Sed0021443 (gene) Chayote v1

Overview


Name	Sed0021443
Type	gene
Organism	Sechium edule (Chayote v1)
Description	GDP-L-fucose synthase
Location	LG11: 4538338 .. 4539931 (-)
RNA-Seq Expression	Sed0021443
Synteny	Sed0021443

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCAATTAAAACCACATTTGAATCTGCGACCGTATCCTGTATTATACGCCCTCACATTTTCTTCCTCCTCTCGCCGATCTCCGGCGACCGACGGTTCTCTCTCCAACCTCCGACGATGGGCGGCGCCGCCGACAACGGTACTCTCTCTCTCTAATCTATGGCGGTTCTTGTTTTCTAGATCAGATCTACTGTAATTCCTTATGAAATCTCTCTTTTCTTTTCGCATTTCCAGCTTCATCGGGATCTACTTTCCTCTCCGACAAATCGGCTAAGATCTTCGTCGCCGGTTACCGTGGCCTAGTCGGTTCCGCCATTGTTCGCAAGCTTCAGAACCTTGGATTCACGAATCTCCTTCTTCGTTCCCACTCCGATCTTGACCTAACTCGCCAATCCGATGTCGAATCGTTCTTCGCTACTGAGAAACCTCGATTCGTCATCCTCGCCGCCGCCAAAGTCGGCGGAATCCACGCTAACAACACCTATCCGGCGGACTTCATCGCCATTAACCTTCAAATCCAGACGAACGTCATCGATTCCGCCTATCGCAATGGCGTCCAGAAGCTATTGTTCCTCGGTTCTTCATGTATTTATCCGAAATTCGCTCCACAGCCGATTCCGGAAGATGCATTGCTGACCGGTCCATTGGAGCCGACAAACGAGTGGTACGCGGTGGCGAAGATCGCCGGGATCAAAATGTGCCAAGCGTATCGGATCCAATACAATTGGGATGCGATTTCGGGAATGCCGACGAATCTATATGGTCCGAACGACAATTTCCATCCGGAGAATTCACACGTCTTGCCGGCATTGATGAGGAGGTTTCACGAGGCGAAGGTTAATGCGGCGAAAGAAGTGGTGGTTTGGGGAAGTGGAAGCCCTCTCAGGGAGTTTCTTCACGTCGACGATTTGGCCGACGCGGTAGTGTTCTTGATGGAGGAATACAGTGGTTTGGGGCATGTGAATGTTGGAAGTGGGAAGGAAGTTAGCATCAAGGAGCTGGCTGAATTGGTGAAGGAAGTTGTGGGATTTGAAGGAGATCTTGTTTGGGATAAATCAAAGCCTGATGGAACTCCAAGGAAATTGATGGATAGTTCCAAGCTTGCTGGATTGGGATGGAATCCTAAGATTTCTCTCAAGGATGGACTTGTGGATACTTACAAATGGTATGTTCAAAATGTGCAGCAATGAGCAAAATTCAGGTCAGTTCTTCATTTCAGTGATCTGTTTTGTTATTTTTTGTTGTGATTGTAGTTTATATATTTGTATTACTGAATGAATTTTGCATGATCTGAAGTTTATGTTGCTTACTGATGTATGATTTGATGATGACTATGGAGATTGATGCTTACTTAGTTGATCTTACTATATTAGATGATGAGCTAGTTTGTAATTTATACAATCGAGATTAAATATGCAGATTTGAGAACTTTTTCTTTCTTACATTTTGGTTTGTAAGGATTGGGGAATTTGATGATTGTATGGATAGATTTGAAATGCTTTGTGGGTTGAAAATCTGTTGTGAGTAAACCATCATGAAGTGGCTAAGTGGTCAAAGAGGGCTTTGGGGGTGCTTAAGGTGATGGGTTCGATCCAT

mRNA sequence

TCCAATTAAAACCACATTTGAATCTGCGACCGTATCCTGTATTATACGCCCTCACATTTTCTTCCTCCTCTCGCCGATCTCCGGCGACCGACGGTTCTCTCTCCAACCTCCGACGATGGGCGGCGCCGCCGACAACGCTTCATCGGGATCTACTTTCCTCTCCGACAAATCGGCTAAGATCTTCGTCGCCGGTTACCGTGGCCTAGTCGGTTCCGCCATTGTTCGCAAGCTTCAGAACCTTGGATTCACGAATCTCCTTCTTCGTTCCCACTCCGATCTTGACCTAACTCGCCAATCCGATGTCGAATCGTTCTTCGCTACTGAGAAACCTCGATTCGTCATCCTCGCCGCCGCCAAAGTCGGCGGAATCCACGCTAACAACACCTATCCGGCGGACTTCATCGCCATTAACCTTCAAATCCAGACGAACGTCATCGATTCCGCCTATCGCAATGGCGTCCAGAAGCTATTGTTCCTCGGTTCTTCATGTATTTATCCGAAATTCGCTCCACAGCCGATTCCGGAAGATGCATTGCTGACCGGTCCATTGGAGCCGACAAACGAGTGGTACGCGGTGGCGAAGATCGCCGGGATCAAAATGTGCCAAGCGTATCGGATCCAATACAATTGGGATGCGATTTCGGGAATGCCGACGAATCTATATGGTCCGAACGACAATTTCCATCCGGAGAATTCACACGTCTTGCCGGCATTGATGAGGAGGTTTCACGAGGCGAAGGTTAATGCGGCGAAAGAAGTGGTGGTTTGGGGAAGTGGAAGCCCTCTCAGGGAGTTTCTTCACGTCGACGATTTGGCCGACGCGGTAGTGTTCTTGATGGAGGAATACAGTGGTTTGGGGCATGTGAATGTTGGAAGTGGGAAGGAAGTTAGCATCAAGGAGCTGGCTGAATTGGTGAAGGAAGTTGTGGGATTTGAAGGAGATCTTGTTTGGGATAAATCAAAGCCTGATGGAACTCCAAGGAAATTGATGGATAGTTCCAAGCTTGCTGGATTGGGATGGAATCCTAAGATTTCTCTCAAGGATGGACTTGTGGATACTTACAAATGGTATGTTCAAAATGTGCAGCAATGAGCAAAATTCAGGTCAGTTCTTCATTTCAGTGATCTGTTTTGTTATTTTTTGTTGTGATTGTAGTTTATATATTTGTATTACTGAATGAATTTTGCATGATCTGAAGTTTATGTTGCTTACTGATGTATGATTTGATGATGACTATGGAGATTGATGCTTACTTAGTTGATCTTACTATATTAGATGATGAGCTAGTTTGTAATTTATACAATCGAGATTAAATATGCAGATTTGAGAACTTTTTCTTTCTTACATTTTGGTTTGTAAGGATTGGGGAATTTGATGATTGTATGGATAGATTTGAAATGCTTTGTGGGTTGAAAATCTGTTGTGAGTAAACCATCATGAAGTGGCTAAGTGGTCAAAGAGGGCTTTGGGGGTGCTTAAGGTGATGGGTTCGATCCAT

Coding sequence (CDS)

ATGGGCGGCGCCGCCGACAACGCTTCATCGGGATCTACTTTCCTCTCCGACAAATCGGCTAAGATCTTCGTCGCCGGTTACCGTGGCCTAGTCGGTTCCGCCATTGTTCGCAAGCTTCAGAACCTTGGATTCACGAATCTCCTTCTTCGTTCCCACTCCGATCTTGACCTAACTCGCCAATCCGATGTCGAATCGTTCTTCGCTACTGAGAAACCTCGATTCGTCATCCTCGCCGCCGCCAAAGTCGGCGGAATCCACGCTAACAACACCTATCCGGCGGACTTCATCGCCATTAACCTTCAAATCCAGACGAACGTCATCGATTCCGCCTATCGCAATGGCGTCCAGAAGCTATTGTTCCTCGGTTCTTCATGTATTTATCCGAAATTCGCTCCACAGCCGATTCCGGAAGATGCATTGCTGACCGGTCCATTGGAGCCGACAAACGAGTGGTACGCGGTGGCGAAGATCGCCGGGATCAAAATGTGCCAAGCGTATCGGATCCAATACAATTGGGATGCGATTTCGGGAATGCCGACGAATCTATATGGTCCGAACGACAATTTCCATCCGGAGAATTCACACGTCTTGCCGGCATTGATGAGGAGGTTTCACGAGGCGAAGGTTAATGCGGCGAAAGAAGTGGTGGTTTGGGGAAGTGGAAGCCCTCTCAGGGAGTTTCTTCACGTCGACGATTTGGCCGACGCGGTAGTGTTCTTGATGGAGGAATACAGTGGTTTGGGGCATGTGAATGTTGGAAGTGGGAAGGAAGTTAGCATCAAGGAGCTGGCTGAATTGGTGAAGGAAGTTGTGGGATTTGAAGGAGATCTTGTTTGGGATAAATCAAAGCCTGATGGAACTCCAAGGAAATTGATGGATAGTTCCAAGCTTGCTGGATTGGGATGGAATCCTAAGATTTCTCTCAAGGATGGACTTGTGGATACTTACAAATGGTATGTTCAAAATGTGCAGCAATGA

Protein sequence

MGGAADNASSGSTFLSDKSAKIFVAGYRGLVGSAIVRKLQNLGFTNLLLRSHSDLDLTRQSDVESFFATEKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRNGVQKLLFLGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQYNWDAISGMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNAAKEVVVWGSGSPLREFLHVDDLADAVVFLMEEYSGLGHVNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAGLGWNPKISLKDGLVDTYKWYVQNVQQ

Homology

[Close]

BLAST of Sed0021443 vs. NCBI nr
Match: XP_023521193.1 (putative GDP-L-fucose synthase 2 [Cucurbita pepo subsp. pepo] >KAG7030077.1 putative GDP-L-fucose synthase 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 637.5 bits (1643), Expect = 6.3e-179
Identity = 313/325 (96.31%), Postives = 319/325 (98.15%), Query Frame = 0


Query: 1   MGGAADNASSGSTFLSDKSAKIFVAGYRGLVGSAIVRKLQNLGFTNLLLRSHSDLDLTRQ 60
           MGGAADNASSGS+FLSDKSAKIFVAG+RGLVGSAIVRKLQ LGFTNLLLRSHS+LDLTRQ
Sbjct: 1   MGGAADNASSGSSFLSDKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQ 60

Query: 61  SDVESFFATEKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRNGVQKLLF 120
           SDVESFFA EKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYR+GVQKLLF
Sbjct: 61  SDVESFFANEKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRHGVQKLLF 120

Query: 121 LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQYNWDAISGMPT 180
           LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQ+NW+AISGMPT
Sbjct: 121 LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQHNWNAISGMPT 180

Query: 181 NLYGPNDNFHPENSHVLPALMRRFHEAKVNAAKEVVVWGSGSPLREFLHVDDLADAVVFL 240
           NLYGPNDNFHPENSHVLPALMRRFHEAKVN AKEVVVWGSGSPLREFLHVDDLADAV FL
Sbjct: 181 NLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGSGSPLREFLHVDDLADAVAFL 240

Query: 241 MEEYSGLGHVNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAGL 300
           MEEYS LGHVNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLA L
Sbjct: 241 MEEYSDLGHVNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAEL 300

Query: 301 GWNPKISLKDGLVDTYKWYVQNVQQ 326
           GWNPKISLKDGLVDTYKWYVQNVQQ
Sbjct: 301 GWNPKISLKDGLVDTYKWYVQNVQQ 325

[Close]

BLAST of Sed0021443 vs. NCBI nr
Match: XP_022946263.1 (putative GDP-L-fucose synthase 2 [Cucurbita moschata])

HSP 1 Score: 636.0 bits (1639), Expect = 1.8e-178
Identity = 312/325 (96.00%), Postives = 318/325 (97.85%), Query Frame = 0


Query: 1   MGGAADNASSGSTFLSDKSAKIFVAGYRGLVGSAIVRKLQNLGFTNLLLRSHSDLDLTRQ 60
           MGGAADN SSGS+FLSDKSAKIFVAG+RGLVGSAIVRKLQ LGFTNLLLRSHS+LDLTRQ
Sbjct: 1   MGGAADNVSSGSSFLSDKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQ 60

Query: 61  SDVESFFATEKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRNGVQKLLF 120
           SDVESFFA EKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYR+GVQKLLF
Sbjct: 61  SDVESFFANEKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRHGVQKLLF 120

Query: 121 LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQYNWDAISGMPT 180
           LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQ+NW+AISGMPT
Sbjct: 121 LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQHNWNAISGMPT 180

Query: 181 NLYGPNDNFHPENSHVLPALMRRFHEAKVNAAKEVVVWGSGSPLREFLHVDDLADAVVFL 240
           NLYGPNDNFHPENSHVLPALMRRFHEAKVN AKEVVVWGSGSPLREFLHVDDLADAV FL
Sbjct: 181 NLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGSGSPLREFLHVDDLADAVAFL 240

Query: 241 MEEYSGLGHVNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAGL 300
           MEEYS LGHVNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLA L
Sbjct: 241 MEEYSDLGHVNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAEL 300

Query: 301 GWNPKISLKDGLVDTYKWYVQNVQQ 326
           GWNPKISLKDGLVDTYKWYVQNVQQ
Sbjct: 301 GWNPKISLKDGLVDTYKWYVQNVQQ 325

[Close]

BLAST of Sed0021443 vs. NCBI nr
Match: XP_022999738.1 (putative GDP-L-fucose synthase 2 [Cucurbita maxima])

HSP 1 Score: 633.3 bits (1632), Expect = 1.2e-177
Identity = 309/325 (95.08%), Postives = 318/325 (97.85%), Query Frame = 0


Query: 1   MGGAADNASSGSTFLSDKSAKIFVAGYRGLVGSAIVRKLQNLGFTNLLLRSHSDLDLTRQ 60
           MGGAADNASSGS+FLSDKSAKIF+AG+RGLVGSAIVRKLQ LGFTNLLLRSHS+LDLTRQ
Sbjct: 1   MGGAADNASSGSSFLSDKSAKIFIAGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQ 60

Query: 61  SDVESFFATEKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRNGVQKLLF 120
           SDVESFFA EKPRF ILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYR+GVQKLLF
Sbjct: 61  SDVESFFANEKPRFAILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRHGVQKLLF 120

Query: 121 LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQYNWDAISGMPT 180
           LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQ+NW+AISGMPT
Sbjct: 121 LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQHNWNAISGMPT 180

Query: 181 NLYGPNDNFHPENSHVLPALMRRFHEAKVNAAKEVVVWGSGSPLREFLHVDDLADAVVFL 240
           NLYGPNDNFHPENSHVLPALMRRFHEAKVN AKEVVVWGSGSPLREFLHVDDLADAV FL
Sbjct: 181 NLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGSGSPLREFLHVDDLADAVAFL 240

Query: 241 MEEYSGLGHVNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAGL 300
           MEEYS LGHVNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLA L
Sbjct: 241 MEEYSDLGHVNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAEL 300

Query: 301 GWNPKISLKDGLVDTYKWYVQNVQQ 326
           GWNP+ISL+DGLVDTYKWYVQNVQQ
Sbjct: 301 GWNPRISLRDGLVDTYKWYVQNVQQ 325

[Close]

BLAST of Sed0021443 vs. NCBI nr
Match: XP_008452484.1 (PREDICTED: putative GDP-L-fucose synthase 2 [Cucumis melo] >XP_016902552.1 PREDICTED: putative GDP-L-fucose synthase 2 [Cucumis melo])

HSP 1 Score: 632.5 bits (1630), Expect = 2.0e-177
Identity = 311/325 (95.69%), Postives = 316/325 (97.23%), Query Frame = 0


Query: 1   MGGAADNASSGSTFLSDKSAKIFVAGYRGLVGSAIVRKLQNLGFTNLLLRSHSDLDLTRQ 60
           MGGAADNASSGS+FL DKSAKIFVAG+RGLVGSAIVRKLQ LGFTNLLLRSHS+LDLTRQ
Sbjct: 1   MGGAADNASSGSSFLFDKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQ 60

Query: 61  SDVESFFATEKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRNGVQKLLF 120
           SDVESFFA EKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYR GV+KLLF
Sbjct: 61  SDVESFFANEKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRYGVEKLLF 120

Query: 121 LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQYNWDAISGMPT 180
           LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQY WDAISGMPT
Sbjct: 121 LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQYKWDAISGMPT 180

Query: 181 NLYGPNDNFHPENSHVLPALMRRFHEAKVNAAKEVVVWGSGSPLREFLHVDDLADAVVFL 240
           NLYGPNDNFHPENSHVLPALMRRFHEAKV  AKEVVVWGSGSPLREFLHVDDLADAVVFL
Sbjct: 181 NLYGPNDNFHPENSHVLPALMRRFHEAKVKGAKEVVVWGSGSPLREFLHVDDLADAVVFL 240

Query: 241 MEEYSGLGHVNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAGL 300
           MEEYS LGH+NVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLA L
Sbjct: 241 MEEYSDLGHLNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAEL 300

Query: 301 GWNPKISLKDGLVDTYKWYVQNVQQ 326
           GWNPKISLKDGLVDTYKWYVQNVQQ
Sbjct: 301 GWNPKISLKDGLVDTYKWYVQNVQQ 325

[Close]

BLAST of Sed0021443 vs. NCBI nr
Match: XP_004144717.1 (putative GDP-L-fucose synthase 2 [Cucumis sativus] >KGN61068.1 hypothetical protein Csa_021261 [Cucumis sativus])

HSP 1 Score: 631.7 bits (1628), Expect = 3.5e-177
Identity = 310/325 (95.38%), Postives = 316/325 (97.23%), Query Frame = 0


Query: 1   MGGAADNASSGSTFLSDKSAKIFVAGYRGLVGSAIVRKLQNLGFTNLLLRSHSDLDLTRQ 60
           MGGAADNASSGS+FL DKSAKIFVAG+RGLVGSAIVRKLQ LGFTNL+LRSHS+LDLTRQ
Sbjct: 1   MGGAADNASSGSSFLFDKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLILRSHSELDLTRQ 60

Query: 61  SDVESFFATEKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRNGVQKLLF 120
           SDVESFFA EKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYR GV+KLLF
Sbjct: 61  SDVESFFANEKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRYGVEKLLF 120

Query: 121 LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQYNWDAISGMPT 180
           LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQY WDAISGMPT
Sbjct: 121 LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQYKWDAISGMPT 180

Query: 181 NLYGPNDNFHPENSHVLPALMRRFHEAKVNAAKEVVVWGSGSPLREFLHVDDLADAVVFL 240
           NLYGPNDNFHPENSHVLPALMRRFHEAKV  AKEVVVWGSGSPLREFLHVDDLADAVVFL
Sbjct: 181 NLYGPNDNFHPENSHVLPALMRRFHEAKVKGAKEVVVWGSGSPLREFLHVDDLADAVVFL 240

Query: 241 MEEYSGLGHVNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAGL 300
           MEEYS LGH+NVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLA L
Sbjct: 241 MEEYSDLGHLNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAEL 300

Query: 301 GWNPKISLKDGLVDTYKWYVQNVQQ 326
           GWNPKISLKDGLVDTYKWYVQNVQQ
Sbjct: 301 GWNPKISLKDGLVDTYKWYVQNVQQ 325

[Close]

BLAST of Sed0021443 vs. ExPASy Swiss-Prot
Match: Q9LMU0 (Putative GDP-L-fucose synthase 2 OS=Arabidopsis thaliana OX=3702 GN=GER2 PE=1 SV=1)

HSP 1 Score: 555.4 bits (1430), Expect = 4.1e-157
Identity = 270/324 (83.33%), Postives = 293/324 (90.43%), Query Frame = 0


Query: 5   ADNASS---GSTFLSDKSAKIFVAGYRGLVGSAIVRKLQNLGFTNLLLRSHSDLDLTRQS 64
           ADN  S     +F+ +KSAKIFVAG+RGLVGSAIVRKLQ+ GFTNL+LR+HS+LDLT QS
Sbjct: 2   ADNTGSEMKSGSFMLEKSAKIFVAGHRGLVGSAIVRKLQDQGFTNLVLRTHSELDLTSQS 61

Query: 65  DVESFFATEKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRNGVQKLLFL 124
           DVESFFATEKP +VILAAAKVGGIHANNTYPADFI +NLQIQTNVI SAY +GV+KLLFL
Sbjct: 62  DVESFFATEKPVYVILAAAKVGGIHANNTYPADFIGVNLQIQTNVIHSAYTHGVKKLLFL 121

Query: 125 GSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQYNWDAISGMPTN 184
           GSSCIYPKFAPQPIPE ALLTGPLEPTNEWYA+AKIAGIKMCQAYR+Q+ WDAISGMPTN
Sbjct: 122 GSSCIYPKFAPQPIPESALLTGPLEPTNEWYAIAKIAGIKMCQAYRLQHQWDAISGMPTN 181

Query: 185 LYGPNDNFHPENSHVLPALMRRFHEAKVNAAKEVVVWGSGSPLREFLHVDDLADAVVFLM 244
           LYG NDNFHPENSHVLPALMRRFHEAK N A EVVVWGSGSPLREFLHVDDLADA VFLM
Sbjct: 182 LYGQNDNFHPENSHVLPALMRRFHEAKANNADEVVVWGSGSPLREFLHVDDLADACVFLM 241

Query: 245 EEYSGLGHVNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAGLG 304
           ++YSG  HVNVGSG EV+IKELAELVKEVVGF+G LVWD +KPDGTPRKLMDSSKLA LG
Sbjct: 242 DQYSGFEHVNVGSGVEVTIKELAELVKEVVGFKGKLVWDTTKPDGTPRKLMDSSKLASLG 301

Query: 305 WNPKISLKDGLVDTYKWYVQNVQQ 326
           W PKISLKDGL  TY+WY++NV Q
Sbjct: 302 WTPKISLKDGLSQTYEWYLENVVQ 325

[Close]

BLAST of Sed0021443 vs. ExPASy Swiss-Prot
Match: O49213 (GDP-L-fucose synthase 1 OS=Arabidopsis thaliana OX=3702 GN=GER1 PE=1 SV=3)

HSP 1 Score: 543.1 bits (1398), Expect = 2.1e-153
Identity = 259/319 (81.19%), Postives = 289/319 (90.60%), Query Frame = 0


Query: 5   ADNASSGSTFLSDKSAKIFVAGYRGLVGSAIVRKLQNLGFTNLLLRSHSDLDLTRQSDVE 64
           A+   S  + +SDKSAKIFVAG+RGLVGSAIVRKLQ  GFTNL+L++H++LDLTRQ+DVE
Sbjct: 2   AETIGSEVSSMSDKSAKIFVAGHRGLVGSAIVRKLQEQGFTNLVLKTHAELDLTRQADVE 61

Query: 65  SFFATEKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRNGVQKLLFLGSS 124
           SFF+ EKP +VILAAAKVGGIHANNTYPADFI +NLQIQTNVI SAY +GV+KLLFLGSS
Sbjct: 62  SFFSQEKPVYVILAAAKVGGIHANNTYPADFIGVNLQIQTNVIHSAYEHGVKKLLFLGSS 121

Query: 125 CIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQYNWDAISGMPTNLYG 184
           CIYPKFAPQPIPE ALLT  LEPTNEWYA+AKIAGIK CQAYRIQ+ WDAISGMPTNLYG
Sbjct: 122 CIYPKFAPQPIPESALLTASLEPTNEWYAIAKIAGIKTCQAYRIQHGWDAISGMPTNLYG 181

Query: 185 PNDNFHPENSHVLPALMRRFHEAKVNAAKEVVVWGSGSPLREFLHVDDLADAVVFLMEEY 244
           PNDNFHPENSHVLPALMRRFHEAKVN A+EVVVWG+GSPLREFLHVDDLADA VFL++ Y
Sbjct: 182 PNDNFHPENSHVLPALMRRFHEAKVNGAEEVVVWGTGSPLREFLHVDDLADACVFLLDRY 241

Query: 245 SGLGHVNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAGLGWNP 304
           SGL HVN+GSG+EV+I+ELAELVKEVVGFEG L WD +KPDGTPRKLMDSSKLA LGW P
Sbjct: 242 SGLEHVNIGSGQEVTIRELAELVKEVVGFEGKLGWDCTKPDGTPRKLMDSSKLASLGWTP 301

Query: 305 KISLKDGLVDTYKWYVQNV 324
           K+SL+DGL  TY WY++NV
Sbjct: 302 KVSLRDGLSQTYDWYLKNV 320

[Close]

BLAST of Sed0021443 vs. ExPASy Swiss-Prot
Match: Q67WR2 (Probable GDP-L-fucose synthase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0652400 PE=2 SV=1)

HSP 1 Score: 527.3 bits (1357), Expect = 1.2e-148
Identity = 250/322 (77.64%), Postives = 290/322 (90.06%), Query Frame = 0


Query: 3   GAADNASSGSTFLSDKSAKIFVAGYRGLVGSAIVRKLQNLGFTNLLLRSHSDLDLTRQSD 62
           G    A   ++FL+DK  K+FVAG+RGLVGSAI+R L +LGFTN+++R+H++LDLTRQSD
Sbjct: 2   GTVTTADPHASFLADKGGKVFVAGHRGLVGSAILRHLVSLGFTNVVVRTHAELDLTRQSD 61

Query: 63  VESFFATEKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRNG-VQKLLFL 122
           VE+FFA E PR+V+LAAAKVGGIHAN+T+PADFIA NLQIQTNV+D+A + G V+KLLFL
Sbjct: 62  VEAFFAAELPRYVVLAAAKVGGIHANSTFPADFIAANLQIQTNVVDAALKCGSVRKLLFL 121

Query: 123 GSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQYNWDAISGMPTN 182
           GSSCIYPKFAPQPIPE++LL+GPLEPTNEWYAVAKIAGIKMCQAYRIQ+ +DAIS MPTN
Sbjct: 122 GSSCIYPKFAPQPIPENSLLSGPLEPTNEWYAVAKIAGIKMCQAYRIQHGFDAISAMPTN 181

Query: 183 LYGPNDNFHPENSHVLPALMRRFHEAKVNAAKEVVVWGSGSPLREFLHVDDLADAVVFLM 242
           LYGP DNFHPENSHVLPAL+RRFHEAK + A EVVVWG+GSPLREFLHVDDLADAV+FLM
Sbjct: 182 LYGPQDNFHPENSHVLPALIRRFHEAKASNAAEVVVWGTGSPLREFLHVDDLADAVIFLM 241

Query: 243 EEYSGLGHVNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAGLG 302
           + YSGL HVNVGSG EV+IKELAELVKEVVGF+G LVWD SKPDGTPRKLMDSSK+  +G
Sbjct: 242 DHYSGLEHVNVGSGSEVTIKELAELVKEVVGFQGKLVWDSSKPDGTPRKLMDSSKIQEMG 301

Query: 303 WNPKISLKDGLVDTYKWYVQNV 324
           W PK+ LK+GLV+TYKWYV+NV
Sbjct: 302 WKPKVPLKEGLVETYKWYVENV 323

[Close]

BLAST of Sed0021443 vs. ExPASy Swiss-Prot
Match: Q67WR5 (Putative GDP-L-fucose synthase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0652300 PE=3 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 4.6e-108
Identity = 185/318 (58.18%), Postives = 247/318 (77.67%), Query Frame = 0


Query: 6   DNASSGSTFLSDKSAKIFVAGYRGLVGSAIVRKLQNLGFTNLLLRSHSDLDLTRQSDVES 65
           D  ++  +FL DKSAK+F+AG+RG+VGSA+ RKL  LGFTN+++R+ ++LDL  Q+ VE+
Sbjct: 21  DGDAAAVSFLGDKSAKVFIAGHRGMVGSAVHRKLDALGFTNVVVRTRAELDLACQAAVEA 80

Query: 66  FFATEKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRNG-VQKLLFLGSS 125
           FFA E PR+VILAAAKVGG+HA++  PA+++  NL+I  NV+D+A R G V+KLL L SS
Sbjct: 81  FFAAELPRYVILAAAKVGGVHASSAAPAEYLTENLRITVNVVDAARRCGSVRKLLVLASS 140

Query: 126 CIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQYNWDAISGMPTNLYG 185
            IYP  APQP PE ALLTGP    +EWYA+ KIAGIKMCQA R +Y  DAI+  P NLYG
Sbjct: 141 TIYPADAPQPTPESALLTGPPAEGSEWYAIPKIAGIKMCQAVRAEYGLDAIAAAPNNLYG 200

Query: 186 PNDNFHPENSHVLPALMRRFHEAKVNAAKEVVVWGSGSPLREFLHVDDLADAVVFLMEEY 245
           P   F PE+SHV+PAL+RRFH AK+  A EV VWGSG+  REF HVDDLA+AVV LME Y
Sbjct: 201 PRHPFPPEHSHVIPALIRRFHRAKLEGAGEVAVWGSGAAAREFTHVDDLAEAVVVLMERY 260

Query: 246 SGLGHVNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAGLGWNP 305
           SG  HVNVGSG+EV+++ELAE V+ VVG+EG + WD ++P+G  R+++DS ++  LGW P
Sbjct: 261 SGEEHVNVGSGEEVTVRELAEAVRGVVGYEGVVAWDAARPEGVARRVVDSGRMRKLGWEP 320

Query: 306 KISLKDGLVDTYKWYVQN 323
           +++L+DG+ D Y++Y+++
Sbjct: 321 RVALRDGIQDLYRFYLRH 338

[Close]

BLAST of Sed0021443 vs. ExPASy Swiss-Prot
Match: P55353 (GDP-L-fucose synthase OS=Sinorhizobium fredii (strain NBRC 101917 / NGR234) OX=394 GN=fcl PE=3 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 4.5e-103
Identity = 180/303 (59.41%), Postives = 234/303 (77.23%), Query Frame = 0


Query: 21  KIFVAGYRGLVGSAIVRKLQNLGFTNLLLRSHSDLDLTRQSDVESFFATEKPRFVILAAA 80
           +I+VAG++G+VGSAI+R L +     +++     LDLTRQ +VE F   EKP  VI+AAA
Sbjct: 10  RIWVAGHKGMVGSAIIRSLASED-CEVIVADRQKLDLTRQEEVEKFLLKEKPHAVIMAAA 69

Query: 81  KVGGIHANNTYPADFIAINLQIQTNVIDSAYRNGVQKLLFLGSSCIYPKFAPQPIPEDAL 140
           KVGGI AN+T PADFI  NL ++ NVI+ ++R+GV+KLLFLGSSCIYPK+A QPI E+AL
Sbjct: 70  KVGGILANDTMPADFIYQNLIMEANVIEGSFRSGVEKLLFLGSSCIYPKYAAQPIREEAL 129

Query: 141 LTGPLEPTNEWYAVAKIAGIKMCQAYRIQYNWDAISGMPTNLYGPNDNFHPENSHVLPAL 200
           LTGPLEPTNEWYA+AKIAGIK+CQAYR QY  + IS MPTNLYGP D F   +SHV+PAL
Sbjct: 130 LTGPLEPTNEWYAIAKIAGIKLCQAYRKQYGANFISAMPTNLYGPRDKFDLNSSHVVPAL 189

Query: 201 MRRFHEAKVNAAKEVVVWGSGSPLREFLHVDDLADAVVFLMEEYSGLGHVNVGSGKEVSI 260
           +R+ HEAK+     + +WGSG+P R+FL+ +D +DA+VFL++ YS   H+N+GSG E+SI
Sbjct: 190 IRKAHEAKIKDLGCLSIWGSGTPTRDFLYSEDCSDALVFLLKHYSETEHINIGSGGEISI 249

Query: 261 KELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAGLGWNPKISLKDGLVDTYKWYV 320
            ELA +V  VVGF+GD+V+D SKPDGTPRKL+ S +L  +GW PK SL+ GL  +Y+ +V
Sbjct: 250 IELAHIVCRVVGFKGDIVFDTSKPDGTPRKLLSSERLVSMGWRPKTSLELGLAKSYESFV 309

Query: 321 QNV 324
            NV
Sbjct: 310 SNV 311

[Close]

BLAST of Sed0021443 vs. ExPASy TrEMBL
Match: A0A6J1G3B1 (GDP-L-fucose synthase OS=Cucurbita moschata OX=3662 GN=LOC111450399 PE=3 SV=1)

HSP 1 Score: 636.0 bits (1639), Expect = 8.9e-179
Identity = 312/325 (96.00%), Postives = 318/325 (97.85%), Query Frame = 0


Query: 1   MGGAADNASSGSTFLSDKSAKIFVAGYRGLVGSAIVRKLQNLGFTNLLLRSHSDLDLTRQ 60
           MGGAADN SSGS+FLSDKSAKIFVAG+RGLVGSAIVRKLQ LGFTNLLLRSHS+LDLTRQ
Sbjct: 1   MGGAADNVSSGSSFLSDKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQ 60

Query: 61  SDVESFFATEKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRNGVQKLLF 120
           SDVESFFA EKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYR+GVQKLLF
Sbjct: 61  SDVESFFANEKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRHGVQKLLF 120

Query: 121 LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQYNWDAISGMPT 180
           LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQ+NW+AISGMPT
Sbjct: 121 LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQHNWNAISGMPT 180

Query: 181 NLYGPNDNFHPENSHVLPALMRRFHEAKVNAAKEVVVWGSGSPLREFLHVDDLADAVVFL 240
           NLYGPNDNFHPENSHVLPALMRRFHEAKVN AKEVVVWGSGSPLREFLHVDDLADAV FL
Sbjct: 181 NLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGSGSPLREFLHVDDLADAVAFL 240

Query: 241 MEEYSGLGHVNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAGL 300
           MEEYS LGHVNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLA L
Sbjct: 241 MEEYSDLGHVNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAEL 300

Query: 301 GWNPKISLKDGLVDTYKWYVQNVQQ 326
           GWNPKISLKDGLVDTYKWYVQNVQQ
Sbjct: 301 GWNPKISLKDGLVDTYKWYVQNVQQ 325

[Close]

BLAST of Sed0021443 vs. ExPASy TrEMBL
Match: A0A6J1KKK7 (GDP-L-fucose synthase OS=Cucurbita maxima OX=3661 GN=LOC111493996 PE=3 SV=1)

HSP 1 Score: 633.3 bits (1632), Expect = 5.8e-178
Identity = 309/325 (95.08%), Postives = 318/325 (97.85%), Query Frame = 0


Query: 1   MGGAADNASSGSTFLSDKSAKIFVAGYRGLVGSAIVRKLQNLGFTNLLLRSHSDLDLTRQ 60
           MGGAADNASSGS+FLSDKSAKIF+AG+RGLVGSAIVRKLQ LGFTNLLLRSHS+LDLTRQ
Sbjct: 1   MGGAADNASSGSSFLSDKSAKIFIAGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQ 60

Query: 61  SDVESFFATEKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRNGVQKLLF 120
           SDVESFFA EKPRF ILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYR+GVQKLLF
Sbjct: 61  SDVESFFANEKPRFAILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRHGVQKLLF 120

Query: 121 LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQYNWDAISGMPT 180
           LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQ+NW+AISGMPT
Sbjct: 121 LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQHNWNAISGMPT 180

Query: 181 NLYGPNDNFHPENSHVLPALMRRFHEAKVNAAKEVVVWGSGSPLREFLHVDDLADAVVFL 240
           NLYGPNDNFHPENSHVLPALMRRFHEAKVN AKEVVVWGSGSPLREFLHVDDLADAV FL
Sbjct: 181 NLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGSGSPLREFLHVDDLADAVAFL 240

Query: 241 MEEYSGLGHVNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAGL 300
           MEEYS LGHVNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLA L
Sbjct: 241 MEEYSDLGHVNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAEL 300

Query: 301 GWNPKISLKDGLVDTYKWYVQNVQQ 326
           GWNP+ISL+DGLVDTYKWYVQNVQQ
Sbjct: 301 GWNPRISLRDGLVDTYKWYVQNVQQ 325

[Close]

BLAST of Sed0021443 vs. ExPASy TrEMBL
Match: A0A1S3BTW0 (GDP-L-fucose synthase OS=Cucumis melo OX=3656 GN=LOC103493500 PE=3 SV=1)

HSP 1 Score: 632.5 bits (1630), Expect = 9.8e-178
Identity = 311/325 (95.69%), Postives = 316/325 (97.23%), Query Frame = 0


Query: 1   MGGAADNASSGSTFLSDKSAKIFVAGYRGLVGSAIVRKLQNLGFTNLLLRSHSDLDLTRQ 60
           MGGAADNASSGS+FL DKSAKIFVAG+RGLVGSAIVRKLQ LGFTNLLLRSHS+LDLTRQ
Sbjct: 1   MGGAADNASSGSSFLFDKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQ 60

Query: 61  SDVESFFATEKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRNGVQKLLF 120
           SDVESFFA EKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYR GV+KLLF
Sbjct: 61  SDVESFFANEKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRYGVEKLLF 120

Query: 121 LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQYNWDAISGMPT 180
           LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQY WDAISGMPT
Sbjct: 121 LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQYKWDAISGMPT 180

Query: 181 NLYGPNDNFHPENSHVLPALMRRFHEAKVNAAKEVVVWGSGSPLREFLHVDDLADAVVFL 240
           NLYGPNDNFHPENSHVLPALMRRFHEAKV  AKEVVVWGSGSPLREFLHVDDLADAVVFL
Sbjct: 181 NLYGPNDNFHPENSHVLPALMRRFHEAKVKGAKEVVVWGSGSPLREFLHVDDLADAVVFL 240

Query: 241 MEEYSGLGHVNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAGL 300
           MEEYS LGH+NVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLA L
Sbjct: 241 MEEYSDLGHLNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAEL 300

Query: 301 GWNPKISLKDGLVDTYKWYVQNVQQ 326
           GWNPKISLKDGLVDTYKWYVQNVQQ
Sbjct: 301 GWNPKISLKDGLVDTYKWYVQNVQQ 325

[Close]

BLAST of Sed0021443 vs. ExPASy TrEMBL
Match: A0A0A0LH41 (GDP-L-fucose synthase OS=Cucumis sativus OX=3659 GN=Csa_2G036660 PE=3 SV=1)

HSP 1 Score: 631.7 bits (1628), Expect = 1.7e-177
Identity = 310/325 (95.38%), Postives = 316/325 (97.23%), Query Frame = 0


Query: 1   MGGAADNASSGSTFLSDKSAKIFVAGYRGLVGSAIVRKLQNLGFTNLLLRSHSDLDLTRQ 60
           MGGAADNASSGS+FL DKSAKIFVAG+RGLVGSAIVRKLQ LGFTNL+LRSHS+LDLTRQ
Sbjct: 1   MGGAADNASSGSSFLFDKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLILRSHSELDLTRQ 60

Query: 61  SDVESFFATEKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRNGVQKLLF 120
           SDVESFFA EKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYR GV+KLLF
Sbjct: 61  SDVESFFANEKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRYGVEKLLF 120

Query: 121 LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQYNWDAISGMPT 180
           LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQY WDAISGMPT
Sbjct: 121 LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQYKWDAISGMPT 180

Query: 181 NLYGPNDNFHPENSHVLPALMRRFHEAKVNAAKEVVVWGSGSPLREFLHVDDLADAVVFL 240
           NLYGPNDNFHPENSHVLPALMRRFHEAKV  AKEVVVWGSGSPLREFLHVDDLADAVVFL
Sbjct: 181 NLYGPNDNFHPENSHVLPALMRRFHEAKVKGAKEVVVWGSGSPLREFLHVDDLADAVVFL 240

Query: 241 MEEYSGLGHVNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAGL 300
           MEEYS LGH+NVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLA L
Sbjct: 241 MEEYSDLGHLNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAEL 300

Query: 301 GWNPKISLKDGLVDTYKWYVQNVQQ 326
           GWNPKISLKDGLVDTYKWYVQNVQQ
Sbjct: 301 GWNPKISLKDGLVDTYKWYVQNVQQ 325

[Close]

BLAST of Sed0021443 vs. ExPASy TrEMBL
Match: A0A5D3BBR3 (GDP-L-fucose synthase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G00200 PE=3 SV=1)

HSP 1 Score: 631.3 bits (1627), Expect = 2.2e-177
Identity = 310/325 (95.38%), Postives = 316/325 (97.23%), Query Frame = 0


Query: 1   MGGAADNASSGSTFLSDKSAKIFVAGYRGLVGSAIVRKLQNLGFTNLLLRSHSDLDLTRQ 60
           MGGAADN+SSGS+FL DKSAKIFVAG+RGLVGSAIVRKLQ LGFTNLLLRSHS+LDLTRQ
Sbjct: 1   MGGAADNSSSGSSFLFDKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQ 60

Query: 61  SDVESFFATEKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRNGVQKLLF 120
           SDVESFFA EKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYR GV+KLLF
Sbjct: 61  SDVESFFANEKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRYGVEKLLF 120

Query: 121 LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQYNWDAISGMPT 180
           LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQY WDAISGMPT
Sbjct: 121 LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQYKWDAISGMPT 180

Query: 181 NLYGPNDNFHPENSHVLPALMRRFHEAKVNAAKEVVVWGSGSPLREFLHVDDLADAVVFL 240
           NLYGPNDNFHPENSHVLPALMRRFHEAKV  AKEVVVWGSGSPLREFLHVDDLADAVVFL
Sbjct: 181 NLYGPNDNFHPENSHVLPALMRRFHEAKVKGAKEVVVWGSGSPLREFLHVDDLADAVVFL 240

Query: 241 MEEYSGLGHVNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAGL 300
           MEEYS LGH+NVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLA L
Sbjct: 241 MEEYSDLGHLNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAEL 300

Query: 301 GWNPKISLKDGLVDTYKWYVQNVQQ 326
           GWNPKISLKDGLVDTYKWYVQNVQQ
Sbjct: 301 GWNPKISLKDGLVDTYKWYVQNVQQ 325

[Close]

BLAST of Sed0021443 vs. TAIR 10
Match: AT1G17890.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 555.4 bits (1430), Expect = 2.9e-158
Identity = 270/324 (83.33%), Postives = 293/324 (90.43%), Query Frame = 0


Query: 5   ADNASS---GSTFLSDKSAKIFVAGYRGLVGSAIVRKLQNLGFTNLLLRSHSDLDLTRQS 64
           ADN  S     +F+ +KSAKIFVAG+RGLVGSAIVRKLQ+ GFTNL+LR+HS+LDLT QS
Sbjct: 2   ADNTGSEMKSGSFMLEKSAKIFVAGHRGLVGSAIVRKLQDQGFTNLVLRTHSELDLTSQS 61

Query: 65  DVESFFATEKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRNGVQKLLFL 124
           DVESFFATEKP +VILAAAKVGGIHANNTYPADFI +NLQIQTNVI SAY +GV+KLLFL
Sbjct: 62  DVESFFATEKPVYVILAAAKVGGIHANNTYPADFIGVNLQIQTNVIHSAYTHGVKKLLFL 121

Query: 125 GSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQYNWDAISGMPTN 184
           GSSCIYPKFAPQPIPE ALLTGPLEPTNEWYA+AKIAGIKMCQAYR+Q+ WDAISGMPTN
Sbjct: 122 GSSCIYPKFAPQPIPESALLTGPLEPTNEWYAIAKIAGIKMCQAYRLQHQWDAISGMPTN 181

Query: 185 LYGPNDNFHPENSHVLPALMRRFHEAKVNAAKEVVVWGSGSPLREFLHVDDLADAVVFLM 244
           LYG NDNFHPENSHVLPALMRRFHEAK N A EVVVWGSGSPLREFLHVDDLADA VFLM
Sbjct: 182 LYGQNDNFHPENSHVLPALMRRFHEAKANNADEVVVWGSGSPLREFLHVDDLADACVFLM 241

Query: 245 EEYSGLGHVNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAGLG 304
           ++YSG  HVNVGSG EV+IKELAELVKEVVGF+G LVWD +KPDGTPRKLMDSSKLA LG
Sbjct: 242 DQYSGFEHVNVGSGVEVTIKELAELVKEVVGFKGKLVWDTTKPDGTPRKLMDSSKLASLG 301

Query: 305 WNPKISLKDGLVDTYKWYVQNVQQ 326
           W PKISLKDGL  TY+WY++NV Q
Sbjct: 302 WTPKISLKDGLSQTYEWYLENVVQ 325

[Close]

BLAST of Sed0021443 vs. TAIR 10
Match: AT1G17890.2 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 554.3 bits (1427), Expect = 6.5e-158
Identity = 269/316 (85.13%), Postives = 291/316 (92.09%), Query Frame = 0


Query: 10  SGSTFLSDKSAKIFVAGYRGLVGSAIVRKLQNLGFTNLLLRSHSDLDLTRQSDVESFFAT 69
           SGS F+ +KSAKIFVAG+RGLVGSAIVRKLQ+ GFTNL+LR+HS+LDLT QSDVESFFAT
Sbjct: 3   SGS-FMLEKSAKIFVAGHRGLVGSAIVRKLQDQGFTNLVLRTHSELDLTSQSDVESFFAT 62

Query: 70  EKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRNGVQKLLFLGSSCIYPK 129
           EKP +VILAAAKVGGIHANNTYPADFI +NLQIQTNVI SAY +GV+KLLFLGSSCIYPK
Sbjct: 63  EKPVYVILAAAKVGGIHANNTYPADFIGVNLQIQTNVIHSAYTHGVKKLLFLGSSCIYPK 122

Query: 130 FAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQYNWDAISGMPTNLYGPNDNF 189
           FAPQPIPE ALLTGPLEPTNEWYA+AKIAGIKMCQAYR+Q+ WDAISGMPTNLYG NDNF
Sbjct: 123 FAPQPIPESALLTGPLEPTNEWYAIAKIAGIKMCQAYRLQHQWDAISGMPTNLYGQNDNF 182

Query: 190 HPENSHVLPALMRRFHEAKVNAAKEVVVWGSGSPLREFLHVDDLADAVVFLMEEYSGLGH 249
           HPENSHVLPALMRRFHEAK N A EVVVWGSGSPLREFLHVDDLADA VFLM++YSG  H
Sbjct: 183 HPENSHVLPALMRRFHEAKANNADEVVVWGSGSPLREFLHVDDLADACVFLMDQYSGFEH 242

Query: 250 VNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAGLGWNPKISLK 309
           VNVGSG EV+IKELAELVKEVVGF+G LVWD +KPDGTPRKLMDSSKLA LGW PKISLK
Sbjct: 243 VNVGSGVEVTIKELAELVKEVVGFKGKLVWDTTKPDGTPRKLMDSSKLASLGWTPKISLK 302

Query: 310 DGLVDTYKWYVQNVQQ 326
           DGL  TY+WY++NV Q
Sbjct: 303 DGLSQTYEWYLENVVQ 317

[Close]

BLAST of Sed0021443 vs. TAIR 10
Match: AT1G17890.3 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 554.3 bits (1427), Expect = 6.5e-158
Identity = 269/316 (85.13%), Postives = 291/316 (92.09%), Query Frame = 0


Query: 10  SGSTFLSDKSAKIFVAGYRGLVGSAIVRKLQNLGFTNLLLRSHSDLDLTRQSDVESFFAT 69
           SGS F+ +KSAKIFVAG+RGLVGSAIVRKLQ+ GFTNL+LR+HS+LDLT QSDVESFFAT
Sbjct: 3   SGS-FMLEKSAKIFVAGHRGLVGSAIVRKLQDQGFTNLVLRTHSELDLTSQSDVESFFAT 62

Query: 70  EKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRNGVQKLLFLGSSCIYPK 129
           EKP +VILAAAKVGGIHANNTYPADFI +NLQIQTNVI SAY +GV+KLLFLGSSCIYPK
Sbjct: 63  EKPVYVILAAAKVGGIHANNTYPADFIGVNLQIQTNVIHSAYTHGVKKLLFLGSSCIYPK 122

Query: 130 FAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQYNWDAISGMPTNLYGPNDNF 189
           FAPQPIPE ALLTGPLEPTNEWYA+AKIAGIKMCQAYR+Q+ WDAISGMPTNLYG NDNF
Sbjct: 123 FAPQPIPESALLTGPLEPTNEWYAIAKIAGIKMCQAYRLQHQWDAISGMPTNLYGQNDNF 182

Query: 190 HPENSHVLPALMRRFHEAKVNAAKEVVVWGSGSPLREFLHVDDLADAVVFLMEEYSGLGH 249
           HPENSHVLPALMRRFHEAK N A EVVVWGSGSPLREFLHVDDLADA VFLM++YSG  H
Sbjct: 183 HPENSHVLPALMRRFHEAKANNADEVVVWGSGSPLREFLHVDDLADACVFLMDQYSGFEH 242

Query: 250 VNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAGLGWNPKISLK 309
           VNVGSG EV+IKELAELVKEVVGF+G LVWD +KPDGTPRKLMDSSKLA LGW PKISLK
Sbjct: 243 VNVGSGVEVTIKELAELVKEVVGFKGKLVWDTTKPDGTPRKLMDSSKLASLGWTPKISLK 302

Query: 310 DGLVDTYKWYVQNVQQ 326
           DGL  TY+WY++NV Q
Sbjct: 303 DGLSQTYEWYLENVVQ 317

[Close]

BLAST of Sed0021443 vs. TAIR 10
Match: AT1G73250.1 (GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase 1 )

HSP 1 Score: 543.1 bits (1398), Expect = 1.5e-154
Identity = 259/319 (81.19%), Postives = 289/319 (90.60%), Query Frame = 0


Query: 5   ADNASSGSTFLSDKSAKIFVAGYRGLVGSAIVRKLQNLGFTNLLLRSHSDLDLTRQSDVE 64
           A+   S  + +SDKSAKIFVAG+RGLVGSAIVRKLQ  GFTNL+L++H++LDLTRQ+DVE
Sbjct: 2   AETIGSEVSSMSDKSAKIFVAGHRGLVGSAIVRKLQEQGFTNLVLKTHAELDLTRQADVE 61

Query: 65  SFFATEKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRNGVQKLLFLGSS 124
           SFF+ EKP +VILAAAKVGGIHANNTYPADFI +NLQIQTNVI SAY +GV+KLLFLGSS
Sbjct: 62  SFFSQEKPVYVILAAAKVGGIHANNTYPADFIGVNLQIQTNVIHSAYEHGVKKLLFLGSS 121

Query: 125 CIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQYNWDAISGMPTNLYG 184
           CIYPKFAPQPIPE ALLT  LEPTNEWYA+AKIAGIK CQAYRIQ+ WDAISGMPTNLYG
Sbjct: 122 CIYPKFAPQPIPESALLTASLEPTNEWYAIAKIAGIKTCQAYRIQHGWDAISGMPTNLYG 181

Query: 185 PNDNFHPENSHVLPALMRRFHEAKVNAAKEVVVWGSGSPLREFLHVDDLADAVVFLMEEY 244
           PNDNFHPENSHVLPALMRRFHEAKVN A+EVVVWG+GSPLREFLHVDDLADA VFL++ Y
Sbjct: 182 PNDNFHPENSHVLPALMRRFHEAKVNGAEEVVVWGTGSPLREFLHVDDLADACVFLLDRY 241

Query: 245 SGLGHVNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAGLGWNP 304
           SGL HVN+GSG+EV+I+ELAELVKEVVGFEG L WD +KPDGTPRKLMDSSKLA LGW P
Sbjct: 242 SGLEHVNIGSGQEVTIRELAELVKEVVGFEGKLGWDCTKPDGTPRKLMDSSKLASLGWTP 301

Query: 305 KISLKDGLVDTYKWYVQNV 324
           K+SL+DGL  TY WY++NV
Sbjct: 302 KVSLRDGLSQTYDWYLKNV 320

[Close]

BLAST of Sed0021443 vs. TAIR 10
Match: AT5G28840.1 (GDP-D-mannose 3',5'-epimerase )

HSP 1 Score: 100.9 bits (250), Expect = 2.0e-21
Identity = 81/326 (24.85%), Postives = 143/326 (43.87%), Query Frame = 0


Query: 18  KSAKIFVAGYRGLVGSAIVRKLQNLGFTNLLLRSHSDLDLTRQSDVESFF---------- 77
           ++ KI + G  G + S I R+L++ G   +      +  +T     + F           
Sbjct: 26  ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENC 85

Query: 78  --ATEKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRNGVQKLLFLGSSC 137
              TE    V   AA +GG+    +  +  +  N  I  N+I++A  NG+++  +  S+C
Sbjct: 86  LKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSAC 145

Query: 138 IYPKFAPQPIPEDALLTG---PLEPTNEWYAVAKIAGIKMCQAYRIQYNWDAISGMPTNL 197
           IYP+F        +L      P EP  + Y + K+A  ++C+ Y   +  +   G   N+
Sbjct: 146 IYPEFKQLETTNVSLKESDAWPAEP-QDAYGLEKLATEELCKHYNKDFGIECRIGRFHNI 205

Query: 198 YGPNDNFHPENSHVLPALMRRFHEAKVNAAKEVVVWGSGSPLREFLHVDDLADAVVFLME 257
           YGP   +         A  R+       +     +WG G   R F  +D+  + V+ L +
Sbjct: 206 YGPFGTWKGGREKAPAAFCRKAQ----TSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTK 265

Query: 258 EYSGLGHVNVGSGKEVSIKELAELVKEVVGFEGDL--VWDKSKPDGTPRKLMDSSKL-AG 317
                  VN+GS + VS+ E+AE+   V+ FE     +     P+G   +  D++ +   
Sbjct: 266 S-DFREPVNIGSDEMVSMNEMAEM---VLSFEEKKLPIHHIPGPEGVRGRNSDNNLIKEK 325

Query: 318 LGWNPKISLKDGLVDTYKWYVQNVQQ 326
           LGW P + LK+GL  TY W  + +++
Sbjct: 326 LGWAPNMRLKEGLRITYFWIKEQIEK 342

The following BLAST results are available for this feature:

BLAST of Sed0021443 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023521193.1	6.3e-179	96.31	putative GDP-L-fucose synthase 2 [Cucurbita pepo subsp. pepo] >KAG7030077.1 puta...	[more]
XP_022946263.1	1.8e-178	96.00	putative GDP-L-fucose synthase 2 [Cucurbita moschata]	[more]
XP_022999738.1	1.2e-177	95.08	putative GDP-L-fucose synthase 2 [Cucurbita maxima]	[more]
XP_008452484.1	2.0e-177	95.69	PREDICTED: putative GDP-L-fucose synthase 2 [Cucumis melo] >XP_016902552.1 PREDI...	[more]
XP_004144717.1	3.5e-177	95.38	putative GDP-L-fucose synthase 2 [Cucumis sativus] >KGN61068.1 hypothetical prot...	[more]

BLAST of Sed0021443 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LMU0	4.1e-157	83.33	Putative GDP-L-fucose synthase 2 OS=Arabidopsis thaliana OX=3702 GN=GER2 PE=1 SV...	[more]
O49213	2.1e-153	81.19	GDP-L-fucose synthase 1 OS=Arabidopsis thaliana OX=3702 GN=GER1 PE=1 SV=3	[more]
Q67WR2	1.2e-148	77.64	Probable GDP-L-fucose synthase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os0...	[more]
Q67WR5	4.6e-108	58.18	Putative GDP-L-fucose synthase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os0...	[more]
P55353	4.5e-103	59.41	GDP-L-fucose synthase OS=Sinorhizobium fredii (strain NBRC 101917 / NGR234) OX=3...	[more]

BLAST of Sed0021443 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G3B1	8.9e-179	96.00	GDP-L-fucose synthase OS=Cucurbita moschata OX=3662 GN=LOC111450399 PE=3 SV=1	[more]
A0A6J1KKK7	5.8e-178	95.08	GDP-L-fucose synthase OS=Cucurbita maxima OX=3661 GN=LOC111493996 PE=3 SV=1	[more]
A0A1S3BTW0	9.8e-178	95.69	GDP-L-fucose synthase OS=Cucumis melo OX=3656 GN=LOC103493500 PE=3 SV=1	[more]
A0A0A0LH41	1.7e-177	95.38	GDP-L-fucose synthase OS=Cucumis sativus OX=3659 GN=Csa_2G036660 PE=3 SV=1	[more]
A0A5D3BBR3	2.2e-177	95.38	GDP-L-fucose synthase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold54...	[more]

BLAST of Sed0021443 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G17890.1	2.9e-158	83.33	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT1G17890.2	6.5e-158	85.13	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT1G17890.3	6.5e-158	85.13	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT1G73250.1	1.5e-154	81.19	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase 1	[more]
AT5G28840.1	2.0e-21	24.85	GDP-D-mannose 3',5'-epimerase	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.720		coord: 23..306 e-value: 2.5E-125 score: 420.0
None	No IPR available	GENE3D	3.90.25.10		coord: 184..319 e-value: 2.5E-125 score: 420.0
None	No IPR available	PANTHER	PTHR43238	GDP-L-FUCOSE SYNTHASE	coord: 8..325
None	No IPR available	PANTHER	PTHR43238:SF5	GDP-L-FUCOSE SYNTHASE 2-RELATED	coord: 8..325
IPR001509	NAD-dependent epimerase/dehydratase	PFAM	PF01370	Epimerase	coord: 22..253 e-value: 9.6E-74 score: 247.9
IPR028614	GDP-L-fucose synthase/GDP-L-colitose synthase	HAMAP	MF_00956	GDP_fucose_synth	coord: 19..321 score: 51.031807
IPR028614	GDP-L-fucose synthase/GDP-L-colitose synthase	CDD	cd05239	GDP_FS_SDR_e	coord: 21..319 e-value: 0.0 score: 535.239
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 18..323

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0021443.1	Sed0021443.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042351	'de novo' GDP-L-fucose biosynthetic process
biological_process	GO:0009226	nucleotide-sugar biosynthetic process
molecular_function	GO:0050577	GDP-L-fucose synthase activity
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0016491	oxidoreductase activity