Sed0021253 (gene) Chayote v1

Overview


Name	Sed0021253
Type	gene
Organism	Sechium edule (Chayote v1)
Description	protein MODIFYING WALL LIGNIN-1-like
Location	LG05: 36309012 .. 36312022 (+)
RNA-Seq Expression	Sed0021253
Synteny	Sed0021253

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGGAAGAGCCTTTTTCTCCGATCACCAGGCCGCCATGGAAAAACCTCGGCCGAGCTTCGCGATAAGCTGTTCCGTCGTCGCCATCCTGACTCTGACCTCCTTCGCTTCATGTATGGCTGCTGAATTCAACAGAAAAAAAGTAAGTTTCTCTTAATTTCCTTCTCATATCAAAGAATTGATTCTTCCTACAAAAAATTCGTGAATCTGACGCAGAAAAAGGACCTGAAATTGAACGGGAGATTGTGTATGTTACCTGAAAGTGAAGCGTTCAAATCGGGAGTTGTGGGTTTGGTGTGCTTGGCGGTGGCGCAGATCTTCGGGAGCGCTGTAATCTGCCATGGCTGTTGGGGAAAGGAGAAATCAAAGAGTTGCAGCGCCATAACGCCCCTGCTTTTCATCTCTTGGTCGGTAATTGCTTCGACGTTTCTTACATTTTTTTACCCTAAATTTCAACGTTTAATTTTGATTTATCTTTTAAAGTAGCATATATGTAGCAAAAATATTAAGAGATTATAGAGATAGTTGTCATTAGGCATATATTAATATTATTGAGTTATTACTTTGACTCGTATAAAATACATAAACTCAATCAATTTAATCAAGTCAAATCGATAAATTTTAATAAAATAAAATGGATAGATTTCAATAGAATAATTTTGTTTATTTAAAATCTTAATAAAATAAAATTTAAAGAGCAATACTTATCTTTCCCTAAAATCACGTATTTTTATTTTATTTTGTATTTTTCTCTCATCTTTAATTTTTTTTTTTCATCAATCAAAACCAATTAAAAAAATAAGGTAAAAATATGTAGTTATAAGGTGGATAAATATTTCCTTACCCTAAGTATTGCTAAAATTTAAATCTATAAATTTTAATTAAGTTACATATTTATATTTTATTATGTATGAAATATTTTTAAAAATAGTCATAATTAAAATAAGAATGTGTGAATTTATTAAGAGACTTCTTTTATGGGATCTATTAAAAGATAGGAGCTGTTTGTTTAATAGCTTTTGGGTTAAGGAGTTATATTAAGTAGTTAAAAATTGAGAATTGTGTCAAAAACTCGTTTGGATGTAGTTTTTGTGTAGATGAGTTAGAGTCAAAACTTTGTTTGGATGTAGAATTAAAAATGAGTAGTTCTTTTTAGTAGTTAAAAAAGAAATTATTAAAAATGAATAGTTAAAACTGAGTTATTTTGATTGATTTAAAATGAATGATTAAAACTAAGTTGATAGAAATGGTTGAGTAGTTATAAATAAATTATTAAAAATAAATGGTTAGAAATTAGAATTGTTTTTAAAAATAAAAATGAAGAAGAGTTAATAAAAACTCGTTTGAATATAGATTTTCGAAGAGGAGTTAATAACTTCTAATGCTAACTCGTACCTAATTATGTCAAACAAACCGCCCCTAAGAGGTTCTTGACTCCCAAAATTTAAAAATAATGTGAAAATGAGTATACATTACATTTATTTTATTATTTTTCTTTTTTGTCCCAATTGACCTCCAAAAGTTTTTTTACTCTTTCCAATAACATGATTTCCATACACGCGTGGATCTATTACTTTCGTTTTACTAGGTTGGTCGCACATATATCATCGAAGCTTAGTTTTTTTTTTTTTTTTTTTTGATGGAGTAGACAGCAAAAATACGTGCAACCAAATATTATAGTTGAAGAAAAAAACCCTATAAATAGTATTTGGATTTTGGTGTTCAAAAGAGGAGAGGAAGGAAAGTTGAAGAAAAAGAGAAAGTAGAGTGATTTGAAGATATAAAGTAGTTGTTTGAAAATTGATGTTTTGGAGAGGAGATGTTGTAAAAGTATTTATTTTATATTGATTTTTTATAATGTAATGATGGTAGATTTTGGATTGATTGATAAATATAATATATTTTATTTTATATTGTGTGGTTGAAAATAAAAGAAAGTTTGATATGATATTTGATAAGATTAGATAAAAGATATTTATATTATATTTTATGGTTGAAAATTAAAAAAAAGGTTTGATGTGACATTTAAAAGATTAAATAAAAGATTTGATGTGATATTAGAGGAGAGGTTGAGGAGAAGTTGGGGAAGGGTTGATAACCTAAAAACAAACATGGAGTTGTGATTTCTCCTCCCCTCCTCTCCCCAACACCAAATCCCAAACACCCCCTAGTAAATTACAAATAGCATTATCATAGTACGTAGTAATTCTTTGAAAATAAAATAATTTTCTTTGAAAAAAATAAGAAAGTAATTTTTCAAAAATATATATTTTGTTATTTTGTAACTTTAATTTATGGTAGTCCCACTTTTGAATCAATTATTTACAAATTCAGCTTTTTATAATTTTTTTTTTTAAATCAAGAAATGAGAGTTTCGCTTCTCTATACCCAAGATACCATTGGGACGCGGCACGAGATATTTCGAAAGATATTCTAGTTTAAATGTTTTCCAACAACTTCGAATCAGAATCTTTTAAATAAATATGTCTTAAAATCCTTAATTTCAACCGTTAGACCTGCCCCTTTGGAGACAGCTTTTTATAACTAAATATAATAAGATTTAATTTTTTTTTTAAAGAAGACAATAATCACATAAAACGAAATATTTTTAAGTCGATAAGAACATTTTTTTTATAAAAAAAATTGAAAATAAAGAAGTGAAATGTATTGTAAAAACTAGTTTTATTTGAGATATTTTCAACAAATTATCCATGAATTAATCTCTACTTAGCTTTACAAAAATAACAAAGAGAGGCTAATATGGTAAATAAAATGATATTCCAGGCTCACCTTCGGAATTGCTATGGTTTTAATGAGTGGGGCAACCAGCATGAACAGGAAACAAGAGTATAAGAAAGGGTGGATTGAAGGAGAGTGTTATGTGGTCAAAGATGGTATATTTGTTGGTGCGGCACTATTGGTTATCGTCAACGGAGGCTTCACCATAGGCTCGATCGCCATGAGCAGAGAAGCCCTCATAGATAACTTGATATTCAAACTTACGACATTTTAA

mRNA sequence

CTGGAAGAGCCTTTTTCTCCGATCACCAGGCCGCCATGGAAAAACCTCGGCCGAGCTTCGCGATAAGCTGTTCCGTCGTCGCCATCCTGACTCTGACCTCCTTCGCTTCATGTATGGCTGCTGAATTCAACAGAAAAAAAGTAAGTTTCTCTTAATTTCCTTCTCATATCAAAGAATTGATTCTTCCTACAAAAAATTCGTGAATCTGACGCAGAAAAAGGACCTGAAATTGAACGGGAGATTGTGTATGTTACCTGAAAGTGAAGCGTTCAAATCGGGAGTTGTGGGTTTGGTGTGCTTGGCGGTGGCGCAGATCTTCGGGAGCGCTGTAATCTGCCATGGCTGTTGGGGAAAGGAGAAATCAAAGAGTTGCAGCGCCATAACGCCCCTGCTTTTCATCTCTTGGCTCACCTTCGGAATTGCTATGGTTTTAATGAGTGGGGCAACCAGCATGAACAGGAAACAAGAGTATAAGAAAGGGTGGATTGAAGGAGAGTGTTATGTGGTCAAAGATGGTATATTTGTTGGTGCGGCACTATTGGTTATCGTCAACGGAGGCTTCACCATAGGCTCGATCGCCATGAGCAGAGAAGCCCTCATAGATAACTTGATATTCAAACTTACGACATTTTAA

Coding sequence (CDS)

ATGTTACCTGAAAGTGAAGCGTTCAAATCGGGAGTTGTGGGTTTGGTGTGCTTGGCGGTGGCGCAGATCTTCGGGAGCGCTGTAATCTGCCATGGCTGTTGGGGAAAGGAGAAATCAAAGAGTTGCAGCGCCATAACGCCCCTGCTTTTCATCTCTTGGCTCACCTTCGGAATTGCTATGGTTTTAATGAGTGGGGCAACCAGCATGAACAGGAAACAAGAGTATAAGAAAGGGTGGATTGAAGGAGAGTGTTATGTGGTCAAAGATGGTATATTTGTTGGTGCGGCACTATTGGTTATCGTCAACGGAGGCTTCACCATAGGCTCGATCGCCATGAGCAGAGAAGCCCTCATAGATAACTTGATATTCAAACTTACGACATTTTAA

Protein sequence

MLPESEAFKSGVVGLVCLAVAQIFGSAVICHGCWGKEKSKSCSAITPLLFISWLTFGIAMVLMSGATSMNRKQEYKKGWIEGECYVVKDGIFVGAALLVIVNGGFTIGSIAMSREALIDNLIFKLTTF

Homology

[Close]

BLAST of Sed0021253 vs. NCBI nr
Match: XP_022139157.1 (uncharacterized protein LOC111010123 isoform X2 [Momordica charantia])

HSP 1 Score: 168.3 bits (425), Expect = 4.3e-38
Identity = 81/119 (68.07%), Postives = 95/119 (79.83%), Query Frame = 0


Query: 2   LPESEAFKSGVVGLVCLAVAQIFGSAVICHGCWGKEKSKSCSAITPL----LFISWLTFG 61
           LPESEAFK GV  LVCL +AQI G+ +ICH  W KEK KSCS   PL    L ISW++FG
Sbjct: 47  LPESEAFKLGVASLVCLVMAQIIGNTIICHSYWPKEKRKSCSVKRPLLSTTLLISWVSFG 106

Query: 62  IAMVLMSGATSMNRKQEYKKGWIEGECYVVKDGIFVGAALLVIVNGGFTIGSIAMSREA 117
           IA+ +MSGATSM+R+QEY KGW+EGECYVVKDGIFVGAALLV++NGG TIGS A+ R +
Sbjct: 107 IAVAMMSGATSMSRRQEYGKGWVEGECYVVKDGIFVGAALLVLINGGSTIGSAAIGRRS 165

[Close]

BLAST of Sed0021253 vs. NCBI nr
Match: XP_022139149.1 (uncharacterized protein LOC111010123 isoform X1 [Momordica charantia])

HSP 1 Score: 168.3 bits (425), Expect = 4.3e-38
Identity = 81/119 (68.07%), Postives = 95/119 (79.83%), Query Frame = 0


Query: 2   LPESEAFKSGVVGLVCLAVAQIFGSAVICHGCWGKEKSKSCSAITPL----LFISWLTFG 61
           LPESEAFK GV  LVCL +AQI G+ +ICH  W KEK KSCS   PL    L ISW++FG
Sbjct: 48  LPESEAFKLGVASLVCLVMAQIIGNTIICHSYWPKEKRKSCSVKRPLLSTTLLISWVSFG 107

Query: 62  IAMVLMSGATSMNRKQEYKKGWIEGECYVVKDGIFVGAALLVIVNGGFTIGSIAMSREA 117
           IA+ +MSGATSM+R+QEY KGW+EGECYVVKDGIFVGAALLV++NGG TIGS A+ R +
Sbjct: 108 IAVAMMSGATSMSRRQEYGKGWVEGECYVVKDGIFVGAALLVLINGGSTIGSAAIGRRS 166

[Close]

BLAST of Sed0021253 vs. NCBI nr
Match: XP_038896171.1 (protein MODIFYING WALL LIGNIN-1 [Benincasa hispida])

HSP 1 Score: 165.2 bits (417), Expect = 3.6e-37
Identity = 80/117 (68.38%), Postives = 95/117 (81.20%), Query Frame = 0


Query: 2   LPESEAFKSGVVGLVCLAVAQIFGSAVICHGCWGKEKSKSCSAITPL----LFISWLTFG 61
           LPESEAFK GV GLVCL +AQI G+A+ICH  W KE  KSCS   P+    L ISW++FG
Sbjct: 49  LPESEAFKLGVGGLVCLIMAQIIGNAIICHSYWPKEHRKSCSVKRPMLSIALLISWVSFG 108

Query: 62  IAMVLMSGATSMNRKQEYKKGWIEGECYVVKDGIFVGAALLVIVNGGFTIGSIAMSR 115
           IA+V+MSGATSM+R+QEY KGW+EGECYVVKDGIFVGAA+LV++NGG TI S A+ R
Sbjct: 109 IAVVMMSGATSMSRRQEYGKGWVEGECYVVKDGIFVGAAVLVLINGGSTISSAAIGR 165

[Close]

BLAST of Sed0021253 vs. NCBI nr
Match: XP_022937014.1 (uncharacterized protein LOC111443438 [Cucurbita moschata])

HSP 1 Score: 160.6 bits (405), Expect = 8.9e-36
Identity = 76/117 (64.96%), Postives = 92/117 (78.63%), Query Frame = 0


Query: 2   LPESEAFKSGVVGLVCLAVAQIFGSAVICHGCWGKEKSKSCSAITPL----LFISWLTFG 61
           LPESEAFK GV G+VCL +A I G+ +ICH  W KE  KSCS   PL    L ISW++FG
Sbjct: 48  LPESEAFKLGVAGIVCLIMAHIIGNTIICHTYWPKEHRKSCSVKRPLLSTTLLISWVSFG 107

Query: 62  IAMVLMSGATSMNRKQEYKKGWIEGECYVVKDGIFVGAALLVIVNGGFTIGSIAMSR 115
           IA+ +M GATSM+R+QEY KGW+EGECY+VKDG+FVGAALLV++NGG TIGS A+ R
Sbjct: 108 IAVAMMMGATSMSRRQEYGKGWVEGECYLVKDGVFVGAALLVLINGGSTIGSAAIGR 164

[Close]

BLAST of Sed0021253 vs. NCBI nr
Match: XP_023535227.1 (uncharacterized protein LOC111796718 [Cucurbita pepo subsp. pepo] >KAG6591859.1 Protein MODIFYING WALL LIGNIN-1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024724.1 hypothetical protein SDJN02_13542, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 160.6 bits (405), Expect = 8.9e-36
Identity = 76/117 (64.96%), Postives = 92/117 (78.63%), Query Frame = 0


Query: 2   LPESEAFKSGVVGLVCLAVAQIFGSAVICHGCWGKEKSKSCSAITPL----LFISWLTFG 61
           LPESEAFK GV G+VCL +A I G+ +ICH  W KE  KSCS   PL    L ISW++FG
Sbjct: 48  LPESEAFKLGVAGIVCLIMAHIIGNTIICHTYWPKEHRKSCSVKRPLLSTTLLISWVSFG 107

Query: 62  IAMVLMSGATSMNRKQEYKKGWIEGECYVVKDGIFVGAALLVIVNGGFTIGSIAMSR 115
           IA+ +M GATSM+R+QEY KGW+EGECY+VKDG+FVGAALLV++NGG TIGS A+ R
Sbjct: 108 IAVAMMMGATSMSRRQEYGKGWVEGECYLVKDGVFVGAALLVLINGGSTIGSAAIGR 164

[Close]

BLAST of Sed0021253 vs. ExPASy Swiss-Prot
Match: A2RVU1 (Protein MODIFYING WALL LIGNIN-1 OS=Arabidopsis thaliana OX=3702 GN=MWL1 PE=1 SV=2)

HSP 1 Score: 100.5 bits (249), Expect = 1.4e-20
Identity = 47/110 (42.73%), Postives = 68/110 (61.82%), Query Frame = 0


Query: 2   LPESEAFKSGVVGLVCLAVAQIFGSAVICHGCWGKEKSKSCSAITPLLFISWLTFGIAMV 61
           LPE+ AF  G+  LVC++VAQI G+ VIC G    +K+++      LL  SW+ F +A+ 
Sbjct: 46  LPENRAFGLGIAALVCVSVAQIVGNVVICRGFTKTDKTRTTIFCIILLLFSWVNFAVAVT 105

Query: 62  LMSGATSMNRKQEYKKGWIEGECYVVKDGIFVGAALLVIVNGGFTIGSIA 112
           L+S   SMNR+Q Y KGW+  ECY+VKDG+F  +  L +      +G+ A
Sbjct: 106 LISVGASMNREQIYGKGWLNRECYLVKDGVFAASGFLSVTTMAAILGAFA 155

[Close]

BLAST of Sed0021253 vs. ExPASy Swiss-Prot
Match: O65708 (Protein MODIFYING WALL LIGNIN-2 OS=Arabidopsis thaliana OX=3702 GN=MWL2 PE=2 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 6.4e-13
Identity = 40/115 (34.78%), Postives = 64/115 (55.65%), Query Frame = 0


Query: 2   LPESEAFKSGVVGLVCLAVAQIFGSAVICHGCWGKEKSKSCSAITP------LLFISWLT 61
           +P S AF  G   ++C  +AQI G+ V+      + K +    IT       LL +SW  
Sbjct: 44  VPGSHAFGLGSAAVLCFCLAQIVGNIVVFRNHRTRTKREDGYKITDLTLPTVLLLLSWSN 103

Query: 62  FGIAMVLMSGATSMNRKQEYKKGWIEGECYVVKDGIFVGAALLVIVN-GGFTIGS 110
           F + ++++S A SM+R Q Y +GW++ +CY+VKDG+F  +  L I+  G  TI +
Sbjct: 104 FVVVVLILSTAISMSRAQAYGEGWLDEDCYLVKDGVFAASGCLAILGLGALTISA 158

[Close]

BLAST of Sed0021253 vs. ExPASy TrEMBL
Match: A0A6J1CD79 (uncharacterized protein LOC111010123 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111010123 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 2.1e-38
Identity = 81/119 (68.07%), Postives = 95/119 (79.83%), Query Frame = 0


Query: 2   LPESEAFKSGVVGLVCLAVAQIFGSAVICHGCWGKEKSKSCSAITPL----LFISWLTFG 61
           LPESEAFK GV  LVCL +AQI G+ +ICH  W KEK KSCS   PL    L ISW++FG
Sbjct: 47  LPESEAFKLGVASLVCLVMAQIIGNTIICHSYWPKEKRKSCSVKRPLLSTTLLISWVSFG 106

Query: 62  IAMVLMSGATSMNRKQEYKKGWIEGECYVVKDGIFVGAALLVIVNGGFTIGSIAMSREA 117
           IA+ +MSGATSM+R+QEY KGW+EGECYVVKDGIFVGAALLV++NGG TIGS A+ R +
Sbjct: 107 IAVAMMSGATSMSRRQEYGKGWVEGECYVVKDGIFVGAALLVLINGGSTIGSAAIGRRS 165

[Close]

BLAST of Sed0021253 vs. ExPASy TrEMBL
Match: A0A6J1CC41 (uncharacterized protein LOC111010123 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111010123 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 2.1e-38
Identity = 81/119 (68.07%), Postives = 95/119 (79.83%), Query Frame = 0


Query: 2   LPESEAFKSGVVGLVCLAVAQIFGSAVICHGCWGKEKSKSCSAITPL----LFISWLTFG 61
           LPESEAFK GV  LVCL +AQI G+ +ICH  W KEK KSCS   PL    L ISW++FG
Sbjct: 48  LPESEAFKLGVASLVCLVMAQIIGNTIICHSYWPKEKRKSCSVKRPLLSTTLLISWVSFG 107

Query: 62  IAMVLMSGATSMNRKQEYKKGWIEGECYVVKDGIFVGAALLVIVNGGFTIGSIAMSREA 117
           IA+ +MSGATSM+R+QEY KGW+EGECYVVKDGIFVGAALLV++NGG TIGS A+ R +
Sbjct: 108 IAVAMMSGATSMSRRQEYGKGWVEGECYVVKDGIFVGAALLVLINGGSTIGSAAIGRRS 166

[Close]

BLAST of Sed0021253 vs. ExPASy TrEMBL
Match: A0A6J1F9Y8 (uncharacterized protein LOC111443438 OS=Cucurbita moschata OX=3662 GN=LOC111443438 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 4.3e-36
Identity = 76/117 (64.96%), Postives = 92/117 (78.63%), Query Frame = 0


Query: 2   LPESEAFKSGVVGLVCLAVAQIFGSAVICHGCWGKEKSKSCSAITPL----LFISWLTFG 61
           LPESEAFK GV G+VCL +A I G+ +ICH  W KE  KSCS   PL    L ISW++FG
Sbjct: 48  LPESEAFKLGVAGIVCLIMAHIIGNTIICHTYWPKEHRKSCSVKRPLLSTTLLISWVSFG 107

Query: 62  IAMVLMSGATSMNRKQEYKKGWIEGECYVVKDGIFVGAALLVIVNGGFTIGSIAMSR 115
           IA+ +M GATSM+R+QEY KGW+EGECY+VKDG+FVGAALLV++NGG TIGS A+ R
Sbjct: 108 IAVAMMMGATSMSRRQEYGKGWVEGECYLVKDGVFVGAALLVLINGGSTIGSAAIGR 164

[Close]

BLAST of Sed0021253 vs. ExPASy TrEMBL
Match: A0A6J1II23 (uncharacterized protein LOC111477105 OS=Cucurbita maxima OX=3661 GN=LOC111477105 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 9.6e-36
Identity = 75/116 (64.66%), Postives = 92/116 (79.31%), Query Frame = 0


Query: 2   LPESEAFKSGVVGLVCLAVAQIFGSAVICHGCWGKEKSKSCSAITPL---LFISWLTFGI 61
           LPESEAFK GV G+VCL +A I G+ +ICH  W KE  KSCS   PL   L ISW++FGI
Sbjct: 48  LPESEAFKLGVAGIVCLIMAHIIGNTIICHTYWPKEHRKSCSVKRPLLTTLLISWVSFGI 107

Query: 62  AMVLMSGATSMNRKQEYKKGWIEGECYVVKDGIFVGAALLVIVNGGFTIGSIAMSR 115
           A+ ++ GATSM+R+QEY KGW+EGECY+VKDG+FVGAALLV++NGG TIGS A+ R
Sbjct: 108 AVAMIMGATSMSRRQEYGKGWVEGECYLVKDGVFVGAALLVLINGGSTIGSAAIGR 163

[Close]

BLAST of Sed0021253 vs. ExPASy TrEMBL
Match: A0A1S3B9G0 (uncharacterized protein LOC103487629 OS=Cucumis melo OX=3656 GN=LOC103487629 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 2.8e-35
Identity = 77/117 (65.81%), Postives = 93/117 (79.49%), Query Frame = 0


Query: 2   LPESEAFKSGVVGLVCLAVAQIFGSAVICHGCWGKEKSKSCSAITPL----LFISWLTFG 61
           LPESEAFK G+ GLVCL +AQI GS +I H  W KE  KSCS   PL    L ISW++F 
Sbjct: 49  LPESEAFKLGIGGLVCLIMAQIIGSTLIYHSYWPKEHRKSCSVKKPLLSIALLISWVSFV 108

Query: 62  IAMVLMSGATSMNRKQEYKKGWIEGECYVVKDGIFVGAALLVIVNGGFTIGSIAMSR 115
           IA+++MSGATSM+R+QEY +GW+EGECY+VKDGIFVGAALLV++NGG TIGS A+ R
Sbjct: 109 IAVIMMSGATSMSRRQEYARGWVEGECYLVKDGIFVGAALLVLINGGSTIGSAAIGR 165

[Close]

BLAST of Sed0021253 vs. TAIR 10
Match: AT1G31720.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 100.5 bits (249), Expect = 1.0e-21
Identity = 47/110 (42.73%), Postives = 68/110 (61.82%), Query Frame = 0


Query: 2   LPESEAFKSGVVGLVCLAVAQIFGSAVICHGCWGKEKSKSCSAITPLLFISWLTFGIAMV 61
           LPE+ AF  G+  LVC++VAQI G+ VIC G    +K+++      LL  SW+ F +A+ 
Sbjct: 65  LPENRAFGLGIAALVCVSVAQIVGNVVICRGFTKTDKTRTTIFCIILLLFSWVNFAVAVT 124

Query: 62  LMSGATSMNRKQEYKKGWIEGECYVVKDGIFVGAALLVIVNGGFTIGSIA 112
           L+S   SMNR+Q Y KGW+  ECY+VKDG+F  +  L +      +G+ A
Sbjct: 125 LISVGASMNREQIYGKGWLNRECYLVKDGVFAASGFLSVTTMAAILGAFA 174

[Close]

BLAST of Sed0021253 vs. TAIR 10
Match: AT4G19370.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 75.1 bits (183), Expect = 4.6e-14
Identity = 40/115 (34.78%), Postives = 64/115 (55.65%), Query Frame = 0


Query: 2   LPESEAFKSGVVGLVCLAVAQIFGSAVICHGCWGKEKSKSCSAITP------LLFISWLT 61
           +P S AF  G   ++C  +AQI G+ V+      + K +    IT       LL +SW  
Sbjct: 44  VPGSHAFGLGSAAVLCFCLAQIVGNIVVFRNHRTRTKREDGYKITDLTLPTVLLLLSWSN 103

Query: 62  FGIAMVLMSGATSMNRKQEYKKGWIEGECYVVKDGIFVGAALLVIVN-GGFTIGS 110
           F + ++++S A SM+R Q Y +GW++ +CY+VKDG+F  +  L I+  G  TI +
Sbjct: 104 FVVVVLILSTAISMSRAQAYGEGWLDEDCYLVKDGVFAASGCLAILGLGALTISA 158

The following BLAST results are available for this feature:

BLAST of Sed0021253 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022139157.1	4.3e-38	68.07	uncharacterized protein LOC111010123 isoform X2 [Momordica charantia]	[more]
XP_022139149.1	4.3e-38	68.07	uncharacterized protein LOC111010123 isoform X1 [Momordica charantia]	[more]
XP_038896171.1	3.6e-37	68.38	protein MODIFYING WALL LIGNIN-1 [Benincasa hispida]	[more]
XP_022937014.1	8.9e-36	64.96	uncharacterized protein LOC111443438 [Cucurbita moschata]	[more]
XP_023535227.1	8.9e-36	64.96	uncharacterized protein LOC111796718 [Cucurbita pepo subsp. pepo] >KAG6591859.1 ...	[more]

BLAST of Sed0021253 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A2RVU1	1.4e-20	42.73	Protein MODIFYING WALL LIGNIN-1 OS=Arabidopsis thaliana OX=3702 GN=MWL1 PE=1 SV=...	[more]
O65708	6.4e-13	34.78	Protein MODIFYING WALL LIGNIN-2 OS=Arabidopsis thaliana OX=3702 GN=MWL2 PE=2 SV=...	[more]

BLAST of Sed0021253 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CD79	2.1e-38	68.07	uncharacterized protein LOC111010123 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1CC41	2.1e-38	68.07	uncharacterized protein LOC111010123 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1F9Y8	4.3e-36	64.96	uncharacterized protein LOC111443438 OS=Cucurbita moschata OX=3662 GN=LOC1114434...	[more]
A0A6J1II23	9.6e-36	64.66	uncharacterized protein LOC111477105 OS=Cucurbita maxima OX=3661 GN=LOC111477105...	[more]
A0A1S3B9G0	2.8e-35	65.81	uncharacterized protein LOC103487629 OS=Cucumis melo OX=3656 GN=LOC103487629 PE=...	[more]

BLAST of Sed0021253 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G31720.1	1.0e-21	42.73	Protein of unknown function (DUF1218)	[more]
AT4G19370.1	4.6e-14	34.78	Protein of unknown function (DUF1218)	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009606	Modifying wall lignin-1/2	PFAM	PF06749	DUF1218	coord: 15..101 e-value: 3.4E-17 score: 62.7
None	No IPR available	PANTHER	PTHR31769	OS07G0462200 PROTEIN-RELATED	coord: 2..112
None	No IPR available	PANTHER	PTHR31769:SF6	PROTEIN MODIFYING WALL LIGNIN-1	coord: 2..112

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0021253.1	Sed0021253.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane