Sed0021208 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSexonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAAGCAAAGCACCAACCTGGGCTGATCAGTGGGGATCGGGCAATTATGGCGTCGAAGACGACGACAATAACAAGGTGGTGGTGGCAAAGAAAGGGAGCGGCGGGAAAGCCAATATTAGCAAGAAGATGACTGAGGTAAAGGCTGCAGCCTCAGCTGGGTTTGTGAAGGTAAAGGCTGTTACAGTTGTGGGGGCTCAAAAAGTGAAATCTGGAACTTCAGTAGGCATCAAATGGATCAAGAAAAAGGTTTCCAAATGA ATGGGAAGCAAAGCACCAACCTGGGCTGATCAGTGGGGATCGGGCAATTATGGCGTCGAAGACGACGACAATAACAAGGTGGTGGTGGCAAAGAAAGGGAGCGGCGGGAAAGCCAATATTAGCAAGAAGATGACTGAGGTAAAGGCTGCAGCCTCAGCTGGGTTTGTGAAGGTAAAGGCTGTTACAGTTGTGGGGGCTCAAAAAGTGAAATCTGGAACTTCAGTAGGCATCAAATGGATCAAGAAAAAGGTTTCCAAATGA ATGGGAAGCAAAGCACCAACCTGGGCTGATCAGTGGGGATCGGGCAATTATGGCGTCGAAGACGACGACAATAACAAGGTGGTGGTGGCAAAGAAAGGGAGCGGCGGGAAAGCCAATATTAGCAAGAAGATGACTGAGGTAAAGGCTGCAGCCTCAGCTGGGTTTGTGAAGGTAAAGGCTGTTACAGTTGTGGGGGCTCAAAAAGTGAAATCTGGAACTTCAGTAGGCATCAAATGGATCAAGAAAAAGGTTTCCAAATGA MGSKAPTWADQWGSGNYGVEDDDNNKVVVAKKGSGGKANISKKMTEVKAAASAGFVKVKAVTVVGAQKVKSGTSVGIKWIKKKVSK Homology
BLAST of Sed0021208 vs. NCBI nr
Match: KAA0059574.1 (hypothetical protein E6C27_scaffold4837G00020 [Cucumis melo var. makuwa] >KAE8652289.1 hypothetical protein Csa_022099 [Cucumis sativus] >TYK24204.1 hypothetical protein E5676_scaffold27G00040 [Cucumis melo var. makuwa]) HSP 1 Score: 124.0 bits (310), Expect = 6.2e-25 Identity = 70/90 (77.78%), Postives = 72/90 (80.00%), Query Frame = 0
BLAST of Sed0021208 vs. NCBI nr
Match: KAG6604861.1 (hypothetical protein SDJN03_02178, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 120.6 bits (301), Expect = 6.9e-24 Identity = 67/86 (77.91%), Postives = 73/86 (84.88%), Query Frame = 0
BLAST of Sed0021208 vs. NCBI nr
Match: KAG7034974.1 (hypothetical protein SDJN02_01767, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 119.4 bits (298), Expect = 1.5e-23 Identity = 70/90 (77.78%), Postives = 75/90 (83.33%), Query Frame = 0
BLAST of Sed0021208 vs. NCBI nr
Match: KAG7010736.1 (hypothetical protein SDJN02_27532, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 113.6 bits (283), Expect = 8.4e-22 Identity = 65/90 (72.22%), Postives = 71/90 (78.89%), Query Frame = 0
BLAST of Sed0021208 vs. NCBI nr
Match: KAG6570886.1 (hypothetical protein SDJN03_29801, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 112.5 bits (280), Expect = 1.9e-21 Identity = 61/86 (70.93%), Postives = 68/86 (79.07%), Query Frame = 0
BLAST of Sed0021208 vs. ExPASy TrEMBL
Match: A0A5D3DKS5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold27G00040 PE=4 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 3.0e-25 Identity = 70/90 (77.78%), Postives = 72/90 (80.00%), Query Frame = 0
BLAST of Sed0021208 vs. ExPASy TrEMBL
Match: A0A0A0LR11 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G418340 PE=4 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 3.0e-25 Identity = 70/90 (77.78%), Postives = 72/90 (80.00%), Query Frame = 0
BLAST of Sed0021208 vs. ExPASy TrEMBL
Match: A0A5C7HG95 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_020628 PE=4 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 6.5e-20 Identity = 59/86 (68.60%), Postives = 67/86 (77.91%), Query Frame = 0
BLAST of Sed0021208 vs. ExPASy TrEMBL
Match: V4UEV4 (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10017336mg PE=4 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 6.7e-17 Identity = 51/86 (59.30%), Postives = 63/86 (73.26%), Query Frame = 0
BLAST of Sed0021208 vs. ExPASy TrEMBL
Match: A0A2H5N696 (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_278480 PE=4 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 1.3e-15 Identity = 49/86 (56.98%), Postives = 62/86 (72.09%), Query Frame = 0
BLAST of Sed0021208 vs. TAIR 10
Match: AT1G19020.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G48180.1); Has 88 Blast hits to 88 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 88; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 41.6 bits (96), Expect = 3.8e-04 Identity = 29/81 (35.80%), Postives = 42/81 (51.85%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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