Sed0021365 (gene) Chayote v1

Overview


Name	Sed0021365
Type	gene
Organism	Sechium edule (Chayote v1)
Description	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like
Location	LG05: 32539711 .. 32543550 (-)
RNA-Seq Expression	Sed0021365
Synteny	Sed0021365

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTTCTCCCTATTCATTTCACCAACAAAATTAAATTCCCTTAGAAATTTTGTTTTCCTTATTTAACAAAACTAAGTTCATCTTTTGATCCATTTCATCACATCACCAAAGTTTTAGAGACCCAAAAAAGAAATTATGGCTAAGAAAGGAAGCAAAGATTTATGTGAAGGATCTTCATCAAGTTCTTCCCCACAACTACTTGCAAGTGGAACAATTCCAAGTAGATATGAGTCCCAAAAAAGAAGGGATTGGAACACATTTTGCCAATATTTAAAGAATCAAAGGCCCCCAATTTCTCTTTCTCATTGTAGTGGCCACCAAGTTTTGGAGTTTTTAAGGTACCTTGATCAATTTGGTAAGACAAAAGTTCATCTTCAAGGTTGCATATTTTATGGGCAGCTTGAACCACCTGCCCCTTGTACTTGCCCTTTAAGGCAAGCTTGGGGCAGTTTGGATGCCCTAATTGGGAGGGCAGCTTATGAAGAAAATGGTGGCTCCCAAGAGACAAATCCTTTTGCAAGTGGAGCAATTAGGGTTTATCTCAGGGAAGTTAGGGAGTGTCAAGCTAAAGCAAGAGGAATTTCTTACAAGAAGAAGAAGAAGAGTACTACTAATCAAATCAAAGGAGCAGAAGAATCAAGCTCCATATGATGTGCCTTGATTATTATGGTAATTAACTCTCTCATCAATTTTCATGATAGAAACCTAAATTCTTTATATGCACTGATATCATTTATTTTTTGTTCGGATTTAAATTTGATGATTATAGCTCAACAAGTATAAAGTATAGATTTAATTTCTTAAAAGATCGTGTATTTGAAAACTTCAATTCTCAAATATTATTAAACTATGAGATTCACTCTAAGAAAAAAGTTTATCGTTGACGATAAATTTTTTTAGCAATTGTCCTAAAACCGTTGGGGTGGAATCCCAGATAGAATTCTTGTTGCTGGCCAAGCCATCGACGACTCTTTCGTCGATAGTCCCTAAAAGAATGCTGGTGATTTTATCCTCGTTGACAATGAAACATATCGTCCACATATCTTATAAAGCGACATAAAGAATATATAAACTTGTGACTAAGGTTGTGTATTTGTTTTAAAACTCCAATCCTTAAATGTTGTTGAACACAAAAAAAATGATTGAGATTGGTAAAATTTAAAACATCCGACATTTATGGTAGAAAAATGATTGAGATTGGTAAAATTTAAAACATCTGACATTTAGGGTAGATGTATAGTGTTTTAAACCAATATTTGAGTTGTCAAACTATTTGCTTGTGTTATCATAATTTACTTAATTACCTTTGAAGGGGATATCTTTTGAAACAACTCAGCTATAAATGATTTGGGAAAACCAACTATATTTTATAGAATTTAGAGTTAACTATTAGTTAGTTCTAGAACAAAAAATTTATTAATTTAAGGTATTTCTTGTCTCTATAGAAAAATTTATATAAATTAAGGTATTTATTAATTTAAGGCACATTTTTTTTTATGAGTGATAAGACTCGAACCTACAATTCGAGAGTATATATCAATTATCACTCAGCATAGTCCATTTTAGCTATTTGTTTTTGTTCTGAACACTCTATAGAAACATTTTTGCATCTGAATGATTTATGTACCTTAATTAGGTGTTTTCTTCAAGGATTGTTTGTGAAGGTTTTTATTTTCTTTAATGAATGGTGCAAATATGCCAAGTGATATTTTTCATATGCTTTTATAAATCTTGTTGCTTTAGATTATTGTTGAAAGATAATGATTTAGGAAATTTCTCATGTCGTGTGTGTGACAGAAATAATCTCCTTAGTTATAATGTTTTCCAAAGTGATAAATTTTCATGTTTGCTCTATCGAAAGGGTTGATGACGTGCTATCTTAGTTGATTGGTCGTAATCCAATTCAACTTCACGATCACGGTTTAATGCTAAAAATCAATATTTGATTCTCTTCTTAATTTGAGAACAATATTACTCTCCACTCCCTAATTTGAATTTAAATAATAATAATAATAAGACTTCTAAGAGGAGGCCATCATCAAACCTCTATTTGCTTTATATGAGATACCAGCTATTATTGCTTTAATTGCTTAATTAGTGACACCCTAATTGCTTTTTGGTGTTTTCTAAAGGCACATTATTGAAAAACTAGTAGTTTTTATTTCATTTTATAGTGTTTAACCTTTGTACTGTGCATAGATTTGCTTCTTGTCCAATATTAGATTTTGTGGGACTAAAATTTATATTCCATCGTCCATATGTTTGGAGTTGAAAGTCTTTTTATATTACTTATTTGATTTCCCTCCTTTTTTTTCTTTTTTTTTCCCAAAAGTTTTCTTAAATTAATTATTTTCTTCATACTTTATATAAATTAGTTTATAAAAATAACTAGGGTTTTATTTTAATTGAACAAACCCATTAGTGATATTTCACTCATTAAATAATATACAGTTGGATTTAAAGTTTTTGACTAAAACGTGATTGAGCCTAAATAATAGACATATATTCTCGATCTAAGAGTAGTAGGATCGAATCACTCCATTAAATTGTACCAAAAAAAGTCCTCCTACCTATATTTTTTTCCCTGCCAGCATAAAAATGTTAGTTCTAATCAAGCATGTTTTCTAATTTCTATATATATATATATATATATTCCTTTTTGAGTTCTCACCAGCTACGTGAGAAGATAAGAAAATCGAACCCTAACTTTATTGGTCAATAATATCATGTTATATTTAGTTGGGGGCTAATTAGTTCAAGTTAGCATTTATGTATTTCTGATTAATGAAGGGTCATGTTATTTTATATCAATTCATTTATATAAACTTATATTTTCATCGTAGGTGTATCTATTAGGAGTTGAACTCATTATCTCTTAATTCTTCAAGCTCTTTTGATAGCTAGATCATTCTATGATGATTAATGGAGTGTGGTTAATCAAACTGATCACAACTTTTTGGTTACTCGATTATACATAATGCCATATTAGAAATTATAAGTTCCATATATGATAACCATTTATTATTTATTTTTTTATAGGTTTCTTTAAAAATAAAATAATTTGAAGTTAAATAATAGTTGTTTGGTGAAAATAATTAGGTGTAGATGAGTTGACCTTGTCTATTAAAAAGAATTCATTTTCTTTTTAATGAACATATGTATGTATCAAATTTGTTACCACATACCAAGCTAGTGGCTTTTGCTTCAAATTGGGCAATAGTTTCAACATTTCATCTGTATAATTGGCAGTTTTCAATTGTATACATAGAAAAAAACAACTTTTATTTTAGTATAATAAATGTGAAAGTGTGGAAATTTTTGTTCCAAACTCAAGGAATATATGTATGTCAATTATCTGTGGAATATATTCATATATTATACTCATATTTGATATAACTCTATCCAAATTTTTTTTTTTAATACAAAGTGCTTCTGAAGATTTGTATATATATTCATAATGGTTTTTTTTTTTTTTGAATTATTCTAACTACTTTATTAATTATGATATGTTTGCAGGGATTGTTAGACGAATTAAGGGACCAAAAAAAGTGAAGATTTTTCAAAAATGGGAGAAGAAATCATCAAGAATCTGTAATCGAATTCCATTGAAGACAACAGCTAGCACTTATGATATCAGAGAGTTTTCATTTCATTTTACCTTTTGAATTTCAGCCTTTCCATTAAAGCCTTTGCTATCTTAGAACTCTATATGTGCAAGCCTGTTTTTGTTTTGTACTTGTTTATGCTTCCATTTATTTGTTGTCTGCCTACTTCTATGCAACCTTGTAATGCAAAAAGATTCTTAATTAGCATTAAATTTGAATGATGTATTAATTTGTC

mRNA sequence

CTCTTCTCCCTATTCATTTCACCAACAAAATTAAATTCCCTTAGAAATTTTGTTTTCCTTATTTAACAAAACTAAGTTCATCTTTTGATCCATTTCATCACATCACCAAAGTTTTAGAGACCCAAAAAAGAAATTATGGCTAAGAAAGGAAGCAAAGATTTATGTGAAGGATCTTCATCAAGTTCTTCCCCACAACTACTTGCAAGTGGAACAATTCCAAGTAGATATGAGTCCCAAAAAAGAAGGGATTGGAACACATTTTGCCAATATTTAAAGAATCAAAGGCCCCCAATTTCTCTTTCTCATTGTAGTGGCCACCAAGTTTTGGAGTTTTTAAGGTACCTTGATCAATTTGGTAAGACAAAAGTTCATCTTCAAGGTTGCATATTTTATGGGCAGCTTGAACCACCTGCCCCTTGTACTTGCCCTTTAAGGCAAGCTTGGGGCAGTTTGGATGCCCTAATTGGGAGGGCAGCTTATGAAGAAAATGGTGGCTCCCAAGAGACAAATCCTTTTGCAAGTGGAGCAATTAGGGTTTATCTCAGGGAAGTTAGGGAGTGTCAAGCTAAAGCAAGAGGAATTTCTTACAAGAAGAAGAAGAAGAGTACTACTAATCAAATCAAAGGAGCAGAAGAATCAAGCTCCATATGATGTGCCTTGATTATTATGGGATTGTTAGACGAATTAAGGGACCAAAAAAAGTGAAGATTTTTCAAAAATGGGAGAAGAAATCATCAAGAATCTGTAATCGAATTCCATTGAAGACAACAGCTAGCACTTATGATATCAGAGAGTTTTCATTTCATTTTACCTTTTGAATTTCAGCCTTTCCATTAAAGCCTTTGCTATCTTAGAACTCTATATGTGCAAGCCTGTTTTTGTTTTGTACTTGTTTATGCTTCCATTTATTTGTTGTCTGCCTACTTCTATGCAACCTTGTAATGCAAAAAGATTCTTAATTAGCATTAAATTTGAATGATGTATTAATTTGTC

Coding sequence (CDS)

ATGGCTAAGAAAGGAAGCAAAGATTTATGTGAAGGATCTTCATCAAGTTCTTCCCCACAACTACTTGCAAGTGGAACAATTCCAAGTAGATATGAGTCCCAAAAAAGAAGGGATTGGAACACATTTTGCCAATATTTAAAGAATCAAAGGCCCCCAATTTCTCTTTCTCATTGTAGTGGCCACCAAGTTTTGGAGTTTTTAAGGTACCTTGATCAATTTGGTAAGACAAAAGTTCATCTTCAAGGTTGCATATTTTATGGGCAGCTTGAACCACCTGCCCCTTGTACTTGCCCTTTAAGGCAAGCTTGGGGCAGTTTGGATGCCCTAATTGGGAGGGCAGCTTATGAAGAAAATGGTGGCTCCCAAGAGACAAATCCTTTTGCAAGTGGAGCAATTAGGGTTTATCTCAGGGAAGTTAGGGAGTGTCAAGCTAAAGCAAGAGGAATTTCTTACAAGAAGAAGAAGAAGAGTACTACTAATCAAATCAAAGGAGCAGAAGAATCAAGCTCCATATGA

Protein sequence

MAKKGSKDLCEGSSSSSSPQLLASGTIPSRYESQKRRDWNTFCQYLKNQRPPISLSHCSGHQVLEFLRYLDQFGKTKVHLQGCIFYGQLEPPAPCTCPLRQAWGSLDALIGRAAYEENGGSQETNPFASGAIRVYLREVRECQAKARGISYKKKKKSTTNQIKGAEESSSI

Homology

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BLAST of Sed0021365 vs. NCBI nr
Match: XP_022988968.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Cucurbita maxima])

HSP 1 Score: 281.6 bits (719), Expect = 4.6e-72
Identity = 142/170 (83.53%), Postives = 153/170 (90.00%), Query Frame = 0


Query: 5   GSKDLCEGSSSSSSPQLLASGTIPSRYESQKRRDWNTFCQYLKNQRPPISLSHCSGHQVL 64
           GSKD  EGSSS+SSPQ    G IPSRYESQKRRDWNTFCQYLKNQRPP+ LSHCS + VL
Sbjct: 6   GSKDFSEGSSSTSSPQ--PGGPIPSRYESQKRRDWNTFCQYLKNQRPPVPLSHCSCNHVL 65

Query: 65  EFLRYLDQFGKTKVHLQGCIFYGQLEPPAPCTCPLRQAWGSLDALIG--RAAYEENGGSQ 124
           EFLRYLDQFGKTKVH+QGC+FYGQ EPPAPCTCPLRQAWGSLDALIG  RAAYEE+GGS 
Sbjct: 66  EFLRYLDQFGKTKVHVQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEESGGSP 125

Query: 125 ETNPFASGAIRVYLREVRECQAKARGISYKKKKK-STTNQIKGAEESSSI 172
           ETNPFASGAIRVYLR+VRECQAKARGI YKKKKK +TTNQ KGAE+S+S+
Sbjct: 126 ETNPFASGAIRVYLRDVRECQAKARGIPYKKKKKTTTTNQSKGAEDSTSM 173

[Close]

BLAST of Sed0021365 vs. NCBI nr
Match: XP_023530720.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 280.8 bits (717), Expect = 7.9e-72
Identity = 141/171 (82.46%), Postives = 154/171 (90.06%), Query Frame = 0


Query: 5   GSKDLCEGSSSSSSPQLLASGTIPSRYESQKRRDWNTFCQYLKNQRPPISLSHCSGHQVL 64
           G+KD  EGSSS+SSPQ    G+IPSRYESQKRRDWNTFCQYLKNQRPP+ LSHCS + VL
Sbjct: 6   GTKDFSEGSSSTSSPQ--PGGSIPSRYESQKRRDWNTFCQYLKNQRPPVPLSHCSCNHVL 65

Query: 65  EFLRYLDQFGKTKVHLQGCIFYGQLEPPAPCTCPLRQAWGSLDALIG--RAAYEENGGSQ 124
           EFLRYLDQFGKTKVH+QGC+FYGQ EPPAPCTCPLRQAWGSLDALIG  RAAYEE+GGS 
Sbjct: 66  EFLRYLDQFGKTKVHVQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEESGGSP 125

Query: 125 ETNPFASGAIRVYLREVRECQAKARGISYKKKKK--STTNQIKGAEESSSI 172
           ETNPFASGAIRVYLR+VRECQAKARGI YKKKKK  +TTNQ KGAE+S+S+
Sbjct: 126 ETNPFASGAIRVYLRDVRECQAKARGIPYKKKKKKTTTTNQSKGAEDSTSM 174

[Close]

BLAST of Sed0021365 vs. NCBI nr
Match: KAG7022931.1 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 279.6 bits (714), Expect = 1.8e-71
Identity = 140/169 (82.84%), Postives = 154/169 (91.12%), Query Frame = 0


Query: 6   SKDLCEGSSSSSSPQLLASGTIPSRYESQKRRDWNTFCQYLKNQRPPISLSHCSGHQVLE 65
           +KD  EGSSS+SSPQ +  G+IPSRYESQKRRDWNTFCQYLKNQRPP+ LSHCS + VLE
Sbjct: 7   TKDFSEGSSSTSSPQPV--GSIPSRYESQKRRDWNTFCQYLKNQRPPVPLSHCSCNHVLE 66

Query: 66  FLRYLDQFGKTKVHLQGCIFYGQLEPPAPCTCPLRQAWGSLDALIG--RAAYEENGGSQE 125
           FLRYLDQFGKTKVH+QGC+FYGQ EPPAPCTCPLRQAWGSLDALIG  RAAYEE+GGS E
Sbjct: 67  FLRYLDQFGKTKVHVQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEESGGSPE 126

Query: 126 TNPFASGAIRVYLREVRECQAKARGISYKKKKK-STTNQIKGAEESSSI 172
           TNPFASGAIRVYLR+VRECQAKARGI YKKKKK +TTNQ KGAE+S+S+
Sbjct: 127 TNPFASGAIRVYLRDVRECQAKARGIPYKKKKKTTTTNQSKGAEDSTSM 173

[Close]

BLAST of Sed0021365 vs. NCBI nr
Match: KAG6589232.1 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 279.3 bits (713), Expect = 2.3e-71
Identity = 140/170 (82.35%), Postives = 154/170 (90.59%), Query Frame = 0


Query: 6   SKDLCEGSSSSSSPQLLASGTIPSRYESQKRRDWNTFCQYLKNQRPPISLSHCSGHQVLE 65
           +KD  EGSSS+SSPQ +  G+IPSRYESQKRRDWNTFCQYLKNQRPP+ LSHCS + VLE
Sbjct: 7   TKDFSEGSSSTSSPQPV--GSIPSRYESQKRRDWNTFCQYLKNQRPPVPLSHCSCNHVLE 66

Query: 66  FLRYLDQFGKTKVHLQGCIFYGQLEPPAPCTCPLRQAWGSLDALIG--RAAYEENGGSQE 125
           FLRYLDQFGKTKVH+QGC+FYGQ EPPAPCTCPLRQAWGSLDALIG  RAAYEE+GGS E
Sbjct: 67  FLRYLDQFGKTKVHVQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEESGGSPE 126

Query: 126 TNPFASGAIRVYLREVRECQAKARGISYKKKKK--STTNQIKGAEESSSI 172
           TNPFASGAIRVYLR+VRECQAKARGI YKKKKK  +TTNQ KGAE+S+S+
Sbjct: 127 TNPFASGAIRVYLRDVRECQAKARGIPYKKKKKKTTTTNQSKGAEDSTSM 174

[Close]

BLAST of Sed0021365 vs. NCBI nr
Match: XP_022930813.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Cucurbita moschata])

HSP 1 Score: 278.9 bits (712), Expect = 3.0e-71
Identity = 140/170 (82.35%), Postives = 153/170 (90.00%), Query Frame = 0


Query: 6   SKDLCEGSSSSSSPQLLASGTIPSRYESQKRRDWNTFCQYLKNQRPPISLSHCSGHQVLE 65
           +KD  EGSSS+SSPQ    G+IPSRYESQKRRDWNTFCQYLKNQRPP+ LSHCS + VLE
Sbjct: 7   TKDFSEGSSSTSSPQ--PGGSIPSRYESQKRRDWNTFCQYLKNQRPPVPLSHCSCNHVLE 66

Query: 66  FLRYLDQFGKTKVHLQGCIFYGQLEPPAPCTCPLRQAWGSLDALIG--RAAYEENGGSQE 125
           FLRYLDQFGKTKVH+QGC+FYGQ EPPAPCTCPLRQAWGSLDALIG  RAAYEE+GGS E
Sbjct: 67  FLRYLDQFGKTKVHVQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEESGGSPE 126

Query: 126 TNPFASGAIRVYLREVRECQAKARGISYKKKKK--STTNQIKGAEESSSI 172
           TNPFASGAIRVYLR+VRECQAKARGI YKKKKK  +TTNQ KGAE+S+S+
Sbjct: 127 TNPFASGAIRVYLRDVRECQAKARGIPYKKKKKKTTTTNQSKGAEDSTSM 174

[Close]

BLAST of Sed0021365 vs. ExPASy Swiss-Prot
Match: Q9S7R3 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 OS=Arabidopsis thaliana OX=3702 GN=LSH10 PE=1 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 6.9e-63
Identity = 126/171 (73.68%), Postives = 137/171 (80.12%), Query Frame = 0


Query: 3   KKGSKDLCEGSSSSSSPQLLASGTIPSRYESQKRRDWNTFCQYLKNQRPPISLSHCSGHQ 62
           ++  K L E  SS S P +      PSRYESQKRRDWNTF QYLKNQRPP+ +SHCS + 
Sbjct: 5   RERGKSLME--SSGSEPPV-----TPSRYESQKRRDWNTFGQYLKNQRPPVPMSHCSCNH 64

Query: 63  VLEFLRYLDQFGKTKVHLQGCIFYGQLEPPAPCTCPLRQAWGSLDALIG--RAAYEENGG 122
           VL+FLRYLDQFGKTKVH+ GC+FYGQ EPPAPCTCPLRQAWGSLDALIG  RAAYEENGG
Sbjct: 65  VLDFLRYLDQFGKTKVHVPGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEENGG 124

Query: 123 SQETNPFASGAIRVYLREVRECQAKARGISY-KKKKKSTTNQIKGAEESSS 171
             ETNPFASGAIRVYLREVRECQAKARGI Y KKKKK  T ++ G  E SS
Sbjct: 125 PPETNPFASGAIRVYLREVRECQAKARGIPYKKKKKKKPTPEMGGGREDSS 168

[Close]

BLAST of Sed0021365 vs. ExPASy Swiss-Prot
Match: A2XVI8 (Protein G1-like4 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_16643 PE=3 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 4.1e-55
Identity = 108/163 (66.26%), Postives = 128/163 (78.53%), Query Frame = 0


Query: 12  GSSSSSSPQLLASGT--IPSRYESQKRRDWNTFCQYLKNQRPPISLSHCSGHQVLEFLRY 71
           GSSSS+S   + +G    PSRYE+QKRRDWNTF QYL+N RPP+SL+ CSG  VLEFLRY
Sbjct: 21  GSSSSNSSPSMGAGAPQSPSRYEAQKRRDWNTFGQYLRNHRPPLSLAQCSGAHVLEFLRY 80

Query: 72  LDQFGKTKVHLQGCIFYGQLEPPAPCTCPLRQAWGSLDALIG--RAAYEENGGSQETNPF 131
           LDQFGKTKVH   C F+G   PPAPC CPLRQAWGSLDAL+G  RAA+EENGG  E+NPF
Sbjct: 81  LDQFGKTKVHTAACPFFGHPSPPAPCPCPLRQAWGSLDALVGRLRAAFEENGGRPESNPF 140

Query: 132 ASGAIRVYLREVRECQAKARGISY--KKKKKSTTNQIKGAEES 169
           A+ A+R+YLREVRE QA+ARG+SY  KK+KK    Q++G + S
Sbjct: 141 AARAVRLYLREVREHQARARGVSYEKKKRKKPQQQQLQGGDSS 183

[Close]

BLAST of Sed0021365 vs. ExPASy Swiss-Prot
Match: Q7XRS1 (Protein G1-like4 OS=Oryza sativa subsp. japonica OX=39947 GN=G1L4 PE=1 SV=2)

HSP 1 Score: 215.7 bits (548), Expect = 4.1e-55
Identity = 108/163 (66.26%), Postives = 128/163 (78.53%), Query Frame = 0


Query: 12  GSSSSSSPQLLASGT--IPSRYESQKRRDWNTFCQYLKNQRPPISLSHCSGHQVLEFLRY 71
           GSSSS+S   + +G    PSRYE+QKRRDWNTF QYL+N RPP+SL+ CSG  VLEFLRY
Sbjct: 21  GSSSSNSSPSMGAGAPQSPSRYEAQKRRDWNTFGQYLRNHRPPLSLAQCSGAHVLEFLRY 80

Query: 72  LDQFGKTKVHLQGCIFYGQLEPPAPCTCPLRQAWGSLDALIG--RAAYEENGGSQETNPF 131
           LDQFGKTKVH   C F+G   PPAPC CPLRQAWGSLDAL+G  RAA+EENGG  E+NPF
Sbjct: 81  LDQFGKTKVHTAACPFFGHPSPPAPCPCPLRQAWGSLDALVGRLRAAFEENGGRPESNPF 140

Query: 132 ASGAIRVYLREVRECQAKARGISY--KKKKKSTTNQIKGAEES 169
           A+ A+R+YLREVRE QA+ARG+SY  KK+KK    Q++G + S
Sbjct: 141 AARAVRLYLREVREHQARARGVSYEKKKRKKPQQQQLQGGDSS 183

[Close]

BLAST of Sed0021365 vs. ExPASy Swiss-Prot
Match: Q6ATW6 (Protein G1-like8 OS=Oryza sativa subsp. japonica OX=39947 GN=G1L8 PE=1 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 1.6e-54
Identity = 99/135 (73.33%), Postives = 114/135 (84.44%), Query Frame = 0


Query: 29  SRYESQKRRDWNTFCQYLKNQRPPISLSHCSGHQVLEFLRYLDQFGKTKVHLQGCIFYGQ 88
           SRYESQKRRDWNTF QYLKN RPP++L+ CSG  V+EFL+YLDQFGKTKVH  GC +YGQ
Sbjct: 29  SRYESQKRRDWNTFLQYLKNHRPPLTLARCSGAHVIEFLKYLDQFGKTKVHASGCAYYGQ 88

Query: 89  LEPPAPCTCPLRQAWGSLDALIG--RAAYEENGGSQETNPFASGAIRVYLREVRECQAKA 148
             PPAPC CPLRQAWGSLDALIG  RAAYEE+G + E+NPFA+ A+R+YLREVR+ QAKA
Sbjct: 89  PSPPAPCPCPLRQAWGSLDALIGRLRAAYEESGHAPESNPFAARAVRIYLREVRDAQAKA 148

Query: 149 RGISYKKKKKSTTNQ 162
           RGI Y+KKK+  T Q
Sbjct: 149 RGIPYEKKKRKRTQQ 163

[Close]

BLAST of Sed0021365 vs. ExPASy Swiss-Prot
Match: Q9LW68 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4 OS=Arabidopsis thaliana OX=3702 GN=LSH4 PE=1 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 1.6e-54
Identity = 108/147 (73.47%), Postives = 120/147 (81.63%), Query Frame = 0


Query: 13  SSSSSSPQLLASGTIP-SRYESQKRRDWNTFCQYLKNQRPPISLSHCSGHQVLEFLRYLD 72
           +SSSSS     SGT   SRYE+QKRRDWNTF QYL+N RPP+SLS CSG  VLEFLRYLD
Sbjct: 30  TSSSSSSSSGGSGTNQLSRYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLRYLD 89

Query: 73  QFGKTKVHLQGCIFYGQLEPPAPCTCPLRQAWGSLDALIG--RAAYEENGGSQETNPFAS 132
           QFGKTKVH   C F+G   PPAPC CPLRQAWGSLDALIG  RAA+EENGGS ETNPF +
Sbjct: 90  QFGKTKVHTHLCPFFGHPNPPAPCACPLRQAWGSLDALIGRLRAAFEENGGSPETNPFGA 149

Query: 133 GAIRVYLREVRECQAKARGISYKKKKK 157
            A+R+YLREVR+ QAKARGISY+KKK+
Sbjct: 150 RAVRLYLREVRDSQAKARGISYEKKKR 176

[Close]

BLAST of Sed0021365 vs. ExPASy TrEMBL
Match: A0A6J1JNV9 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like OS=Cucurbita maxima OX=3661 GN=LOC111486170 PE=3 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 2.2e-72
Identity = 142/170 (83.53%), Postives = 153/170 (90.00%), Query Frame = 0


Query: 5   GSKDLCEGSSSSSSPQLLASGTIPSRYESQKRRDWNTFCQYLKNQRPPISLSHCSGHQVL 64
           GSKD  EGSSS+SSPQ    G IPSRYESQKRRDWNTFCQYLKNQRPP+ LSHCS + VL
Sbjct: 6   GSKDFSEGSSSTSSPQ--PGGPIPSRYESQKRRDWNTFCQYLKNQRPPVPLSHCSCNHVL 65

Query: 65  EFLRYLDQFGKTKVHLQGCIFYGQLEPPAPCTCPLRQAWGSLDALIG--RAAYEENGGSQ 124
           EFLRYLDQFGKTKVH+QGC+FYGQ EPPAPCTCPLRQAWGSLDALIG  RAAYEE+GGS 
Sbjct: 66  EFLRYLDQFGKTKVHVQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEESGGSP 125

Query: 125 ETNPFASGAIRVYLREVRECQAKARGISYKKKKK-STTNQIKGAEESSSI 172
           ETNPFASGAIRVYLR+VRECQAKARGI YKKKKK +TTNQ KGAE+S+S+
Sbjct: 126 ETNPFASGAIRVYLRDVRECQAKARGIPYKKKKKTTTTNQSKGAEDSTSM 173

[Close]

BLAST of Sed0021365 vs. ExPASy TrEMBL
Match: A0A6J1EWG4 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like OS=Cucurbita moschata OX=3662 GN=LOC111437182 PE=3 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 1.4e-71
Identity = 140/170 (82.35%), Postives = 153/170 (90.00%), Query Frame = 0


Query: 6   SKDLCEGSSSSSSPQLLASGTIPSRYESQKRRDWNTFCQYLKNQRPPISLSHCSGHQVLE 65
           +KD  EGSSS+SSPQ    G+IPSRYESQKRRDWNTFCQYLKNQRPP+ LSHCS + VLE
Sbjct: 7   TKDFSEGSSSTSSPQ--PGGSIPSRYESQKRRDWNTFCQYLKNQRPPVPLSHCSCNHVLE 66

Query: 66  FLRYLDQFGKTKVHLQGCIFYGQLEPPAPCTCPLRQAWGSLDALIG--RAAYEENGGSQE 125
           FLRYLDQFGKTKVH+QGC+FYGQ EPPAPCTCPLRQAWGSLDALIG  RAAYEE+GGS E
Sbjct: 67  FLRYLDQFGKTKVHVQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEESGGSPE 126

Query: 126 TNPFASGAIRVYLREVRECQAKARGISYKKKKK--STTNQIKGAEESSSI 172
           TNPFASGAIRVYLR+VRECQAKARGI YKKKKK  +TTNQ KGAE+S+S+
Sbjct: 127 TNPFASGAIRVYLRDVRECQAKARGIPYKKKKKKTTTTNQSKGAEDSTSM 174

[Close]

BLAST of Sed0021365 vs. ExPASy TrEMBL
Match: A0A0A0K2D1 (ALOG domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G048120 PE=3 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 1.8e-69
Identity = 135/163 (82.82%), Postives = 143/163 (87.73%), Query Frame = 0


Query: 6   SKDLCEGSSSSSSPQLLASGTIPSRYESQKRRDWNTFCQYLKNQRPPISLSHCSGHQVLE 65
           SKD  EGSSSSS        T PSRYESQKRRDWNTFCQYLKNQRPP+ LSHC+ +QVLE
Sbjct: 9   SKDFSEGSSSSSGGGSTHGSTTPSRYESQKRRDWNTFCQYLKNQRPPVPLSHCNCNQVLE 68

Query: 66  FLRYLDQFGKTKVHLQGCIFYGQLEPPAPCTCPLRQAWGSLDALIG--RAAYEENGGSQE 125
           FLRYLDQFGKTKVH+QGC+FYGQ EPPAPCTCPLRQAWGSLDALIG  RAAYEENGGSQE
Sbjct: 69  FLRYLDQFGKTKVHIQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEENGGSQE 128

Query: 126 TNPFASGAIRVYLREVRECQAKARGISYKKKKKSTT-NQIKGA 166
           TNPFASGAIRVYLR+VRECQAKARGI YKKKKK TT +Q KG+
Sbjct: 129 TNPFASGAIRVYLRDVRECQAKARGIPYKKKKKKTTISQTKGS 171

[Close]

BLAST of Sed0021365 vs. ExPASy TrEMBL
Match: A0A1S3C1B9 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 OS=Cucumis melo OX=3656 GN=LOC103495500 PE=3 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 3.0e-69
Identity = 139/173 (80.35%), Postives = 147/173 (84.97%), Query Frame = 0


Query: 6   SKDLCEGSSSSSSPQLLASGTIPSRYESQKRRDWNTFCQYLKNQRPPISLSHCSGHQVLE 65
           SKD  EGSSSSS        T PSRYESQKRRDWNTFCQYLKNQRPP+ LSHC+ +QVLE
Sbjct: 8   SKDFSEGSSSSSGGGSTHGSTTPSRYESQKRRDWNTFCQYLKNQRPPVPLSHCNCNQVLE 67

Query: 66  FLRYLDQFGKTKVHLQGCIFYGQLEPPAPCTCPLRQAWGSLDALIG--RAAYEENGGSQE 125
           FLRYLDQFGKTKVH+QGC+FYGQ EPPAPCTCPLRQAWGSLDALIG  RAAYEENGGSQE
Sbjct: 68  FLRYLDQFGKTKVHIQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEENGGSQE 127

Query: 126 TNPFASGAIRVYLREVRECQAKARGISYKKKKK--STTNQIKGA----EESSS 171
           TNPFASGAIRVYLR+VRECQAKARGI YKKKKK  ST NQ KG     ++SSS
Sbjct: 128 TNPFASGAIRVYLRDVRECQAKARGIPYKKKKKKTSTINQTKGGGHDDQDSSS 180

[Close]

BLAST of Sed0021365 vs. ExPASy TrEMBL
Match: A0A5D3C6X1 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003300 PE=3 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 3.9e-69
Identity = 139/174 (79.89%), Postives = 147/174 (84.48%), Query Frame = 0


Query: 6   SKDLCEGSSSSSSPQLLASGTIPSRYESQKRRDWNTFCQYLKNQRPPISLSHCSGHQVLE 65
           SKD  EGSSSSS        T PSRYESQKRRDWNTFCQYLKNQRPP+ LSHC+ +QVLE
Sbjct: 8   SKDFSEGSSSSSGGGSTHGSTTPSRYESQKRRDWNTFCQYLKNQRPPVPLSHCNCNQVLE 67

Query: 66  FLRYLDQFGKTKVHLQGCIFYGQLEPPAPCTCPLRQAWGSLDALIG--RAAYEENGGSQE 125
           FLRYLDQFGKTKVH+QGC+FYGQ EPPAPCTCPLRQAWGSLDALIG  RAAYEENGGSQE
Sbjct: 68  FLRYLDQFGKTKVHIQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEENGGSQE 127

Query: 126 TNPFASGAIRVYLREVRECQAKARGISYKKKKK---STTNQIKGA----EESSS 171
           TNPFASGAIRVYLR+VRECQAKARGI YKKKKK   ST NQ KG     ++SSS
Sbjct: 128 TNPFASGAIRVYLRDVRECQAKARGIPYKKKKKKTSSTINQTKGGGHDDQDSSS 181

[Close]

BLAST of Sed0021365 vs. TAIR 10
Match: AT2G42610.1 (Protein of unknown function (DUF640) )

HSP 1 Score: 241.5 bits (615), Expect = 4.9e-64
Identity = 126/171 (73.68%), Postives = 137/171 (80.12%), Query Frame = 0


Query: 3   KKGSKDLCEGSSSSSSPQLLASGTIPSRYESQKRRDWNTFCQYLKNQRPPISLSHCSGHQ 62
           ++  K L E  SS S P +      PSRYESQKRRDWNTF QYLKNQRPP+ +SHCS + 
Sbjct: 5   RERGKSLME--SSGSEPPV-----TPSRYESQKRRDWNTFGQYLKNQRPPVPMSHCSCNH 64

Query: 63  VLEFLRYLDQFGKTKVHLQGCIFYGQLEPPAPCTCPLRQAWGSLDALIG--RAAYEENGG 122
           VL+FLRYLDQFGKTKVH+ GC+FYGQ EPPAPCTCPLRQAWGSLDALIG  RAAYEENGG
Sbjct: 65  VLDFLRYLDQFGKTKVHVPGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEENGG 124

Query: 123 SQETNPFASGAIRVYLREVRECQAKARGISY-KKKKKSTTNQIKGAEESSS 171
             ETNPFASGAIRVYLREVRECQAKARGI Y KKKKK  T ++ G  E SS
Sbjct: 125 PPETNPFASGAIRVYLREVRECQAKARGIPYKKKKKKKPTPEMGGGREDSS 168

[Close]

BLAST of Sed0021365 vs. TAIR 10
Match: AT2G42610.2 (Protein of unknown function (DUF640) )

HSP 1 Score: 241.5 bits (615), Expect = 4.9e-64
Identity = 126/171 (73.68%), Postives = 137/171 (80.12%), Query Frame = 0


Query: 3   KKGSKDLCEGSSSSSSPQLLASGTIPSRYESQKRRDWNTFCQYLKNQRPPISLSHCSGHQ 62
           ++  K L E  SS S P +      PSRYESQKRRDWNTF QYLKNQRPP+ +SHCS + 
Sbjct: 5   RERGKSLME--SSGSEPPV-----TPSRYESQKRRDWNTFGQYLKNQRPPVPMSHCSCNH 64

Query: 63  VLEFLRYLDQFGKTKVHLQGCIFYGQLEPPAPCTCPLRQAWGSLDALIG--RAAYEENGG 122
           VL+FLRYLDQFGKTKVH+ GC+FYGQ EPPAPCTCPLRQAWGSLDALIG  RAAYEENGG
Sbjct: 65  VLDFLRYLDQFGKTKVHVPGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEENGG 124

Query: 123 SQETNPFASGAIRVYLREVRECQAKARGISY-KKKKKSTTNQIKGAEESSS 171
             ETNPFASGAIRVYLREVRECQAKARGI Y KKKKK  T ++ G  E SS
Sbjct: 125 PPETNPFASGAIRVYLREVRECQAKARGIPYKKKKKKKPTPEMGGGREDSS 168

[Close]

BLAST of Sed0021365 vs. TAIR 10
Match: AT3G23290.2 (Protein of unknown function (DUF640) )

HSP 1 Score: 213.8 bits (543), Expect = 1.1e-55
Identity = 108/147 (73.47%), Postives = 120/147 (81.63%), Query Frame = 0


Query: 13  SSSSSSPQLLASGTIP-SRYESQKRRDWNTFCQYLKNQRPPISLSHCSGHQVLEFLRYLD 72
           +SSSSS     SGT   SRYE+QKRRDWNTF QYL+N RPP+SLS CSG  VLEFLRYLD
Sbjct: 30  TSSSSSSSSGGSGTNQLSRYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLRYLD 89

Query: 73  QFGKTKVHLQGCIFYGQLEPPAPCTCPLRQAWGSLDALIG--RAAYEENGGSQETNPFAS 132
           QFGKTKVH   C F+G   PPAPC CPLRQAWGSLDALIG  RAA+EENGGS ETNPF +
Sbjct: 90  QFGKTKVHTHLCPFFGHPNPPAPCACPLRQAWGSLDALIGRLRAAFEENGGSPETNPFGA 149

Query: 133 GAIRVYLREVRECQAKARGISYKKKKK 157
            A+R+YLREVR+ QAKARGISY+KKK+
Sbjct: 150 RAVRLYLREVRDSQAKARGISYEKKKR 176

[Close]

BLAST of Sed0021365 vs. TAIR 10
Match: AT3G04510.1 (Protein of unknown function (DUF640) )

HSP 1 Score: 213.4 bits (542), Expect = 1.4e-55
Identity = 100/151 (66.23%), Postives = 121/151 (80.13%), Query Frame = 0


Query: 13  SSSSSSPQLLASGTIPSRYESQKRRDWNTFCQYLKNQRPPISLSHCSGHQVLEFLRYLDQ 72
           S S+ +P   +S    SRYE+QKRRDWNTFCQYL+N  PP+SL+ CSG  VL+FLRYLDQ
Sbjct: 16  SLSTQTPSSFSSPPSSSRYENQKRRDWNTFCQYLRNHHPPLSLASCSGAHVLDFLRYLDQ 75

Query: 73  FGKTKVHLQGCIFYGQLEPPAPCTCPLRQAWGSLDALIG--RAAYEENGGSQETNPFASG 132
           FGKTKVH Q C F+G   PPAPC CPLRQAWGSLDALIG  RAAYEENGG+ ET+PF S 
Sbjct: 76  FGKTKVHHQNCAFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGAPETSPFGSR 135

Query: 133 AIRVYLREVRECQAKARGISYKKKKKSTTNQ 162
           ++R++LREVR+ QAK+RG+SY+KK+K   N+
Sbjct: 136 SVRIFLREVRDFQAKSRGVSYEKKRKRVNNK 166

[Close]

BLAST of Sed0021365 vs. TAIR 10
Match: AT5G28490.1 (Protein of unknown function (DUF640) )

HSP 1 Score: 212.6 bits (540), Expect = 2.5e-55
Identity = 104/148 (70.27%), Postives = 117/148 (79.05%), Query Frame = 0


Query: 16  SSSPQLLASGTIPSRYESQKRRDWNTFCQYLKNQRPPISLSHCSGHQVLEFLRYLDQFGK 75
           +SS QL    +  SRYE+QKRRDWNTFCQYL+N RPP+SL  CSG  VLEFLRYLDQFGK
Sbjct: 13  NSSTQLTPPSS--SRYENQKRRDWNTFCQYLRNHRPPLSLPSCSGAHVLEFLRYLDQFGK 72

Query: 76  TKVHLQGCIFYGQLEPPAPCTCPLRQAWGSLDALIG--RAAYEENGGSQETNPFASGAIR 135
           TKVH Q C F+G   PPAPC CPLRQAWGSLDALIG  RAAYEENGG  E NPF S A+R
Sbjct: 73  TKVHHQNCAFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGPPEANPFGSRAVR 132

Query: 136 VYLREVRECQAKARGISYKKKKKSTTNQ 162
           ++LREVR+ QAKARG+SY+KK+K    Q
Sbjct: 133 LFLREVRDFQAKARGVSYEKKRKRVNRQ 158

The following BLAST results are available for this feature:

BLAST of Sed0021365 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022988968.1	4.6e-72	83.53	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Cucurbita maxima]	[more]
XP_023530720.1	7.9e-72	82.46	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Cucurbita pepo subsp. pepo]	[more]
KAG7022931.1	1.8e-71	82.84	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10, partial [Cucurbita argyrosperma sub...	[more]
KAG6589232.1	2.3e-71	82.35	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10, partial [Cucurbita argyrosperma sub...	[more]
XP_022930813.1	3.0e-71	82.35	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Cucurbita moschata]	[more]

BLAST of Sed0021365 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9S7R3	6.9e-63	73.68	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 OS=Arabidopsis thaliana OX=3702 GN=L...	[more]
A2XVI8	4.1e-55	66.26	Protein G1-like4 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_16643 PE=3 SV=1	[more]
Q7XRS1	4.1e-55	66.26	Protein G1-like4 OS=Oryza sativa subsp. japonica OX=39947 GN=G1L4 PE=1 SV=2	[more]
Q6ATW6	1.6e-54	73.33	Protein G1-like8 OS=Oryza sativa subsp. japonica OX=39947 GN=G1L8 PE=1 SV=1	[more]
Q9LW68	1.6e-54	73.47	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4 OS=Arabidopsis thaliana OX=3702 GN=LS...	[more]

BLAST of Sed0021365 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JNV9	2.2e-72	83.53	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A6J1EWG4	1.4e-71	82.35	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like OS=Cucurbita moschata OX=3662 G...	[more]
A0A0A0K2D1	1.8e-69	82.82	ALOG domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G048120 PE=3 S...	[more]
A0A1S3C1B9	3.0e-69	80.35	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 OS=Cucumis melo OX=3656 GN=LOC103495...	[more]
A0A5D3C6X1	3.9e-69	79.89	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 OS=Cucumis melo var. makuwa OX=11946...	[more]

BLAST of Sed0021365 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G42610.1	4.9e-64	73.68	Protein of unknown function (DUF640)	[more]
AT2G42610.2	4.9e-64	73.68	Protein of unknown function (DUF640)	[more]
AT3G23290.2	1.1e-55	73.47	Protein of unknown function (DUF640)	[more]
AT3G04510.1	1.4e-55	66.23	Protein of unknown function (DUF640)	[more]
AT5G28490.1	2.5e-55	70.27	Protein of unknown function (DUF640)	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006936	ALOG domain	PFAM	PF04852	DUF640	coord: 27..141 e-value: 5.1E-60 score: 201.2
IPR006936	ALOG domain	PROSITE	PS51697	ALOG	coord: 30..155 score: 71.218735
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 152..171
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 9..27
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	PANTHER	PTHR31165:SF10	PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 10	coord: 1..170
IPR040222	ALOG family	PANTHER	PTHR31165	PROTEIN G1-LIKE2	coord: 1..170

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0021365.1	Sed0021365.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009299	mRNA transcription
biological_process	GO:0009416	response to light stimulus
cellular_component	GO:0005634	nucleus