGCCTTTTCGTTTGGTCGGGGATGATGTATAGGAAAAGATTGTGCTCACTCTATCAGTTACTACTTTTGCTTGAATTAGTTCATCCTGTATGATTTTGGTGTCTACTGTGTATTTCAAGTTTTTATTCCTTTTTCACTTGGAGAGTTTTTTTTCTTACCAGAGGATGGATTGGAATACTGACCATAAAAATCTATGAAACACAGGGCACAAGTTGTGGGTTGGCCACCAATTCGATCCTTCAGGAAAAACACCATGACGTCTACCAATTCGACAAAGAACGCTGATGAAGCCGAGGGAAAATCGGGATCAACCAGTTGCCTATATGTAAAAGTTAGCATGGAAGGTGCTCCATATCTTAGGAAGGTTGATCTCAAACTGTACAAAAACTACTCTGAACTTTCATTGGCTCTGGAGAAGATGTTTAGCTGCTTCACTATTGGTAAATCCCCCTTGCTCCCAACAAATATTTGATTTTCTAATATCGAATCTATGAACTTTGGTCGTCTTTTTCATTGTTTTTGTTGGAAGCGTGTATAAACACTCACAAAACAAAGAACCAAACAAGGAAAATAATTCACTTGTATTGGAAAAACTTTTCTTGAAAAGCTACAAACTTGATTCACACTTTTCTCTCAAGCTTATTTCTCTTTATTGATGTTTGATACTTTTTGCTTTATGCTTCATTTTGCAACCCTTACAACACATCCTATTTATAGGATTACATGGAAGGATCTAGATCTATAACTCTCATCTAGATCTAACTCACATTCTAACTTAATGTGTAATTGATAACTTATTTGAGTTTATTTCTTACATAACTCTCCTTTTAACTCAACAACATTAAAATATAAAACTTACATTTATTTAATTTCTTAACCTCCTAAATTGAATTTTCAAAACTTAAAACCATGTTTAACTTTCAACATCCCCTCTTAAACATGATTTTCCAAAAACTCCAAGCATCGTCCTCAACTTGTTAAACACATCAACTTTGAGTTGCTTTGTGAAAATATCTACAATTTGATCTTCTGTCTTCACATATTCAACTTGAATCTCTTTTCTTGAAATGCAATCTCTAATAAAGTGAAATTTGGTATCTATGTGCTTACTACGATCATGAAACACTAGATTCTTGGCTAGTGCAATTGTTGACTTGTTATCCACATGGATAACGGTTGCATCCTCTTGCGAAATTCCAATTGCGTTAAGCAAATTTCTTAACCAAACTGCATGACAAACGCATGATGATGCAGCGACATATTCTGCCTCACAAGTAGATAATGTCACAACAGGTTGCTTTTTAGAACTCCAAGTAAAAGATGTATTACCAACAAAAAATAAAAATCCACTCGTACTTTTCCGATCATTCAGATCTCCAGCCCAATCACTATCAGTATAACCTTCAAGCTTGAATTCTTTAGACGGTGTATAAAATAATCCATAGTCAAGTGTACCTTTGAGGTAACGAAGGATTCTCTTTGCCACCTTCAAGTGAGTAGTTGTAGGAGTTTTCATAAACCGACTCACCAATCCAACACTTTAAAGAATATCTGGCCTTGTGCAAGTTAAATACCTTAAACTTCCAACTAAACTTTTGAAATATGAAGGATCTACAACATCTCCATCTTCATATTTGGCCAGCTTTGTTCCAGTTTCCATCGGAGTTGCTACAGGCTTGCAATTAAACATCTTGAATTTTTCAAGGATTTCTTTAGTATAACGCTCTTGAGAAACAAAGATACCTTTCTCTGATTGCTTCACTTCAATGCCAAGATAATATGACATAAGCCCAATATCCGTCATTTCAAATTCTTTCGTCATTGCTACTTTGAGATCTTCAAACATCCTTGGACAATTTCCTGTAAAAATTAAGTCGTCTACATACAGGCAAACCAACAACATATCTCCATGATCATTAGTCTTAATATAAAGCGAATGTTCATGAGGGCATCTCAAATACCCATTATCAATGAAGTATTTGTTGATTCTACTGTTCCTCATTCGTGGCGCCTGTTTCAGTCCATATAGTGTCTTCTTCAACTTCAAAACTTTATCTTCCTGACCTCTTATAGCATAACCAAGAGGTTGTTCCAAGTAAACTTCTTCTTCAAGGTATCCATTCAAGAATGTTGATTTGACATCCATCTGAAAAATCTTCCATTTATTCTGAGCAGCTAATGCAATTAGCAATCTTATGGTCTCTAAGCGTGCAACAGGAGCAAACACTTCATCATAATCAATGCCTTTCTTTTGAGAATAGCCTTTTACAACTAATCTCGCTTTATGTCTCTCCACTTCTCCTTTTTCATTTCGCTTTATCTTGAACACCCATTTGACACCTACTGCTTTCTTTCCTCTAGGAAGAGTAGAAAGTTCCCAAGTATCATTCTTCTTTATGGCCTTCATCTCTTCATCCATCGCATGCTTCCATTTTTCATCTTGTGAAGCTTCTTCAAAATTTAAAGGTTCACTATCACCATAAAGACAAAAAAGAGTAAGATCATTAAAGTTTTGACTTAACTCTTCTGTTTCATCATATATGTCTTGCAAACTTCTCATGCGATGAGGCCCTTCACTAGAACTTGTAGATGATGATGGTGTGTCTTGTTGTGGAGAGATTGGTGATGTAGGTGGTGTTGATGGAGAAGCAACGTCATCACTCAATTTATCATCATCTTCTGGAAACAAGAGAAACTTGTATTCTTTTGGCTCATCATTCCAATTCCATGTTGCTTCCTCATCGAACACAACATCTCTACTAACTATTGTTTTTTCCGTAGCTGGATTATAAAGCTTATAACCTTTTGAGCTTGCATCATATCCAACAAACACATGTTTCTCACTTTTATCATCAAGCTTACTACGTTTTTGATCTGGTACATGAGCATAAGCTATGCTCCCAAATACTCGTAGATGAGCAATAGATGATCTTTTTCTTGTCCATGCTTGTTGAGGAGTTTTATTCCACACACTTCTAGTGGGAGAACGGTTTGACAAGTAAACAAAGACATTCAATCGCTTGTGCCCAAAATTCTTCTGCATATCTTTACTTTTCAACATGCTTGAGCCATGTTAAGTATGGTTCTGTTCTTTCTCTCAACAACGCCATTTTGTTGAGGAGTGTACTGCTGTCATAGGTCGATTTAATTCCATTTTCTTCGCAATATCGTTTGAATTCATTCAAGTGAATTCACCTCCTCTATCGGATCTTAAAGCTTTTATGTATAGACCACTTTCTTTTTCAACAAGAGATTTGAATCTCTTAAACATCTTGAAAGCCTCTGATTTCTCTTTAACAAAATATACCCAAGTTTTTCTATTTAAAATCATCAATAAATAATAAGAAATATTTATTCTTACCGAAAGAACTTGGATTGATTGGTCCACAAAGATCGGTGTGAACAAGCTCTAGTGGTCTTCTTGCTCTTGAAGAAGATTCTTGTGGAAAACTCATTCTTGATTTGTTTGCCATAAAGACAACCTTCACAAATTTGGTCGGGATGTTTTTTACATATGGCAAACCTTTCACCATGTCCTTCCTTGCCAAAGAATCTCGGACCATCAAAGTTCAAATGCCCAAATCTCATGTGCCAAATCCAAGATGGATCTTTCAAACATGACTTTAAACATTTCGCAACATCAGTTTGAATGTTTAACAAAAACATTCTATTCTTCGTCATTTGCACTTGAGCAATCAAATTATCATAATTATCTCTTATTGAAAGCCTATAATCCTTCATCAAAACATTATAGCCTTTCTCCAAGAGTTGTCCCAGACTTAAAATGTTATTCTTCATATTTGGCACATAGTAAACATTAGAGATAAACTCATGCTTACCATTCTTCAAGTTGATTAGAATCTTTCCTTTACCTCTCACAGGTATTTTTGTAGCATCGCCAAATACGATATTTCCACCAATTGATTCATCAAGTTCCACGAACATTGATTTATTTCCACACATGTGATTGCTTGCACCGTTGTCAAGATACCACGAACTACTTTCACATGTTTCTTCTCCTTTACATGTAAGAAGCAAAGACGGCTCACCGTTTTTAATTTCTTGCTCAGCATAGTTAGCATTTTCTTCAACTTTATTTCGGCATTCCCAAGAATAATGACCGAATTTATGACAATTGTAGCATTCAACTTGAATTTTGTCATACTTCCTATCATTATTATTTGATCTTCCACCATATGGTCTTGAATAATTTTGTCTTCCACGACCTCTTGATGAACTAGTACTTGAAGTACTCTCATCGAAATTTCTTTGACTGAAATTTCCTCTACCGCGTCCTCTACGTCCACGATTATGACCACGTCCTCCTCGACTACTTTTTTCTTGATCATATTCTTTTTCTTTGAACTGCAACTTTGATTGGAAAACTTGCTCAGTTGTTTGTTTGTTCTTCTTGAGAAGCTTCTCTTCATGGGCTTGCAAAGTGCCAATGAGTTGATCAATCGACATCGTACTCAAATCTTTTGATTCTTCTATCGCTACAACGATAAAATTGAATCTCTCCTCCAATGAGCGAAGTATCTTCTCAACTACTTGCTCATCATTTATTGTCTCACCATATCTCTTCATTTCATTTACTACACTTTGTAATCTTGAAGTATAATCAAATTGATTCGCACTCCTTCATGTGTAGTGATTCATAATCACCTCTCAATTTTTTAAGGCGGACCTTCTTTACACGATCTACACCTTTATAAGTATTCTCCAAAATTTTCCATGCTTCCGTCGCAGTAGTTGCTCCAGAAATCTTCTCAAAATTTGTATCATCAATTGCTTGATGAATAATGGTGAGTGCCTTTTGATCTTTCTTTCTTGTATTTTGCAAAGCTTCTCTTTGCGCTTGATTTAAAGCCGCGTCATTTTCAGGCTCGTCATAGCCTCTATCAACAATTTCCCAAGCATCTTGTGAACCAAGTAGTGCTTTCATTCGTATACACCAACTACTATAATTTTCCTTCGTCAAGCGAGGCACTTGGAAAGGAACCATATTGTTGTTTGCCATTTGCAAAAACAATTCTCTTCTTTCAAACTCAAGCTCTGATACCACTTTGTTGGAAGCGTGTATAAACACTCACAAAACAAAGAACCAAACAAGGAAAATAATTCACTTGTATTGGAAAAACTTTTCTTGAAAAGCTACAAACTTGATTCACACTTTTCTCTCAAGCTTATTTCTCTTTATTGATGTTTGATACTTTTTGCTTTATGCTTCATTTTGCAACCCTTACAACACATCCTATTTATAGGATTACATGGAAGGATCTAGATCTATAACTCTCATCTAGATCTAACTCACATTCTAACTTAATGTGTAATTGATAACTTATTTGAGTTTATTTCTTACATAACTCTCCTTTTAACTCAACAACATTAAAATATAAAACTTACATTTATTTAATTTCTTAACCTCCTAAATTGAATTTTCAAAACTTAAAATCATGTTTAACTTTCAACAGTTTTATCGACTCAACACGTAGAAAATGTTCATTTGATGTTTTGATTCCTATGATTCAGGGAAGTGTGGTACTGAAGGGCTTCCAACTAAAGAGAGTCTGAGTGAAAGTAATTTGAAGGATTTCCTCCATGGATCTGAGTATGTGCTGACATATGAAGATAAAGATGGAGATTGGATGCTGGTTGGTGATGTCCCTTGGGAGTAAGTTGTTTCCCTATAGTTTGTTTTGGTAGCTTTATTTCATTCTCTCCAGCTCGGAAATAATCGTTTTATTTCTATGAAACAAAGAATCGATTTGTGTAGCCAACAAGAATTGCGCTCAACTGGTATGATGTATGATCTGATAACCAAGGTTATATGAGTTCGAATCTTCGTACCCTTAATTATTATTGAATTCAAAAGAGTCGATTTGTGTAGATTTAGTACATGAATGACAAGTAGAACAGTTATAGGAGATTACTCAACTCTTGCCTAGTAGAACATGTAGTGATTTTAATGCTTGGAGCATGATTTGTTCGGATGGCAATGACATTGGCGATATGTTTGATATGGTCAACTTTAATCCAATTCTTTGTGTCTGATCAATTGCTTTGATTTTCTTGTTTTTTCTTAACTAAAATACATGCATGATCAAGTTGTGTTTTACTTTTTTTCTTATCGTTTCGGATTGGATCTTGCAGGATGTTCACTGATGCATGTAAAAGACTCCGAATCATGAAAGGTTCTGAAGCAATTGGGCTAGGTAGGTTGAGGTGAGGCATAATTTGATGTCTAACATTCTCGTTTTTGCTAAGCTTCGTTCGATCATCTTTTTCGATTATCAATGAAGTATTGCAGATACAAAACAGGCTCAACATGATCTAAAGAAATGTCTGCTTGTTGAATTGCAGCGCCAAGGGCCGTAGAGAAGTGCAAGAACCGAAACTAGCATGATGAAGTCTCAAGCAAGACGTTGAAGACGACATCTCCTCGGATTGTGAAAGCCCTTTTCTTTAAAATTATATTATTGTTCATTTTGTTACAAACTAATGTTGTATCTTATGAAATGCTAACATTTTCCTCGTGTGTTCAATGGTAATTGTTATTGCTGAATCCTATGAGTCTGGTTGCATTTTCATAGCTCTCTGTCTTCTTTCCTTTTATACAACAAACACACAAAAAAGACACCATTCAAATCACTTTCATTTCAGTACCTTAATACGATGCTAAGCTCGATAACGTTAATGCATCACATAACCCAAACAATCATGCACAAAGTAGACATTAGAAACAACTCGAAACATGCTGTATCATCGCGAGAAAGAAGGAAGAGGACGAGCATCAGTGGGTGAAGGGAGGAAGAGGAAGCGTGTTATCTGCAAGAGGTGTTGGCTGGTGAAGATGGGCGACATCGGTCTGCAGCAGAAGCTCGATAACATCGAGGCATCACATAAACAAAACAATCATGCACAAAGGAGAAACTAAGAACAACTCAAATCAAGCTCTATTATCTCGAGAAAGCAGGAAGAGGAGGAGCATCAGCATCTGCAGCAAGAAAAGGAAGCTTGTTAACTGGCAGAGGTGTTGGTCGGTGAAGATGTGCAGCATCGGTCTGCAGTGGAAACTCGAAGGGGGAGATCGGGATTCAGGTTGTGGTGTTGTCGATGACGGTAGACGTAGAAGAAGCAAGGGAGGAGGTAGCTTGTTATCTAGTAGATGTGTTGGTTGGTGAAGATGTGCGACGTCGGTCTGCGGCGGAAGCACGACGAGGGGATCGGGATTCGGGCTGTGGCGTTGTCGACGACGGTAGTGGTAGAAGAAGAGAGGGAGTAGGTGGCTTGTTATCAGGAAAAGGTGTTGGTTGGTGAAGATGGTCGACGTCGGGCTGCAGTGGAAGCTCGACGGGGGGATCGGGACACGGGTCGTGGCGTTGTCGACGACGGTGTCGGTAGAGTAAGCGAGGGAGGAGGTAGCAGAGGAGGCGGAGAGAGGAGAGAATGGCAATGAGGAGTAAAGCTGACAGAAGATAGTCCGTGGGGGAGCGAGCTCTTTTGCAGCCAAATAATATTCCAAGACAAACCATGGCTAAGAGAGAAAGGGGAAGGGGGGGTTCTGACTTGGCCTCTGCAGTGGCTGTCAATTAAAATAGAGAAACAGAAATGTAAGTTTTTTTTTTGGTTCTTTTCTTGTTCAAACAATGAAAGTAGCAG

mRNA sequence

ATAATAATAATAAACGAACAAATAAATAAGAAATGACAAGAAAAATAGATTTTTTGTCTTCAAGTTCAGAGAATACACAAATTCCTTTTCTCGGCAAATACTGTTATCAGTCTCTCCTTCTACTTTTCTCGAAACCCTCATCAGAAATTACCCACAAAAAACCCCATTTCTCTTCAAAAATCACTCCAAAATTTAAACTAATCAGCTCTGTAAACACCCATTAATGCAAGAAAATGATGTTTTCTTTAATGGGTCGAAGATTTCTTTTGCTATTTCACTGTGGTTTCATTTCAATTCTGTAATTGGGGAAAAGGGAAAGTGGCCATTGCTACAGTGAGAGCCAACCAATTTTGTTTTTCTGCATATAAACTGAAACCAGCCATTTGTGAGCTTGCTTACTCCATTGTAGTTCTTGATTCTGTCATTTTTTATGTCTAATTTCGTAGATTCTTCTTCTTGTTCTTCGCCTGTTCATGAGGAGAAGAAATGTGGGTCTGTGAGTTTCAAGGACACTGAATTGAGGCTTGGATTGCCTGGTTCTCAGTCTCCTGAGAGGAAATTGGGAAATGGGGTTTTGTTATTTTGTAAGGATTTTGAGGAAAAACAGAGTAATGGGTTGTCTTCTTCTTCTTCTTCTTGTGGTTTGAAGAATTTTGTTTCTGGGTTTAAGAGGGGTTTTTCTGATGCCATTGATGGTTCTGTGAAATGGGGTTTCTGTAATGAGTCTGAGGTTAAGTTAGGGAGTGATGTTAATGGTGGTTTGAAGACTGTGAAGGAAGTGGTTCCTGTTAATAATCAATGTTCTAAGATTGTTTTGGAGAAGAAGCCTGATCAGGTTTCTGAGAATGGTGGTGCTCCTTTGGCTAAGGCACAAGTTGTGGGTTGGCCACCAATTCGATCCTTCAGGAAAAACACCATGACGTCTACCAATTCGACAAAGAACGCTGATGAAGCCGAGGGAAAATCGGGATCAACCAGTTGCCTATATGTAAAAGTTAGCATGGAAGGTGCTCCATATCTTAGGAAGGTTGATCTCAAACTGTACAAAAACTACTCTGAACTTTCATTGGCTCTGGAGAAGATGTTTAGCTGCTTCACTATTGGGAAGTGTGGTACTGAAGGGCTTCCAACTAAAGAGAGTCTGAGTGAAAGTAATTTGAAGGATTTCCTCCATGGATCTGAGTATGTGCTGACATATGAAGATAAAGATGGAGATTGGATGCTGGTTGGTGATGTCCCTTGGGAGATGTTCACTGATGCATGTAAAAGACTCCGAATCATGAAAGGTTCTGAAGCAATTGGGCTAGGTAGGTTGAGCGCCAAGGGCCGTAGAGAAGTGCAAGAACCGAAACTAGCATGATGAAGTCTCAAGCAAGACGTTGAAGACGACATCTCCTCGGATTGTGAAAGCCCTTTTCTTTAAAATTATATTATTGTTCATTTTGTTACAAACTAATGTTGTATCTTATGAAATGCTAACATTTTCCTCGTGTGTTCAATGGTAATTGTTATTGCTGAATCCTATGAGTCTGGTTGCATTTTCATAGCTCTCTGTCTTCTTTCCTTTTATACAACAAACACACAAAAAAGACACCATTCAAATCACTTTCATTTCAGTACCTTAATACGATGCTAAGCTCGATAACGTTAATGCATCACATAACCCAAACAATCATGCACAAAGTAGACATTAGAAACAACTCGAAACATGCTGTATCATCGCGAGAAAGAAGGAAGAGGACGAGCATCAGTGGGTGAAGGGAGGAAGAGGAAGCGTGTTATCTGCAAGAGGTGTTGGCTGGTGAAGATGGGCGACATCGGTCTGCAGCAGAAGCTCGATAACATCGAGGCATCACATAAACAAAACAATCATGCACAAAGGAGAAACTAAGAACAACTCAAATCAAGCTCTATTATCTCGAGAAAGCAGGAAGAGGAGGAGCATCAGCATCTGCAGCAAGAAAAGGAAGCTTGTTAACTGGCAGAGGTGTTGGTCGGTGAAGATGTGCAGCATCGGTCTGCAGTGGAAACTCGAAGGGGGAGATCGGGATTCAGGTTGTGGTGTTGTCGATGACGGTAGACGTAGAAGAAGCAAGGGAGGAGGTAGCTTGTTATCTAGTAGATGTGTTGGTTGGTGAAGATGTGCGACGTCGGTCTGCGGCGGAAGCACGACGAGGGGATCGGGATTCGGGCTGTGGCGTTGTCGACGACGGTAGTGGTAGAAGAAGAGAGGGAGTAGGTGGCTTGTTATCAGGAAAAGGTGTTGGTTGGTGAAGATGGTCGACGTCGGGCTGCAGTGGAAGCTCGACGGGGGGATCGGGACACGGGTCGTGGCGTTGTCGACGACGGTGTCGGTAGAGTAAGCGAGGGAGGAGGTAGCAGAGGAGGCGGAGAGAGGAGAGAATGGCAATGAGGAGTAAAGCTGACAGAAGATAGTCCGTGGGGGAGCGAGCTCTTTTGCAGCCAAATAATATTCCAAGACAAACCATGGCTAAGAGAGAAAGGGGAAGGGGGGGTTCTGACTTGGCCTCTGCAGTGGCTGTCAATTAAAATAGAGAAACAGAAATGTAAGTTTTTTTTTTGGTTCTTTTCTTGTTCAAACAATGAAAGTAGCAG

Coding sequence (CDS)

ATGTCTAATTTCGTAGATTCTTCTTCTTGTTCTTCGCCTGTTCATGAGGAGAAGAAATGTGGGTCTGTGAGTTTCAAGGACACTGAATTGAGGCTTGGATTGCCTGGTTCTCAGTCTCCTGAGAGGAAATTGGGAAATGGGGTTTTGTTATTTTGTAAGGATTTTGAGGAAAAACAGAGTAATGGGTTGTCTTCTTCTTCTTCTTCTTGTGGTTTGAAGAATTTTGTTTCTGGGTTTAAGAGGGGTTTTTCTGATGCCATTGATGGTTCTGTGAAATGGGGTTTCTGTAATGAGTCTGAGGTTAAGTTAGGGAGTGATGTTAATGGTGGTTTGAAGACTGTGAAGGAAGTGGTTCCTGTTAATAATCAATGTTCTAAGATTGTTTTGGAGAAGAAGCCTGATCAGGTTTCTGAGAATGGTGGTGCTCCTTTGGCTAAGGCACAAGTTGTGGGTTGGCCACCAATTCGATCCTTCAGGAAAAACACCATGACGTCTACCAATTCGACAAAGAACGCTGATGAAGCCGAGGGAAAATCGGGATCAACCAGTTGCCTATATGTAAAAGTTAGCATGGAAGGTGCTCCATATCTTAGGAAGGTTGATCTCAAACTGTACAAAAACTACTCTGAACTTTCATTGGCTCTGGAGAAGATGTTTAGCTGCTTCACTATTGGGAAGTGTGGTACTGAAGGGCTTCCAACTAAAGAGAGTCTGAGTGAAAGTAATTTGAAGGATTTCCTCCATGGATCTGAGTATGTGCTGACATATGAAGATAAAGATGGAGATTGGATGCTGGTTGGTGATGTCCCTTGGGAGATGTTCACTGATGCATGTAAAAGACTCCGAATCATGAAAGGTTCTGAAGCAATTGGGCTAGGTAGGTTGAGCGCCAAGGGCCGTAGAGAAGTGCAAGAACCGAAACTAGCATGA

Protein sequence

MSNFVDSSSCSSPVHEEKKCGSVSFKDTELRLGLPGSQSPERKLGNGVLLFCKDFEEKQSNGLSSSSSSCGLKNFVSGFKRGFSDAIDGSVKWGFCNESEVKLGSDVNGGLKTVKEVVPVNNQCSKIVLEKKPDQVSENGGAPLAKAQVVGWPPIRSFRKNTMTSTNSTKNADEAEGKSGSTSCLYVKVSMEGAPYLRKVDLKLYKNYSELSLALEKMFSCFTIGKCGTEGLPTKESLSESNLKDFLHGSEYVLTYEDKDGDWMLVGDVPWEMFTDACKRLRIMKGSEAIGLGRLSAKGRREVQEPKLA

Homology

[Close]

BLAST of Sed0021487 vs. NCBI nr
Match: XP_022151565.1 (auxin-responsive protein IAA27-like [Momordica charantia])

HSP 1 Score: 429.5 bits (1103), Expect = 2.5e-116
Identity = 240/313 (76.68%), Postives = 250/313 (79.87%), Query Frame = 0


Query: 7   SSSCSSP-----VHEEKKCGSVSFKDTELRLGLPGSQSPERKLGNGVLLFCKDFEEKQSN 66
           SSS SSP      +EEKKC +VSFKDTELRLGLPGSQSPERK G G+ LF KDFE+KQSN
Sbjct: 29  SSSSSSPPSSNVTNEEKKCATVSFKDTELRLGLPGSQSPERKSGTGISLFGKDFEDKQSN 88

Query: 67  GLSSSSSSCGLKNFVSGFKRGFSDAIDG-SVKWGFC--NESEVK---------------- 126
           G    SSSC LKN VSG KRGFSDAIDG S KW F   N SEVK                
Sbjct: 89  GY---SSSCPLKNLVSGSKRGFSDAIDGSSAKWVFSGGNGSEVKLGEGAVLFSPKSGKPP 148

Query: 127 ---LGSDVNGGLKTVKEVVPVNNQCSKIVLEKKPDQVSENGGAPLAKAQVVGWPPIRSFR 186
              LGS+VN   +  KEV PV  Q SK   EKKP QVSEN GAPLAKAQVVGWPPIRSFR
Sbjct: 149 IGGLGSNVNAS-QPQKEVHPV-PQSSKPAQEKKP-QVSENAGAPLAKAQVVGWPPIRSFR 208

Query: 187 KNTMTSTNSTKNADEAEGKSGSTSCLYVKVSMEGAPYLRKVDLKLYKNYSELSLALEKMF 246
           KNTMTS+NSTKNADEAE KSGS+SCLYVKVSMEGAPYLRKVDLKLY NYSELSLALEKMF
Sbjct: 209 KNTMTSSNSTKNADEAEEKSGSSSCLYVKVSMEGAPYLRKVDLKLYSNYSELSLALEKMF 268

Query: 247 SCFTIGKCGTEGLPTKESLSESNLKDFLHGSEYVLTYEDKDGDWMLVGDVPWEMFTDACK 293
           SCFTIG+CGTEGLPTKE LSESNLKDFLHGSEYVLTYEDKDGDWMLVGDVPWEMFTD C+
Sbjct: 269 SCFTIGQCGTEGLPTKEGLSESNLKDFLHGSEYVLTYEDKDGDWMLVGDVPWEMFTDTCR 328

[Close]

BLAST of Sed0021487 vs. NCBI nr
Match: XP_038899516.1 (auxin-responsive protein IAA21-like [Benincasa hispida])

HSP 1 Score: 423.7 bits (1088), Expect = 1.4e-114
Identity = 235/313 (75.08%), Postives = 249/313 (79.55%), Query Frame = 0


Query: 7   SSSCSSPVHEEKKCGSVSFKDTELRLGLPGSQSPERKLGNGVLLFCKDFEEKQSNGLSSS 66
           SSS S   +E+KKC +VSFKDTELRLGLPGSQSPERKLG+G+ LF  D E++QSNG  SS
Sbjct: 33  SSSSSLVTNEDKKCVTVSFKDTELRLGLPGSQSPERKLGSGISLFGNDSEDEQSNGF-SS 92

Query: 67  SSSCGLKNFVSGFKRGFSDAIDG-SVKWGFC--NESEVK-------------------LG 126
           +    LKN VSG KRGFSDAIDG S KW F   N SEVK                   LG
Sbjct: 93  ACPLNLKNLVSGSKRGFSDAIDGSSAKWVFSGNNRSEVKLSEGAVLFSPKSGKPAIGGLG 152

Query: 127 SDVNG-----GLKTVKEVVPVNNQCSKIVLEKKPDQVSENGGAPLAKAQVVGWPPIRSFR 186
           S+VN       LK VKEV+PV  Q S  V EKKP QVSENGGAPLAKAQVVGWPPIRSFR
Sbjct: 153 SNVNAPQSCVTLKAVKEVLPV-PQSSNPVQEKKP-QVSENGGAPLAKAQVVGWPPIRSFR 212

Query: 187 KNTMTSTNSTKNADEAEGKSGSTSCLYVKVSMEGAPYLRKVDLKLYKNYSELSLALEKMF 246
           KNTMTSTNSTKN DE EGKSGS+ CLYVKVSMEGAPYLRKVDLKLY NYSELSLALEKMF
Sbjct: 213 KNTMTSTNSTKNTDEGEGKSGSSGCLYVKVSMEGAPYLRKVDLKLYSNYSELSLALEKMF 272

Query: 247 SCFTIGKCGTEGLPTKESLSESNLKDFLHGSEYVLTYEDKDGDWMLVGDVPWEMFTDACK 293
           SCFTIG+CGTEGLPTKE LSESNLKDFLHGSEYVLT EDKDGDWMLVGDVPWEMFTD+C+
Sbjct: 273 SCFTIGQCGTEGLPTKERLSESNLKDFLHGSEYVLTCEDKDGDWMLVGDVPWEMFTDSCR 332

[Close]

BLAST of Sed0021487 vs. NCBI nr
Match: XP_023548069.1 (auxin-responsive protein IAA27-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 421.0 bits (1081), Expect = 8.8e-114
Identity = 233/312 (74.68%), Postives = 246/312 (78.85%), Query Frame = 0


Query: 2   SNFVDSSSCSSP---VHEEKKCGSVSFKDTELRLGLPGSQSPERKLGNGVLLFCKDFEEK 61
           S+   S+S SSP    +EEK C +VSFKDTELRLGLPG QSPERK G G+ LF  DFE+K
Sbjct: 26  SSSSSSASSSSPPPGTNEEKNCATVSFKDTELRLGLPGFQSPERKSGTGISLFGNDFEDK 85

Query: 62  QSNGLSSSSSSCGLKNFVSGFKRGFSDAIDG-SVKWGFCNESEVKLG------------S 121
           QSNG  SS     LKN VSG KRGFSDAIDG SVKWGF   + +  G            S
Sbjct: 86  QSNGFCSSRI---LKNLVSGSKRGFSDAIDGSSVKWGFSGSNGLSEGTMLFSPKSGMPPS 145

Query: 122 DVN-----GGLKTVKEVVPVNNQCSKIVLEKKPDQVSENGGAPLAKAQVVGWPPIRSFRK 181
           +VN     G LK VKEVVPV  Q SK   EKKP QVSENGGAPLAKAQVVGWPPIRSFRK
Sbjct: 146 NVNAPQACGSLKAVKEVVPV-KQSSKPAQEKKP-QVSENGGAPLAKAQVVGWPPIRSFRK 205

Query: 182 NTMTSTNSTKNADEAEGKSGSTSCLYVKVSMEGAPYLRKVDLKLYKNYSELSLALEKMFS 241
           +TMTSTNSTK ADEAEGKS  T CLYVKVSMEGAPYLRKVDLKL  NYSELSLALEKMFS
Sbjct: 206 STMTSTNSTKKADEAEGKSELTGCLYVKVSMEGAPYLRKVDLKLCSNYSELSLALEKMFS 265

Query: 242 CFTIGKCGTEGLPTKESLSESNLKDFLHGSEYVLTYEDKDGDWMLVGDVPWEMFTDACKR 293
           CFTIG+CGTEGLPTKE LSESNL DFLHGSEYVLTYEDKDGDWMLVGDVPWEMFTD+C+R
Sbjct: 266 CFTIGQCGTEGLPTKERLSESNLTDFLHGSEYVLTYEDKDGDWMLVGDVPWEMFTDSCRR 325

[Close]

BLAST of Sed0021487 vs. NCBI nr
Match: XP_022954003.1 (auxin-responsive protein IAA27-like [Cucurbita moschata] >KAG6575526.1 Auxin-responsive protein IAA27, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 420.6 bits (1080), Expect = 1.2e-113
Identity = 232/311 (74.60%), Postives = 246/311 (79.10%), Query Frame = 0


Query: 2   SNFVDSSSCSSP--VHEEKKCGSVSFKDTELRLGLPGSQSPERKLGNGVLLFCKDFEEKQ 61
           S+   S+S SSP   +EEKKC +VSFKDTELRLGLPG QSPERK G G+ LF  DFE+KQ
Sbjct: 26  SSSSSSASSSSPPGTNEEKKCATVSFKDTELRLGLPGFQSPERKSGTGISLFSNDFEDKQ 85

Query: 62  SNGLSSSSSSCGLKNFVSGFKRGFSDAIDG-SVKWGFCNESEVKLG------------SD 121
           SNG  SS     LKN VSG KRGFSDAIDG S+KWGF   + +  G            S+
Sbjct: 86  SNGFCSSRI---LKNLVSGSKRGFSDAIDGSSLKWGFSGSNGLSEGTMLFSPKSGMPPSN 145

Query: 122 VN-----GGLKTVKEVVPVNNQCSKIVLEKKPDQVSENGGAPLAKAQVVGWPPIRSFRKN 181
           VN     G LK VKEVVPV    SK   EKKP QVSENGGAPLAKAQVVGWPPIRSFRK+
Sbjct: 146 VNAPQACGSLKAVKEVVPV-KPSSKPAQEKKP-QVSENGGAPLAKAQVVGWPPIRSFRKS 205

Query: 182 TMTSTNSTKNADEAEGKSGSTSCLYVKVSMEGAPYLRKVDLKLYKNYSELSLALEKMFSC 241
           TMTSTNSTK ADEAEGKS  T CLYVKVSMEGAPYLRKVDLKL  NYSELSLALEKMFSC
Sbjct: 206 TMTSTNSTKKADEAEGKSELTGCLYVKVSMEGAPYLRKVDLKLCSNYSELSLALEKMFSC 265

Query: 242 FTIGKCGTEGLPTKESLSESNLKDFLHGSEYVLTYEDKDGDWMLVGDVPWEMFTDACKRL 293
           FTIG+CGTEGLPTKE LSESNL DFLHGSEYVLTYEDKDGDWMLVGDVPWEMFTD+C+RL
Sbjct: 266 FTIGQCGTEGLPTKERLSESNLTDFLHGSEYVLTYEDKDGDWMLVGDVPWEMFTDSCRRL 325

[Close]

BLAST of Sed0021487 vs. NCBI nr
Match: XP_004141756.1 (auxin-responsive protein IAA21 [Cucumis sativus] >KGN45391.1 hypothetical protein Csa_016029 [Cucumis sativus])

HSP 1 Score: 419.5 bits (1077), Expect = 2.6e-113
Identity = 232/313 (74.12%), Postives = 245/313 (78.27%), Query Frame = 0


Query: 7   SSSCSSPVHEEKKCGSVSFKDTELRLGLPGSQSPERKLGNGVLLFCKDFEEKQSNGLSSS 66
           S SCS   +EEKKC +VSFKDTELRLGLPGSQSPERK G+ +  F  DFE+KQSNG  SS
Sbjct: 35  SDSCSHVTNEEKKCATVSFKDTELRLGLPGSQSPERKSGSEISFFGNDFEDKQSNGF-SS 94

Query: 67  SSSCGLKNFVSGFKRGFSDAIDG-SVKWGF--CNESEVK-------------------LG 126
                LKN VSG KRGFSDAIDG S KW F   N SEVK                   LG
Sbjct: 95  PCPLNLKNLVSGSKRGFSDAIDGSSAKWVFSGSNGSEVKLGEGAVLFSPKSGKPTIGGLG 154

Query: 127 SDVNG-----GLKTVKEVVPVNNQCSKIVLEKKPDQVSENGGAPLAKAQVVGWPPIRSFR 186
           S+VN       LK VKEV+PV  Q S  V EKKP QVSENGGAPLAKAQVVGWPPIRSFR
Sbjct: 155 SNVNTPQSCVTLKAVKEVLPV-PQSSNSVQEKKP-QVSENGGAPLAKAQVVGWPPIRSFR 214

Query: 187 KNTMTSTNSTKNADEAEGKSGSTSCLYVKVSMEGAPYLRKVDLKLYKNYSELSLALEKMF 246
           KNTMT+TNSTKN DE EGKSGS+ CLYVKVSMEGAPYLRKVDLKLY NYSELSLALEKMF
Sbjct: 215 KNTMTTTNSTKNTDEGEGKSGSSGCLYVKVSMEGAPYLRKVDLKLYSNYSELSLALEKMF 274

Query: 247 SCFTIGKCGTEGLPTKESLSESNLKDFLHGSEYVLTYEDKDGDWMLVGDVPWEMFTDACK 293
           SCFTIG+CGTEGLPTKE LSESN KDFLHGSEYVLT EDKDGDWMLVGDVPWEMFT++C+
Sbjct: 275 SCFTIGQCGTEGLPTKERLSESNSKDFLHGSEYVLTCEDKDGDWMLVGDVPWEMFTESCR 334

[Close]

BLAST of Sed0021487 vs. ExPASy Swiss-Prot
Match: Q38826 (Auxin-responsive protein IAA8 OS=Arabidopsis thaliana OX=3702 GN=IAA8 PE=1 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 3.1e-69
Identity = 155/298 (52.01%), Postives = 194/298 (65.10%), Query Frame = 0


Query: 3   NFVDSSSC----SSPVHEEKKCGSVSFKDTELRLGLPGSQSPERKLGNGVLLFCKDFEEK 62
           N++  S C    SS +       +++FK TELRLGLP SQSPER+   G LL  +  +EK
Sbjct: 23  NYLGLSDCSSVDSSTIPNVVGKSNLNFKATELRLGLPESQSPERETDFG-LLSPRTPDEK 82

Query: 63  QSNGL----SSSSSSCGLKNFVSGFKRGFSDAIDGSVKWGFCNESEVKLGSDVNGGLKTV 122
               L     + S++ G KN VSG KRGF+D  D          S VK      GG+  +
Sbjct: 83  LLFPLLPSKDNGSATTGHKNVVSGNKRGFADTWD--------EFSGVKGSVRPGGGINMM 142

Query: 123 KEVVPVNNQCSKIVLEKKPDQVSENGGAPLAKAQVVGWPPIRSFRKNTMTSTNSTKNADE 182
             + P     SK + E++         AP AKAQVVGWPPIRS+RKNTM S+ S KN DE
Sbjct: 143 --LSPKVKDVSKSIQEERSHAKGGLNNAPAAKAQVVGWPPIRSYRKNTMASSTS-KNTDE 202

Query: 183 AEGKSGSTSCLYVKVSMEGAPYLRKVDLKLYKNYSELSLALEKMFSCFTIGKCGTEGLPT 242
            +GK G    L+VKVSM+GAPYLRKVDL+ Y +Y +LS ALEKMFSCFT+G+CG  G   
Sbjct: 203 VDGKPG-LGVLFVKVSMDGAPYLRKVDLRTYTSYQQLSSALEKMFSCFTLGQCGLHGAQG 262

Query: 243 KESLSESNLKDFLHGSEYVLTYEDKDGDWMLVGDVPWEMFTDACKRLRIMKGSEAIGL 293
           +E +SE  LKD LHGSE+VLTYEDKDGDWMLVGDVPWE+FT+ C++L+IMKGS++IGL
Sbjct: 263 RERMSEIKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEIFTETCQKLKIMKGSDSIGL 307

[Close]

BLAST of Sed0021487 vs. ExPASy Swiss-Prot
Match: Q9ZSY8 (Auxin-responsive protein IAA27 OS=Arabidopsis thaliana OX=3702 GN=IAA27 PE=1 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 1.1e-66
Identity = 153/294 (52.04%), Postives = 181/294 (61.56%), Query Frame = 0


Query: 5   VDSSSCSSPVHEEKKCGSVSFKDTELRLGLPGSQSPERKLGNGVLLFCKDFEEKQSNGLS 64
           +++++ S           ++FK TELRLGLPGS+SPER                 S  L+
Sbjct: 20  MEATTMSDKTKTRDNNNGLNFKATELRLGLPGSESPER---------------VDSRFLA 79

Query: 65  SSSSSCGLKNFVSGFKRGFSDAIDGSVKWGFCNESEVKLGSDVNGGLKTVKEVVPVNNQC 124
            + SSC     VSG KR FSDAI+ S KW F   S    G DV  G      VV      
Sbjct: 80  LNKSSCP----VSGAKRVFSDAINDSNKWVFSPGSTTATG-DVGSGSGPRTSVVKDGKST 139

Query: 125 SKIVLEKKPDQVSENGGAPLAKAQVVGWPPIRSFRKNTMTSTNSTK-----NADEAEGKS 184
           +         +   +  AP +KAQVVGWPPIRSFRKN+M S+ S K       +EAE KS
Sbjct: 140 TFTKPAVPVKEKKSSATAPASKAQVVGWPPIRSFRKNSMASSQSQKPGNNSETEEAEAKS 199

Query: 185 G-STSCLYVKVSMEGAPYLRKVDLKLYKNYSELSLALEKMFSCFTIGKCGTEGLPTKESL 244
           G    CLYVKVSMEGAPYLRK+DLK YK+Y ELS ALEKMFSCFTIG+ G+ G   ++ L
Sbjct: 200 GPEQPCLYVKVSMEGAPYLRKIDLKTYKSYLELSSALEKMFSCFTIGQFGSHGGCGRDGL 259

Query: 245 SESNLKDFLHGSEYVLTYEDKDGDWMLVGDVPWEMFTDACKRLRIMKGSEAIGL 293
           +ES L D L GSEYV+TYEDKD DWMLVGDVPWEMF  +CK+LRIMK SEAIGL
Sbjct: 260 NESRLTDLLRGSEYVVTYEDKDSDWMLVGDVPWEMFICSCKKLRIMKSSEAIGL 293

[Close]

BLAST of Sed0021487 vs. ExPASy Swiss-Prot
Match: Q38827 (Auxin-responsive protein IAA9 OS=Arabidopsis thaliana OX=3702 GN=IAA9 PE=1 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 1.6e-65
Identity = 148/301 (49.17%), Postives = 187/301 (62.13%), Query Frame = 0


Query: 3   NFVDSSSCS-------SPVHEEKKCGSVSFKDTELRLGLPGSQSPERKLGNGVLLFCKDF 62
           N++  S CS       SP+ E+ K  ++S K TEL LGLPGSQSP R     +L   K  
Sbjct: 35  NYLGLSDCSSVGSSTLSPLAEDDK-ATISLKATELTLGLPGSQSPARDTELNLLSPAKLD 94

Query: 63  EEKQSNGLSSSSSSC--GLKNFVSGFKRGFSDAID--GSVKWGFCNESEVKLGSDVNGGL 122
           E+     L S    C    KN  SG KRGFSD +D     K     E    +  +     
Sbjct: 95  EKPFFPLLPSKDEICSSSQKNNASGNKRGFSDTMDQFAEAKSSVYTEKN-WMFPEAAATQ 154

Query: 123 KTVKEVVPVNNQCSKIVLEKKPDQVSENGGAPLAKAQVVGWPPIRSFRKNTMTSTNSTKN 182
              K+ VP N      + + +    + +   P AKAQ+VGWPP+RS+RKNT+ +T   KN
Sbjct: 155 SVTKKDVPQN------IPKGQSSTTNNSSSPPAAKAQIVGWPPVRSYRKNTLATT--CKN 214

Query: 183 ADEAEGKSGSTSCLYVKVSMEGAPYLRKVDLKLYKNYSELSLALEKMFSCFTIGKCGTEG 242
           +DE +G+ GS   L+VKVSM+GAPYLRKVDL+ Y NY ELS ALEKMF+ FT+G+CG+ G
Sbjct: 215 SDEVDGRPGS-GALFVKVSMDGAPYLRKVDLRSYTNYGELSSALEKMFTTFTLGQCGSNG 274

Query: 243 LPTKESLSESNLKDFLHGSEYVLTYEDKDGDWMLVGDVPWEMFTDACKRLRIMKGSEAIG 293
              K+ LSE+ LKD L+G +YVLTYEDKDGDWMLVGDVPWEMF D CK+L+IMKG +AIG
Sbjct: 275 AAGKDMLSETKLKDLLNGKDYVLTYEDKDGDWMLVGDVPWEMFIDVCKKLKIMKGCDAIG 324

[Close]

BLAST of Sed0021487 vs. ExPASy Swiss-Prot
Match: Q5Z749 (Auxin-responsive protein IAA21 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA21 PE=2 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 2.3e-56
Identity = 130/267 (48.69%), Postives = 158/267 (59.18%), Query Frame = 0


Query: 28  TELRLGLPGSQSPERKLGNGVLLFCKDFEEKQSNGLSSSSSSCGLKNFVSGFKRGFSDAI 87
           TELRLGLPG+       G G              G  ++  +  L     G KRGF+DAI
Sbjct: 22  TELRLGLPGTAEEAESEGGG------------GGGTDAAPLTLELLP-KGGAKRGFADAI 81

Query: 88  DGSVKWGFCNESEVKLGSDVNGGLKTVKEVVPVNNQCSKIVLEKKPDQVSENGGAPLAKA 147
                              V G     +E      + +    E + ++  +   AP AKA
Sbjct: 82  -------------------VGGPAGQRREA--AGGKAAAAAAEAEEEEEKKKAQAPAAKA 141

Query: 148 QVVGWPPIRSFRKNTMT-STNSTKNADEAEGKSGSTS-CLYVKVSMEGAPYLRKVDLKLY 207
           QVVGWPPIRS+RKNTM  S  + K  D+ E K    S CLYVKVSM+GAPYLRKVDLK+Y
Sbjct: 142 QVVGWPPIRSYRKNTMAMSQPALKGKDDGEAKQAPASGCLYVKVSMDGAPYLRKVDLKMY 201

Query: 208 KNYSELSLALEKMFSCFTIGKCGTEGLPTKESLSESNLKDFLHGSEYVLTYEDKDGDWML 267
           KNY ELSLALEKMFSCFT+G   + G   ++ LS+  L D  +G+E VLTYEDKD DWML
Sbjct: 202 KNYKELSLALEKMFSCFTVGHGESNGKSGRDGLSDCRLMDLKNGTELVLTYEDKDEDWML 254

Query: 268 VGDVPWEMFTDACKRLRIMKGSEAIGL 293
           VGDVPW MFTD+C+RLRIMKGS+A+GL
Sbjct: 262 VGDVPWRMFTDSCRRLRIMKGSDAVGL 254

[Close]

BLAST of Sed0021487 vs. ExPASy Swiss-Prot
Match: O24407 (Auxin-responsive protein IAA16 OS=Arabidopsis thaliana OX=3702 GN=IAA16 PE=1 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 4.8e-54
Identity = 132/282 (46.81%), Postives = 164/282 (58.16%), Query Frame = 0


Query: 23  VSFKDTELRLGLPGSQSPERKLGNGVLLFCKDFEEKQSNGLSSSSSSCGLKNFVSGFKRG 82
           ++F+ TELRLGLPG        G             ++NG                 KRG
Sbjct: 2   INFEATELRLGLPGGNHGGEMAG-------------KNNG-----------------KRG 61

Query: 83  FSDAIDGSVKWGFCNESEVKLGSDVNGGLKTVKEVVPVNNQCSKIVLEKKPDQVSENGGA 142
           FS+ +D  +     N S   + S                   SK+ LE   ++V +    
Sbjct: 62  FSETVDLKL-----NLSSTAMDS------------------VSKVDLENMKEKVVK---- 121

Query: 143 PLAKAQVVGWPPIRSFRKNTM-----TSTNSTKNADEAEGKSGSTS-------CLYVKVS 202
           P AKAQVVGWPP+RSFRKN M     T+ ++T+  D+  G SG+TS         YVKVS
Sbjct: 122 PPAKAQVVGWPPVRSFRKNVMSGQKPTTGDATEGNDKTSGSSGATSSASACATVAYVKVS 181

Query: 203 MEGAPYLRKVDLKLYKNYSELSLALEKMFSCFTIGKCGTEGLPTKESLSESNLKDFLHGS 262
           M+GAPYLRK+DLKLYK Y +LS AL KMFS FTIG  G +G+  K+ ++ES L D L+GS
Sbjct: 182 MDGAPYLRKIDLKLYKTYQDLSNALSKMFSSFTIGNYGPQGM--KDFMNESKLIDLLNGS 224

Query: 263 EYVLTYEDKDGDWMLVGDVPWEMFTDACKRLRIMKGSEAIGL 293
           +YV TYEDKDGDWMLVGDVPWEMF D+CKR+RIMKGSEAIGL
Sbjct: 242 DYVPTYEDKDGDWMLVGDVPWEMFVDSCKRIRIMKGSEAIGL 224

[Close]

BLAST of Sed0021487 vs. ExPASy TrEMBL
Match: A0A6J1DBJ4 (Auxin-responsive protein OS=Momordica charantia OX=3673 GN=LOC111019475 PE=3 SV=1)

HSP 1 Score: 429.5 bits (1103), Expect = 1.2e-116
Identity = 240/313 (76.68%), Postives = 250/313 (79.87%), Query Frame = 0


Query: 7   SSSCSSP-----VHEEKKCGSVSFKDTELRLGLPGSQSPERKLGNGVLLFCKDFEEKQSN 66
           SSS SSP      +EEKKC +VSFKDTELRLGLPGSQSPERK G G+ LF KDFE+KQSN
Sbjct: 29  SSSSSSPPSSNVTNEEKKCATVSFKDTELRLGLPGSQSPERKSGTGISLFGKDFEDKQSN 88

Query: 67  GLSSSSSSCGLKNFVSGFKRGFSDAIDG-SVKWGFC--NESEVK---------------- 126
           G    SSSC LKN VSG KRGFSDAIDG S KW F   N SEVK                
Sbjct: 89  GY---SSSCPLKNLVSGSKRGFSDAIDGSSAKWVFSGGNGSEVKLGEGAVLFSPKSGKPP 148

Query: 127 ---LGSDVNGGLKTVKEVVPVNNQCSKIVLEKKPDQVSENGGAPLAKAQVVGWPPIRSFR 186
              LGS+VN   +  KEV PV  Q SK   EKKP QVSEN GAPLAKAQVVGWPPIRSFR
Sbjct: 149 IGGLGSNVNAS-QPQKEVHPV-PQSSKPAQEKKP-QVSENAGAPLAKAQVVGWPPIRSFR 208

Query: 187 KNTMTSTNSTKNADEAEGKSGSTSCLYVKVSMEGAPYLRKVDLKLYKNYSELSLALEKMF 246
           KNTMTS+NSTKNADEAE KSGS+SCLYVKVSMEGAPYLRKVDLKLY NYSELSLALEKMF
Sbjct: 209 KNTMTSSNSTKNADEAEEKSGSSSCLYVKVSMEGAPYLRKVDLKLYSNYSELSLALEKMF 268

Query: 247 SCFTIGKCGTEGLPTKESLSESNLKDFLHGSEYVLTYEDKDGDWMLVGDVPWEMFTDACK 293
           SCFTIG+CGTEGLPTKE LSESNLKDFLHGSEYVLTYEDKDGDWMLVGDVPWEMFTD C+
Sbjct: 269 SCFTIGQCGTEGLPTKEGLSESNLKDFLHGSEYVLTYEDKDGDWMLVGDVPWEMFTDTCR 328

[Close]

BLAST of Sed0021487 vs. ExPASy TrEMBL
Match: A0A6J1GPX2 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111456393 PE=3 SV=1)

HSP 1 Score: 420.6 bits (1080), Expect = 5.6e-114
Identity = 232/311 (74.60%), Postives = 246/311 (79.10%), Query Frame = 0


Query: 2   SNFVDSSSCSSP--VHEEKKCGSVSFKDTELRLGLPGSQSPERKLGNGVLLFCKDFEEKQ 61
           S+   S+S SSP   +EEKKC +VSFKDTELRLGLPG QSPERK G G+ LF  DFE+KQ
Sbjct: 26  SSSSSSASSSSPPGTNEEKKCATVSFKDTELRLGLPGFQSPERKSGTGISLFSNDFEDKQ 85

Query: 62  SNGLSSSSSSCGLKNFVSGFKRGFSDAIDG-SVKWGFCNESEVKLG------------SD 121
           SNG  SS     LKN VSG KRGFSDAIDG S+KWGF   + +  G            S+
Sbjct: 86  SNGFCSSRI---LKNLVSGSKRGFSDAIDGSSLKWGFSGSNGLSEGTMLFSPKSGMPPSN 145

Query: 122 VN-----GGLKTVKEVVPVNNQCSKIVLEKKPDQVSENGGAPLAKAQVVGWPPIRSFRKN 181
           VN     G LK VKEVVPV    SK   EKKP QVSENGGAPLAKAQVVGWPPIRSFRK+
Sbjct: 146 VNAPQACGSLKAVKEVVPV-KPSSKPAQEKKP-QVSENGGAPLAKAQVVGWPPIRSFRKS 205

Query: 182 TMTSTNSTKNADEAEGKSGSTSCLYVKVSMEGAPYLRKVDLKLYKNYSELSLALEKMFSC 241
           TMTSTNSTK ADEAEGKS  T CLYVKVSMEGAPYLRKVDLKL  NYSELSLALEKMFSC
Sbjct: 206 TMTSTNSTKKADEAEGKSELTGCLYVKVSMEGAPYLRKVDLKLCSNYSELSLALEKMFSC 265

Query: 242 FTIGKCGTEGLPTKESLSESNLKDFLHGSEYVLTYEDKDGDWMLVGDVPWEMFTDACKRL 293
           FTIG+CGTEGLPTKE LSESNL DFLHGSEYVLTYEDKDGDWMLVGDVPWEMFTD+C+RL
Sbjct: 266 FTIGQCGTEGLPTKERLSESNLTDFLHGSEYVLTYEDKDGDWMLVGDVPWEMFTDSCRRL 325

[Close]

BLAST of Sed0021487 vs. ExPASy TrEMBL
Match: A0A0A0KC72 (Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_7G447060 PE=3 SV=1)

HSP 1 Score: 419.5 bits (1077), Expect = 1.2e-113
Identity = 232/313 (74.12%), Postives = 245/313 (78.27%), Query Frame = 0


Query: 7   SSSCSSPVHEEKKCGSVSFKDTELRLGLPGSQSPERKLGNGVLLFCKDFEEKQSNGLSSS 66
           S SCS   +EEKKC +VSFKDTELRLGLPGSQSPERK G+ +  F  DFE+KQSNG  SS
Sbjct: 35  SDSCSHVTNEEKKCATVSFKDTELRLGLPGSQSPERKSGSEISFFGNDFEDKQSNGF-SS 94

Query: 67  SSSCGLKNFVSGFKRGFSDAIDG-SVKWGF--CNESEVK-------------------LG 126
                LKN VSG KRGFSDAIDG S KW F   N SEVK                   LG
Sbjct: 95  PCPLNLKNLVSGSKRGFSDAIDGSSAKWVFSGSNGSEVKLGEGAVLFSPKSGKPTIGGLG 154

Query: 127 SDVNG-----GLKTVKEVVPVNNQCSKIVLEKKPDQVSENGGAPLAKAQVVGWPPIRSFR 186
           S+VN       LK VKEV+PV  Q S  V EKKP QVSENGGAPLAKAQVVGWPPIRSFR
Sbjct: 155 SNVNTPQSCVTLKAVKEVLPV-PQSSNSVQEKKP-QVSENGGAPLAKAQVVGWPPIRSFR 214

Query: 187 KNTMTSTNSTKNADEAEGKSGSTSCLYVKVSMEGAPYLRKVDLKLYKNYSELSLALEKMF 246
           KNTMT+TNSTKN DE EGKSGS+ CLYVKVSMEGAPYLRKVDLKLY NYSELSLALEKMF
Sbjct: 215 KNTMTTTNSTKNTDEGEGKSGSSGCLYVKVSMEGAPYLRKVDLKLYSNYSELSLALEKMF 274

Query: 247 SCFTIGKCGTEGLPTKESLSESNLKDFLHGSEYVLTYEDKDGDWMLVGDVPWEMFTDACK 293
           SCFTIG+CGTEGLPTKE LSESN KDFLHGSEYVLT EDKDGDWMLVGDVPWEMFT++C+
Sbjct: 275 SCFTIGQCGTEGLPTKERLSESNSKDFLHGSEYVLTCEDKDGDWMLVGDVPWEMFTESCR 334

[Close]

BLAST of Sed0021487 vs. ExPASy TrEMBL
Match: A0A6J1JVE5 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111488670 PE=3 SV=1)

HSP 1 Score: 419.1 bits (1076), Expect = 1.6e-113
Identity = 232/311 (74.60%), Postives = 245/311 (78.78%), Query Frame = 0


Query: 2   SNFVDSSSCSSP--VHEEKKCGSVSFKDTELRLGLPGSQSPERKLGNGVLLFCKDFEEKQ 61
           S+   S+S SSP   +EEK C +VSFKDTELRLGLPG QS ERK G G+ LF  DFE+KQ
Sbjct: 26  SSSSSSASSSSPPGTNEEKNCATVSFKDTELRLGLPGFQSSERKSGTGISLFSNDFEDKQ 85

Query: 62  SNGLSSSSSSCGLKNFVSGFKRGFSDAIDG-SVKWGFCNESEVKLG------------SD 121
           SNG  SS     LKN VSG KRGFSDAIDG SVKWGF   + +  G            S 
Sbjct: 86  SNGFCSSRI---LKNLVSGSKRGFSDAIDGSSVKWGFSGSNGLSEGTMLFSPKSGMPPST 145

Query: 122 VN-----GGLKTVKEVVPVNNQCSKIVLEKKPDQVSENGGAPLAKAQVVGWPPIRSFRKN 181
           VN     G LK VKEVVPV NQ SK   E+KP QVSENGGAPLAKAQVVGWPPIRSFRK+
Sbjct: 146 VNAPQACGSLKAVKEVVPV-NQSSKPAQEEKP-QVSENGGAPLAKAQVVGWPPIRSFRKS 205

Query: 182 TMTSTNSTKNADEAEGKSGSTSCLYVKVSMEGAPYLRKVDLKLYKNYSELSLALEKMFSC 241
           TMTSTNSTK ADEAEGKS  T CLYVKVSMEGAPYLRKVDLKL  NYSELSLALEKMFSC
Sbjct: 206 TMTSTNSTKKADEAEGKSELTGCLYVKVSMEGAPYLRKVDLKLCSNYSELSLALEKMFSC 265

Query: 242 FTIGKCGTEGLPTKESLSESNLKDFLHGSEYVLTYEDKDGDWMLVGDVPWEMFTDACKRL 293
           FTIG+CGTEGLPTKE LSESNL DFLHGSEYVLTYEDKDGDWMLVGDVPWEMFTD+C+RL
Sbjct: 266 FTIGQCGTEGLPTKERLSESNLTDFLHGSEYVLTYEDKDGDWMLVGDVPWEMFTDSCRRL 325

[Close]

BLAST of Sed0021487 vs. ExPASy TrEMBL
Match: A0A5A7UYN9 (Auxin-responsive protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold242G00400 PE=3 SV=1)

HSP 1 Score: 417.9 bits (1073), Expect = 3.6e-113
Identity = 231/314 (73.57%), Postives = 245/314 (78.03%), Query Frame = 0


Query: 7   SSSCSSPVHEEKKCGSVSFKDTELRLGLPGSQSPERKLGNGVLLFCKDFEEKQSNGLSSS 66
           + SCS   +EEKKC +VSFKDTELRLGLPGSQSPERK G+ +  F  DFE+KQSNG  SS
Sbjct: 35  TDSCSHVTNEEKKCATVSFKDTELRLGLPGSQSPERKSGSEISFFGNDFEDKQSNGF-SS 94

Query: 67  SSSCGLKNFVSGFKRGFSDAIDG-SVKWGF--CNESEVK-------------------LG 126
           S    LKN VSG KRGFSDAIDG S KW F   N SEVK                   LG
Sbjct: 95  SCPLNLKNLVSGSKRGFSDAIDGSSAKWVFSGSNGSEVKLGEGAVLFSPKSGKPTIGGLG 154

Query: 127 SDVNG-----GLKTVKEVVPVNNQCSKIVLEKKPDQVSENGGAPLAKAQVVGWPPIRSFR 186
           S+VN       LK VKEV+PV  Q S  V EKKP QVSENGGAPLAKAQVVGWPPIRSFR
Sbjct: 155 SNVNTPQSCVTLKAVKEVLPV-PQSSNSVQEKKP-QVSENGGAPLAKAQVVGWPPIRSFR 214

Query: 187 KNTMTSTNSTKNADEAEGKSGSTSCLYVKVSMEGAPYLRKVDLKLYKNYSELSLALEKMF 246
           KNTMT+TNSTKN DE EGKSG + CLYVKVSMEGAPYLRKVDLKLY NYSELSLALEKMF
Sbjct: 215 KNTMTTTNSTKNTDEGEGKSGPSGCLYVKVSMEGAPYLRKVDLKLYSNYSELSLALEKMF 274

Query: 247 SCFTIGKCGTEGLPTKESLSESNLKDFLHGSEYVLTYEDKDGDWMLVGDVPWEMFTDACK 294
           SCFTIG+CGTEG PTKE LSESN KDFLHGSEYVLT EDKDGDWMLVGDVPWEMFT++C+
Sbjct: 275 SCFTIGQCGTEGHPTKERLSESNSKDFLHGSEYVLTCEDKDGDWMLVGDVPWEMFTESCR 334

[Close]

BLAST of Sed0021487 vs. TAIR 10
Match: AT2G22670.2 (indoleacetic acid-induced protein 8 )

HSP 1 Score: 266.2 bits (679), Expect = 3.4e-71
Identity = 157/308 (50.97%), Postives = 198/308 (64.29%), Query Frame = 0


Query: 3   NFVDSSSC----SSPVHEEKKCGSVSFKDTELRLGLPGSQSPERKLGNGVLLFCKDFEEK 62
           N++  S C    SS +       +++FK TELRLGLP SQSPER+   G LL  +  +EK
Sbjct: 23  NYLGLSDCSSVDSSTIPNVVGKSNLNFKATELRLGLPESQSPERETDFG-LLSPRTPDEK 82

Query: 63  QSNGL----SSSSSSCGLKNFVSGFKRGFSDAIDGSVKWGFCNESEVKLGSDVNGGLKTV 122
               L     + S++ G KN VSG KRGF+D  D          S VK      GG+  +
Sbjct: 83  LLFPLLPSKDNGSATTGHKNVVSGNKRGFADTWD--------EFSGVKGSVRPGGGINMM 142

Query: 123 KEVVPVNNQCSKIVLEKKPDQVSENGGAPLAKAQVVGWPPIRSFRKNTMTSTNSTKNADE 182
             + P     SK + E++         AP AKAQVVGWPPIRS+RKNTM S+ S KN DE
Sbjct: 143 --LSPKVKDVSKSIQEERSHAKGGLNNAPAAKAQVVGWPPIRSYRKNTMASSTS-KNTDE 202

Query: 183 AEGKSGSTSCLYVKVSMEGAPYLRKVDLKLYKNYSELSLALEKMFSCFTIGKCGTEGLPT 242
            +GK G    L+VKVSM+GAPYLRKVDL+ Y +Y +LS ALEKMFSCFT+G+CG  G   
Sbjct: 203 VDGKPG-LGVLFVKVSMDGAPYLRKVDLRTYTSYQQLSSALEKMFSCFTLGQCGLHGAQG 262

Query: 243 KESLSESNLKDFLHGSEYVLTYEDKDGDWMLVGDVPWEMFTDACKRLRIMKGSEAIGLGR 302
           +E +SE  LKD LHGSE+VLTYEDKDGDWMLVGDVPWE+FT+ C++L+IMKGS++IGLG 
Sbjct: 263 RERMSEIKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEIFTETCQKLKIMKGSDSIGLGA 317

[Close]

BLAST of Sed0021487 vs. TAIR 10
Match: AT2G22670.1 (indoleacetic acid-induced protein 8 )

HSP 1 Score: 263.5 bits (672), Expect = 2.2e-70
Identity = 155/298 (52.01%), Postives = 194/298 (65.10%), Query Frame = 0


Query: 3   NFVDSSSC----SSPVHEEKKCGSVSFKDTELRLGLPGSQSPERKLGNGVLLFCKDFEEK 62
           N++  S C    SS +       +++FK TELRLGLP SQSPER+   G LL  +  +EK
Sbjct: 23  NYLGLSDCSSVDSSTIPNVVGKSNLNFKATELRLGLPESQSPERETDFG-LLSPRTPDEK 82

Query: 63  QSNGL----SSSSSSCGLKNFVSGFKRGFSDAIDGSVKWGFCNESEVKLGSDVNGGLKTV 122
               L     + S++ G KN VSG KRGF+D  D          S VK      GG+  +
Sbjct: 83  LLFPLLPSKDNGSATTGHKNVVSGNKRGFADTWD--------EFSGVKGSVRPGGGINMM 142

Query: 123 KEVVPVNNQCSKIVLEKKPDQVSENGGAPLAKAQVVGWPPIRSFRKNTMTSTNSTKNADE 182
             + P     SK + E++         AP AKAQVVGWPPIRS+RKNTM S+ S KN DE
Sbjct: 143 --LSPKVKDVSKSIQEERSHAKGGLNNAPAAKAQVVGWPPIRSYRKNTMASSTS-KNTDE 202

Query: 183 AEGKSGSTSCLYVKVSMEGAPYLRKVDLKLYKNYSELSLALEKMFSCFTIGKCGTEGLPT 242
            +GK G    L+VKVSM+GAPYLRKVDL+ Y +Y +LS ALEKMFSCFT+G+CG  G   
Sbjct: 203 VDGKPG-LGVLFVKVSMDGAPYLRKVDLRTYTSYQQLSSALEKMFSCFTLGQCGLHGAQG 262

Query: 243 KESLSESNLKDFLHGSEYVLTYEDKDGDWMLVGDVPWEMFTDACKRLRIMKGSEAIGL 293
           +E +SE  LKD LHGSE+VLTYEDKDGDWMLVGDVPWE+FT+ C++L+IMKGS++IGL
Sbjct: 263 RERMSEIKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEIFTETCQKLKIMKGSDSIGL 307

[Close]

BLAST of Sed0021487 vs. TAIR 10
Match: AT2G22670.3 (indoleacetic acid-induced protein 8 )

HSP 1 Score: 263.5 bits (672), Expect = 2.2e-70
Identity = 155/298 (52.01%), Postives = 194/298 (65.10%), Query Frame = 0


Query: 3   NFVDSSSC----SSPVHEEKKCGSVSFKDTELRLGLPGSQSPERKLGNGVLLFCKDFEEK 62
           N++  S C    SS +       +++FK TELRLGLP SQSPER+   G LL  +  +EK
Sbjct: 23  NYLGLSDCSSVDSSTIPNVVGKSNLNFKATELRLGLPESQSPERETDFG-LLSPRTPDEK 82

Query: 63  QSNGL----SSSSSSCGLKNFVSGFKRGFSDAIDGSVKWGFCNESEVKLGSDVNGGLKTV 122
               L     + S++ G KN VSG KRGF+D  D          S VK      GG+  +
Sbjct: 83  LLFPLLPSKDNGSATTGHKNVVSGNKRGFADTWD--------EFSGVKGSVRPGGGINMM 142

Query: 123 KEVVPVNNQCSKIVLEKKPDQVSENGGAPLAKAQVVGWPPIRSFRKNTMTSTNSTKNADE 182
             + P     SK + E++         AP AKAQVVGWPPIRS+RKNTM S+ S KN DE
Sbjct: 143 --LSPKVKDVSKSIQEERSHAKGGLNNAPAAKAQVVGWPPIRSYRKNTMASSTS-KNTDE 202

Query: 183 AEGKSGSTSCLYVKVSMEGAPYLRKVDLKLYKNYSELSLALEKMFSCFTIGKCGTEGLPT 242
            +GK G    L+VKVSM+GAPYLRKVDL+ Y +Y +LS ALEKMFSCFT+G+CG  G   
Sbjct: 203 VDGKPG-LGVLFVKVSMDGAPYLRKVDLRTYTSYQQLSSALEKMFSCFTLGQCGLHGAQG 262

Query: 243 KESLSESNLKDFLHGSEYVLTYEDKDGDWMLVGDVPWEMFTDACKRLRIMKGSEAIGL 293
           +E +SE  LKD LHGSE+VLTYEDKDGDWMLVGDVPWE+FT+ C++L+IMKGS++IGL
Sbjct: 263 RERMSEIKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEIFTETCQKLKIMKGSDSIGL 307

[Close]

BLAST of Sed0021487 vs. TAIR 10
Match: AT2G22670.4 (indoleacetic acid-induced protein 8 )

HSP 1 Score: 263.5 bits (672), Expect = 2.2e-70
Identity = 155/298 (52.01%), Postives = 194/298 (65.10%), Query Frame = 0


Query: 3   NFVDSSSC----SSPVHEEKKCGSVSFKDTELRLGLPGSQSPERKLGNGVLLFCKDFEEK 62
           N++  S C    SS +       +++FK TELRLGLP SQSPER+   G LL  +  +EK
Sbjct: 40  NYLGLSDCSSVDSSTIPNVVGKSNLNFKATELRLGLPESQSPERETDFG-LLSPRTPDEK 99

Query: 63  QSNGL----SSSSSSCGLKNFVSGFKRGFSDAIDGSVKWGFCNESEVKLGSDVNGGLKTV 122
               L     + S++ G KN VSG KRGF+D  D          S VK      GG+  +
Sbjct: 100 LLFPLLPSKDNGSATTGHKNVVSGNKRGFADTWD--------EFSGVKGSVRPGGGINMM 159

Query: 123 KEVVPVNNQCSKIVLEKKPDQVSENGGAPLAKAQVVGWPPIRSFRKNTMTSTNSTKNADE 182
             + P     SK + E++         AP AKAQVVGWPPIRS+RKNTM S+ S KN DE
Sbjct: 160 --LSPKVKDVSKSIQEERSHAKGGLNNAPAAKAQVVGWPPIRSYRKNTMASSTS-KNTDE 219

Query: 183 AEGKSGSTSCLYVKVSMEGAPYLRKVDLKLYKNYSELSLALEKMFSCFTIGKCGTEGLPT 242
            +GK G    L+VKVSM+GAPYLRKVDL+ Y +Y +LS ALEKMFSCFT+G+CG  G   
Sbjct: 220 VDGKPG-LGVLFVKVSMDGAPYLRKVDLRTYTSYQQLSSALEKMFSCFTLGQCGLHGAQG 279

Query: 243 KESLSESNLKDFLHGSEYVLTYEDKDGDWMLVGDVPWEMFTDACKRLRIMKGSEAIGL 293
           +E +SE  LKD LHGSE+VLTYEDKDGDWMLVGDVPWE+FT+ C++L+IMKGS++IGL
Sbjct: 280 RERMSEIKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEIFTETCQKLKIMKGSDSIGL 324

[Close]

BLAST of Sed0021487 vs. TAIR 10
Match: AT4G29080.1 (phytochrome-associated protein 2 )

HSP 1 Score: 255.0 bits (650), Expect = 7.8e-68
Identity = 153/294 (52.04%), Postives = 181/294 (61.56%), Query Frame = 0


Query: 5   VDSSSCSSPVHEEKKCGSVSFKDTELRLGLPGSQSPERKLGNGVLLFCKDFEEKQSNGLS 64
           +++++ S           ++FK TELRLGLPGS+SPER                 S  L+
Sbjct: 20  MEATTMSDKTKTRDNNNGLNFKATELRLGLPGSESPER---------------VDSRFLA 79

Query: 65  SSSSSCGLKNFVSGFKRGFSDAIDGSVKWGFCNESEVKLGSDVNGGLKTVKEVVPVNNQC 124
            + SSC     VSG KR FSDAI+ S KW F   S    G DV  G      VV      
Sbjct: 80  LNKSSCP----VSGAKRVFSDAINDSNKWVFSPGSTTATG-DVGSGSGPRTSVVKDGKST 139

Query: 125 SKIVLEKKPDQVSENGGAPLAKAQVVGWPPIRSFRKNTMTSTNSTK-----NADEAEGKS 184
           +         +   +  AP +KAQVVGWPPIRSFRKN+M S+ S K       +EAE KS
Sbjct: 140 TFTKPAVPVKEKKSSATAPASKAQVVGWPPIRSFRKNSMASSQSQKPGNNSETEEAEAKS 199

Query: 185 G-STSCLYVKVSMEGAPYLRKVDLKLYKNYSELSLALEKMFSCFTIGKCGTEGLPTKESL 244
           G    CLYVKVSMEGAPYLRK+DLK YK+Y ELS ALEKMFSCFTIG+ G+ G   ++ L
Sbjct: 200 GPEQPCLYVKVSMEGAPYLRKIDLKTYKSYLELSSALEKMFSCFTIGQFGSHGGCGRDGL 259

Query: 245 SESNLKDFLHGSEYVLTYEDKDGDWMLVGDVPWEMFTDACKRLRIMKGSEAIGL 293
           +ES L D L GSEYV+TYEDKD DWMLVGDVPWEMF  +CK+LRIMK SEAIGL
Sbjct: 260 NESRLTDLLRGSEYVVTYEDKDSDWMLVGDVPWEMFICSCKKLRIMKSSEAIGL 293

The following BLAST results are available for this feature:

BLAST of Sed0021487 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022151565.1	2.5e-116	76.68	auxin-responsive protein IAA27-like [Momordica charantia]	[more]
XP_038899516.1	1.4e-114	75.08	auxin-responsive protein IAA21-like [Benincasa hispida]	[more]
XP_023548069.1	8.8e-114	74.68	auxin-responsive protein IAA27-like [Cucurbita pepo subsp. pepo]	[more]
XP_022954003.1	1.2e-113	74.60	auxin-responsive protein IAA27-like [Cucurbita moschata] >KAG6575526.1 Auxin-res...	[more]
XP_004141756.1	2.6e-113	74.12	auxin-responsive protein IAA21 [Cucumis sativus] >KGN45391.1 hypothetical protei...	[more]

BLAST of Sed0021487 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q38826	3.1e-69	52.01	Auxin-responsive protein IAA8 OS=Arabidopsis thaliana OX=3702 GN=IAA8 PE=1 SV=1	[more]
Q9ZSY8	1.1e-66	52.04	Auxin-responsive protein IAA27 OS=Arabidopsis thaliana OX=3702 GN=IAA27 PE=1 SV=...	[more]
Q38827	1.6e-65	49.17	Auxin-responsive protein IAA9 OS=Arabidopsis thaliana OX=3702 GN=IAA9 PE=1 SV=1	[more]
Q5Z749	2.3e-56	48.69	Auxin-responsive protein IAA21 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA21...	[more]
O24407	4.8e-54	46.81	Auxin-responsive protein IAA16 OS=Arabidopsis thaliana OX=3702 GN=IAA16 PE=1 SV=...	[more]

BLAST of Sed0021487 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DBJ4	1.2e-116	76.68	Auxin-responsive protein OS=Momordica charantia OX=3673 GN=LOC111019475 PE=3 SV=...	[more]
A0A6J1GPX2	5.6e-114	74.60	Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111456393 PE=3 SV=1	[more]
A0A0A0KC72	1.2e-113	74.12	Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_7G447060 PE=3 SV=1	[more]
A0A6J1JVE5	1.6e-113	74.60	Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111488670 PE=3 SV=1	[more]
A0A5A7UYN9	3.6e-113	73.57	Auxin-responsive protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]

BLAST of Sed0021487 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G22670.2	3.4e-71	50.97	indoleacetic acid-induced protein 8	[more]
AT2G22670.1	2.2e-70	52.01	indoleacetic acid-induced protein 8	[more]
AT2G22670.3	2.2e-70	52.01	indoleacetic acid-induced protein 8	[more]
AT2G22670.4	2.2e-70	52.01	indoleacetic acid-induced protein 8	[more]
AT4G29080.1	7.8e-68	52.04	phytochrome-associated protein 2	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.20.90		coord: 179..295 e-value: 2.0E-43 score: 148.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 160..179
None	No IPR available	PANTHER	PTHR31734:SF157	AUXIN-RESPONSIVE PROTEIN	coord: 8..293
None	No IPR available	SUPERFAMILY	54277	CAD & PB1 domains	coord: 180..285
IPR033389	AUX/IAA domain	PFAM	PF02309	AUX_IAA	coord: 28..293 e-value: 6.0E-88 score: 294.8
IPR003311	AUX/IAA protein	PANTHER	PTHR31734	AUXIN-RESPONSIVE PROTEIN IAA17	coord: 8..293
IPR000270	PB1 domain	PROSITE	PS51745	PB1	coord: 184..286 score: 24.482523

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0021487.1	Sed0021487.1	mRNA
Sed0021487.2	Sed0021487.2	mRNA
Sed0021487.3	Sed0021487.3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding