Sed0021337 (gene) Chayote v1

Overview


Name	Sed0021337
Type	gene
Organism	Sechium edule (Chayote v1)
Description	60S ribosomal protein L32, putative
Location	LG08: 38986017 .. 38988362 (+)
RNA-Seq Expression	Sed0021337
Synteny	Sed0021337

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTAATTGGAACAGGCATTCTCTATATAAACCATTTAGACCCTTAAAGCTTATCGTCGAAGCTTGGACGGCCAAGGAAACCCTAATTTCTGTGAGTTGCTCTCTCTGAACTGCCGCTAGGGTTTATATTGATCATCTTCTCTTTGTACCACGTTTCTTTGCCTTGTATGATGAGATTTTGTTCTATTGCATAATTATTCCTCAATTGTTTTGGTTAATTTAGTTCATCTAGTGTGGGATCTGTGTTTTTGTCTCGTCATTTAGGGTTCGCTGTTAGTTTCGCAAGATTTGATGCATTTGAGCTTATGAATAATCGTCCATGGTATGGAATCTGTAGGTATAAGTGAAAATGGCTGTGCCTTTGCTGACGAAGAAGATCGTGAAGAAGAGGACCGCTAAGTTCAAGAGGCCTCAGCATGATCGAAGGATCTGCGTCAAGGTATTTTACTTCGCTATTAGTTTTTTCATTTTATGTACGTTTGTATGTTAGAGTAGGATGCGCAACAACGAAGGTGATGATATGTATTGTCGCCCCAGTCTTACTTGCATCAATAGATGTATGGTGGTGATTGACTGATTGTCTGATTCTTGTTGTTAATAGAACTTAGAACCCATTTACCATGATTTATTTCTCAAATTTCTGATTTCTGGGTTTTATGAATTTTATTTTCTCTTATCTGAGAATCTGTATTGTCGTTTAGTTGGATCTGATCAGTTATGACAATATTTTGTAATTAGATCTTAGTATTAATAATGTATGTTAATTAGTATTGCAAATTAGTTTTTTTTAATCTAATGCTATACAACATGGCGTGATGATGAAAACCCATCGATTCTGCATTTGAATGATGAATATTTTCATGCACTACCATCTGATCTAGTTGTATAATCCATTTTATTAGTTTATCCTCGTTTTGTTTCTTTTTTTTTCTTAAATAGATTCTTATTTCTGCAGTCAATGATGTTACCTACCCATATTAATGATTTCCTGTGATTAAATAATCAAATATCACCATCTTTCGACTGAGGTTGCAGTTATATGTACTTTTCCTTGGACATTTACTTTTTGTCTATTGCTATGAATCTGAAATTGCTCTTGGTATCTAATGTCTGGACTTCCATTTAATGGCTTGACATTTCGTTTTTTGGGGCATAGAACAATTTCATACAGGTCTTGCGACACGATTAGCTTTAAACTTGTAGCTTTCTGTTACTAAATCCCTGCATACAGATTTATTTCCTTAATCCATACTTCGATTGGGTTACAGTATAGATATTTTTATCAAGACGTTACATATCTTCTTTATCTAGAAGTTTCTATTTGCCCGTGGTATCTAATGTCCATACTTTTATTTAATAGTTGGACATTTCGTTGTTTAGGGCATATAACAATTTATACAGGTCTTGCGACACGGTTAGCTTAATATTTATAAGCTTTCTGTTACTAAATCCCTGTGTACAGCTATATTGTTTTATCATCAATTTCTACCCTCTTCCGCACTTCTGGTTTTCTCATCTTGCATTTATTCTACAGGAAAGCTGGAGAAGACCAAAGGGTATTGATTCCAGGGTTAGAAGGAAGTTCAAAGGATGCACTCTCATGCCGAATGTTGGTTACGGTACCGACAAGAAGACGCGCCACTACCTGCCCAATGGGTTCAAGAAGTTTGTTGTTCACAATGTCAAGGAGCTCGAACTCTTGATGATGCACAACAGGTTCGTTTTGATACTTAATATTAACCATCTTTAATTAAAGTTTTGTTTATTTTTGGCCTTTTGTCTGATCCATTACGATTCTTATTGCAGGACTTATTGTGCCGAAATTGCACACGATGTGTCTACAAAGAAGAGGAAGGAGATTGTTGAGAGGGCAGCTCAACTTGATGTGGTAGTTACCAACAAGCTTGCTAGGTTGCGCAGCCAAGAGGATGAATGAACAATTTAAATTTTTGAATGCTGTTTTCATCATGTTTTGTAGTGAGATTTCGGTAATATATACTTTTTTGATTCTAGAGATTCTGATATTTAATGTTGTTTGAATTTTATGACTCTTTACAATATATTTCGAATTTTTAATTTTGAAGTCTTTTTTCATGCTTTTCATCAAGGTTTCATATCTTAGCATGATTGGATATGCTGCTCTCTAATCACCGTTGCTGATGGCTCTTCAGCATTTTGCCATTGCTTGCATATCTGATCATTATATTTCATCCCTTTTTGAGATGAGATTGCAAGTTATAAGATTTTTTTTCTGAAAAACGTTATAAGATTTTATATATTTTTTGATATATGTCTTGATTATTTGTGTTGTATTTTCTTTTAATGTAGTTTAATATGTAAAGCAGCC

mRNA sequence

CCTAATTGGAACAGGCATTCTCTATATAAACCATTTAGACCCTTAAAGCTTATCGTCGAAGCTTGGACGGCCAAGGAAACCCTAATTTCTGTATAAGTGAAAATGGCTGTGCCTTTGCTGACGAAGAAGATCGTGAAGAAGAGGACCGCTAAGTTCAAGAGGCCTCAGCATGATCGAAGGATCTGCGTCAAGGAAAGCTGGAGAAGACCAAAGGGTATTGATTCCAGGGTTAGAAGGAAGTTCAAAGGATGCACTCTCATGCCGAATGTTGGTTACGGTACCGACAAGAAGACGCGCCACTACCTGCCCAATGGGTTCAAGAAGTTTGTTGTTCACAATGTCAAGGAGCTCGAACTCTTGATGATGCACAACAGGACTTATTGTGCCGAAATTGCACACGATGTGTCTACAAAGAAGAGGAAGGAGATTGTTGAGAGGGCAGCTCAACTTGATGTGGTAGTTACCAACAAGCTTGCTAGGTTGCGCAGCCAAGAGGATGAATGAACAATTTAAATTTTTGAATGCTGTTTTCATCATGTTTTGTAGTGAGATTTCGGTAATATATACTTTTTTGATTCTAGAGATTCTGATATTTAATGTTGTTTGAATTTTATGACTCTTTACAATATATTTCGAATTTTTAATTTTGAAGTCTTTTTTCATGCTTTTCATCAAGGTTTCATATCTTAGCATGATTGGATATGCTGCTCTCTAATCACCGTTGCTGATGGCTCTTCAGCATTTTGCCATTGCTTGCATATCTGATCATTATATTTCATCCCTTTTTGAGATGAGATTGCAAGTTATAAGATTTTTTTTCTGAAAAACGTTATAAGATTTTATATATTTTTTGATATATGTCTTGATTATTTGTGTTGTATTTTCTTTTAATGTAGTTTAATATGTAAAGCAGCC

Coding sequence (CDS)

ATGGCTGTGCCTTTGCTGACGAAGAAGATCGTGAAGAAGAGGACCGCTAAGTTCAAGAGGCCTCAGCATGATCGAAGGATCTGCGTCAAGGAAAGCTGGAGAAGACCAAAGGGTATTGATTCCAGGGTTAGAAGGAAGTTCAAAGGATGCACTCTCATGCCGAATGTTGGTTACGGTACCGACAAGAAGACGCGCCACTACCTGCCCAATGGGTTCAAGAAGTTTGTTGTTCACAATGTCAAGGAGCTCGAACTCTTGATGATGCACAACAGGACTTATTGTGCCGAAATTGCACACGATGTGTCTACAAAGAAGAGGAAGGAGATTGTTGAGAGGGCAGCTCAACTTGATGTGGTAGTTACCAACAAGCTTGCTAGGTTGCGCAGCCAAGAGGATGAATGA

Protein sequence

MAVPLLTKKIVKKRTAKFKRPQHDRRICVKESWRRPKGIDSRVRRKFKGCTLMPNVGYGTDKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVVTNKLARLRSQEDE

Homology

[Close]

BLAST of Sed0021337 vs. NCBI nr
Match: KAG6573344.1 (60S ribosomal protein L32-1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 254.6 bits (649), Expect = 4.7e-64
Identity = 126/133 (94.74%), Postives = 130/133 (97.74%), Query Frame = 0


Query: 1   MAVPLLTKKIVKKRTAKFKRPQHDRRICVKESWRRPKGIDSRVRRKFKGCTLMPNVGYGT 60
           MAVPLLTKKIVKKRT KFKRPQ DR+I VKESWRRPKGIDSRVRRKFKGCTLMPN+GYGT
Sbjct: 1   MAVPLLTKKIVKKRTTKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60

Query: 61  DKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKFVVHNVKELE+LMMHNRTYCAEIAHDVST+KRKEIVERAAQLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDVVV 120

Query: 121 TNKLARLRSQEDE 134
           TNKLARLRSQEDE
Sbjct: 121 TNKLARLRSQEDE 133

[Close]

BLAST of Sed0021337 vs. NCBI nr
Match: XP_022927470.1 (60S ribosomal protein L32-1 [Cucurbita moschata] >XP_022927471.1 60S ribosomal protein L32-1 [Cucurbita moschata] >XP_023001487.1 60S ribosomal protein L32-1 [Cucurbita maxima] >XP_023001488.1 60S ribosomal protein L32-1 [Cucurbita maxima] >KAG6583929.1 60S ribosomal protein L32-1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019543.1 60S ribosomal protein L32-1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 254.2 bits (648), Expect = 6.1e-64
Identity = 126/133 (94.74%), Postives = 130/133 (97.74%), Query Frame = 0


Query: 1   MAVPLLTKKIVKKRTAKFKRPQHDRRICVKESWRRPKGIDSRVRRKFKGCTLMPNVGYGT 60
           MAVPLL+KKIVKKRT KFKRPQ DR+I VKESWRRPKGIDSRVRRKFKGCTLMPN+GYGT
Sbjct: 1   MAVPLLSKKIVKKRTQKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60

Query: 61  DKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKFVVHNVKELE+LMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNVKELEILMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120

Query: 121 TNKLARLRSQEDE 134
           TNKLARLRSQEDE
Sbjct: 121 TNKLARLRSQEDE 133

[Close]

BLAST of Sed0021337 vs. NCBI nr
Match: XP_023542869.1 (60S ribosomal protein L32-1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 254.2 bits (648), Expect = 6.1e-64
Identity = 125/133 (93.98%), Postives = 130/133 (97.74%), Query Frame = 0


Query: 1   MAVPLLTKKIVKKRTAKFKRPQHDRRICVKESWRRPKGIDSRVRRKFKGCTLMPNVGYGT 60
           MAVPLLTKK+VKKRT KFKRPQ DR+I VKESWRRPKGIDSRVRRKFKGCTLMPN+GYGT
Sbjct: 1   MAVPLLTKKVVKKRTTKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60

Query: 61  DKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKFVVHNVKELE+LMMHNRTYCAEIAHDVST+KRKEIVERAAQLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDVVV 120

Query: 121 TNKLARLRSQEDE 134
           TNKLARLRSQEDE
Sbjct: 121 TNKLARLRSQEDE 133

[Close]

BLAST of Sed0021337 vs. NCBI nr
Match: XP_023519489.1 (60S ribosomal protein L32-1-like [Cucurbita pepo subsp. pepo] >XP_023519490.1 60S ribosomal protein L32-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 253.8 bits (647), Expect = 8.0e-64
Identity = 125/133 (93.98%), Postives = 130/133 (97.74%), Query Frame = 0


Query: 1   MAVPLLTKKIVKKRTAKFKRPQHDRRICVKESWRRPKGIDSRVRRKFKGCTLMPNVGYGT 60
           MAVPLL+KK+VKKRT KFKRPQ DR+I VKESWRRPKGIDSRVRRKFKGCTLMPN+GYGT
Sbjct: 1   MAVPLLSKKVVKKRTQKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60

Query: 61  DKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKFVVHNVKELE+LMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNVKELEILMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120

Query: 121 TNKLARLRSQEDE 134
           TNKLARLRSQEDE
Sbjct: 121 TNKLARLRSQEDE 133

[Close]

BLAST of Sed0021337 vs. NCBI nr
Match: XP_038894346.1 (60S ribosomal protein L32-1 [Benincasa hispida])

HSP 1 Score: 253.8 bits (647), Expect = 8.0e-64
Identity = 126/133 (94.74%), Postives = 130/133 (97.74%), Query Frame = 0


Query: 1   MAVPLLTKKIVKKRTAKFKRPQHDRRICVKESWRRPKGIDSRVRRKFKGCTLMPNVGYGT 60
           MAVPLL+KKIVKKRT KFKRPQ DR+I VKE+WRRPKGIDSRVRRKFKGCTLMPN+GYGT
Sbjct: 21  MAVPLLSKKIVKKRTKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGT 80

Query: 61  DKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV
Sbjct: 81  DKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 140

Query: 121 TNKLARLRSQEDE 134
           TNKLARLRSQEDE
Sbjct: 141 TNKLARLRSQEDE 153

[Close]

BLAST of Sed0021337 vs. ExPASy Swiss-Prot
Match: P49211 (60S ribosomal protein L32-1 OS=Arabidopsis thaliana OX=3702 GN=RPL32A PE=2 SV=2)

HSP 1 Score: 239.6 bits (610), Expect = 2.1e-62
Identity = 120/133 (90.23%), Postives = 126/133 (94.74%), Query Frame = 0


Query: 1   MAVPLLTKKIVKKRTAKFKRPQHDRRICVKESWRRPKGIDSRVRRKFKGCTLMPNVGYGT 60
           MAVPLLTKK+VKKR+AKF RPQ DRRI VKESWRRPKGIDSRVRRKFKG TLMPNVGYG+
Sbjct: 1   MAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGYGS 60

Query: 61  DKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKFVVHN  ELELLMMHNRTYCAEIAH+VSTKKRK IVERA+QLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNTSELELLMMHNRTYCAEIAHNVSTKKRKAIVERASQLDVVV 120

Query: 121 TNKLARLRSQEDE 134
           TN+LARLRSQEDE
Sbjct: 121 TNRLARLRSQEDE 133

[Close]

BLAST of Sed0021337 vs. ExPASy Swiss-Prot
Match: Q9FHG2 (60S ribosomal protein L32-2 OS=Arabidopsis thaliana OX=3702 GN=RPL32B PE=2 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 1.3e-61
Identity = 117/133 (87.97%), Postives = 125/133 (93.98%), Query Frame = 0


Query: 1   MAVPLLTKKIVKKRTAKFKRPQHDRRICVKESWRRPKGIDSRVRRKFKGCTLMPNVGYGT 60
           MAVPLLTKK+VKKR+AKF RPQ DRRI VKESWRRPKGIDSRVRRKFKG TLMPNVGYG+
Sbjct: 1   MAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGYGS 60

Query: 61  DKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKF+VHN  ELELLMMHNRTYCAEIAH++STKKRK IVERA+QLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFIVHNTSELELLMMHNRTYCAEIAHNISTKKRKAIVERASQLDVVV 120

Query: 121 TNKLARLRSQEDE 134
           +NKL RLRSQEDE
Sbjct: 121 SNKLGRLRSQEDE 133

[Close]

BLAST of Sed0021337 vs. ExPASy Swiss-Prot
Match: E2RKA8 (60S ribosomal protein L32 OS=Canis lupus familiaris OX=9615 GN=RPL32 PE=1 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 4.3e-44
Identity = 87/130 (66.92%), Postives = 111/130 (85.38%), Query Frame = 0


Query: 4   PLLTKKIVKKRTAKFKRPQHDRRICVKESWRRPKGIDSRVRRKFKGCTLMPNVGYGTDKK 63
           PL+  KIVKKRT KF R Q DR + +K +WR+P+GID+RVRR+FKG  LMPN+GYG++KK
Sbjct: 6   PLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGSNKK 65

Query: 64  TRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVVTNK 123
           T+H LP+GF+KF+VHNVKELE+L+M N++YCAEIAH+VS+K RK IVERAAQL + VTN 
Sbjct: 66  TKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNP 125

Query: 124 LARLRSQEDE 134
            ARLRS+E+E
Sbjct: 126 NARLRSEENE 135

[Close]

BLAST of Sed0021337 vs. ExPASy Swiss-Prot
Match: P62910 (60S ribosomal protein L32 OS=Homo sapiens OX=9606 GN=RPL32 PE=1 SV=2)

HSP 1 Score: 178.7 bits (452), Expect = 4.3e-44
Identity = 87/130 (66.92%), Postives = 111/130 (85.38%), Query Frame = 0


Query: 4   PLLTKKIVKKRTAKFKRPQHDRRICVKESWRRPKGIDSRVRRKFKGCTLMPNVGYGTDKK 63
           PL+  KIVKKRT KF R Q DR + +K +WR+P+GID+RVRR+FKG  LMPN+GYG++KK
Sbjct: 6   PLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGSNKK 65

Query: 64  TRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVVTNK 123
           T+H LP+GF+KF+VHNVKELE+L+M N++YCAEIAH+VS+K RK IVERAAQL + VTN 
Sbjct: 66  TKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNP 125

Query: 124 LARLRSQEDE 134
            ARLRS+E+E
Sbjct: 126 NARLRSEENE 135

[Close]

BLAST of Sed0021337 vs. ExPASy Swiss-Prot
Match: Q76KA3 (60S ribosomal protein L32 OS=Macaca fascicularis OX=9541 GN=RPL32 PE=2 SV=3)

HSP 1 Score: 178.7 bits (452), Expect = 4.3e-44
Identity = 87/130 (66.92%), Postives = 111/130 (85.38%), Query Frame = 0


Query: 4   PLLTKKIVKKRTAKFKRPQHDRRICVKESWRRPKGIDSRVRRKFKGCTLMPNVGYGTDKK 63
           PL+  KIVKKRT KF R Q DR + +K +WR+P+GID+RVRR+FKG  LMPN+GYG++KK
Sbjct: 6   PLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGSNKK 65

Query: 64  TRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVVTNK 123
           T+H LP+GF+KF+VHNVKELE+L+M N++YCAEIAH+VS+K RK IVERAAQL + VTN 
Sbjct: 66  TKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNP 125

Query: 124 LARLRSQEDE 134
            ARLRS+E+E
Sbjct: 126 NARLRSEENE 135

[Close]

BLAST of Sed0021337 vs. ExPASy TrEMBL
Match: A0A6J1KGP3 (60S ribosomal protein L32-1 OS=Cucurbita maxima OX=3661 GN=LOC111495610 PE=3 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 3.0e-64
Identity = 126/133 (94.74%), Postives = 130/133 (97.74%), Query Frame = 0


Query: 1   MAVPLLTKKIVKKRTAKFKRPQHDRRICVKESWRRPKGIDSRVRRKFKGCTLMPNVGYGT 60
           MAVPLL+KKIVKKRT KFKRPQ DR+I VKESWRRPKGIDSRVRRKFKGCTLMPN+GYGT
Sbjct: 1   MAVPLLSKKIVKKRTQKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60

Query: 61  DKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKFVVHNVKELE+LMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNVKELEILMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120

Query: 121 TNKLARLRSQEDE 134
           TNKLARLRSQEDE
Sbjct: 121 TNKLARLRSQEDE 133

[Close]

BLAST of Sed0021337 vs. ExPASy TrEMBL
Match: A0A6J1EP15 (60S ribosomal protein L32-1 OS=Cucurbita moschata OX=3662 GN=LOC111434287 PE=3 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 3.0e-64
Identity = 126/133 (94.74%), Postives = 130/133 (97.74%), Query Frame = 0


Query: 1   MAVPLLTKKIVKKRTAKFKRPQHDRRICVKESWRRPKGIDSRVRRKFKGCTLMPNVGYGT 60
           MAVPLL+KKIVKKRT KFKRPQ DR+I VKESWRRPKGIDSRVRRKFKGCTLMPN+GYGT
Sbjct: 1   MAVPLLSKKIVKKRTQKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60

Query: 61  DKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKFVVHNVKELE+LMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNVKELEILMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120

Query: 121 TNKLARLRSQEDE 134
           TNKLARLRSQEDE
Sbjct: 121 TNKLARLRSQEDE 133

[Close]

BLAST of Sed0021337 vs. ExPASy TrEMBL
Match: A0A6J1K6F1 (60S ribosomal protein L32-1-like OS=Cucurbita maxima OX=3661 GN=LOC111490500 PE=3 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 5.1e-64
Identity = 125/133 (93.98%), Postives = 130/133 (97.74%), Query Frame = 0


Query: 1   MAVPLLTKKIVKKRTAKFKRPQHDRRICVKESWRRPKGIDSRVRRKFKGCTLMPNVGYGT 60
           MAVPLLTKKIVKKRT KFKRPQ DR+I VKE+WRRPKGIDSRVRRKFKGCTLMPN+GYGT
Sbjct: 1   MAVPLLTKKIVKKRTTKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60

Query: 61  DKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKFVVHNVKELE+LMMHNRTYCAEIAHDVST+KRKEIVERAAQLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDVVV 120

Query: 121 TNKLARLRSQEDE 134
           TNKLARLRSQEDE
Sbjct: 121 TNKLARLRSQEDE 133

[Close]

BLAST of Sed0021337 vs. ExPASy TrEMBL
Match: A0A6J1GUI9 (60S ribosomal protein L32-1-like OS=Cucurbita moschata OX=3662 GN=LOC111457242 PE=3 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 5.1e-64
Identity = 125/133 (93.98%), Postives = 130/133 (97.74%), Query Frame = 0


Query: 1   MAVPLLTKKIVKKRTAKFKRPQHDRRICVKESWRRPKGIDSRVRRKFKGCTLMPNVGYGT 60
           MAVPLLTKKIVKKRT KFKRPQ DR+I VKE+WRRPKGIDSRVRRKFKGCTLMPN+GYGT
Sbjct: 1   MAVPLLTKKIVKKRTTKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60

Query: 61  DKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKFVVHNVKELE+LMMHNRTYCAEIAHDVST+KRKEIVERAAQLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDVVV 120

Query: 121 TNKLARLRSQEDE 134
           TNKLARLRSQEDE
Sbjct: 121 TNKLARLRSQEDE 133

[Close]

BLAST of Sed0021337 vs. ExPASy TrEMBL
Match: A0A6J1CF23 (60S ribosomal protein L32-1 OS=Momordica charantia OX=3673 GN=LOC111010921 PE=3 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 1.1e-63
Identity = 125/133 (93.98%), Postives = 129/133 (96.99%), Query Frame = 0


Query: 1   MAVPLLTKKIVKKRTAKFKRPQHDRRICVKESWRRPKGIDSRVRRKFKGCTLMPNVGYGT 60
           MAVPLLTKKIVKKR  KFKRPQ DR+I VKESWRRPKGIDSRVRRKFKGCTLMPN+GYGT
Sbjct: 1   MAVPLLTKKIVKKRAQKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60

Query: 61  DKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKFVVHNVKELE+LMMHNRTYCAEIAHDVST+KRKEIVERAAQLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDVVV 120

Query: 121 TNKLARLRSQEDE 134
           TNKLARLRSQEDE
Sbjct: 121 TNKLARLRSQEDE 133

[Close]

BLAST of Sed0021337 vs. TAIR 10
Match: AT4G18100.1 (Ribosomal protein L32e )

HSP 1 Score: 239.6 bits (610), Expect = 1.5e-63
Identity = 120/133 (90.23%), Postives = 126/133 (94.74%), Query Frame = 0


Query: 1   MAVPLLTKKIVKKRTAKFKRPQHDRRICVKESWRRPKGIDSRVRRKFKGCTLMPNVGYGT 60
           MAVPLLTKK+VKKR+AKF RPQ DRRI VKESWRRPKGIDSRVRRKFKG TLMPNVGYG+
Sbjct: 1   MAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGYGS 60

Query: 61  DKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKFVVHN  ELELLMMHNRTYCAEIAH+VSTKKRK IVERA+QLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNTSELELLMMHNRTYCAEIAHNVSTKKRKAIVERASQLDVVV 120

Query: 121 TNKLARLRSQEDE 134
           TN+LARLRSQEDE
Sbjct: 121 TNRLARLRSQEDE 133

[Close]

BLAST of Sed0021337 vs. TAIR 10
Match: AT5G46430.1 (Ribosomal protein L32e )

HSP 1 Score: 236.9 bits (603), Expect = 9.5e-63
Identity = 117/133 (87.97%), Postives = 125/133 (93.98%), Query Frame = 0


Query: 1   MAVPLLTKKIVKKRTAKFKRPQHDRRICVKESWRRPKGIDSRVRRKFKGCTLMPNVGYGT 60
           MAVPLLTKK+VKKR+AKF RPQ DRRI VKESWRRPKGIDSRVRRKFKG TLMPNVGYG+
Sbjct: 1   MAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGYGS 60

Query: 61  DKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKF+VHN  ELELLMMHNRTYCAEIAH++STKKRK IVERA+QLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFIVHNTSELELLMMHNRTYCAEIAHNISTKKRKAIVERASQLDVVV 120

Query: 121 TNKLARLRSQEDE 134
           +NKL RLRSQEDE
Sbjct: 121 SNKLGRLRSQEDE 133

[Close]

BLAST of Sed0021337 vs. TAIR 10
Match: AT5G46430.2 (Ribosomal protein L32e )

HSP 1 Score: 236.9 bits (603), Expect = 9.5e-63
Identity = 117/133 (87.97%), Postives = 125/133 (93.98%), Query Frame = 0


Query: 1   MAVPLLTKKIVKKRTAKFKRPQHDRRICVKESWRRPKGIDSRVRRKFKGCTLMPNVGYGT 60
           MAVPLLTKK+VKKR+AKF RPQ DRRI VKESWRRPKGIDSRVRRKFKG TLMPNVGYG+
Sbjct: 1   MAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGYGS 60

Query: 61  DKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKF+VHN  ELELLMMHNRTYCAEIAH++STKKRK IVERA+QLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFIVHNTSELELLMMHNRTYCAEIAHNISTKKRKAIVERASQLDVVV 120

Query: 121 TNKLARLRSQEDE 134
           +NKL RLRSQEDE
Sbjct: 121 SNKLGRLRSQEDE 133

The following BLAST results are available for this feature:

BLAST of Sed0021337 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6573344.1	4.7e-64	94.74	60S ribosomal protein L32-1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022927470.1	6.1e-64	94.74	60S ribosomal protein L32-1 [Cucurbita moschata] >XP_022927471.1 60S ribosomal p...	[more]
XP_023542869.1	6.1e-64	93.98	60S ribosomal protein L32-1 [Cucurbita pepo subsp. pepo]	[more]
XP_023519489.1	8.0e-64	93.98	60S ribosomal protein L32-1-like [Cucurbita pepo subsp. pepo] >XP_023519490.1 60...	[more]
XP_038894346.1	8.0e-64	94.74	60S ribosomal protein L32-1 [Benincasa hispida]	[more]

BLAST of Sed0021337 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P49211	2.1e-62	90.23	60S ribosomal protein L32-1 OS=Arabidopsis thaliana OX=3702 GN=RPL32A PE=2 SV=2	[more]
Q9FHG2	1.3e-61	87.97	60S ribosomal protein L32-2 OS=Arabidopsis thaliana OX=3702 GN=RPL32B PE=2 SV=1	[more]
E2RKA8	4.3e-44	66.92	60S ribosomal protein L32 OS=Canis lupus familiaris OX=9615 GN=RPL32 PE=1 SV=1	[more]
P62910	4.3e-44	66.92	60S ribosomal protein L32 OS=Homo sapiens OX=9606 GN=RPL32 PE=1 SV=2	[more]
Q76KA3	4.3e-44	66.92	60S ribosomal protein L32 OS=Macaca fascicularis OX=9541 GN=RPL32 PE=2 SV=3	[more]

BLAST of Sed0021337 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KGP3	3.0e-64	94.74	60S ribosomal protein L32-1 OS=Cucurbita maxima OX=3661 GN=LOC111495610 PE=3 SV=...	[more]
A0A6J1EP15	3.0e-64	94.74	60S ribosomal protein L32-1 OS=Cucurbita moschata OX=3662 GN=LOC111434287 PE=3 S...	[more]
A0A6J1K6F1	5.1e-64	93.98	60S ribosomal protein L32-1-like OS=Cucurbita maxima OX=3661 GN=LOC111490500 PE=...	[more]
A0A6J1GUI9	5.1e-64	93.98	60S ribosomal protein L32-1-like OS=Cucurbita moschata OX=3662 GN=LOC111457242 P...	[more]
A0A6J1CF23	1.1e-63	93.98	60S ribosomal protein L32-1 OS=Momordica charantia OX=3673 GN=LOC111010921 PE=3 ...	[more]

BLAST of Sed0021337 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G18100.1	1.5e-63	90.23	Ribosomal protein L32e	[more]
AT5G46430.1	9.5e-63	87.97	Ribosomal protein L32e	[more]
AT5G46430.2	9.5e-63	87.97	Ribosomal protein L32e	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001515	Ribosomal protein L32e	SMART	SM01393	Ribosomal_L32e_2	coord: 15..122 e-value: 3.8E-71 score: 252.4
IPR001515	Ribosomal protein L32e	PFAM	PF01655	Ribosomal_L32e	coord: 15..122 e-value: 1.3E-48 score: 163.8
IPR001515	Ribosomal protein L32e	PANTHER	PTHR23413	60S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT N	coord: 1..133
IPR001515	Ribosomal protein L32e	CDD	cd00513	Ribosomal_L32_L32e	coord: 17..122 e-value: 1.89534E-57 score: 171.944
None	No IPR available	PANTHER	PTHR23413:SF13	60S RIBOSOMAL PROTEIN L32-1-RELATED	coord: 1..133
IPR036351	Ribosomal protein L32e superfamily	SUPERFAMILY	52042	Ribosomal protein L32e	coord: 2..131

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0021337.1	Sed0021337.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome