Sed0021264 (gene) Chayote v1

Overview
NameSed0021264
Typegene
OrganismSechium edule (Chayote v1)
DescriptionRibosomal RNA small subunit methyltransferase A
LocationLG03: 8926888 .. 8930606 (-)
RNA-Seq ExpressionSed0021264
SyntenySed0021264
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTAATCCATTATTTAAAAGAGGTAGGCAACCACCGCAGCACTCCAAATCCGACCTGGCACAAGTTTTTATCAGATTCCTTTTCCTCTACTCCCACACCTACAGTTCCCAAACGCATAGTCTCTTCCGTGACGTAGATTCTTCGTAAAGAACTTTATTCTTCAAATCCAAACCGTCCACGTGTTGCACCCATATCAACTCTCAATCCTGCTGCTCGCAGACGATAAAGTCCCCGTCCCAGCCTTTCTCACCACGTAATTTAATTTATATTTCAAATTAGGAAATTGGATTGGTGTCAAATGATTACTGGAAAAGCATCGACCCATTCAACTGTATCACAAAAAAAAAAAAAAAAAAAAAAATTGCATCTCAAACTTCTTCAATTTTCGGCGATCAATTTCTTGAAATTTTCGTTGTTCAAATCCGAAATTCGTCTATTCATTTGCAGAAGAATCATAGCCATTAGAGCTTTTGCTTTGAGATTTTGTTCGTTAAGGTATAGCTGATCTTTATCTGTGTAGCTTTTGCTTTACACTATTGATTTCGTGTTTGTTTGTGTGTTTGGATCCTTTCTGCGCAAGATTCCTGGATTTCTTTTTGTTACTTTCGGCTACAATGTTTGAAAAGCAAGTTTTCGGAAAGTCAATTACTAGTGCGAGGAGGAGGTTGCTTCAGGAAGAGATTGAATTAAGTTCCTGTTTCTGTGTTTCGATTTTATGAGCTTTGATGATGATTTAGAGGTATTTTTTTTGAATTTTTGGTGCTTGATTGATTCTGAAACATCATGTTTTTCAAAAATAGGAACAATATTTTATTGTAGGTTCTCTGAATCTTGCCGACTTCTTGAGTAGAAGCAATCTCTCGAATTAGATGGGGAAATGATTGTTATTGGCCTTAATTGTGAGTTTTGAGAGAGATAAATTTAGTAAAACCGTGTTTCTTTTTTCTGTCACAGCTCGATTTTGTTCGAGATAGTTTCTCGGTAATGGTTATTGATTTTGTTATGATTTTGTCTATTTTTTTTTTCTCTGTTAAAGCTTTCACATATAATTCCAATTGGAGTTATATAAAATGAAATCATGTGCTGTTTTTTTTCACGTTTTTCTGTCTTGATTACTGCAATCTGGAAATTGGCTAAAATTCTTGAAGAACTTTGTGGATTTCCTGATTGGTAAGGCTTGAATCCAAGTCTAATATTGTTCGTTATATCTCCTGCTGGATCCTTTGTATACATTCGAAACTCTAGCATTTAGTTTATGCTACATTATGTTCGATTGAATTTGCTTGTTTGTTTCTATGTCAACATGTACAGTCTATGTTTGCAGCAATTTATCTTTTTGTTGTTTCGAAATGTAACGAATTGATCGATTTTTCTTTCTGATATGTTGCTCTTAACAGGGAAAAACTGCATCATTTCACATCTCAGGCCTTAGTATCTACTTGGGATTAGCTTATATTTCTTTGGAGGGACTTGGTATTGTTTAGTAAAGAGAATTGAACTCACCCATGTCTGTGGCATTTCCCCAACTCTCCTGGTGGTTGTGGAGCGGGAAGCATAAAGAACCTCGATCCTCGAATGGTTCTGCTTTAAACCCTTCATTAGATACAGCCATTCGGGAACCGGATACTCTAAAATTTCCTTTAGTCAATGGGGCCAACATATCCTCCTCGTCTAGAAGGGTGAAGAGGAAATGGCATAGTCGTGAACAAAGGAAAATTGATACGGAGTATGACATTGTTCTTGTTCCATCTGATGGAGGGTGCGTCTCAGGGTCCGAGTCGGATGACTCAGATTGGTCTATTGGATGGTCGGAACCACATGGTCCTGGGTTCCAGAGCGACGAGGACACCGACAACAGTTTCGCCGTGCTGGTACCATGTTATGGACGCATTTACGATGATTTTGTGGACGAAACTAAGAACAGTATCCTAACTGCTGTTGGGAACATCAATGATGGCTTTTCTGCTGGTAAGAGTTGGTTTTTATCAAGCTTGCATTTTGATTGGTATTGGATGTTAGTTATTGCATTTTGCCTTCCTGAATATTCTTCTAGTCTTCTTTCTTGAATAGTGAATATCCTATGATAGCTTAATTTCATTGTTTATATTAGATAAGATGAAATTTCATCGCGAAATCAGTTATCGTGAAAGAAATAATACTCTAATCTTATAAAGGCTATAGGACCTCTTCATCTTTCCAGCGTAGAATTCTCAACATACTCCCTTAAAATGGTGGTTCCTTAGGTTTACCATTCTAGAATCGAATCTCAATTTCATATTTTTGGACTAAATACCTGCTTGACCTTAATAAACTCAGATATCATATTAGATAACATGAGATTTCAGCCCACCTATCTTCCAAGATTATAAGACATCCTTACATTTCCAATCCTCAACAGCTTTGAGGACTTTATTGTAAATGCTGGACATCAGTTCAGTTAGCCGTATTAAAAAAAAACACAAAATCTTTATACAATCAAGTTGTTGTCTCATATCCATAGACTCATCTAATTTCAGGAAGATGGTGCTATTTCTGTTTCTGATTCATAGTAGGAAGGCATTTGAAACTTCATTTCTAGGAAATATTTCTCAACACATTCTCAATAGGTTGATTGATTCATTCTGGCTTAAACTTTATATTATATGATTGTTCTTCTGGCCAATGTGAATATTCATAGCTAGGTAAAAAAAAATTGGTCCTTTGAAGCTTTGTCCAGTTTGGTTCATGTAGTTTCGGATGTTGATTTAGTCTTTGTACTTTCAATACAGTGTAAAATTGGTCCTTATAATAAGTTTCTTATTAATTTTCCTTAAAAATTACTCTATAAATTTCAAAAATTCATTTACATTGTCTTCTTTCTGGTATTAAATTATTATTATTGAACCAAAATGTGGAATTTCCTTTTCGGGTGCTTTTTTGTTTGTTTTATGCTGATTTCATCTGCACTTTTTAATGGAGCAGAGAGCGATATCTATGTGGAACAATGGCTGTCTTCTCTTCAGAACTGATGCACAGTAGTTATAACCGTTGCACGCTGATGGTAATGCTCTGTTTCCAAGAAGAAATCATCCTGTGATATTTAGCCATTAATTTTTTTTATAAAAAAAATAGAAATTATAAAAAAGAAACTATCTATTCTGGCTTCTTGTAATTATAAAACTGAGAAGCAAATTGGAAGAAAAGATAAGATCCAATCAGTGGGTGGAATCTTTTCAATTATTTTGACCATGCTCTAAAGACCTCATCTGGAATGAAGCTTCTTAACATGGGCTGTAAATACTTTTGAGACTCCTTTGTAAATATGGAAGCTTGAGCCAACCAGCTGGGTTTGAAGAAAATGAATATTAAAAAAAAAAAAAGAGGTGAGAGTGAAGTGGCTTTTAGTTCTTTGAAGTTCAGTTAGTTATTGTATAGAGTGGGATGTGTTTAATTTATATGAAGGTTGTTGTAAATAGTGACTCATTTTTATGCATCATGTAAATATGATCTTAGTGGGTTTGGTTTGTAAATGGTGACCTCATTTGTAAAATTTGTTGTACATAGTAACACAGTTATGTAGGCATGTAAATATCTCTCCCCCTATTCAATGTAATATTCTTTATATTTGTATATTTAGCATTAAAGCCCTATTATTTACAAAGTTTGACTGAATTATTTCGTTTCTTGTATTAGTTGGCTTGTTTGTAATGAGAATATAATTTTCAGATTATCAGTGTAAA

mRNA sequence

CTTAATCCATTATTTAAAAGAGGTAGGCAACCACCGCAGCACTCCAAATCCGACCTGGCACAAGTTTTTATCAGATTCCTTTTCCTCTACTCCCACACCTACAGTTCCCAAACGCATAGTCTCTTCCGTGACGTAGATTCTTCGTAAAGAACTTTATTCTTCAAATCCAAACCGTCCACGTGTTGCACCCATATCAACTCTCAATCCTGCTGCTCGCAGACGATAAAGTCCCCGTCCCAGCCTTTCTCACCACGTAATTTAATTTATATTTCAAATTAGGAAATTGGATTGGTGTCAAATGATTACTGGAAAAGCATCGACCCATTCAACTGTATCACAAAAAAAAAAAAAAAAAAAAAAATTGCATCTCAAACTTCTTCAATTTTCGGCGATCAATTTCTTGAAATTTTCGTTGTTCAAATCCGAAATTCGTCTATTCATTTGCAGAAGAATCATAGCCATTAGAGCTTTTGCTTTGAGATTTTGTTCGTTAAGGTATAGCTGATCTTTATCTGTGTAGCTTTTGCTTTACACTATTGATTTCGTGTTTGTTTGTGTGTTTGGATCCTTTCTGCGCAAGATTCCTGGATTTCTTTTTGTTACTTTCGGCTACAATGTTTGAAAAGCAAGTTTTCGGAAAGTCAATTACTAGTGCGAGGAGGAGGTTGCTTCAGGAAGAGATTGAATTAAGTTCCTGTTTCTGTGTTTCGATTTTATGAGCTTTGATGATGATTTAGAGGTATTTTTTTTGAATTTTTGGTGCTTGATTGATTCTGAAACATCATGTTTTTCAAAAATAGGAACAATATTTTATTGTAGGTTCTCTGAATCTTGCCGACTTCTTGAGTAGAAGCAATCTCTCGAATTAGATGGGGAAATGATTGTTATTGGCCTTAATTGTGAGTTTTGAGAGAGATAAATTTAGTAAAACCGTGTTTCTTTTTTCTGTCACAGCTCGATTTTGTTCGAGATAGTTTCTCGGTAATGGTTATTGATTTTGTTATGATTTTGTCTATTTTTTTTTTCTCTGTTAAAGCTTTCACATATAATTCCAATTGGAGTTATATAAAATGAAATCATGTGCTGTTTTTTTTCACGTTTTTCTGTCTTGATTACTGCAATCTGGAAATTGGCTAAAATTCTTGAAGAACTTTGTGGATTTCCTGATTGGTAAGGCTTGAATCCAAGTCTAATATTGTTCGTTATATCTCCTGCTGGATCCTTTGTATACATTCGAAACTCTAGCATTTAGTTTATGCTACATTATGTTCGATTGAATTTGCTTGTTTGTTTCTATGTCAACATGTACAGTCTATGTTTGCAGCAATTTATCTTTTTGTTGTTTCGAAATGTAACGAATTGATCGATTTTTCTTTCTGATATGTTGCTCTTAACAGGGAAAAACTGCATCATTTCACATCTCAGGCCTTAGTATCTACTTGGGATTAGCTTATATTTCTTTGGAGGGACTTGGTATTGTTTAGTAAAGAGAATTGAACTCACCCATGTCTGTGGCATTTCCCCAACTCTCCTGGTGGTTGTGGAGCGGGAAGCATAAAGAACCTCGATCCTCGAATGGTTCTGCTTTAAACCCTTCATTAGATACAGCCATTCGGGAACCGGATACTCTAAAATTTCCTTTAGTCAATGGGGCCAACATATCCTCCTCGTCTAGAAGGGTGAAGAGGAAATGGCATAGTCGTGAACAAAGGAAAATTGATACGGAGTATGACATTGTTCTTGTTCCATCTGATGGAGGGTGCGTCTCAGGGTCCGAGTCGGATGACTCAGATTGGTCTATTGGATGGTCGGAACCACATGGTCCTGGGTTCCAGAGCGACGAGGACACCGACAACAGTTTCGCCGTGCTGGTACCATGTTATGGACGCATTTACGATGATTTTGTGGACGAAACTAAGAACAGTATCCTAACTGCTGTTGGGAACATCAATGATGGCTTTTCTGCTGAGAGCGATATCTATGTGGAACAATGGCTGTCTTCTCTTCAGAACTGATGCACAGTAGTTATAACCGTTGCACGCTGATGGTAATGCTCTGTTTCCAAGAAGAAATCATCCTGTGATATTTAGCCATTAATTTTTTTTATAAAAAAAATAGAAATTATAAAAAAGAAACTATCTATTCTGGCTTCTTGTAATTATAAAACTGAGAAGCAAATTGGAAGAAAAGATAAGATCCAATCAGTGGGTGGAATCTTTTCAATTATTTTGACCATGCTCTAAAGACCTCATCTGGAATGAAGCTTCTTAACATGGGCTGTAAATACTTTTGAGACTCCTTTGTAAATATGGAAGCTTGAGCCAACCAGCTGGGTTTGAAGAAAATGAATATTAAAAAAAAAAAAAGAGGTGAGAGTGAAGTGGCTTTTAGTTCTTTGAAGTTCAGTTAGTTATTGTATAGAGTGGGATGTGTTTAATTTATATGAAGGTTGTTGTAAATAGTGACTCATTTTTATGCATCATGTAAATATGATCTTAGTGGGTTTGGTTTGTAAATGGTGACCTCATTTGTAAAATTTGTTGTACATAGTAACACAGTTATGTAGGCATGTAAATATCTCTCCCCCTATTCAATGTAATATTCTTTATATTTGTATATTTAGCATTAAAGCCCTATTATTTACAAAGTTTGACTGAATTATTTCGTTTCTTGTATTAGTTGGCTTGTTTGTAATGAGAATATAATTTTCAGATTATCAGTGTAAA

Coding sequence (CDS)

ATGTCTGTGGCATTTCCCCAACTCTCCTGGTGGTTGTGGAGCGGGAAGCATAAAGAACCTCGATCCTCGAATGGTTCTGCTTTAAACCCTTCATTAGATACAGCCATTCGGGAACCGGATACTCTAAAATTTCCTTTAGTCAATGGGGCCAACATATCCTCCTCGTCTAGAAGGGTGAAGAGGAAATGGCATAGTCGTGAACAAAGGAAAATTGATACGGAGTATGACATTGTTCTTGTTCCATCTGATGGAGGGTGCGTCTCAGGGTCCGAGTCGGATGACTCAGATTGGTCTATTGGATGGTCGGAACCACATGGTCCTGGGTTCCAGAGCGACGAGGACACCGACAACAGTTTCGCCGTGCTGGTACCATGTTATGGACGCATTTACGATGATTTTGTGGACGAAACTAAGAACAGTATCCTAACTGCTGTTGGGAACATCAATGATGGCTTTTCTGCTGAGAGCGATATCTATGTGGAACAATGGCTGTCTTCTCTTCAGAACTGA

Protein sequence

MSVAFPQLSWWLWSGKHKEPRSSNGSALNPSLDTAIREPDTLKFPLVNGANISSSSRRVKRKWHSREQRKIDTEYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDEDTDNSFAVLVPCYGRIYDDFVDETKNSILTAVGNINDGFSAESDIYVEQWLSSLQN
Homology
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BLAST of Sed0021264 vs. NCBI nr
Match: XP_038886443.1 (uncharacterized protein LOC120076637 [Benincasa hispida] >XP_038886444.1 uncharacterized protein LOC120076637 [Benincasa hispida] >XP_038886445.1 uncharacterized protein LOC120076637 [Benincasa hispida] >XP_038886446.1 uncharacterized protein LOC120076637 [Benincasa hispida])

HSP 1 Score: 320.5 bits (820), Expect = 8.9e-84
Identity = 155/170 (91.18%), Postives = 162/170 (95.29%), Query Frame = 0 

Query: 1   MSVAFPQLSWWLWSGKHKEPRSSN-GSALNPSLDTAIREPDTLKFPLVNGANISSSSRRV 60
           MSVAFPQLSWWLWSGKHKEPRSSN GSALN SLDTA RE DTLKFPLVNGANISSSSRRV
Sbjct: 1   MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRV 60

Query: 61  KRKWHSREQRKIDTEYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDEDTDNSF 120
           KRKWHSRE+RKID EYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSD+++DNSF
Sbjct: 61  KRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDESDNSF 120

Query: 121 AVLVPCYGRIYDDFVDETKNSILTAVGNINDGFSAESDIYVEQWLSSLQN 170
           AVLVPCYGRIY+DFVDETKNSIL+AVGNIND FSAES  Y+EQWLSSLQN
Sbjct: 121 AVLVPCYGRIYNDFVDETKNSILSAVGNINDSFSAESKKYMEQWLSSLQN 170

[Close]
BLAST of Sed0021264 vs. NCBI nr
Match: XP_004152600.1 (uncharacterized protein LOC101213956 [Cucumis sativus] >XP_031736756.1 uncharacterized protein LOC101213956 [Cucumis sativus] >XP_031736757.1 uncharacterized protein LOC101213956 [Cucumis sativus] >XP_031736758.1 uncharacterized protein LOC101213956 [Cucumis sativus] >KGN62990.2 hypothetical protein Csa_022594 [Cucumis sativus])

HSP 1 Score: 319.7 bits (818), Expect = 1.5e-83
Identity = 154/170 (90.59%), Postives = 162/170 (95.29%), Query Frame = 0 

Query: 1   MSVAFPQLSWWLWSGKHKEPRSSN-GSALNPSLDTAIREPDTLKFPLVNGANISSSSRRV 60
           MSVAFPQLSWWLWSGKHKEPRSSN GSALN SLDTA RE DTLKFPLVNGAN+SSSSRRV
Sbjct: 1   MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANLSSSSRRV 60

Query: 61  KRKWHSREQRKIDTEYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDEDTDNSF 120
           KRKWHSRE+RKID EYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSD+++DNSF
Sbjct: 61  KRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDESDNSF 120

Query: 121 AVLVPCYGRIYDDFVDETKNSILTAVGNINDGFSAESDIYVEQWLSSLQN 170
           AVLVPCYGRIY+DFVDETKNSIL+AVGNIND FSAES  Y+EQWLSSLQN
Sbjct: 121 AVLVPCYGRIYNDFVDETKNSILSAVGNINDSFSAESKKYMEQWLSSLQN 170

[Close]
BLAST of Sed0021264 vs. NCBI nr
Match: XP_008444920.1 (PREDICTED: uncharacterized protein LOC103488121 [Cucumis melo] >XP_008444921.1 PREDICTED: uncharacterized protein LOC103488121 [Cucumis melo] >XP_016900065.1 PREDICTED: uncharacterized protein LOC103488121 [Cucumis melo])

HSP 1 Score: 319.7 bits (818), Expect = 1.5e-83
Identity = 153/170 (90.00%), Postives = 162/170 (95.29%), Query Frame = 0 

Query: 1   MSVAFPQLSWWLWSGKHKEPRSSN-GSALNPSLDTAIREPDTLKFPLVNGANISSSSRRV 60
           MSVAFPQLSWWLWSGKHKEPRSSN GSALN SLDTA RE DTLKFPLVNGANISSSSRRV
Sbjct: 1   MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRV 60

Query: 61  KRKWHSREQRKIDTEYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDEDTDNSF 120
           KRKWHSRE+RK+D EYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSD+++DNSF
Sbjct: 61  KRKWHSREERKVDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDESDNSF 120

Query: 121 AVLVPCYGRIYDDFVDETKNSILTAVGNINDGFSAESDIYVEQWLSSLQN 170
           AVLVPCYGRIY+DFVDETKNSIL+A+GNIND FSAES  Y+EQWLSSLQN
Sbjct: 121 AVLVPCYGRIYNDFVDETKNSILSAIGNINDSFSAESKKYMEQWLSSLQN 170

[Close]
BLAST of Sed0021264 vs. NCBI nr
Match: XP_023001877.1 (uncharacterized protein LOC111495931 [Cucurbita maxima] >XP_023001878.1 uncharacterized protein LOC111495931 [Cucurbita maxima] >XP_023001879.1 uncharacterized protein LOC111495931 [Cucurbita maxima] >XP_023001880.1 uncharacterized protein LOC111495931 [Cucurbita maxima] >XP_023536720.1 uncharacterized protein LOC111798013 [Cucurbita pepo subsp. pepo] >XP_023536721.1 uncharacterized protein LOC111798013 [Cucurbita pepo subsp. pepo] >XP_023536722.1 uncharacterized protein LOC111798013 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 319.3 bits (817), Expect = 2.0e-83
Identity = 149/169 (88.17%), Postives = 159/169 (94.08%), Query Frame = 0 

Query: 1   MSVAFPQLSWWLWSGKHKEPRSSNGSALNPSLDTAIREPDTLKFPLVNGANISSSSRRVK 60
           MSVAFPQLSWW WSGKHKEPR+SNGSA N SLDT IREPDTLKFPL NGANISSSSRRV+
Sbjct: 1   MSVAFPQLSWWSWSGKHKEPRTSNGSAFNASLDTVIREPDTLKFPLANGANISSSSRRVR 60

Query: 61  RKWHSREQRKIDTEYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDEDTDNSFA 120
           RKWHSRE+RKID EYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSD++TDNSFA
Sbjct: 61  RKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDETDNSFA 120

Query: 121 VLVPCYGRIYDDFVDETKNSILTAVGNINDGFSAESDIYVEQWLSSLQN 170
           VLVPCYGR+Y+DFVDETKNSIL+A GNIND FSAES  Y+EQWLSSLQ+
Sbjct: 121 VLVPCYGRVYNDFVDETKNSILSAAGNINDSFSAESKKYMEQWLSSLQS 169

[Close]
BLAST of Sed0021264 vs. NCBI nr
Match: XP_022132233.1 (uncharacterized protein LOC111005141 isoform X2 [Momordica charantia])

HSP 1 Score: 318.9 bits (816), Expect = 2.6e-83
Identity = 151/169 (89.35%), Postives = 161/169 (95.27%), Query Frame = 0 

Query: 1   MSVAFPQLSWWLWSGKHKEPRSSNGSALNPSLDTAIREPDTLKFPLVNGANISSSSRRVK 60
           M+VAFPQLSWWLWSGK+KEPRSSNGS LN SLDTAIREPDTLKFPLVNGANISSSSRRVK
Sbjct: 1   MAVAFPQLSWWLWSGKNKEPRSSNGSPLNASLDTAIREPDTLKFPLVNGANISSSSRRVK 60

Query: 61  RKWHSREQRKIDTEYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDEDTDNSFA 120
           RKWHSRE+RKID EYDIVLVPSDGGCVSGSESDDSDWSIGWSEP+GPGFQSD+D DNSFA
Sbjct: 61  RKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPNGPGFQSDDDPDNSFA 120

Query: 121 VLVPCYGRIYDDFVDETKNSILTAVGNINDGFSAESDIYVEQWLSSLQN 170
           VLVPCYG +Y+DFVDETKNSIL+AVGNIND FSA+S  Y+EQWLSSLQN
Sbjct: 121 VLVPCYGHMYNDFVDETKNSILSAVGNINDSFSADSKKYMEQWLSSLQN 169

[Close]
BLAST of Sed0021264 vs. ExPASy TrEMBL
Match: A0A1S3BB05 (uncharacterized protein LOC103488121 OS=Cucumis melo OX=3656 GN=LOC103488121 PE=4 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 7.3e-84
Identity = 153/170 (90.00%), Postives = 162/170 (95.29%), Query Frame = 0 

Query: 1   MSVAFPQLSWWLWSGKHKEPRSSN-GSALNPSLDTAIREPDTLKFPLVNGANISSSSRRV 60
           MSVAFPQLSWWLWSGKHKEPRSSN GSALN SLDTA RE DTLKFPLVNGANISSSSRRV
Sbjct: 1   MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRV 60

Query: 61  KRKWHSREQRKIDTEYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDEDTDNSF 120
           KRKWHSRE+RK+D EYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSD+++DNSF
Sbjct: 61  KRKWHSREERKVDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDESDNSF 120

Query: 121 AVLVPCYGRIYDDFVDETKNSILTAVGNINDGFSAESDIYVEQWLSSLQN 170
           AVLVPCYGRIY+DFVDETKNSIL+A+GNIND FSAES  Y+EQWLSSLQN
Sbjct: 121 AVLVPCYGRIYNDFVDETKNSILSAIGNINDSFSAESKKYMEQWLSSLQN 170

[Close]
BLAST of Sed0021264 vs. ExPASy TrEMBL
Match: A0A6J1KME1 (uncharacterized protein LOC111495931 OS=Cucurbita maxima OX=3661 GN=LOC111495931 PE=4 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 9.6e-84
Identity = 149/169 (88.17%), Postives = 159/169 (94.08%), Query Frame = 0 

Query: 1   MSVAFPQLSWWLWSGKHKEPRSSNGSALNPSLDTAIREPDTLKFPLVNGANISSSSRRVK 60
           MSVAFPQLSWW WSGKHKEPR+SNGSA N SLDT IREPDTLKFPL NGANISSSSRRV+
Sbjct: 1   MSVAFPQLSWWSWSGKHKEPRTSNGSAFNASLDTVIREPDTLKFPLANGANISSSSRRVR 60

Query: 61  RKWHSREQRKIDTEYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDEDTDNSFA 120
           RKWHSRE+RKID EYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSD++TDNSFA
Sbjct: 61  RKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDETDNSFA 120

Query: 121 VLVPCYGRIYDDFVDETKNSILTAVGNINDGFSAESDIYVEQWLSSLQN 170
           VLVPCYGR+Y+DFVDETKNSIL+A GNIND FSAES  Y+EQWLSSLQ+
Sbjct: 121 VLVPCYGRVYNDFVDETKNSILSAAGNINDSFSAESKKYMEQWLSSLQS 169

[Close]
BLAST of Sed0021264 vs. ExPASy TrEMBL
Match: A0A6J1BVP6 (uncharacterized protein LOC111005141 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111005141 PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.2e-83
Identity = 151/169 (89.35%), Postives = 161/169 (95.27%), Query Frame = 0 

Query: 1   MSVAFPQLSWWLWSGKHKEPRSSNGSALNPSLDTAIREPDTLKFPLVNGANISSSSRRVK 60
           M+VAFPQLSWWLWSGK+KEPRSSNGS LN SLDTAIREPDTLKFPLVNGANISSSSRRVK
Sbjct: 1   MAVAFPQLSWWLWSGKNKEPRSSNGSPLNASLDTAIREPDTLKFPLVNGANISSSSRRVK 60

Query: 61  RKWHSREQRKIDTEYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDEDTDNSFA 120
           RKWHSRE+RKID EYDIVLVPSDGGCVSGSESDDSDWSIGWSEP+GPGFQSD+D DNSFA
Sbjct: 61  RKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPNGPGFQSDDDPDNSFA 120

Query: 121 VLVPCYGRIYDDFVDETKNSILTAVGNINDGFSAESDIYVEQWLSSLQN 170
           VLVPCYG +Y+DFVDETKNSIL+AVGNIND FSA+S  Y+EQWLSSLQN
Sbjct: 121 VLVPCYGHMYNDFVDETKNSILSAVGNINDSFSADSKKYMEQWLSSLQN 169

[Close]
BLAST of Sed0021264 vs. ExPASy TrEMBL
Match: A0A6J1GID2 (uncharacterized protein LOC111454487 OS=Cucurbita moschata OX=3662 GN=LOC111454487 PE=4 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 1.6e-83
Identity = 149/169 (88.17%), Postives = 159/169 (94.08%), Query Frame = 0 

Query: 1   MSVAFPQLSWWLWSGKHKEPRSSNGSALNPSLDTAIREPDTLKFPLVNGANISSSSRRVK 60
           MSVAFPQLSWW WSGKHKEPR+SNGSA N SLDT IREPDTLKFPL NGANISSSSRRV+
Sbjct: 1   MSVAFPQLSWWSWSGKHKEPRTSNGSAFNASLDTVIREPDTLKFPLANGANISSSSRRVR 60

Query: 61  RKWHSREQRKIDTEYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDEDTDNSFA 120
           RKWHSRE+RKID EYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSD++TDNSFA
Sbjct: 61  RKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDETDNSFA 120

Query: 121 VLVPCYGRIYDDFVDETKNSILTAVGNINDGFSAESDIYVEQWLSSLQN 170
           VLVPCYGR+Y+DFVDETKNSIL+A GNIND FSAES  Y+EQWLSSLQ+
Sbjct: 121 VLVPCYGRVYNDFVDETKNSILSASGNINDSFSAESKKYMEQWLSSLQS 169

[Close]
BLAST of Sed0021264 vs. ExPASy TrEMBL
Match: A0A6J1K730 (uncharacterized protein LOC111492231 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111492231 PE=4 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 2.7e-78
Identity = 147/170 (86.47%), Postives = 157/170 (92.35%), Query Frame = 0 

Query: 1   MSVAFPQLSWWLWSGKHKEPRSSN-GSALNPSLDTAIREPDTLKFPLVNGANISSSSRRV 60
           MSVAFPQLSWWL SGKHKEP+SSN GSALN SLDTA RE DTLKF LVNGANISSSSRRV
Sbjct: 1   MSVAFPQLSWWLRSGKHKEPQSSNGGSALNASLDTANRETDTLKFSLVNGANISSSSRRV 60

Query: 61  KRKWHSREQRKIDTEYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDEDTDNSF 120
           KRKWHSRE+RKID EYDIVLVPSDGGC+SGSESDDSDWSIGWSEPHGPGFQSD+D+DNSF
Sbjct: 61  KRKWHSREERKIDREYDIVLVPSDGGCMSGSESDDSDWSIGWSEPHGPGFQSDDDSDNSF 120

Query: 121 AVLVPCYGRIYDDFVDETKNSILTAVGNINDGFSAESDIYVEQWLSSLQN 170
           AVLVPCY RIY+DFVDETK S+L+AVGNI+D FS ES  Y+EQWLSSLQN
Sbjct: 121 AVLVPCYARIYNDFVDETKISVLSAVGNISDSFSTESKKYMEQWLSSLQN 170

[Close]
BLAST of Sed0021264 vs. TAIR 10
Match: AT5G65480.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G38060.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 84.3 bits (207), Expect = 1.0e-16
Identity = 56/169 (33.14%), Postives = 83/169 (49.11%), Query Frame = 0 

Query: 1   MSVAFPQLSWWLWSGKHKEPRSSNGSAL--NPSLDTAIREPDTLKFPLVNGANISSSSRR 60
           M+V+FP+L  WL  G + + R    S    + SL  ++++  T K       + SSS ++
Sbjct: 1   MAVSFPRLPRWLCGGSNTKDREKKESIPKGSSSLSPSLKKTTTSK-----TGSSSSSVKK 60

Query: 61  VKRKWHSREQRKIDTEYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDEDTDNS 120
            KR W  R       E D +      G V   E DD +WSIGW EPHGPGF++++D    
Sbjct: 61  TKRGWIGRGGSGSGGEEDKI------GNVVFPEPDDPEWSIGWVEPHGPGFKAEDDDCGG 120

Query: 121 FAVLVPCYGRIYDDFVDETKNSILTAVGNINDGFSAESDIYVEQWLSSL 168
           F VLVP Y ++ D   ++  N   +         +A     +EQWLSS+
Sbjct: 121 FVVLVPLYKKVMDGSGNQIPNGFFSP--------AAPDGKNMEQWLSSM 150

[Close]
BLAST of Sed0021264 vs. TAIR 10
Match: AT4G38060.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 81.3 bits (199), Expect = 8.4e-16
Identity = 43/88 (48.86%), Postives = 54/88 (61.36%), Query Frame = 0 

Query: 88  SGSES------DDSDWSIGWSEPHGPGFQS-DEDTDNSFAVLVPCYGRIYDDFVDETKNS 147
           SGSES      D  +WS+GW+EPHGP FQS DE  D  F VLVPCY  + +       N 
Sbjct: 48  SGSESVDVVAGDGPEWSVGWTEPHGPDFQSDDEGNDGGFLVLVPCYRAVVEG-SSNNNNQ 107

Query: 148 ILTAVGNINDGFSAESDIYVEQWLSSLQ 169
           +L+AV N+ +G   +   Y+EQWLSSLQ
Sbjct: 108 LLSAVKNLPNGLPPDGKNYMEQWLSSLQ 134

[Close]
BLAST of Sed0021264 vs. TAIR 10
Match: AT4G38060.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65480.1); Has 63 Blast hits to 63 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 63.2 bits (152), Expect = 2.4e-10
Identity = 34/71 (47.89%), Postives = 43/71 (60.56%), Query Frame = 0 

Query: 88  SGSES------DDSDWSIGWSEPHGPGFQS-DEDTDNSFAVLVPCYGRIYDDFVDETKNS 147
           SGSES      D  +WS+GW+EPHGP FQS DE  D  F VLVPCY  + +       N 
Sbjct: 48  SGSESVDVVAGDGPEWSVGWTEPHGPDFQSDDEGNDGGFLVLVPCYRAVVEG-SSNNNNQ 107

Query: 148 ILTAVGNINDG 152
           +L+AV N+ +G
Sbjct: 108 LLSAVKNLPNG 117

The following BLAST results are available for this feature:
BLAST of Sed0021264 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038886443.18.9e-8491.18uncharacterized protein LOC120076637 [Benincasa hispida] >XP_038886444.1 unchara... [more]
XP_004152600.11.5e-8390.59uncharacterized protein LOC101213956 [Cucumis sativus] >XP_031736756.1 uncharact... [more]
XP_008444920.11.5e-8390.00PREDICTED: uncharacterized protein LOC103488121 [Cucumis melo] >XP_008444921.1 P... [more]
XP_023001877.12.0e-8388.17uncharacterized protein LOC111495931 [Cucurbita maxima] >XP_023001878.1 uncharac... [more]
XP_022132233.12.6e-8389.35uncharacterized protein LOC111005141 isoform X2 [Momordica charantia][more]
BLAST of Sed0021264 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Sed0021264 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3BB057.3e-8490.00uncharacterized protein LOC103488121 OS=Cucumis melo OX=3656 GN=LOC103488121 PE=... [more]
A0A6J1KME19.6e-8488.17uncharacterized protein LOC111495931 OS=Cucurbita maxima OX=3661 GN=LOC111495931... [more]
A0A6J1BVP61.2e-8389.35uncharacterized protein LOC111005141 isoform X2 OS=Momordica charantia OX=3673 G... [more]
A0A6J1GID21.6e-8388.17uncharacterized protein LOC111454487 OS=Cucurbita moschata OX=3662 GN=LOC1114544... [more]
A0A6J1K7302.7e-7886.47uncharacterized protein LOC111492231 isoform X2 OS=Cucurbita maxima OX=3661 GN=L... [more]
BLAST of Sed0021264 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G65480.11.0e-1633.14unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT4G38060.28.4e-1648.86unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT4G38060.12.4e-1047.89unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34464OS09G0376300 PROTEINcoord: 1..169
NoneNo IPR availablePANTHERPTHR34464:SF5SUBFAMILY NOT NAMEDcoord: 1..169

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0021264.1Sed0021264.1mRNA
Sed0021264.2Sed0021264.2mRNA
Sed0021264.3Sed0021264.3mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0032259 methylation
molecular_function GO:0008168 methyltransferase activity