Sed0021220 (gene) Chayote v1

Overview


Name	Sed0021220
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Squamosa promoter-binding-like protein 13A
Location	LG12: 34626484 .. 34629789 (-)
RNA-Seq Expression	Sed0021220
Synteny	Sed0021220

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTTTGTTTTTGGTCATGTGTATGATGCATTTGTGTTTCCTTGTTATTTGAACAATGAAAGCATGCCAACAAATGTGAAACACAATGCAAAGCCTAATCCCACTTGCTCTGCCTGTCTCCACCCACCATCCCTTTTTCTGAAGGTTGAAAGCAACAAACAGCTGTCTCTTTTAATATCAACCTCCCCCCACACCTTAAACAAACCCTAACCAGGAAGAAACTTTATAAAGTTGGCGGCTCCTTTTGGTTATTCACAACACCTTCAATCCTAACATTGACATCTTGTTGACAGGTTCAAAGAGTGGCTCTTCTTCAGTAACCTACAGCCCTAGCTTTTTATGGTGTTTTTCCCCCCTTCTTTTTTGGCTTTTATTGCTTATAATTCCCCCCTTTTACTACAAACTTTAATTGCTTGGTGGAATTCTTGTCAGTGAATGAATGGTTGTCAAATAGCAACCCATTTGTCCTCTGCAGCTCTAGTCTCTGCAAGTACTCTTCATCCTTCATTTTCTCAACTCTCAACTTAGTATTTGTCTTGTTACTTATTCCTCTAATTCTTTGCATATTTACTTGGAGTAATATCTGCTGCTACTGCAAATATTTCCATAATGCTAAAAGGAAAGAGCCACAATTTCCATTGATGTGATGTTTGCTTGCTTGCTTCACTCTTGTGACTTATTCTTCTGCTAACTCCAATCTACTTGGAGTAATATCTGAAACTGCAGCTGCACTCCTGATATATTTTCAGTTTGCTAAAATCCAAGAGGCATAGTCACCACTGATGTGATATTTTGTGTGCTAGGAACATGCAAATAACTGTCTTACAGATTCCTGTGTTTGTTGTATTGGTTGATATAATTAAATGTATCGCAACCCATAAATTTAAGTTTTTGGGTTGATTGGTGATTTAACATGATTCAACATAGTAACAGGTGTTTAAATCTCTCCCTGATCCTTGTATTTCCAATTAATATTAAATGACATATTGTTTAGTGCGCTCTGCTCTAGTTATATTCATTTCCTGTCAGTCATAAAGTATTTGATACTGATTTTGTGGACTTGGTTGAAATGCTCCAATTTCATGGGGGTTCTTACAGTTTTATGTCCTCTTTTCTTCAGGTTTCTGTGATCTTCAGTAGTTGAATTTAATGCAGAAGTCATTATAAGAGTGATTCGAACTCTGAAAAGGACGTTCAAGTGGAAAAGAAGCAAAGAAGTGAACTACTTTCTATGGACTGGAACTTGAAGGCCCCATCTTGGGATTTCACTCAATTTGAACAAGATGCATTGAAGAACAGTTATACAATAGGCGCATCCAGCAGCTTTGTGGAACATAGGACAACATCTCGAGACTTCTCGGTTGATTTGAAACTCGGTCAGGTCCGTGATCTGGGAACAAAATATCTAGTCAACGAGCCTGGAGTCTTTAAAATGACACCATCTCCTTCCGAACCATCCAAGAGGGCAAGAGCATCTGGGAATGGGGCACAGCCTTTGTCATGCCTTGTTGATGGATGCATTTCAGACCTTAGCAACTTCAGAGATTACCACAGGCGCCACAAGGTCTGCGAACTTCATTCGAAGACTCCCCAGGTCACAATTGGTGGCCTAAAACAAAGGTTCTGTCAGCAGTGCAGTAGGTAGAGTGCTATTTTAATTCCAGTTTGTTTCTTGATATGCTCGCTTTCATAATGTGACTAACTGTTCTATACACTTCCATGCATTCGAACTCTCGTTGCTTAATAACAATTCTACACTATATAGGTTTCATTCTCTAGAGGAATTTGATGAAGGAAAGAGAAGCTGCAGGAAACGCCTGGACGGACACAATCGAAGGCGTCGGAAGCCACAGCCAGAGTCCCTATCACGGACCATTTTGTCTCATTACCAAGGTTAGCTGTGGAATTATCCTAATGAACTTGGTGTTTTTGCTTTTTCTTTCTTCATAATTGTTGGTTTGTGATTTAGTCATTTCCACCTCCACCATTGTTCTTAGACTACCTCCATGTTGAAGATGTCTCTTCATCGAATCACTCTGATTTTTGACAATATGTGGGGTGGAAGACCTAAACTCTAACGTTGAAGTCATTAGTACAAGATATTGGTTGAATTATGCTTATTTTGACAACTTAACATTTTTTTTGTTATCCACATGAACCAGAAACTTTACTTCAAGATAAAAATCATATGTCGAGAATTTCTAATTTCCTTGTTTCTGATTCACTCGCAAACACAGTTGATTTATGTACCAATCTCATTCTATACTTCGTGAAAATATGAGTTGACTGCTTTTGATATGGACCCATCTTTTTTTTAATTCAACCGCATTTGGGGATGGGGGACTTGAACCCATTATCTCTTGGTTACGAAGTCATACATCATACCATTTGAGTTCAGGGCTTGTCGGTGTCATGGATCCATCTTTATTTCCAACAAAAGTGCTCAGTGGGAAAAAGTCTCTCTTTTCATTGAGAAGTACAAAATCATACGGTTTAACAAACCATTTTCTGCTTTCAGGTTCCCAACTCTTACCATTTGCTACCTCATATGTCTATCCATCTACAACTGTTGCCAACCATTCATGGGGGGGTGGAATTGCCAATACCGAGACAGATGCAAGGCTTCATGTCCAGCAAGAGCCAACCCACTTCCCTGATAAACACAATATGTATCTTGGGTCCTCATCAAACGATAGCATCCATAAAATTCGAAAGCAGGTCTCGTTTCTGCAAAGCGACAATCCGAAATCTTCAGTCAGCCAGCCCCTTGTCAAGACCATTGACTTTTCAGAAAATGGAGGCGGTTGGAGCAAAGTGTTATACGAAAGGTTTACAACTCCAGGCCATGAATCGGATTGTGCTCTCTCTCTTCTGTCATCTTTGCAGACACAGTCATATGGGATCGGTTTAAGCCAAACCGAGCAGGACCGTAATCTAATATCCTTCCTGCAGCCATTAGATGGGAGCTTAGGACATCACAACAGCTTGGAGCCAGTTAATTCAGCTCTAAATGGCAGTGTGAGTAATGCAGATATCAATTACTCAGGAATGTTTCACATTGCTTCTGCTGATGGAGGGAATGAAGCACCCCCACAATCCCTTCCTTCTAATTCGCAGTAAAAAAAAACTACAGTACCCAAAAACTGATCTTTTTGTATAAAAAAGAAGGAACAAATGGTGATTCTGTAAAACTATGTCCATGATATTTGGATGGATGTCGACTCTATTTTAAATTCAACTGATGGCTGTTAACAATGATACTTTCTCATTTCAACTTCCATTACCTTGTCATTTTTCTTACCTGGA

mRNA sequence

GTTTTTGTTTTTGGTCATGTGTATGATGCATTTGTGTTTCCTTGTTATTTGAACAATGAAAGCATGCCAACAAATGTGAAACACAATGCAAAGCCTAATCCCACTTGCTCTGCCTGTCTCCACCCACCATCCCTTTTTCTGAAGGTTGAAAGCAACAAACAGCTGTCTCTTTTAATATCAACCTCCCCCCACACCTTAAACAAACCCTAACCAGGAAGAAACTTTATAAAGTTGGCGGCTCCTTTTGGTTATTCACAACACCTTCAATCCTAACATTGACATCTTGTTGACAGGTTCAAAGAGTGGCTCTTCTTCAGTAACCTACAGCCCTAGCTTTTTATGGTGTTTTTCCCCCCTTCTTTTTTGGCTTTTATTGCTTATAATTCCCCCCTTTTACTACAAACTTTAATTGCTTGGTGGAATTCTTGTCAGTGAATGAATGGTTGTCAAATAGCAACCCATTTGTCCTCTGCAGCTCTAGTCTCTGCAAGTTTCTGTGATCTTCAGTAGTTGAATTTAATGCAGAAGTCATTATAAGAGTGATTCGAACTCTGAAAAGGACGTTCAAGTGGAAAAGAAGCAAAGAAGTGAACTACTTTCTATGGACTGGAACTTGAAGGCCCCATCTTGGGATTTCACTCAATTTGAACAAGATGCATTGAAGAACAGTTATACAATAGGCGCATCCAGCAGCTTTGTGGAACATAGGACAACATCTCGAGACTTCTCGGTTGATTTGAAACTCGGTCAGGTCCGTGATCTGGGAACAAAATATCTAGTCAACGAGCCTGGAGTCTTTAAAATGACACCATCTCCTTCCGAACCATCCAAGAGGGCAAGAGCATCTGGGAATGGGGCACAGCCTTTGTCATGCCTTGTTGATGGATGCATTTCAGACCTTAGCAACTTCAGAGATTACCACAGGCGCCACAAGGTCTGCGAACTTCATTCGAAGACTCCCCAGGTCACAATTGGTGGCCTAAAACAAAGGTTCTGTCAGCAGTGCAGTAGGTTTCATTCTCTAGAGGAATTTGATGAAGGAAAGAGAAGCTGCAGGAAACGCCTGGACGGACACAATCGAAGGCGTCGGAAGCCACAGCCAGAGTCCCTATCACGGACCATTTTGTCTCATTACCAAGGTTCCCAACTCTTACCATTTGCTACCTCATATGTCTATCCATCTACAACTGTTGCCAACCATTCATGGGGGGGTGGAATTGCCAATACCGAGACAGATGCAAGGCTTCATGTCCAGCAAGAGCCAACCCACTTCCCTGATAAACACAATATGTATCTTGGGTCCTCATCAAACGATAGCATCCATAAAATTCGAAAGCAGGTCTCGTTTCTGCAAAGCGACAATCCGAAATCTTCAGTCAGCCAGCCCCTTGTCAAGACCATTGACTTTTCAGAAAATGGAGGCGGTTGGAGCAAAGTGTTATACGAAAGGTTTACAACTCCAGGCCATGAATCGGATTGTGCTCTCTCTCTTCTGTCATCTTTGCAGACACAGTCATATGGGATCGGTTTAAGCCAAACCGAGCAGGACCGTAATCTAATATCCTTCCTGCAGCCATTAGATGGGAGCTTAGGACATCACAACAGCTTGGAGCCAGTTAATTCAGCTCTAAATGGCAGTGTGAGTAATGCAGATATCAATTACTCAGGAATGTTTCACATTGCTTCTGCTGATGGAGGGAATGAAGCACCCCCACAATCCCTTCCTTCTAATTCGCAGTAAAAAAAAACTACAGTACCCAAAAACTGATCTTTTTGTATAAAAAAGAAGGAACAAATGGTGATTCTGTAAAACTATGTCCATGATATTTGGATGGATGTCGACTCTATTTTAAATTCAACTGATGGCTGTTAACAATGATACTTTCTCATTTCAACTTCCATTACCTTGTCATTTTTCTTACCTGGA

Coding sequence (CDS)

ATGGACTGGAACTTGAAGGCCCCATCTTGGGATTTCACTCAATTTGAACAAGATGCATTGAAGAACAGTTATACAATAGGCGCATCCAGCAGCTTTGTGGAACATAGGACAACATCTCGAGACTTCTCGGTTGATTTGAAACTCGGTCAGGTCCGTGATCTGGGAACAAAATATCTAGTCAACGAGCCTGGAGTCTTTAAAATGACACCATCTCCTTCCGAACCATCCAAGAGGGCAAGAGCATCTGGGAATGGGGCACAGCCTTTGTCATGCCTTGTTGATGGATGCATTTCAGACCTTAGCAACTTCAGAGATTACCACAGGCGCCACAAGGTCTGCGAACTTCATTCGAAGACTCCCCAGGTCACAATTGGTGGCCTAAAACAAAGGTTCTGTCAGCAGTGCAGTAGGTTTCATTCTCTAGAGGAATTTGATGAAGGAAAGAGAAGCTGCAGGAAACGCCTGGACGGACACAATCGAAGGCGTCGGAAGCCACAGCCAGAGTCCCTATCACGGACCATTTTGTCTCATTACCAAGGTTCCCAACTCTTACCATTTGCTACCTCATATGTCTATCCATCTACAACTGTTGCCAACCATTCATGGGGGGGTGGAATTGCCAATACCGAGACAGATGCAAGGCTTCATGTCCAGCAAGAGCCAACCCACTTCCCTGATAAACACAATATGTATCTTGGGTCCTCATCAAACGATAGCATCCATAAAATTCGAAAGCAGGTCTCGTTTCTGCAAAGCGACAATCCGAAATCTTCAGTCAGCCAGCCCCTTGTCAAGACCATTGACTTTTCAGAAAATGGAGGCGGTTGGAGCAAAGTGTTATACGAAAGGTTTACAACTCCAGGCCATGAATCGGATTGTGCTCTCTCTCTTCTGTCATCTTTGCAGACACAGTCATATGGGATCGGTTTAAGCCAAACCGAGCAGGACCGTAATCTAATATCCTTCCTGCAGCCATTAGATGGGAGCTTAGGACATCACAACAGCTTGGAGCCAGTTAATTCAGCTCTAAATGGCAGTGTGAGTAATGCAGATATCAATTACTCAGGAATGTTTCACATTGCTTCTGCTGATGGAGGGAATGAAGCACCCCCACAATCCCTTCCTTCTAATTCGCAGTAA

Protein sequence

MDWNLKAPSWDFTQFEQDALKNSYTIGASSSFVEHRTTSRDFSVDLKLGQVRDLGTKYLVNEPGVFKMTPSPSEPSKRARASGNGAQPLSCLVDGCISDLSNFRDYHRRHKVCELHSKTPQVTIGGLKQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQPESLSRTILSHYQGSQLLPFATSYVYPSTTVANHSWGGGIANTETDARLHVQQEPTHFPDKHNMYLGSSSNDSIHKIRKQVSFLQSDNPKSSVSQPLVKTIDFSENGGGWSKVLYERFTTPGHESDCALSLLSSLQTQSYGIGLSQTEQDRNLISFLQPLDGSLGHHNSLEPVNSALNGSVSNADINYSGMFHIASADGGNEAPPQSLPSNSQ

Homology

[Close]

BLAST of Sed0021220 vs. NCBI nr
Match: XP_038879374.1 (squamosa promoter-binding-like protein 13A [Benincasa hispida] >XP_038879375.1 squamosa promoter-binding-like protein 13A [Benincasa hispida] >XP_038879376.1 squamosa promoter-binding-like protein 13A [Benincasa hispida] >XP_038879377.1 squamosa promoter-binding-like protein 13A [Benincasa hispida])

HSP 1 Score: 644.8 bits (1662), Expect = 4.6e-181
Identity = 317/379 (83.64%), Postives = 342/379 (90.24%), Query Frame = 0


Query: 1   MDWNLKAPSWDFTQFEQDALKNSYTIGASSSFVEHRTTSRDFSVDLKLGQVRDLGTKYLV 60
           MDWNLK PSWDFTQ EQDALKN  TIGASSSFVEHRTTS DFSVDLKLGQV +LGTKY+V
Sbjct: 1   MDWNLKTPSWDFTQLEQDALKNINTIGASSSFVEHRTTSGDFSVDLKLGQVNNLGTKYVV 60

Query: 61  NEPGVFKMTPSPSEPSKRARASGNGAQPLSCLVDGCISDLSNFRDYHRRHKVCELHSKTP 120
           N+PGVFKM PSPSEPSKRAR SGNGAQP SCLVDGC+SDLSN+RDYHRRHKVCELHSKTP
Sbjct: 61  NKPGVFKMAPSPSEPSKRARGSGNGAQPSSCLVDGCVSDLSNYRDYHRRHKVCELHSKTP 120

Query: 121 QVTIGGLKQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQPESLSRTILSHYQG 180
           QVTIGGLKQRFCQQCSRFHSL+EFDEGKRSCRKRLDGHNRRRRKPQ +SLSR+ILS YQG
Sbjct: 121 QVTIGGLKQRFCQQCSRFHSLDEFDEGKRSCRKRLDGHNRRRRKPQSDSLSRSILSPYQG 180

Query: 181 SQLLPFATSYVYPSTTVANHSWGGGIANTETDARLHVQQEPTHFPDKHNMYLGSSSNDSI 240
           SQLLP +TS+VYPST V +HSW     NT+ DARLHVQQEPTHFPDKHN+YLGSSSNDSI
Sbjct: 181 SQLLPLSTSHVYPSTIVMSHSWCDIANNTQIDARLHVQQEPTHFPDKHNIYLGSSSNDSI 240

Query: 241 HKIRKQVSFLQSDNPKSSVSQPLVKTIDFSENGGGWSKVLYERFTTPGHESDCALSLLSS 300
           HKI KQV+F+QSDNP+SS SQPLV TIDFSENGGG  K+LY++F TPGHES+CALSLLSS
Sbjct: 241 HKIGKQVTFMQSDNPESSFSQPLVTTIDFSENGGGRRKMLYDKFATPGHESNCALSLLSS 300

Query: 301 LQTQSYGIGLSQTEQDRNLISFLQPLDGSLGHHNSLEPVNSALNGSVSNADINYSGMFHI 360
           LQTQS GIG S+ EQDR+LISFLQPLD SLGHHN LEPVNS LNGSVSNADIN SGMFHI
Sbjct: 301 LQTQSSGIGFSEAEQDRHLISFLQPLDVSLGHHNRLEPVNSVLNGSVSNADINCSGMFHI 360

Query: 361 ASADGGNEAPPQSLPSNSQ 380
           +S DGGN+APP SLP + Q
Sbjct: 361 SSNDGGNDAPPPSLPFHWQ 379

[Close]

BLAST of Sed0021220 vs. NCBI nr
Match: XP_031740302.1 (squamosa promoter-binding-like protein 13A [Cucumis sativus] >XP_031740305.1 squamosa promoter-binding-like protein 13A [Cucumis sativus] >XP_031740309.1 squamosa promoter-binding-like protein 13A [Cucumis sativus] >KGN63473.1 hypothetical protein Csa_013536 [Cucumis sativus])

HSP 1 Score: 644.0 bits (1660), Expect = 7.9e-181
Identity = 317/379 (83.64%), Postives = 342/379 (90.24%), Query Frame = 0


Query: 1   MDWNLKAPSWDFTQFEQDALKNSYTIGASSSFVEHRTTSRDFSVDLKLGQVRDLGTKYLV 60
           MDWNLK PSWDFTQ EQDALKN  +IGASS+FVEH  TS DF+VDLKLGQV +LGTKY+V
Sbjct: 1   MDWNLKTPSWDFTQLEQDALKNINSIGASSNFVEHIATSGDFTVDLKLGQVSNLGTKYVV 60

Query: 61  NEPGVFKMTPSPSEPSKRARASGNGAQPLSCLVDGCISDLSNFRDYHRRHKVCELHSKTP 120
           NEPGVFKM PSPSEPSKRAR SGNGAQPLSCLVDGC+SDLSN+RDYHRRHKVCELHSKTP
Sbjct: 61  NEPGVFKMAPSPSEPSKRARGSGNGAQPLSCLVDGCVSDLSNYRDYHRRHKVCELHSKTP 120

Query: 121 QVTIGGLKQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQPESLSRTILSHYQG 180
           QVTIGGLKQRFCQQCSRFHSL+EFDEGKRSCRKRLDGHNRRRRKPQ +SLSR+ILSHYQG
Sbjct: 121 QVTIGGLKQRFCQQCSRFHSLDEFDEGKRSCRKRLDGHNRRRRKPQSDSLSRSILSHYQG 180

Query: 181 SQLLPFATSYVYPSTTVANHSWGGGIANTETDARLHVQQEPTHFPDKHNMYLGSSSNDSI 240
           SQLLPF++S+VYPST V NHSW     NTE DARLHVQQEPTHFPDKHN+YLGSSSNDS+
Sbjct: 181 SQLLPFSSSHVYPSTLVMNHSWRDLANNTEIDARLHVQQEPTHFPDKHNIYLGSSSNDSV 240

Query: 241 HKIRKQVSFLQSDNPKSSVSQPLVKTIDFSENGGGWSKVLYERFTTPGHESDCALSLLSS 300
           HKI KQV+F+QSDNP+SSV QPLVKTIDFSEN  G SK+LY+ F TPGHESDCALSLLSS
Sbjct: 241 HKIGKQVTFMQSDNPESSVGQPLVKTIDFSENEIGRSKMLYDGFKTPGHESDCALSLLSS 300

Query: 301 LQTQSYGIGLSQTEQDRNLISFLQPLDGSLGHHNSLEPVNSALNGSVSNADINYSGMFHI 360
           LQTQ+ GIG S+ EQDR+LISFLQPLD SLGHHNSLEP+NS LNGSVSNADIN SGMFHI
Sbjct: 301 LQTQASGIGFSEAEQDRHLISFLQPLDVSLGHHNSLEPINSVLNGSVSNADINCSGMFHI 360

Query: 361 ASADGGNEAPPQSLPSNSQ 380
           AS DG NEAPP SLP + Q
Sbjct: 361 ASNDGCNEAPPPSLPFHWQ 379

[Close]

BLAST of Sed0021220 vs. NCBI nr
Match: XP_008464414.1 (PREDICTED: squamosa promoter-binding-like protein 13A [Cucumis melo] >XP_008464415.1 PREDICTED: squamosa promoter-binding-like protein 13A [Cucumis melo] >XP_008464416.1 PREDICTED: squamosa promoter-binding-like protein 13A [Cucumis melo] >XP_008464417.1 PREDICTED: squamosa promoter-binding-like protein 13A [Cucumis melo] >TYJ98443.1 squamosa promoter-binding-like protein 13A [Cucumis melo var. makuwa])

HSP 1 Score: 635.6 bits (1638), Expect = 2.8e-178
Identity = 314/379 (82.85%), Postives = 340/379 (89.71%), Query Frame = 0


Query: 1   MDWNLKAPSWDFTQFEQDALKNSYTIGASSSFVEHRTTSRDFSVDLKLGQVRDLGTKYLV 60
           MDWNLK PSWDFTQ EQDALKN  TIGASS+FVEH TTS DF+VDLKLGQV +LGTKY+V
Sbjct: 1   MDWNLKTPSWDFTQLEQDALKNINTIGASSNFVEHITTSGDFTVDLKLGQVSNLGTKYVV 60

Query: 61  NEPGVFKMTPSPSEPSKRARASGNGAQPLSCLVDGCISDLSNFRDYHRRHKVCELHSKTP 120
           NEPGVFK+TPSPSEPSKRAR SGNGAQP SCLVDGC+SDLSN+RDYHRRHKVCELHSKTP
Sbjct: 61  NEPGVFKVTPSPSEPSKRARGSGNGAQPSSCLVDGCVSDLSNYRDYHRRHKVCELHSKTP 120

Query: 121 QVTIGGLKQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQPESLSRTILSHYQG 180
           QVTIGGL QRFCQQCSRFHSL+EFDEGKRSCRKRLDGHNRRRRKPQ +SLSR+ILSHYQG
Sbjct: 121 QVTIGGLTQRFCQQCSRFHSLDEFDEGKRSCRKRLDGHNRRRRKPQSDSLSRSILSHYQG 180

Query: 181 SQLLPFATSYVYPSTTVANHSWGGGIANTETDARLHVQQEPTHFPDKHNMYLGSSSNDSI 240
           SQL PF++S+VYPST V NHSW     NTE DARLHVQQEPTHFPDKHN+YLGSSSNDS+
Sbjct: 181 SQLSPFSSSHVYPSTLVMNHSWRDLANNTEIDARLHVQQEPTHFPDKHNIYLGSSSNDSV 240

Query: 241 HKIRKQVSFLQSDNPKSSVSQPLVKTIDFSENGGGWSKVLYERFTTPGHESDCALSLLSS 300
           HKI KQV+F+QSDNP+SSV QPLVKTIDFSEN    SK+LY+RF TPGHESDCALSLLSS
Sbjct: 241 HKIGKQVTFMQSDNPESSVGQPLVKTIDFSENEVCRSKMLYDRFKTPGHESDCALSLLSS 300

Query: 301 LQTQSYGIGLSQTEQDRNLISFLQPLDGSLGHHNSLEPVNSALNGSVSNADINYSGMFHI 360
           LQTQ+ GIG S+ EQDR+LISFLQPLD SLGHHNSLEP+NS LNGSVSNA+IN SGMFHI
Sbjct: 301 LQTQASGIGFSEAEQDRHLISFLQPLDVSLGHHNSLEPINSVLNGSVSNANINCSGMFHI 360

Query: 361 ASADGGNEAPPQSLPSNSQ 380
           AS DG NEA P SLP + Q
Sbjct: 361 ASNDGCNEATPPSLPFHWQ 379

[Close]

BLAST of Sed0021220 vs. NCBI nr
Match: KAA0057762.1 (squamosa promoter-binding-like protein 13A [Cucumis melo var. makuwa])

HSP 1 Score: 632.5 bits (1630), Expect = 2.4e-177
Identity = 313/379 (82.59%), Postives = 338/379 (89.18%), Query Frame = 0


Query: 1   MDWNLKAPSWDFTQFEQDALKNSYTIGASSSFVEHRTTSRDFSVDLKLGQVRDLGTKYLV 60
           MDWNLK PSWDFTQ EQDALKN  TIGASS+FVEH TTS DF+VDLKLGQV +LGTKY+V
Sbjct: 1   MDWNLKTPSWDFTQLEQDALKNINTIGASSNFVEHITTSGDFTVDLKLGQVSNLGTKYVV 60

Query: 61  NEPGVFKMTPSPSEPSKRARASGNGAQPLSCLVDGCISDLSNFRDYHRRHKVCELHSKTP 120
           NEPGVFK TPSPSEPSKRAR SGNGAQP SCLVDGC+SDLSN+RDYHRRHKVCELHSKTP
Sbjct: 61  NEPGVFKATPSPSEPSKRARGSGNGAQPSSCLVDGCVSDLSNYRDYHRRHKVCELHSKTP 120

Query: 121 QVTIGGLKQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQPESLSRTILSHYQG 180
           QVTIGGL QRFCQQCSRFHSL+EFDEGKRSCRKRLDGHNRRRRKPQ +SLSR+ILSHYQG
Sbjct: 121 QVTIGGLTQRFCQQCSRFHSLDEFDEGKRSCRKRLDGHNRRRRKPQSDSLSRSILSHYQG 180

Query: 181 SQLLPFATSYVYPSTTVANHSWGGGIANTETDARLHVQQEPTHFPDKHNMYLGSSSNDSI 240
           SQL PF++S+VYPST V NHSW     NTE DARLHVQQEPTHFPDKHN+YLGSSSNDS+
Sbjct: 181 SQLSPFSSSHVYPSTLVMNHSWRDLANNTEIDARLHVQQEPTHFPDKHNIYLGSSSNDSV 240

Query: 241 HKIRKQVSFLQSDNPKSSVSQPLVKTIDFSENGGGWSKVLYERFTTPGHESDCALSLLSS 300
           HKI KQV+F+QSDNP+ SV QPLVKTIDFSEN    SK+LY+RF TPGHESDCALSLLSS
Sbjct: 241 HKIGKQVTFMQSDNPEFSVGQPLVKTIDFSENEVCRSKMLYDRFKTPGHESDCALSLLSS 300

Query: 301 LQTQSYGIGLSQTEQDRNLISFLQPLDGSLGHHNSLEPVNSALNGSVSNADINYSGMFHI 360
           LQTQ+ GIG S+ EQDR+LISFLQPLD SLGHHNSLEP+NS LNGSVSNA+IN SGMFHI
Sbjct: 301 LQTQASGIGFSEAEQDRHLISFLQPLDVSLGHHNSLEPINSVLNGSVSNANINCSGMFHI 360

Query: 361 ASADGGNEAPPQSLPSNSQ 380
           AS DG NEA P SLP + Q
Sbjct: 361 ASNDGCNEATPPSLPFHWQ 379

[Close]

BLAST of Sed0021220 vs. NCBI nr
Match: XP_022134617.1 (squamosa promoter-binding-like protein 13A [Momordica charantia] >XP_022134619.1 squamosa promoter-binding-like protein 13A [Momordica charantia] >XP_022134620.1 squamosa promoter-binding-like protein 13A [Momordica charantia] >XP_022134621.1 squamosa promoter-binding-like protein 13A [Momordica charantia] >XP_022134622.1 squamosa promoter-binding-like protein 13A [Momordica charantia])

HSP 1 Score: 619.8 bits (1597), Expect = 1.6e-173
Identity = 316/381 (82.94%), Postives = 335/381 (87.93%), Query Frame = 0


Query: 1   MDWNLKAPSWDFTQFEQDALKN-SYTIGASSSFVEHRTTSRDFSVDLKLGQVRDLGTKYL 60
           MDWNLK PSWDF Q EQDALKN + TI ASSSFVE RT S DFSVDLKLGQV DLGT+Y+
Sbjct: 1   MDWNLKTPSWDFAQLEQDALKNINTTIEASSSFVEQRTASGDFSVDLKLGQVGDLGTRYV 60

Query: 61  VNEPGVFKMTPSPSEPSKRARASGNGAQPLSCLVDGCISDLSNFRDYHRRHKVCELHSKT 120
           VNEPGVFKM PSPSEPSKRAR SGNGAQPLSCLVDGCISDLSN+RDYHRRHKVCELHSKT
Sbjct: 61  VNEPGVFKMAPSPSEPSKRARGSGNGAQPLSCLVDGCISDLSNYRDYHRRHKVCELHSKT 120

Query: 121 PQVTIGGLKQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQPESLSRTILSHYQ 180
           PQVTIGGLKQRFCQQCSRFHSL+EFDEGKRSCRKRLDGHNRRRRKPQPESLSR+ILSHYQ
Sbjct: 121 PQVTIGGLKQRFCQQCSRFHSLDEFDEGKRSCRKRLDGHNRRRRKPQPESLSRSILSHYQ 180

Query: 181 GSQLLPFATSYVYPSTTVANHSWGGGIANTETDARLHVQQEPTHFPDKHNMYLGSSSNDS 240
           GSQLLPF+TS VYPST V NHSW G  ANTET+ RL  Q EPTHFPDKHN+YLGSSSNDS
Sbjct: 181 GSQLLPFSTSCVYPSTIVMNHSWCGA-ANTETNVRLQGQPEPTHFPDKHNIYLGSSSNDS 240

Query: 241 IHKIRKQVSFLQSDNPKS-SVSQPLVKTIDFSENGGGWSKVLYERFTTPGHESDCALSLL 300
            +KI KQ+ FLQSDNP   SV QP VKT+ FSENGG  SK+LY+RFTTPGHESDCALSLL
Sbjct: 241 SYKIGKQLPFLQSDNPSEFSVCQPPVKTVAFSENGGDQSKMLYDRFTTPGHESDCALSLL 300

Query: 301 SSLQTQSYGIGLSQTEQDRNLISFLQPLDGSLGHHNSLEPVNSALNGSVSNADINYSGMF 360
           SSLQTQS  IGLSQ EQDRNLISFL PLD +LG+H+SL PV+S LNGSVSNADIN SGMF
Sbjct: 301 SSLQTQSSRIGLSQVEQDRNLISFLHPLDVNLGNHSSLNPVDSVLNGSVSNADINCSGMF 360

Query: 361 HIASADGGNEAPPQSLPSNSQ 380
           HIAS DGGNEAP  SLP + Q
Sbjct: 361 HIASDDGGNEAPTPSLPFHWQ 380

[Close]

BLAST of Sed0021220 vs. ExPASy Swiss-Prot
Match: B9DI20 (Squamosa promoter-binding-like protein 13A OS=Arabidopsis thaliana OX=3702 GN=SPL13A PE=1 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 7.4e-57
Identity = 144/323 (44.58%), Postives = 180/323 (55.73%), Query Frame = 0


Query: 1   MDWNLKAPSWDFTQFEQDALKNSYTIGASSSFVEHRTTSRDFSVDLKLGQVRDLGTKYLV 60
           MDWN K  S   + F+Q+   +   +  S SF     +  DFS DLKLG  R++G    V
Sbjct: 1   MDWNFKLSSGYLSGFDQE--PDLSPMDGSISFGGSSQSKADFSFDLKLG--RNIGNSSSV 60

Query: 61  -------------NEPGVFKMTPSPSEPSKRARASGNGAQPLS-CLVDGCISDLSNFRDY 120
                         +  + K   S S  SKR R +G G   +  CLVDGC SD SN R+Y
Sbjct: 61  FGDTEQVISLSKWKDSALAKPEGSRSSSSKRTRGNGVGTNQMPICLVDGCDSDFSNCREY 120

Query: 121 HRRHKVCELHSKTPQVTIGGLKQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQ 180
           H+RHKVC++HSKTP VTI G KQRFCQQCSRFH+LEEFDEGKRSCRKRLDGHNRRRRKPQ
Sbjct: 121 HKRHKVCDVHSKTPVVTINGHKQRFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRRRKPQ 180

Query: 181 PESLSR--TILSHYQGSQLLPFA-TSYVYPSTTVANHSWGGGIANTETDARLHVQQEPTH 240
           PE + R     + +QGS+LL F+  S+V+P+T+V N SWG  + +    A      +   
Sbjct: 181 PEHIGRPANFFTGFQGSKLLEFSGGSHVFPTTSVLNPSWGNSLVSVAVAANGSSYGQSQS 240

Query: 241 F-----PDKHN-MYLGSSSNDSIHKIRKQVSFLQSDNPKSSVSQPLVKTIDFSENGGGWS 300
           +     P K   M+  SSS +S   I KQ  FLQ +    + S                 
Sbjct: 241 YVVGSSPAKTGIMFPISSSPNSTRSIAKQFPFLQEEESSRTAS----------------- 300

[Close]

BLAST of Sed0021220 vs. ExPASy Swiss-Prot
Match: P0DI11 (Squamosa promoter-binding-like protein 13B OS=Arabidopsis thaliana OX=3702 GN=SPL13B PE=3 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 7.4e-57
Identity = 144/323 (44.58%), Postives = 180/323 (55.73%), Query Frame = 0


Query: 1   MDWNLKAPSWDFTQFEQDALKNSYTIGASSSFVEHRTTSRDFSVDLKLGQVRDLGTKYLV 60
           MDWN K  S   + F+Q+   +   +  S SF     +  DFS DLKLG  R++G    V
Sbjct: 1   MDWNFKLSSGYLSGFDQE--PDLSPMDGSISFGGSSQSKADFSFDLKLG--RNIGNSSSV 60

Query: 61  -------------NEPGVFKMTPSPSEPSKRARASGNGAQPLS-CLVDGCISDLSNFRDY 120
                         +  + K   S S  SKR R +G G   +  CLVDGC SD SN R+Y
Sbjct: 61  FGDTEQVISLSKWKDSALAKPEGSRSSSSKRTRGNGVGTNQMPICLVDGCDSDFSNCREY 120

Query: 121 HRRHKVCELHSKTPQVTIGGLKQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQ 180
           H+RHKVC++HSKTP VTI G KQRFCQQCSRFH+LEEFDEGKRSCRKRLDGHNRRRRKPQ
Sbjct: 121 HKRHKVCDVHSKTPVVTINGHKQRFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRRRKPQ 180

Query: 181 PESLSR--TILSHYQGSQLLPFA-TSYVYPSTTVANHSWGGGIANTETDARLHVQQEPTH 240
           PE + R     + +QGS+LL F+  S+V+P+T+V N SWG  + +    A      +   
Sbjct: 181 PEHIGRPANFFTGFQGSKLLEFSGGSHVFPTTSVLNPSWGNSLVSVAVAANGSSYGQSQS 240

Query: 241 F-----PDKHN-MYLGSSSNDSIHKIRKQVSFLQSDNPKSSVSQPLVKTIDFSENGGGWS 300
           +     P K   M+  SSS +S   I KQ  FLQ +    + S                 
Sbjct: 241 YVVGSSPAKTGIMFPISSSPNSTRSIAKQFPFLQEEESSRTAS----------------- 300

[Close]

BLAST of Sed0021220 vs. ExPASy Swiss-Prot
Match: Q49I55 (Teosinte glume architecture 1 OS=Zea mays OX=4577 GN=TGA1 PE=1 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 9.1e-47
Identity = 156/450 (34.67%), Postives = 213/450 (47.33%), Query Frame = 0


Query: 1   MDWNLKAP-SWDFTQFEQD---ALKNSYTIGASSSFVEHRTTSR-----------DFSVD 60
           MDW+L A  +WD  + EQD   A  +S    A+++     T SR           + SVD
Sbjct: 1   MDWDLNAAGAWDLAELEQDHAAAAPSSGGHAANAAAAGTGTESRPPAPGAAGAPAECSVD 60

Query: 61  LKLGQVRDLGTKYLVNEPGVFKM-TPSPSEPSKRARASGNGAQPL----SCLVDGCISDL 120
           LKLG + +        EPG  +    + +  +KR R +G G Q      SC VDGC +DL
Sbjct: 61  LKLGGMGEC-------EPGAARREREAAAGAAKRPRPAGPGGQQQQQCPSCAVDGCRADL 120

Query: 121 SNFRDYHRRHKVCELHSKTPQVTIGGLKQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNR 180
              RDYHRRHKVCE HSKTP V + G + RFCQQCSRFH L EFD  KRSCRKRLDGHNR
Sbjct: 121 GKCRDYHRRHKVCEAHSKTPVVVVAGREMRFCQQCSRFHLLAEFDADKRSCRKRLDGHNR 180

Query: 181 RRRKPQPESL-SRTILSHYQGSQLLPFATSYVYPSTTVANHSWGGGIANTETDARLHVQQ 240
           RRRKPQP+++ S + ++  QG++  PFA    +P       SW  G+  TE        +
Sbjct: 181 RRRKPQPDTMASASFIASQQGTRFSPFA----HPRLEA---SWPPGVMKTE--------E 240

Query: 241 EPTHFPDKHNMYLGSSSND-------------SIHKIRKQVSFLQSDN------------ 300
            P H    H + LGSSS+              +  K  ++  FLQ               
Sbjct: 241 SPYHI--THQIPLGSSSSSRQQHFVALGAATPAYAKEGRRFPFLQEGEISFATGVVLEPP 300

Query: 301 PKSSVSQPLVKTIDFSE-NGGGWSKVLYERFTTPGHESDCALSLLSSLQTQSYGIGLSQT 360
             +   QPL++T   SE +G G SK+  ++      +SDCALSLLS+    S GI +S+ 
Sbjct: 301 AAAPACQPLLRTGAPSESSGAGGSKMFSDQGLARVLDSDCALSLLSA-PANSSGIDVSRM 360

Query: 361 EQDRNLISFL-QPLDGSLGHHNSL------------------------EPVNSALNGSVS 379
            +    +    QP+   L   ++                         + +N+ L  + S
Sbjct: 361 VRPTEHVPMAQQPVVPGLQFGSASWFPRPQASTGGSFVPFCPAAVEGEQQLNAVLGPNDS 420

[Close]

BLAST of Sed0021220 vs. ExPASy Swiss-Prot
Match: Q49I57 (Teosinte glume architecture 1 OS=Zea mays OX=4577 GN=TGA1 PE=3 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 3.4e-46
Identity = 155/451 (34.37%), Postives = 213/451 (47.23%), Query Frame = 0


Query: 1   MDWNLKAP-SWDFTQFEQD---ALKNSYTIGASSSFVEHRTTSR-----------DFSVD 60
           MDW+L A  +WD  + E+D   A  +S    A+++     T SR           + SVD
Sbjct: 1   MDWDLNAAGAWDLAELERDHAAAAPSSGGHAANAAAAGTGTESRPPAPGAAGAPAECSVD 60

Query: 61  LKLGQVRDLGTKYLVNEPGVFKM-TPSPSEPSKRARASGNGAQPL-----SCLVDGCISD 120
           LKLG + +        EPG  +    + +  +KR R +G G Q       SC VDGC +D
Sbjct: 61  LKLGGMGEC-------EPGAARREREAAAGAAKRPRPAGPGGQQQQQQCPSCAVDGCRAD 120

Query: 121 LSNFRDYHRRHKVCELHSKTPQVTIGGLKQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHN 180
           L   RDYHRRHKVCE HSKTP V + G + RFCQQCSRFH L EFD  KRSCRKRLDGHN
Sbjct: 121 LGKCRDYHRRHKVCEAHSKTPVVVVAGREMRFCQQCSRFHLLAEFDADKRSCRKRLDGHN 180

Query: 181 RRRRKPQPESL-SRTILSHYQGSQLLPFATSYVYPSTTVANHSWGGGIANTETDARLHVQ 240
           RRRRKPQP+++ S + ++  QG++  PFA    +P       SW  G+  TE        
Sbjct: 181 RRRRKPQPDTMASASFIASQQGTRFSPFA----HPRLEA---SWPPGVMKTE-------- 240

Query: 241 QEPTHFPDKHNMYLGSSSND-------------SIHKIRKQVSFLQSDN----------- 300
           + P H    H + LGSSS+              +  K  ++  FLQ              
Sbjct: 241 ESPYHI--THQIPLGSSSSSRQQHFVALGAATPAYAKEGRRFPFLQEGEISFATGVVLEP 300

Query: 301 -PKSSVSQPLVKTIDFSE-NGGGWSKVLYERFTTPGHESDCALSLLSSLQTQSYGIGLSQ 360
              +   QPL++T   SE +G G SK+  ++      +SDCALSLLS+    S GI +S+
Sbjct: 301 PAAAPACQPLLRTGAPSESSGAGGSKMFSDQGLARVLDSDCALSLLSA-PANSSGIDVSR 360

Query: 361 TEQDRNLISFL-QPLDGSLGHHNSL------------------------EPVNSALNGSV 379
             +    +    QP+   L   ++                         + +N+ L  + 
Sbjct: 361 MVRPTEHVPMAQQPVVPGLQFGSASWFPRPQASTGGSFVPSCPAAVEGEQQLNAVLGPND 420

[Close]

BLAST of Sed0021220 vs. ExPASy Swiss-Prot
Match: Q6YZE8 (Squamosa promoter-binding-like protein 16 OS=Oryza sativa subsp. japonica OX=39947 GN=SPL16 PE=2 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.3e-45
Identity = 160/475 (33.68%), Postives = 217/475 (45.68%), Query Frame = 0


Query: 1   MDWNLKAP---SWDFTQFEQDALKNS------YTIGASSSFVEHRTTS-----RDFSVDL 60
           M+W+LK P   SW+      D L+NS        + +SS+ V     +     ++ SVDL
Sbjct: 1   MEWDLKMPPAASWELA----DELENSGGGGVPAAVSSSSAAVGGGVNAGGGGRQECSVDL 60

Query: 61  KLGQVRDLG------TKYLVNEPGVFK---------MTPSPSEPSKRAR--ASGNGAQPL 120
           KLG + + G         +  EP   K            + S P+KR R  A+    Q  
Sbjct: 61  KLGGLGEFGGGGAQPRVAVAGEPAKGKGPAAAATGAAAAASSAPAKRPRGAAAAGQQQCP 120

Query: 121 SCLVDGCISDLSNFRDYHRRHKVCELHSKTPQVTIGGLKQRFCQQCSRFHSLEEFDEGKR 180
           SC VDGC  DLS  RDYHRRHKVCE HSKTP V + G + RFCQQCSRFH L+EFDE KR
Sbjct: 121 SCAVDGCKEDLSKCRDYHRRHKVCEAHSKTPLVVVSGREMRFCQQCSRFHLLQEFDEAKR 180

Query: 181 SCRKRLDGHNRRRRKPQPESL-SRTILSHYQGSQLLPFATSYVYPSTTVANHSWGGGIAN 240
           SCRKRLDGHNRRRRKPQP+ + S + L+  QG++  PFAT            SW G I  
Sbjct: 181 SCRKRLDGHNRRRRKPQPDPMNSASYLASQQGARFSPFATPR-------PEASWTGMIKT 240

Query: 241 TETDARLHVQQEPTHFPDKHNMYLGSSSNDSIHKIRKQVSFLQSDN-------------- 300
            E+    H  Q P     +   ++GS+S+       ++  FLQ                 
Sbjct: 241 EESPYYTH-HQIPLGISSRQQHFVGSTSDGG-----RRFPFLQEGEISFGTGAGAGGVPM 300

Query: 301 ------PKSSVSQPLVKTI-----DFSENGGGWSKVLYERFTTPGHESDCALSLLSS-LQ 360
                   +SV QPL+KT+          G G  K+  +   T   +SDCALSLLS+   
Sbjct: 301 DQAAAAAAASVCQPLLKTVAPPPPPHGGGGSGGGKMFSDGGLTQVLDSDCALSLLSAPAN 360

Query: 361 TQSYGIGLSQ-TEQDRNLISFLQPLDGSL---------------GHHNSL---------- 380
           + +  +G  +   Q    I   QPL   L                HH +           
Sbjct: 361 STAIDVGGGRVVVQPTEHIPMAQPLISGLQFGGGGGSSAWFAARPHHQAATGAAATAVVV 420

[Close]

BLAST of Sed0021220 vs. ExPASy TrEMBL
Match: A0A0A0LNV8 (SBP-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G001450 PE=4 SV=1)

HSP 1 Score: 644.0 bits (1660), Expect = 3.8e-181
Identity = 317/379 (83.64%), Postives = 342/379 (90.24%), Query Frame = 0


Query: 1   MDWNLKAPSWDFTQFEQDALKNSYTIGASSSFVEHRTTSRDFSVDLKLGQVRDLGTKYLV 60
           MDWNLK PSWDFTQ EQDALKN  +IGASS+FVEH  TS DF+VDLKLGQV +LGTKY+V
Sbjct: 1   MDWNLKTPSWDFTQLEQDALKNINSIGASSNFVEHIATSGDFTVDLKLGQVSNLGTKYVV 60

Query: 61  NEPGVFKMTPSPSEPSKRARASGNGAQPLSCLVDGCISDLSNFRDYHRRHKVCELHSKTP 120
           NEPGVFKM PSPSEPSKRAR SGNGAQPLSCLVDGC+SDLSN+RDYHRRHKVCELHSKTP
Sbjct: 61  NEPGVFKMAPSPSEPSKRARGSGNGAQPLSCLVDGCVSDLSNYRDYHRRHKVCELHSKTP 120

Query: 121 QVTIGGLKQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQPESLSRTILSHYQG 180
           QVTIGGLKQRFCQQCSRFHSL+EFDEGKRSCRKRLDGHNRRRRKPQ +SLSR+ILSHYQG
Sbjct: 121 QVTIGGLKQRFCQQCSRFHSLDEFDEGKRSCRKRLDGHNRRRRKPQSDSLSRSILSHYQG 180

Query: 181 SQLLPFATSYVYPSTTVANHSWGGGIANTETDARLHVQQEPTHFPDKHNMYLGSSSNDSI 240
           SQLLPF++S+VYPST V NHSW     NTE DARLHVQQEPTHFPDKHN+YLGSSSNDS+
Sbjct: 181 SQLLPFSSSHVYPSTLVMNHSWRDLANNTEIDARLHVQQEPTHFPDKHNIYLGSSSNDSV 240

Query: 241 HKIRKQVSFLQSDNPKSSVSQPLVKTIDFSENGGGWSKVLYERFTTPGHESDCALSLLSS 300
           HKI KQV+F+QSDNP+SSV QPLVKTIDFSEN  G SK+LY+ F TPGHESDCALSLLSS
Sbjct: 241 HKIGKQVTFMQSDNPESSVGQPLVKTIDFSENEIGRSKMLYDGFKTPGHESDCALSLLSS 300

Query: 301 LQTQSYGIGLSQTEQDRNLISFLQPLDGSLGHHNSLEPVNSALNGSVSNADINYSGMFHI 360
           LQTQ+ GIG S+ EQDR+LISFLQPLD SLGHHNSLEP+NS LNGSVSNADIN SGMFHI
Sbjct: 301 LQTQASGIGFSEAEQDRHLISFLQPLDVSLGHHNSLEPINSVLNGSVSNADINCSGMFHI 360

Query: 361 ASADGGNEAPPQSLPSNSQ 380
           AS DG NEAPP SLP + Q
Sbjct: 361 ASNDGCNEAPPPSLPFHWQ 379

[Close]

BLAST of Sed0021220 vs. ExPASy TrEMBL
Match: A0A1S3CLF0 (squamosa promoter-binding-like protein 13A OS=Cucumis melo OX=3656 GN=LOC103502309 PE=4 SV=1)

HSP 1 Score: 635.6 bits (1638), Expect = 1.4e-178
Identity = 314/379 (82.85%), Postives = 340/379 (89.71%), Query Frame = 0


Query: 1   MDWNLKAPSWDFTQFEQDALKNSYTIGASSSFVEHRTTSRDFSVDLKLGQVRDLGTKYLV 60
           MDWNLK PSWDFTQ EQDALKN  TIGASS+FVEH TTS DF+VDLKLGQV +LGTKY+V
Sbjct: 1   MDWNLKTPSWDFTQLEQDALKNINTIGASSNFVEHITTSGDFTVDLKLGQVSNLGTKYVV 60

Query: 61  NEPGVFKMTPSPSEPSKRARASGNGAQPLSCLVDGCISDLSNFRDYHRRHKVCELHSKTP 120
           NEPGVFK+TPSPSEPSKRAR SGNGAQP SCLVDGC+SDLSN+RDYHRRHKVCELHSKTP
Sbjct: 61  NEPGVFKVTPSPSEPSKRARGSGNGAQPSSCLVDGCVSDLSNYRDYHRRHKVCELHSKTP 120

Query: 121 QVTIGGLKQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQPESLSRTILSHYQG 180
           QVTIGGL QRFCQQCSRFHSL+EFDEGKRSCRKRLDGHNRRRRKPQ +SLSR+ILSHYQG
Sbjct: 121 QVTIGGLTQRFCQQCSRFHSLDEFDEGKRSCRKRLDGHNRRRRKPQSDSLSRSILSHYQG 180

Query: 181 SQLLPFATSYVYPSTTVANHSWGGGIANTETDARLHVQQEPTHFPDKHNMYLGSSSNDSI 240
           SQL PF++S+VYPST V NHSW     NTE DARLHVQQEPTHFPDKHN+YLGSSSNDS+
Sbjct: 181 SQLSPFSSSHVYPSTLVMNHSWRDLANNTEIDARLHVQQEPTHFPDKHNIYLGSSSNDSV 240

Query: 241 HKIRKQVSFLQSDNPKSSVSQPLVKTIDFSENGGGWSKVLYERFTTPGHESDCALSLLSS 300
           HKI KQV+F+QSDNP+SSV QPLVKTIDFSEN    SK+LY+RF TPGHESDCALSLLSS
Sbjct: 241 HKIGKQVTFMQSDNPESSVGQPLVKTIDFSENEVCRSKMLYDRFKTPGHESDCALSLLSS 300

Query: 301 LQTQSYGIGLSQTEQDRNLISFLQPLDGSLGHHNSLEPVNSALNGSVSNADINYSGMFHI 360
           LQTQ+ GIG S+ EQDR+LISFLQPLD SLGHHNSLEP+NS LNGSVSNA+IN SGMFHI
Sbjct: 301 LQTQASGIGFSEAEQDRHLISFLQPLDVSLGHHNSLEPINSVLNGSVSNANINCSGMFHI 360

Query: 361 ASADGGNEAPPQSLPSNSQ 380
           AS DG NEA P SLP + Q
Sbjct: 361 ASNDGCNEATPPSLPFHWQ 379

[Close]

BLAST of Sed0021220 vs. ExPASy TrEMBL
Match: A0A5D3BGR7 (Squamosa promoter-binding-like protein 13A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00440 PE=4 SV=1)

HSP 1 Score: 635.6 bits (1638), Expect = 1.4e-178
Identity = 314/379 (82.85%), Postives = 340/379 (89.71%), Query Frame = 0


Query: 1   MDWNLKAPSWDFTQFEQDALKNSYTIGASSSFVEHRTTSRDFSVDLKLGQVRDLGTKYLV 60
           MDWNLK PSWDFTQ EQDALKN  TIGASS+FVEH TTS DF+VDLKLGQV +LGTKY+V
Sbjct: 1   MDWNLKTPSWDFTQLEQDALKNINTIGASSNFVEHITTSGDFTVDLKLGQVSNLGTKYVV 60

Query: 61  NEPGVFKMTPSPSEPSKRARASGNGAQPLSCLVDGCISDLSNFRDYHRRHKVCELHSKTP 120
           NEPGVFK+TPSPSEPSKRAR SGNGAQP SCLVDGC+SDLSN+RDYHRRHKVCELHSKTP
Sbjct: 61  NEPGVFKVTPSPSEPSKRARGSGNGAQPSSCLVDGCVSDLSNYRDYHRRHKVCELHSKTP 120

Query: 121 QVTIGGLKQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQPESLSRTILSHYQG 180
           QVTIGGL QRFCQQCSRFHSL+EFDEGKRSCRKRLDGHNRRRRKPQ +SLSR+ILSHYQG
Sbjct: 121 QVTIGGLTQRFCQQCSRFHSLDEFDEGKRSCRKRLDGHNRRRRKPQSDSLSRSILSHYQG 180

Query: 181 SQLLPFATSYVYPSTTVANHSWGGGIANTETDARLHVQQEPTHFPDKHNMYLGSSSNDSI 240
           SQL PF++S+VYPST V NHSW     NTE DARLHVQQEPTHFPDKHN+YLGSSSNDS+
Sbjct: 181 SQLSPFSSSHVYPSTLVMNHSWRDLANNTEIDARLHVQQEPTHFPDKHNIYLGSSSNDSV 240

Query: 241 HKIRKQVSFLQSDNPKSSVSQPLVKTIDFSENGGGWSKVLYERFTTPGHESDCALSLLSS 300
           HKI KQV+F+QSDNP+SSV QPLVKTIDFSEN    SK+LY+RF TPGHESDCALSLLSS
Sbjct: 241 HKIGKQVTFMQSDNPESSVGQPLVKTIDFSENEVCRSKMLYDRFKTPGHESDCALSLLSS 300

Query: 301 LQTQSYGIGLSQTEQDRNLISFLQPLDGSLGHHNSLEPVNSALNGSVSNADINYSGMFHI 360
           LQTQ+ GIG S+ EQDR+LISFLQPLD SLGHHNSLEP+NS LNGSVSNA+IN SGMFHI
Sbjct: 301 LQTQASGIGFSEAEQDRHLISFLQPLDVSLGHHNSLEPINSVLNGSVSNANINCSGMFHI 360

Query: 361 ASADGGNEAPPQSLPSNSQ 380
           AS DG NEA P SLP + Q
Sbjct: 361 ASNDGCNEATPPSLPFHWQ 379

[Close]

BLAST of Sed0021220 vs. ExPASy TrEMBL
Match: A0A5A7UPH5 (Squamosa promoter-binding-like protein 13A OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G00450 PE=4 SV=1)

HSP 1 Score: 632.5 bits (1630), Expect = 1.1e-177
Identity = 313/379 (82.59%), Postives = 338/379 (89.18%), Query Frame = 0


Query: 1   MDWNLKAPSWDFTQFEQDALKNSYTIGASSSFVEHRTTSRDFSVDLKLGQVRDLGTKYLV 60
           MDWNLK PSWDFTQ EQDALKN  TIGASS+FVEH TTS DF+VDLKLGQV +LGTKY+V
Sbjct: 1   MDWNLKTPSWDFTQLEQDALKNINTIGASSNFVEHITTSGDFTVDLKLGQVSNLGTKYVV 60

Query: 61  NEPGVFKMTPSPSEPSKRARASGNGAQPLSCLVDGCISDLSNFRDYHRRHKVCELHSKTP 120
           NEPGVFK TPSPSEPSKRAR SGNGAQP SCLVDGC+SDLSN+RDYHRRHKVCELHSKTP
Sbjct: 61  NEPGVFKATPSPSEPSKRARGSGNGAQPSSCLVDGCVSDLSNYRDYHRRHKVCELHSKTP 120

Query: 121 QVTIGGLKQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQPESLSRTILSHYQG 180
           QVTIGGL QRFCQQCSRFHSL+EFDEGKRSCRKRLDGHNRRRRKPQ +SLSR+ILSHYQG
Sbjct: 121 QVTIGGLTQRFCQQCSRFHSLDEFDEGKRSCRKRLDGHNRRRRKPQSDSLSRSILSHYQG 180

Query: 181 SQLLPFATSYVYPSTTVANHSWGGGIANTETDARLHVQQEPTHFPDKHNMYLGSSSNDSI 240
           SQL PF++S+VYPST V NHSW     NTE DARLHVQQEPTHFPDKHN+YLGSSSNDS+
Sbjct: 181 SQLSPFSSSHVYPSTLVMNHSWRDLANNTEIDARLHVQQEPTHFPDKHNIYLGSSSNDSV 240

Query: 241 HKIRKQVSFLQSDNPKSSVSQPLVKTIDFSENGGGWSKVLYERFTTPGHESDCALSLLSS 300
           HKI KQV+F+QSDNP+ SV QPLVKTIDFSEN    SK+LY+RF TPGHESDCALSLLSS
Sbjct: 241 HKIGKQVTFMQSDNPEFSVGQPLVKTIDFSENEVCRSKMLYDRFKTPGHESDCALSLLSS 300

Query: 301 LQTQSYGIGLSQTEQDRNLISFLQPLDGSLGHHNSLEPVNSALNGSVSNADINYSGMFHI 360
           LQTQ+ GIG S+ EQDR+LISFLQPLD SLGHHNSLEP+NS LNGSVSNA+IN SGMFHI
Sbjct: 301 LQTQASGIGFSEAEQDRHLISFLQPLDVSLGHHNSLEPINSVLNGSVSNANINCSGMFHI 360

Query: 361 ASADGGNEAPPQSLPSNSQ 380
           AS DG NEA P SLP + Q
Sbjct: 361 ASNDGCNEATPPSLPFHWQ 379

[Close]

BLAST of Sed0021220 vs. ExPASy TrEMBL
Match: A0A6J1C035 (squamosa promoter-binding-like protein 13A OS=Momordica charantia OX=3673 GN=LOC111006844 PE=4 SV=1)

HSP 1 Score: 619.8 bits (1597), Expect = 7.7e-174
Identity = 316/381 (82.94%), Postives = 335/381 (87.93%), Query Frame = 0


Query: 1   MDWNLKAPSWDFTQFEQDALKN-SYTIGASSSFVEHRTTSRDFSVDLKLGQVRDLGTKYL 60
           MDWNLK PSWDF Q EQDALKN + TI ASSSFVE RT S DFSVDLKLGQV DLGT+Y+
Sbjct: 1   MDWNLKTPSWDFAQLEQDALKNINTTIEASSSFVEQRTASGDFSVDLKLGQVGDLGTRYV 60

Query: 61  VNEPGVFKMTPSPSEPSKRARASGNGAQPLSCLVDGCISDLSNFRDYHRRHKVCELHSKT 120
           VNEPGVFKM PSPSEPSKRAR SGNGAQPLSCLVDGCISDLSN+RDYHRRHKVCELHSKT
Sbjct: 61  VNEPGVFKMAPSPSEPSKRARGSGNGAQPLSCLVDGCISDLSNYRDYHRRHKVCELHSKT 120

Query: 121 PQVTIGGLKQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQPESLSRTILSHYQ 180
           PQVTIGGLKQRFCQQCSRFHSL+EFDEGKRSCRKRLDGHNRRRRKPQPESLSR+ILSHYQ
Sbjct: 121 PQVTIGGLKQRFCQQCSRFHSLDEFDEGKRSCRKRLDGHNRRRRKPQPESLSRSILSHYQ 180

Query: 181 GSQLLPFATSYVYPSTTVANHSWGGGIANTETDARLHVQQEPTHFPDKHNMYLGSSSNDS 240
           GSQLLPF+TS VYPST V NHSW G  ANTET+ RL  Q EPTHFPDKHN+YLGSSSNDS
Sbjct: 181 GSQLLPFSTSCVYPSTIVMNHSWCGA-ANTETNVRLQGQPEPTHFPDKHNIYLGSSSNDS 240

Query: 241 IHKIRKQVSFLQSDNPKS-SVSQPLVKTIDFSENGGGWSKVLYERFTTPGHESDCALSLL 300
            +KI KQ+ FLQSDNP   SV QP VKT+ FSENGG  SK+LY+RFTTPGHESDCALSLL
Sbjct: 241 SYKIGKQLPFLQSDNPSEFSVCQPPVKTVAFSENGGDQSKMLYDRFTTPGHESDCALSLL 300

Query: 301 SSLQTQSYGIGLSQTEQDRNLISFLQPLDGSLGHHNSLEPVNSALNGSVSNADINYSGMF 360
           SSLQTQS  IGLSQ EQDRNLISFL PLD +LG+H+SL PV+S LNGSVSNADIN SGMF
Sbjct: 301 SSLQTQSSRIGLSQVEQDRNLISFLHPLDVNLGNHSSLNPVDSVLNGSVSNADINCSGMF 360

Query: 361 HIASADGGNEAPPQSLPSNSQ 380
           HIAS DGGNEAP  SLP + Q
Sbjct: 361 HIASDDGGNEAPTPSLPFHWQ 380

[Close]

BLAST of Sed0021220 vs. TAIR 10
Match: AT5G50570.1 (Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein )

HSP 1 Score: 222.6 bits (566), Expect = 5.3e-58
Identity = 144/323 (44.58%), Postives = 180/323 (55.73%), Query Frame = 0


Query: 1   MDWNLKAPSWDFTQFEQDALKNSYTIGASSSFVEHRTTSRDFSVDLKLGQVRDLGTKYLV 60
           MDWN K  S   + F+Q+   +   +  S SF     +  DFS DLKLG  R++G    V
Sbjct: 1   MDWNFKLSSGYLSGFDQE--PDLSPMDGSISFGGSSQSKADFSFDLKLG--RNIGNSSSV 60

Query: 61  -------------NEPGVFKMTPSPSEPSKRARASGNGAQPLS-CLVDGCISDLSNFRDY 120
                         +  + K   S S  SKR R +G G   +  CLVDGC SD SN R+Y
Sbjct: 61  FGDTEQVISLSKWKDSALAKPEGSRSSSSKRTRGNGVGTNQMPICLVDGCDSDFSNCREY 120

Query: 121 HRRHKVCELHSKTPQVTIGGLKQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQ 180
           H+RHKVC++HSKTP VTI G KQRFCQQCSRFH+LEEFDEGKRSCRKRLDGHNRRRRKPQ
Sbjct: 121 HKRHKVCDVHSKTPVVTINGHKQRFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRRRKPQ 180

Query: 181 PESLSR--TILSHYQGSQLLPFA-TSYVYPSTTVANHSWGGGIANTETDARLHVQQEPTH 240
           PE + R     + +QGS+LL F+  S+V+P+T+V N SWG  + +    A      +   
Sbjct: 181 PEHIGRPANFFTGFQGSKLLEFSGGSHVFPTTSVLNPSWGNSLVSVAVAANGSSYGQSQS 240

Query: 241 F-----PDKHN-MYLGSSSNDSIHKIRKQVSFLQSDNPKSSVSQPLVKTIDFSENGGGWS 300
           +     P K   M+  SSS +S   I KQ  FLQ +    + S                 
Sbjct: 241 YVVGSSPAKTGIMFPISSSPNSTRSIAKQFPFLQEEESSRTAS----------------- 300

[Close]

BLAST of Sed0021220 vs. TAIR 10
Match: AT5G50670.1 (Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein )

HSP 1 Score: 222.6 bits (566), Expect = 5.3e-58
Identity = 144/323 (44.58%), Postives = 180/323 (55.73%), Query Frame = 0


Query: 1   MDWNLKAPSWDFTQFEQDALKNSYTIGASSSFVEHRTTSRDFSVDLKLGQVRDLGTKYLV 60
           MDWN K  S   + F+Q+   +   +  S SF     +  DFS DLKLG  R++G    V
Sbjct: 1   MDWNFKLSSGYLSGFDQE--PDLSPMDGSISFGGSSQSKADFSFDLKLG--RNIGNSSSV 60

Query: 61  -------------NEPGVFKMTPSPSEPSKRARASGNGAQPLS-CLVDGCISDLSNFRDY 120
                         +  + K   S S  SKR R +G G   +  CLVDGC SD SN R+Y
Sbjct: 61  FGDTEQVISLSKWKDSALAKPEGSRSSSSKRTRGNGVGTNQMPICLVDGCDSDFSNCREY 120

Query: 121 HRRHKVCELHSKTPQVTIGGLKQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQ 180
           H+RHKVC++HSKTP VTI G KQRFCQQCSRFH+LEEFDEGKRSCRKRLDGHNRRRRKPQ
Sbjct: 121 HKRHKVCDVHSKTPVVTINGHKQRFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRRRKPQ 180

Query: 181 PESLSR--TILSHYQGSQLLPFA-TSYVYPSTTVANHSWGGGIANTETDARLHVQQEPTH 240
           PE + R     + +QGS+LL F+  S+V+P+T+V N SWG  + +    A      +   
Sbjct: 181 PEHIGRPANFFTGFQGSKLLEFSGGSHVFPTTSVLNPSWGNSLVSVAVAANGSSYGQSQS 240

Query: 241 F-----PDKHN-MYLGSSSNDSIHKIRKQVSFLQSDNPKSSVSQPLVKTIDFSENGGGWS 300
           +     P K   M+  SSS +S   I KQ  FLQ +    + S                 
Sbjct: 241 YVVGSSPAKTGIMFPISSSPNSTRSIAKQFPFLQEEESSRTAS----------------- 300

[Close]

BLAST of Sed0021220 vs. TAIR 10
Match: AT5G50570.2 (Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein )

HSP 1 Score: 222.6 bits (566), Expect = 5.3e-58
Identity = 144/323 (44.58%), Postives = 180/323 (55.73%), Query Frame = 0


Query: 1   MDWNLKAPSWDFTQFEQDALKNSYTIGASSSFVEHRTTSRDFSVDLKLGQVRDLGTKYLV 60
           MDWN K  S   + F+Q+   +   +  S SF     +  DFS DLKLG  R++G    V
Sbjct: 1   MDWNFKLSSGYLSGFDQE--PDLSPMDGSISFGGSSQSKADFSFDLKLG--RNIGNSSSV 60

Query: 61  -------------NEPGVFKMTPSPSEPSKRARASGNGAQPLS-CLVDGCISDLSNFRDY 120
                         +  + K   S S  SKR R +G G   +  CLVDGC SD SN R+Y
Sbjct: 61  FGDTEQVISLSKWKDSALAKPEGSRSSSSKRTRGNGVGTNQMPICLVDGCDSDFSNCREY 120

Query: 121 HRRHKVCELHSKTPQVTIGGLKQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQ 180
           H+RHKVC++HSKTP VTI G KQRFCQQCSRFH+LEEFDEGKRSCRKRLDGHNRRRRKPQ
Sbjct: 121 HKRHKVCDVHSKTPVVTINGHKQRFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRRRKPQ 180

Query: 181 PESLSR--TILSHYQGSQLLPFA-TSYVYPSTTVANHSWGGGIANTETDARLHVQQEPTH 240
           PE + R     + +QGS+LL F+  S+V+P+T+V N SWG  + +    A      +   
Sbjct: 181 PEHIGRPANFFTGFQGSKLLEFSGGSHVFPTTSVLNPSWGNSLVSVAVAANGSSYGQSQS 240

Query: 241 F-----PDKHN-MYLGSSSNDSIHKIRKQVSFLQSDNPKSSVSQPLVKTIDFSENGGGWS 300
           +     P K   M+  SSS +S   I KQ  FLQ +    + S                 
Sbjct: 241 YVVGSSPAKTGIMFPISSSPNSTRSIAKQFPFLQEEESSRTAS----------------- 300

[Close]

BLAST of Sed0021220 vs. TAIR 10
Match: AT1G76580.1 (Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein )

HSP 1 Score: 134.4 bits (337), Expect = 1.9e-31
Identity = 74/175 (42.29%), Postives = 95/175 (54.29%), Query Frame = 0


Query: 2   DWNLKAPSWDFTQFEQDALKNSYTIGASSSFVEHRTTSRDFSVDLKLGQVRDLGTKYLVN 61
           DW +    WD  +FE   L+     G S       +  +   ++L  G     GT   + 
Sbjct: 8   DWQMNRWKWDGQRFEAIELQ-----GESLQL----SNKKGLDLNLPCGFNDVEGTPVDLT 67

Query: 62  EPGVFKMTPSPSEPSKRARASGNGAQPLSCLVDGCISDLSNFRDYHRRHKVCELHSKTPQ 121
            P     + SP          G G     C VD C  DLS  +DYHRRHKVCE+HSK  +
Sbjct: 68  RPSKKVRSGSPGS------GGGGGGNYPKCQVDNCKEDLSIAKDYHRRHKVCEVHSKATK 127

Query: 122 VTIGGLKQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQPESLSRTILS 177
             +G   QRFCQQCSRFH L EFDEGKRSCR+RLDGHNRRRRK QP++++  +++
Sbjct: 128 ALVGKQMQRFCQQCSRFHLLSEFDEGKRSCRRRLDGHNRRRRKTQPDAITSQVVA 167

[Close]

BLAST of Sed0021220 vs. TAIR 10
Match: AT1G20980.1 (squamosa promoter binding protein-like 14 )

HSP 1 Score: 133.3 bits (334), Expect = 4.2e-31
Identity = 74/177 (41.81%), Postives = 97/177 (54.80%), Query Frame = 0


Query: 2   DWNLKAPSWDFTQFEQDALKNSYTIGASSSFVEHRTTSRDFSVDLKLGQVRDLGTKYLVN 61
           +WN K   WD  +FE             +  V+      D ++  + G+ R L       
Sbjct: 42  EWNSKMWDWDSRRFE-------------AKPVDVEVQEFDLTLRNRSGEERGLDLNLGSG 101

Query: 62  EPGVFKMTPSPS--EPSKRARASGNGAQPLSCLVDGCISDLSNFRDYHRRHKVCELHSKT 121
              V + T +     P+K+ R+   G     C VD C  DLS+ +DYHRRHKVCE+HSK 
Sbjct: 102 LTAVEETTTTTQNVRPNKKVRSGSPGGNYPMCQVDNCTEDLSHAKDYHRRHKVCEVHSKA 161

Query: 122 PQVTIGGLKQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRK-PQPESLSRTIL 176
            +  +G   QRFCQQCSRFH L EFDEGKRSCR+RL GHNRRRRK  QPE ++  ++
Sbjct: 162 TKALVGKQMQRFCQQCSRFHLLSEFDEGKRSCRRRLAGHNRRRRKTTQPEEVASGVV 205

The following BLAST results are available for this feature:

BLAST of Sed0021220 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038879374.1	4.6e-181	83.64	squamosa promoter-binding-like protein 13A [Benincasa hispida] >XP_038879375.1 s...	[more]
XP_031740302.1	7.9e-181	83.64	squamosa promoter-binding-like protein 13A [Cucumis sativus] >XP_031740305.1 squ...	[more]
XP_008464414.1	2.8e-178	82.85	PREDICTED: squamosa promoter-binding-like protein 13A [Cucumis melo] >XP_0084644...	[more]
KAA0057762.1	2.4e-177	82.59	squamosa promoter-binding-like protein 13A [Cucumis melo var. makuwa]	[more]
XP_022134617.1	1.6e-173	82.94	squamosa promoter-binding-like protein 13A [Momordica charantia] >XP_022134619.1...	[more]

BLAST of Sed0021220 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B9DI20	7.4e-57	44.58	Squamosa promoter-binding-like protein 13A OS=Arabidopsis thaliana OX=3702 GN=SP...	[more]
P0DI11	7.4e-57	44.58	Squamosa promoter-binding-like protein 13B OS=Arabidopsis thaliana OX=3702 GN=SP...	[more]
Q49I55	9.1e-47	34.67	Teosinte glume architecture 1 OS=Zea mays OX=4577 GN=TGA1 PE=1 SV=1	[more]
Q49I57	3.4e-46	34.37	Teosinte glume architecture 1 OS=Zea mays OX=4577 GN=TGA1 PE=3 SV=1	[more]
Q6YZE8	1.3e-45	33.68	Squamosa promoter-binding-like protein 16 OS=Oryza sativa subsp. japonica OX=399...	[more]

BLAST of Sed0021220 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LNV8	3.8e-181	83.64	SBP-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G001450 PE...	[more]
A0A1S3CLF0	1.4e-178	82.85	squamosa promoter-binding-like protein 13A OS=Cucumis melo OX=3656 GN=LOC1035023...	[more]
A0A5D3BGR7	1.4e-178	82.85	Squamosa promoter-binding-like protein 13A OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A5A7UPH5	1.1e-177	82.59	Squamosa promoter-binding-like protein 13A OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A6J1C035	7.7e-174	82.94	squamosa promoter-binding-like protein 13A OS=Momordica charantia OX=3673 GN=LOC...	[more]

BLAST of Sed0021220 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G50570.1	5.3e-58	44.58	Squamosa promoter-binding protein-like (SBP domain) transcription factor family ...	[more]
AT5G50670.1	5.3e-58	44.58	Squamosa promoter-binding protein-like (SBP domain) transcription factor family ...	[more]
AT5G50570.2	5.3e-58	44.58	Squamosa promoter-binding protein-like (SBP domain) transcription factor family ...	[more]
AT1G76580.1	1.9e-31	42.29	Squamosa promoter-binding protein-like (SBP domain) transcription factor family ...	[more]
AT1G20980.1	4.2e-31	41.81	squamosa promoter binding protein-like 14	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004333	SBP domain	PFAM	PF03110	SBP	coord: 91..164 e-value: 5.6E-31 score: 106.7
IPR004333	SBP domain	PROSITE	PS51141	ZF_SBP	coord: 88..165 score: 31.752474
IPR036893	SBP domain superfamily	GENE3D	4.10.1100.10		coord: 81..152 e-value: 1.5E-34 score: 119.9
IPR036893	SBP domain superfamily	SUPERFAMILY	103612	SBT domain	coord: 89..170
IPR044817	Squamosa promoter-binding-like protein	PANTHER	PTHR31251	SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4	coord: 5..377
None	No IPR available	PANTHER	PTHR31251:SF144	SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 13A ISOFORM X1	coord: 5..377

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0021220.1	Sed0021220.1	mRNA
Sed0021220.2	Sed0021220.2	mRNA
Sed0021220.3	Sed0021220.3	mRNA
Sed0021220.4	Sed0021220.4	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding