Sed0021194 (gene) Chayote v1

Overview


Name	Sed0021194
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Protein transport SEC13-like protein
Location	LG05: 28698277 .. 28701803 (+)
RNA-Seq Expression	Sed0021194
Synteny	Sed0021194

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTCTCTCAGAAACCAGAAGCGCATGAATTTCTGAATCTTCTTCTTCCATCCTTCGCATCGCACAAGTGCATACCAATCCAATTGGATCTGCAATTCGTGTGCTATCAAAGGTTGCCTTCATTTCCATCCTTAATTCAATGCACTCACATGATTGATCAACATTTATTTTGATTCATTTTCATTTCTTGAATTCAGTTATGAAATCCAAGGCATTCTCATTATTGTTTATGCGTGTGACTTTTCTGAAATTTACAGTTTTCTTGTCATCGATTTTTTTTTTTCTTTTCTTGAACGTCTTACTGATTGTTGCTGGTCTGATTGGTTGATTTGTCCCCATCGTTTGTATGATCATAAAACTTGAAATTAGGGCTTAGGGTTCTGTATAGATCTGATCTAGTTATGATTGTGGTGAATATTACGTTCCCTGAACTTTTCTTTTGGAATGATTTGGTTTGGTGTGTTCCCACAAATCCTGCTCGTGAAGAGGTTGTTGATTGAATTTACTAAAATTTGATCTTGTGATTTGGCATCTTTTAATTTTAGTTTTGTCAATGAATTGAAACCGGAAGTGAAGCAATCCTTGTTTCGTATCAGAGTAGTCGGATTTTATGTTTGCTTGTTCTTAATTAGTTTGTCCTAATAATTATTATTTAGAAACTAAGTTCTCGTGTCTAGACTAGGGATGGGCGTGGTTACCCAAAAAAAAAATAGAAACTAAGCTCTACATTTTGTCCTTGTACTTTAATATCGAAAAGCCTTTGGTGTGGTGGTTGATAATAACTGTAATCTTGGCACAAATTTCAGAATAGTTCAAAAAAGATACGAGAATGCATTCATTCGTGTTTTTATGTACAAGGAAGTAGGGGAAGTCTCAGAATGATTCTTGTATTAATGGTCATTGGTCATTGTTCTAGCAGAATATGGTGGTCAATGTTATGAAGTTCTTACATTAGATTGTTTAACACTCAAAACATCCAAAATTTCCATTTTTAGCTTTTGATCAGTGTCTGTTGATTTGGTATAGCATAGATTTGTCGCTAAACGTAACCGGGAGAACTTTTTAGATGTCTGTCTAGAGAGAGGTTGCCAAGTTTGTTTGTTGAAACAGAGATGAGATAGATATTTTAAACAATTTTTTACCTAGGCTTCTTCTGGGTGTTCTTTGTTTAATATCTATTGTAAATGCTCCTGTTTTTCTCCTAATGAATGTTACATGGGGGAGTTTTTTAGCTATCTTATGTGGTTCTTGGACGGGACAGATTGTTTTGTCTTCCCTTCTTGATTATACTTTGTTGTATTTCTAATATGTTATTGCTTATTTCAAAATGGGAAGGGTTCTGTGAAACTGTGCGTACTCTGTTTTCCTTCTTGATGGTTATACACTTTCTTTTCTATTGTCATTACTTATCCGCAAAAGACAAGAGTTTTGTGGTATTATGCTTTCTCTGTTTGATTAATACGTTTTCTATTTCTATTTTTGTGATTTCTTATCGAAAAAAAAAAAGAAAGAAATTTTTTGTGGAATTGTGCTTGCTCTATTTTATTTTAAATATGTTATTTCTTGTGCCTCTTTTTGGGGGCCGTTCAACATTTTAGTAAGGAATATTGCACTCTTGTATAGCTGTCAGCATCCCATACTATCATTTTTAGCTTTTGCGAGACTTTTCTTTGAAGCCTTGTTTAGAAAGCTGCATTATTGCGAGACCTTTCTTCATAAATTCTTTTCTACTATAACGTTTAGAATTTTCTATTCCTAGGGAAATACAACCGTAGAAAGGATAAAAAAAAAAGTCAAATGAGATGACTATTCTTAATGTCATTGTTTGTCATAGCTTATGACTTAATTGATGTAGTCGGCGTCTCAATGACAGAGATTTGGAGTCTCTAAGTTATGCTCTTTTGGAAGTCCCAGATTCAAAATCTACAAGTGAAATCCCTTGTTATCTCCGATTCTCAGTTATGTAGTAACCAGAGAACTTAATTAATGTGAACCTCTGATTCTCCGATTCAAAATCTACTGGTTTTTGGTATTAAGATGGGCATGGGTCCCTTAGGTATGTAGTAATGTGAATCTCTGATTCTCAGTTATAAAAAAGAACTTAATGTATCCTTTTGAGACGTCAAAGTTTATAGTTTCCCTATAATATTTATGAAAAATATCATGTATTAAGATGCATATTTTCCACAGAGCTACCACGAGGAAAATCAAGTACCAATTTCCAGCACCTATTACTCACTGTTGAATTAGTAACCAGAGAAAATGCAATCTCAAAAGATTGAAATTGGTCACGAAGACACCATCCATGATGTTGCTATGGATTATTATGGAAAGCGCGTTGCATCAGCTTCGTCTGACCAGACGATCAAGATCACTAGTGTAAGCAACTCAGCCACTCAACATCTTGCAACGCTGACTGGGCACCTAGGACCTGTATGGCAGGTTGCCTGGGCACACCCGAAATTCGGTTCTTTACTTGCTTCGTGTTCTTACGATGGCCGCATCATAATATGGAAGGAAGGCAATCAAAATGAGTGGTCACAAGCCCACATCTTCGATGATCATAAAACATCTGTTAACTCAATTGCTTGGGCCCCTCATGAAGTGGGTCTTTGTTTGGCATGTGGTTCATCTGATGGCAACATTTCTGTATTCATTGCAAGAGCGGATGGTGGTTGGGACACTTCCAGGATCGATCAAGCACACCCAGTGGGTGTCACGTCTGTTTCATGGGCTCCATCTACCGCACCGGGTGCCCTTGTCGGCTCCACATTACTGAACCCCGTTCAGAAGCTCTGCTCGGGTGGTTGCGACAACACGGTGAAGGTATGGAAGCTCGACAATGGGGTTTGGAAGCTGGACTGCTTTCCAGCTCTCCAAATGCACAGTGACTGGGTTAGAGATGTTTCCTGGGCTCCTAACTTTGGACTGCCGAAATCGACAATTGCAAGTGCGTCTCAGGACGGGAAAGTTGTTATATGGACCGTGGTTGGAGAAGGAGATGAATGGGAAGGTAAGGTACTAAAGGACTTCAAAACCCCTGTTTGGAGGGTATCTTGGTCATTAACAGGCAACATCCTGGCTGTGGCTGATGGAAATAACAATGTTAGTTTGTGGAAGGAAGTTGTGGATGGTGATTGGCAGCAGGTTTCAACAGTGGAGCATTAAGTTTCCTCCGTTTTAGTTGGGTTCTTACTTCAGAAACACACAATAATAACAGATGATGTTTGCTTTGAAAATGTCACAGATTTTGAATAAATGACATGATTAATAAAATCTTCAAGGTATCGATTTACCGACAGCAAATTCCGAAGGTGCAAGATGGAAAATCGAACTAGGATGGTAATTAGAACATTTATTCATTAAGTCAGGCTTTGTTACCCCCCACCCCAGAATAGGAAGGTGGATCATAAATTCAATATTATTTGTTTGCCCAAATGAATATTTCTAATAATGTTTTCGAAGTTTGCGGATTCGAATGTGTTACTCCATGGTCAAGTATACATGTTAAATACCATTAGACTAACC

mRNA sequence

ATTCTCTCAGAAACCAGAAGCGCATGAATTTCTGAATCTTCTTCTTCCATCCTTCGCATCGCACAAGTGCATACCAATCCAATTGGATCTGCAATTCGTGTGCTATCAAAGAGCTACCACGAGGAAAATCAAGTACCAATTTCCAGCACCTATTACTCACTGTTGAATTAGTAACCAGAGAAAATGCAATCTCAAAAGATTGAAATTGGTCACGAAGACACCATCCATGATGTTGCTATGGATTATTATGGAAAGCGCGTTGCATCAGCTTCGTCTGACCAGACGATCAAGATCACTAGTGTAAGCAACTCAGCCACTCAACATCTTGCAACGCTGACTGGGCACCTAGGACCTGTATGGCAGGTTGCCTGGGCACACCCGAAATTCGGTTCTTTACTTGCTTCGTGTTCTTACGATGGCCGCATCATAATATGGAAGGAAGGCAATCAAAATGAGTGGTCACAAGCCCACATCTTCGATGATCATAAAACATCTGTTAACTCAATTGCTTGGGCCCCTCATGAAGTGGGTCTTTGTTTGGCATGTGGTTCATCTGATGGCAACATTTCTGTATTCATTGCAAGAGCGGATGGTGGTTGGGACACTTCCAGGATCGATCAAGCACACCCAGTGGGTGTCACGTCTGTTTCATGGGCTCCATCTACCGCACCGGGTGCCCTTGTCGGCTCCACATTACTGAACCCCGTTCAGAAGCTCTGCTCGGGTGGTTGCGACAACACGGTGAAGGTATGGAAGCTCGACAATGGGGTTTGGAAGCTGGACTGCTTTCCAGCTCTCCAAATGCACAGTGACTGGGTTAGAGATGTTTCCTGGGCTCCTAACTTTGGACTGCCGAAATCGACAATTGCAAGTGCGTCTCAGGACGGGAAAGTTGTTATATGGACCGTGGTTGGAGAAGGAGATGAATGGGAAGGTAAGGTACTAAAGGACTTCAAAACCCCTGTTTGGAGGGTATCTTGGTCATTAACAGGCAACATCCTGGCTGTGGCTGATGGAAATAACAATGTTAGTTTGTGGAAGGAAGTTGTGGATGGTGATTGGCAGCAGGTTTCAACAGTGGAGCATTAAGTTTCCTCCGTTTTAGTTGGGTTCTTACTTCAGAAACACACAATAATAACAGATGATGTTTGCTTTGAAAATGTCACAGATTTTGAATAAATGACATGATTAATAAAATCTTCAAGGTATCGATTTACCGACAGCAAATTCCGAAGGTGCAAGATGGAAAATCGAACTAGGATGGTAATTAGAACATTTATTCATTAAGTCAGGCTTTGTTACCCCCCACCCCAGAATAGGAAGGTGGATCATAAATTCAATATTATTTGTTTGCCCAAATGAATATTTCTAATAATGTTTTCGAAGTTTGCGGATTCGAATGTGTTACTCCATGGTCAAGTATACATGTTAAATACCATTAGACTAACC

Coding sequence (CDS)

ATGCAATCTCAAAAGATTGAAATTGGTCACGAAGACACCATCCATGATGTTGCTATGGATTATTATGGAAAGCGCGTTGCATCAGCTTCGTCTGACCAGACGATCAAGATCACTAGTGTAAGCAACTCAGCCACTCAACATCTTGCAACGCTGACTGGGCACCTAGGACCTGTATGGCAGGTTGCCTGGGCACACCCGAAATTCGGTTCTTTACTTGCTTCGTGTTCTTACGATGGCCGCATCATAATATGGAAGGAAGGCAATCAAAATGAGTGGTCACAAGCCCACATCTTCGATGATCATAAAACATCTGTTAACTCAATTGCTTGGGCCCCTCATGAAGTGGGTCTTTGTTTGGCATGTGGTTCATCTGATGGCAACATTTCTGTATTCATTGCAAGAGCGGATGGTGGTTGGGACACTTCCAGGATCGATCAAGCACACCCAGTGGGTGTCACGTCTGTTTCATGGGCTCCATCTACCGCACCGGGTGCCCTTGTCGGCTCCACATTACTGAACCCCGTTCAGAAGCTCTGCTCGGGTGGTTGCGACAACACGGTGAAGGTATGGAAGCTCGACAATGGGGTTTGGAAGCTGGACTGCTTTCCAGCTCTCCAAATGCACAGTGACTGGGTTAGAGATGTTTCCTGGGCTCCTAACTTTGGACTGCCGAAATCGACAATTGCAAGTGCGTCTCAGGACGGGAAAGTTGTTATATGGACCGTGGTTGGAGAAGGAGATGAATGGGAAGGTAAGGTACTAAAGGACTTCAAAACCCCTGTTTGGAGGGTATCTTGGTCATTAACAGGCAACATCCTGGCTGTGGCTGATGGAAATAACAATGTTAGTTTGTGGAAGGAAGTTGTGGATGGTGATTGGCAGCAGGTTTCAACAGTGGAGCATTAA

Protein sequence

MQSQKIEIGHEDTIHDVAMDYYGKRVASASSDQTIKITSVSNSATQHLATLTGHLGPVWQVAWAHPKFGSLLASCSYDGRIIIWKEGNQNEWSQAHIFDDHKTSVNSIAWAPHEVGLCLACGSSDGNISVFIARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSTLLNPVQKLCSGGCDNTVKVWKLDNGVWKLDCFPALQMHSDWVRDVSWAPNFGLPKSTIASASQDGKVVIWTVVGEGDEWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEVVDGDWQQVSTVEH

Homology

[Close]

BLAST of Sed0021194 vs. NCBI nr
Match: KAG7018318.1 (Protein transport protein SEC13-like B, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 608.2 bits (1567), Expect = 3.8e-170
Identity = 282/300 (94.00%), Postives = 291/300 (97.00%), Query Frame = 0


Query: 1   MQSQKIEIGHEDTIHDVAMDYYGKRVASASSDQTIKITSVSNSATQHLATLTGHLGPVWQ 60
           M +QKIE GH+DTIHDVAMDYYGKRVASASSDQTIKIT VSNSATQHLATLTGHLGPVWQ
Sbjct: 88  MPAQKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGHLGPVWQ 147

Query: 61  VAWAHPKFGSLLASCSYDGRIIIWKEGNQNEWSQAHIFDDHKTSVNSIAWAPHEVGLCLA 120
           VAWAHPKFGSLLASCSYDGR+I+WKEGNQNEWSQAHIFDDHK+SVNSIAWAPHEVGLCLA
Sbjct: 148 VAWAHPKFGSLLASCSYDGRVILWKEGNQNEWSQAHIFDDHKSSVNSIAWAPHEVGLCLA 207

Query: 121 CGSSDGNISVFIARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSTLLNPVQKLCS 180
           CGSSDGNISVF ARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGS LL+PVQKLCS
Sbjct: 208 CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSALLDPVQKLCS 267

Query: 181 GGCDNTVKVWKLDNGVWKLDCFPALQMHSDWVRDVSWAPNFGLPKSTIASASQDGKVVIW 240
           GGCDNTVKVWKL NGVWK+DCFPALQMH+DWVRDVSWAPN GLPKSTIASASQDGKVVIW
Sbjct: 268 GGCDNTVKVWKLYNGVWKMDCFPALQMHTDWVRDVSWAPNLGLPKSTIASASQDGKVVIW 327

Query: 241 TVVGEGDEWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEVVDGDWQQVSTVE 300
           TVV EGD+WEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKE VDGDWQQVSTVE
Sbjct: 328 TVVREGDQWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTVE 387

[Close]

BLAST of Sed0021194 vs. NCBI nr
Match: XP_023528381.1 (protein transport protein SEC13 homolog B [Cucurbita pepo subsp. pepo] >XP_023528382.1 protein transport protein SEC13 homolog B [Cucurbita pepo subsp. pepo] >XP_023528383.1 protein transport protein SEC13 homolog B [Cucurbita pepo subsp. pepo])

HSP 1 Score: 608.2 bits (1567), Expect = 3.8e-170
Identity = 282/300 (94.00%), Postives = 291/300 (97.00%), Query Frame = 0


Query: 1   MQSQKIEIGHEDTIHDVAMDYYGKRVASASSDQTIKITSVSNSATQHLATLTGHLGPVWQ 60
           M +QKIE GH+DTIHDVAMDYYGKRVASASSDQTIKIT VSNSATQHLATLTGHLGPVWQ
Sbjct: 1   MPAQKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGHLGPVWQ 60

Query: 61  VAWAHPKFGSLLASCSYDGRIIIWKEGNQNEWSQAHIFDDHKTSVNSIAWAPHEVGLCLA 120
           VAWAHPKFGSLLASCSYDGR+I+WKEGNQNEWSQAHIFDDHK+SVNSIAWAPHEVGLCLA
Sbjct: 61  VAWAHPKFGSLLASCSYDGRVILWKEGNQNEWSQAHIFDDHKSSVNSIAWAPHEVGLCLA 120

Query: 121 CGSSDGNISVFIARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSTLLNPVQKLCS 180
           CGSSDGNISVF ARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGS LL+PVQKLCS
Sbjct: 121 CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSALLDPVQKLCS 180

Query: 181 GGCDNTVKVWKLDNGVWKLDCFPALQMHSDWVRDVSWAPNFGLPKSTIASASQDGKVVIW 240
           GGCDNTVKVWKL NGVWK+DCFPALQMH+DWVRDVSWAPN GLPKSTIASASQDGKVVIW
Sbjct: 181 GGCDNTVKVWKLYNGVWKMDCFPALQMHTDWVRDVSWAPNLGLPKSTIASASQDGKVVIW 240

Query: 241 TVVGEGDEWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEVVDGDWQQVSTVE 300
           TVV EGD+WEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKE VDGDWQQVSTVE
Sbjct: 241 TVVREGDQWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTVE 300

[Close]

BLAST of Sed0021194 vs. NCBI nr
Match: XP_022980068.1 (protein transport protein SEC13 homolog B [Cucurbita maxima] >XP_022980069.1 protein transport protein SEC13 homolog B [Cucurbita maxima] >XP_022980070.1 protein transport protein SEC13 homolog B [Cucurbita maxima])

HSP 1 Score: 605.9 bits (1561), Expect = 1.9e-169
Identity = 281/300 (93.67%), Postives = 290/300 (96.67%), Query Frame = 0


Query: 1   MQSQKIEIGHEDTIHDVAMDYYGKRVASASSDQTIKITSVSNSATQHLATLTGHLGPVWQ 60
           M +QKIE GH+DTIHDVAMDYYGKRVASASSDQTIKIT VSNSATQHLATLTGHLGPVWQ
Sbjct: 1   MPAQKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGHLGPVWQ 60

Query: 61  VAWAHPKFGSLLASCSYDGRIIIWKEGNQNEWSQAHIFDDHKTSVNSIAWAPHEVGLCLA 120
           VAWAHPKFGSLLASCSYDGR+I+WKEGNQNEWSQAHIFDDHK+SVNSIAWAPHEVGLCLA
Sbjct: 61  VAWAHPKFGSLLASCSYDGRVILWKEGNQNEWSQAHIFDDHKSSVNSIAWAPHEVGLCLA 120

Query: 121 CGSSDGNISVFIARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSTLLNPVQKLCS 180
           CGSSDGNISVF ARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGS LL+PVQKLCS
Sbjct: 121 CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSALLDPVQKLCS 180

Query: 181 GGCDNTVKVWKLDNGVWKLDCFPALQMHSDWVRDVSWAPNFGLPKSTIASASQDGKVVIW 240
           GGCDNTVKVWKL NGVWK+DCFPALQMH+DWVRDVSWAPN GLPKSTIASASQDGKVVIW
Sbjct: 181 GGCDNTVKVWKLYNGVWKMDCFPALQMHTDWVRDVSWAPNLGLPKSTIASASQDGKVVIW 240

Query: 241 TVVGEGDEWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEVVDGDWQQVSTVE 300
           TVV EGD+WEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKE VD DWQQVSTVE
Sbjct: 241 TVVREGDQWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDSDWQQVSTVE 300

[Close]

BLAST of Sed0021194 vs. NCBI nr
Match: XP_022955988.1 (protein transport protein SEC13 homolog B [Cucurbita moschata] >XP_022955989.1 protein transport protein SEC13 homolog B [Cucurbita moschata] >XP_022955990.1 protein transport protein SEC13 homolog B [Cucurbita moschata])

HSP 1 Score: 605.1 bits (1559), Expect = 3.2e-169
Identity = 281/300 (93.67%), Postives = 290/300 (96.67%), Query Frame = 0


Query: 1   MQSQKIEIGHEDTIHDVAMDYYGKRVASASSDQTIKITSVSNSATQHLATLTGHLGPVWQ 60
           M +QKIE GH+DTIHDVAMDYYGKRVASASSDQTIKIT VSNSATQHLATLTGHLGPVWQ
Sbjct: 1   MPAQKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGHLGPVWQ 60

Query: 61  VAWAHPKFGSLLASCSYDGRIIIWKEGNQNEWSQAHIFDDHKTSVNSIAWAPHEVGLCLA 120
           VAWAHPKFGSLLASCSYDGR+I+WKEGNQNEWSQAHIFDDHK+SVNSIAWAPHEVGLCLA
Sbjct: 61  VAWAHPKFGSLLASCSYDGRVILWKEGNQNEWSQAHIFDDHKSSVNSIAWAPHEVGLCLA 120

Query: 121 CGSSDGNISVFIARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSTLLNPVQKLCS 180
           CGSSDGNISVF ARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGS LL+PVQKLCS
Sbjct: 121 CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSALLDPVQKLCS 180

Query: 181 GGCDNTVKVWKLDNGVWKLDCFPALQMHSDWVRDVSWAPNFGLPKSTIASASQDGKVVIW 240
           GGCDNTVKVWKL NGVWK+DCFPALQMH+DWVRDVSWA N GLPKSTIASASQDGKVVIW
Sbjct: 181 GGCDNTVKVWKLYNGVWKMDCFPALQMHTDWVRDVSWASNLGLPKSTIASASQDGKVVIW 240

Query: 241 TVVGEGDEWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEVVDGDWQQVSTVE 300
           TVV EGD+WEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKE VDGDWQQVSTVE
Sbjct: 241 TVVREGDQWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTVE 300

[Close]

BLAST of Sed0021194 vs. NCBI nr
Match: XP_004150601.1 (protein transport protein SEC13 homolog B [Cucumis sativus] >KGN58046.1 hypothetical protein Csa_009624 [Cucumis sativus])

HSP 1 Score: 604.0 bits (1556), Expect = 7.2e-169
Identity = 281/300 (93.67%), Postives = 287/300 (95.67%), Query Frame = 0


Query: 1   MQSQKIEIGHEDTIHDVAMDYYGKRVASASSDQTIKITSVSNSATQHLATLTGHLGPVWQ 60
           M  QKIE GH+DTIHDVAMDYYGKRVASASSDQTIKIT VSNSATQHLATLTGH GPVWQ
Sbjct: 1   MPGQKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGHQGPVWQ 60

Query: 61  VAWAHPKFGSLLASCSYDGRIIIWKEGNQNEWSQAHIFDDHKTSVNSIAWAPHEVGLCLA 120
           VAWAHPKFG LLASCSYDGR+IIWKEGNQNEWSQAHIFDDHK+SVNSIAWAPHEVGLCLA
Sbjct: 61  VAWAHPKFGPLLASCSYDGRVIIWKEGNQNEWSQAHIFDDHKSSVNSIAWAPHEVGLCLA 120

Query: 121 CGSSDGNISVFIARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSTLLNPVQKLCS 180
           CGSSDGNISVF ARADGGWDTSRIDQAHPVGVTSVSWAPST PGALVGS LL+PVQKLCS
Sbjct: 121 CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTTPGALVGSALLDPVQKLCS 180

Query: 181 GGCDNTVKVWKLDNGVWKLDCFPALQMHSDWVRDVSWAPNFGLPKSTIASASQDGKVVIW 240
           GGCDNTVKVWKL NGVWK+DCFPALQMHSDWVRDVSWAPN GLPKSTIASASQDGKVVIW
Sbjct: 181 GGCDNTVKVWKLYNGVWKMDCFPALQMHSDWVRDVSWAPNLGLPKSTIASASQDGKVVIW 240

Query: 241 TVVGEGDEWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEVVDGDWQQVSTVE 300
           TVV EGD+WEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKE VDGDWQQVSTVE
Sbjct: 241 TVVKEGDQWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTVE 300

[Close]

BLAST of Sed0021194 vs. ExPASy Swiss-Prot
Match: O64740 (Protein transport protein SEC13 homolog B OS=Arabidopsis thaliana OX=3702 GN=SEC13B PE=1 SV=1)

HSP 1 Score: 533.9 bits (1374), Expect = 1.2e-150
Identity = 240/301 (79.73%), Postives = 272/301 (90.37%), Query Frame = 0


Query: 1   MQSQKIEIGHEDTIHDVAMDYYGKRVASASSDQTIKITSVSNS-ATQHLATLTGHLGPVW 60
           M  QKIE GHED +HDV MDYYGKR+A+ASSD TIKIT VSN+  +Q LATLTGH GPVW
Sbjct: 1   MPGQKIETGHEDIVHDVQMDYYGKRIATASSDCTIKITGVSNNGGSQQLATLTGHRGPVW 60

Query: 61  QVAWAHPKFGSLLASCSYDGRIIIWKEGNQNEWSQAHIFDDHKTSVNSIAWAPHEVGLCL 120
           +VAWAHPK+GS+LASCSYDG++I+WKEGNQN+W+Q H+F DHK+SVNSIAWAPH++GL L
Sbjct: 61  EVAWAHPKYGSILASCSYDGQVILWKEGNQNQWTQDHVFTDHKSSVNSIAWAPHDIGLSL 120

Query: 121 ACGSSDGNISVFIARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSTLLNPVQKLC 180
           ACGSSDGNISVF ARADGGWDTSRIDQAHPVGVTSVSWAP+TAPGALV S LL+PV KL 
Sbjct: 121 ACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPATAPGALVSSGLLDPVYKLA 180

Query: 181 SGGCDNTVKVWKLDNGVWKLDCFPALQMHSDWVRDVSWAPNFGLPKSTIASASQDGKVVI 240
           SGGCDNTVKVWKL NG WK+DCFPALQ H+DWVRDV+WAPN GLPKSTIAS SQDGKV+I
Sbjct: 181 SGGCDNTVKVWKLANGSWKMDCFPALQKHTDWVRDVAWAPNLGLPKSTIASGSQDGKVII 240

Query: 241 WTVVGEGDEWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEVVDGDWQQVSTV 300
           WTV  EG++WEGKVLKDF TPVWRVSWSLTGN+LAV+DGNNNV++WKE VDG+W+QV+ V
Sbjct: 241 WTVGKEGEQWEGKVLKDFMTPVWRVSWSLTGNLLAVSDGNNNVTVWKEAVDGEWEQVTAV 300

[Close]

BLAST of Sed0021194 vs. ExPASy Swiss-Prot
Match: Q9SRI1 (Protein transport protein SEC13 homolog A OS=Arabidopsis thaliana OX=3702 GN=SEC13A PE=1 SV=1)

HSP 1 Score: 530.8 bits (1366), Expect = 1.0e-149
Identity = 239/301 (79.40%), Postives = 270/301 (89.70%), Query Frame = 0


Query: 1   MQSQKIEIGHEDTIHDVAMDYYGKRVASASSDQTIKITSVSNS-ATQHLATLTGHLGPVW 60
           M  QKIE GH DTIHDV MDYYGKRVA+ASSD TIKIT VSNS  +QHLATLTGH GPVW
Sbjct: 1   MPPQKIETGHSDTIHDVVMDYYGKRVATASSDCTIKITGVSNSGGSQHLATLTGHRGPVW 60

Query: 61  QVAWAHPKFGSLLASCSYDGRIIIWKEGNQNEWSQAHIFDDHKTSVNSIAWAPHEVGLCL 120
           QVAWAHPKFGSLLASCSYDG+II+WKEGNQN+W+QAH+F DHK SVNSIAWAPHE+GL L
Sbjct: 61  QVAWAHPKFGSLLASCSYDGQIILWKEGNQNQWTQAHVFTDHKVSVNSIAWAPHELGLSL 120

Query: 121 ACGSSDGNISVFIARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSTLLNPVQKLC 180
           ACG+SDGNISVF ARADGGWDT++IDQAHPVGVTSVSWAP+T PGALV S +++PV KL 
Sbjct: 121 ACGASDGNISVFSARADGGWDTTKIDQAHPVGVTSVSWAPATEPGALVSSGMIDPVYKLA 180

Query: 181 SGGCDNTVKVWKLDNGVWKLDCFPALQMHSDWVRDVSWAPNFGLPKSTIASASQDGKVVI 240
           SGGCD+TVKVWK  NG WK+DCFPAL  H+DWVRDV+WAPN GLPKSTIAS S+DGKV+I
Sbjct: 181 SGGCDSTVKVWKFSNGSWKMDCFPALNKHTDWVRDVAWAPNLGLPKSTIASGSEDGKVII 240

Query: 241 WTVVGEGDEWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEVVDGDWQQVSTV 300
           WT+  EG++WEG VLKDFKTPVWRVSWSLTGN+LAV+DGNNNV++WKE VDG+W+QV+ V
Sbjct: 241 WTIGKEGEQWEGTVLKDFKTPVWRVSWSLTGNLLAVSDGNNNVTVWKESVDGEWEQVTVV 300

[Close]

BLAST of Sed0021194 vs. ExPASy Swiss-Prot
Match: Q9D1M0 (Protein SEC13 homolog OS=Mus musculus OX=10090 GN=Sec13 PE=1 SV=3)

HSP 1 Score: 337.4 bits (864), Expect = 1.6e-91
Identity = 157/299 (52.51%), Postives = 203/299 (67.89%), Query Frame = 0


Query: 6   IEIGHEDTIHDVAMDYYGKRVASASSDQTIKITSVSNSATQHLATLTGHLGPVWQVAWAH 65
           ++  HED IHD  MDYYG R+A+ SSD+++KI  V N     +A L GH GPVWQVAWAH
Sbjct: 8   VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAH 67

Query: 66  PKFGSLLASCSYDGRIIIWKEGNQNEWSQAHIFDDHKTSVNSIAWAPHEVGLCLACGSSD 125
           P +G++LASCSYD ++IIWKE N   W + H    H +SVNS+ WAPH+ GL LACGSSD
Sbjct: 68  PMYGNILASCSYDRKVIIWKEEN-GTWEKTHEHSGHDSSVNSVCWAPHDYGLILACGSSD 127

Query: 126 GNISVFIARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALV---GSTLLNPVQKLCSGG 185
           G IS+     +G W+  +I+ AH +G  +VSWAP+  PG+L+        N ++K  SGG
Sbjct: 128 GAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIKKFASGG 187

Query: 186 CDNTVKVWK-LDNGVWKLDCFPALQMHSDWVRDVSWAPNFGLPKSTIASASQDGKVVIWT 245
           CDN +K+W+  ++G WK +    L+ HSDWVRDV+WAP+ GLP STIAS SQDG+V IWT
Sbjct: 188 CDNLIKLWREEEDGQWKEE--QKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWT 247

Query: 246 V-VGEGDEWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEVVDGDWQQVSTV 300
                G+ W  K+L  F   VW VSWS+T NILAV+ G+N V+LWKE VDG W  +S V
Sbjct: 248 CDDASGNMWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCISDV 303

[Close]

BLAST of Sed0021194 vs. ExPASy Swiss-Prot
Match: Q5XFW8 (Protein SEC13 homolog OS=Rattus norvegicus OX=10116 GN=Sec13 PE=1 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 1.6e-91
Identity = 157/299 (52.51%), Postives = 203/299 (67.89%), Query Frame = 0


Query: 6   IEIGHEDTIHDVAMDYYGKRVASASSDQTIKITSVSNSATQHLATLTGHLGPVWQVAWAH 65
           ++  HED IHD  MDYYG R+A+ SSD+++KI  V N     +A L GH GPVWQVAWAH
Sbjct: 8   VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAH 67

Query: 66  PKFGSLLASCSYDGRIIIWKEGNQNEWSQAHIFDDHKTSVNSIAWAPHEVGLCLACGSSD 125
           P +G++LASCSYD ++IIWKE N   W + H    H +SVNS+ WAPH+ GL LACGSSD
Sbjct: 68  PMYGNILASCSYDRKVIIWKEEN-GTWEKTHEHSGHDSSVNSVCWAPHDYGLILACGSSD 127

Query: 126 GNISVFIARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALV---GSTLLNPVQKLCSGG 185
           G IS+     +G W+  +I+ AH +G  +VSWAP+  PG+L+        N ++K  SGG
Sbjct: 128 GAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIKKFASGG 187

Query: 186 CDNTVKVWK-LDNGVWKLDCFPALQMHSDWVRDVSWAPNFGLPKSTIASASQDGKVVIWT 245
           CDN +K+W+  ++G WK +    L+ HSDWVRDV+WAP+ GLP STIAS SQDG+V IWT
Sbjct: 188 CDNLIKLWREEEDGQWKEE--QKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWT 247

Query: 246 V-VGEGDEWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEVVDGDWQQVSTV 300
                G+ W  K+L  F   VW VSWS+T NILAV+ G+N V+LWKE VDG W  +S V
Sbjct: 248 CDDASGNMWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCISDV 303

[Close]

BLAST of Sed0021194 vs. ExPASy Swiss-Prot
Match: Q3ZCC9 (Protein SEC13 homolog OS=Bos taurus OX=9913 GN=SEC13 PE=2 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 6.2e-91
Identity = 157/299 (52.51%), Postives = 202/299 (67.56%), Query Frame = 0


Query: 6   IEIGHEDTIHDVAMDYYGKRVASASSDQTIKITSVSNSATQHLATLTGHLGPVWQVAWAH 65
           ++  HED IHD  MDYYG R+A+ SSD+++KI  V N     +A L GH GPVWQVAWAH
Sbjct: 8   VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILVADLRGHEGPVWQVAWAH 67

Query: 66  PKFGSLLASCSYDGRIIIWKEGNQNEWSQAHIFDDHKTSVNSIAWAPHEVGLCLACGSSD 125
           P +G++LASCSYD ++IIWKE N   W + H    H +SVNS+ WAPH+ GL LACGSSD
Sbjct: 68  PMYGNILASCSYDRKVIIWKEEN-GTWEKTHEHTGHDSSVNSVCWAPHDYGLILACGSSD 127

Query: 126 GNISVFIARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALV---GSTLLNPVQKLCSGG 185
           G IS+      G W+  +I+ AH +G  +VSWAP+  PG+L+        N ++K  SGG
Sbjct: 128 GAISLLTYTGLGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIKKFASGG 187

Query: 186 CDNTVKVWK-LDNGVWKLDCFPALQMHSDWVRDVSWAPNFGLPKSTIASASQDGKVVIWT 245
           CDN +K+WK  ++G WK +    L+ HSDWVRDV+WAP+ GLP STIAS SQDG+V +WT
Sbjct: 188 CDNLIKLWKEEEDGQWKEE--QKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFVWT 247

Query: 246 V-VGEGDEWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEVVDGDWQQVSTV 300
                G+ W  K+L  F   VW VSWS+T NILAV+ G+N V+LWKE VDG W  +S V
Sbjct: 248 CDDASGNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCISDV 303

[Close]

BLAST of Sed0021194 vs. ExPASy TrEMBL
Match: A0A6J1IY63 (protein transport protein SEC13 homolog B OS=Cucurbita maxima OX=3661 GN=LOC111479584 PE=3 SV=1)

HSP 1 Score: 605.9 bits (1561), Expect = 9.1e-170
Identity = 281/300 (93.67%), Postives = 290/300 (96.67%), Query Frame = 0


Query: 1   MQSQKIEIGHEDTIHDVAMDYYGKRVASASSDQTIKITSVSNSATQHLATLTGHLGPVWQ 60
           M +QKIE GH+DTIHDVAMDYYGKRVASASSDQTIKIT VSNSATQHLATLTGHLGPVWQ
Sbjct: 1   MPAQKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGHLGPVWQ 60

Query: 61  VAWAHPKFGSLLASCSYDGRIIIWKEGNQNEWSQAHIFDDHKTSVNSIAWAPHEVGLCLA 120
           VAWAHPKFGSLLASCSYDGR+I+WKEGNQNEWSQAHIFDDHK+SVNSIAWAPHEVGLCLA
Sbjct: 61  VAWAHPKFGSLLASCSYDGRVILWKEGNQNEWSQAHIFDDHKSSVNSIAWAPHEVGLCLA 120

Query: 121 CGSSDGNISVFIARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSTLLNPVQKLCS 180
           CGSSDGNISVF ARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGS LL+PVQKLCS
Sbjct: 121 CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSALLDPVQKLCS 180

Query: 181 GGCDNTVKVWKLDNGVWKLDCFPALQMHSDWVRDVSWAPNFGLPKSTIASASQDGKVVIW 240
           GGCDNTVKVWKL NGVWK+DCFPALQMH+DWVRDVSWAPN GLPKSTIASASQDGKVVIW
Sbjct: 181 GGCDNTVKVWKLYNGVWKMDCFPALQMHTDWVRDVSWAPNLGLPKSTIASASQDGKVVIW 240

Query: 241 TVVGEGDEWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEVVDGDWQQVSTVE 300
           TVV EGD+WEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKE VD DWQQVSTVE
Sbjct: 241 TVVREGDQWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDSDWQQVSTVE 300

[Close]

BLAST of Sed0021194 vs. ExPASy TrEMBL
Match: A0A6J1GWL3 (protein transport protein SEC13 homolog B OS=Cucurbita moschata OX=3662 GN=LOC111457822 PE=3 SV=1)

HSP 1 Score: 605.1 bits (1559), Expect = 1.6e-169
Identity = 281/300 (93.67%), Postives = 290/300 (96.67%), Query Frame = 0


Query: 1   MQSQKIEIGHEDTIHDVAMDYYGKRVASASSDQTIKITSVSNSATQHLATLTGHLGPVWQ 60
           M +QKIE GH+DTIHDVAMDYYGKRVASASSDQTIKIT VSNSATQHLATLTGHLGPVWQ
Sbjct: 1   MPAQKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGHLGPVWQ 60

Query: 61  VAWAHPKFGSLLASCSYDGRIIIWKEGNQNEWSQAHIFDDHKTSVNSIAWAPHEVGLCLA 120
           VAWAHPKFGSLLASCSYDGR+I+WKEGNQNEWSQAHIFDDHK+SVNSIAWAPHEVGLCLA
Sbjct: 61  VAWAHPKFGSLLASCSYDGRVILWKEGNQNEWSQAHIFDDHKSSVNSIAWAPHEVGLCLA 120

Query: 121 CGSSDGNISVFIARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSTLLNPVQKLCS 180
           CGSSDGNISVF ARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGS LL+PVQKLCS
Sbjct: 121 CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSALLDPVQKLCS 180

Query: 181 GGCDNTVKVWKLDNGVWKLDCFPALQMHSDWVRDVSWAPNFGLPKSTIASASQDGKVVIW 240
           GGCDNTVKVWKL NGVWK+DCFPALQMH+DWVRDVSWA N GLPKSTIASASQDGKVVIW
Sbjct: 181 GGCDNTVKVWKLYNGVWKMDCFPALQMHTDWVRDVSWASNLGLPKSTIASASQDGKVVIW 240

Query: 241 TVVGEGDEWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEVVDGDWQQVSTVE 300
           TVV EGD+WEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKE VDGDWQQVSTVE
Sbjct: 241 TVVREGDQWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTVE 300

[Close]

BLAST of Sed0021194 vs. ExPASy TrEMBL
Match: A0A0A0LDB9 (WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G462670 PE=3 SV=1)

HSP 1 Score: 604.0 bits (1556), Expect = 3.5e-169
Identity = 281/300 (93.67%), Postives = 287/300 (95.67%), Query Frame = 0


Query: 1   MQSQKIEIGHEDTIHDVAMDYYGKRVASASSDQTIKITSVSNSATQHLATLTGHLGPVWQ 60
           M  QKIE GH+DTIHDVAMDYYGKRVASASSDQTIKIT VSNSATQHLATLTGH GPVWQ
Sbjct: 1   MPGQKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGHQGPVWQ 60

Query: 61  VAWAHPKFGSLLASCSYDGRIIIWKEGNQNEWSQAHIFDDHKTSVNSIAWAPHEVGLCLA 120
           VAWAHPKFG LLASCSYDGR+IIWKEGNQNEWSQAHIFDDHK+SVNSIAWAPHEVGLCLA
Sbjct: 61  VAWAHPKFGPLLASCSYDGRVIIWKEGNQNEWSQAHIFDDHKSSVNSIAWAPHEVGLCLA 120

Query: 121 CGSSDGNISVFIARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSTLLNPVQKLCS 180
           CGSSDGNISVF ARADGGWDTSRIDQAHPVGVTSVSWAPST PGALVGS LL+PVQKLCS
Sbjct: 121 CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTTPGALVGSALLDPVQKLCS 180

Query: 181 GGCDNTVKVWKLDNGVWKLDCFPALQMHSDWVRDVSWAPNFGLPKSTIASASQDGKVVIW 240
           GGCDNTVKVWKL NGVWK+DCFPALQMHSDWVRDVSWAPN GLPKSTIASASQDGKVVIW
Sbjct: 181 GGCDNTVKVWKLYNGVWKMDCFPALQMHSDWVRDVSWAPNLGLPKSTIASASQDGKVVIW 240

Query: 241 TVVGEGDEWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEVVDGDWQQVSTVE 300
           TVV EGD+WEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKE VDGDWQQVSTVE
Sbjct: 241 TVVKEGDQWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTVE 300

[Close]

BLAST of Sed0021194 vs. ExPASy TrEMBL
Match: A0A1S4DWT1 (protein transport protein SEC13 homolog B OS=Cucumis melo OX=3656 GN=LOC103489960 PE=3 SV=1)

HSP 1 Score: 601.7 bits (1550), Expect = 1.7e-168
Identity = 279/300 (93.00%), Postives = 287/300 (95.67%), Query Frame = 0


Query: 1   MQSQKIEIGHEDTIHDVAMDYYGKRVASASSDQTIKITSVSNSATQHLATLTGHLGPVWQ 60
           M  QKIE GH+DTIHDVAMDYYGKRVASASSDQTIKIT VSNSATQHLATLTGH GPVWQ
Sbjct: 1   MPGQKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGHQGPVWQ 60

Query: 61  VAWAHPKFGSLLASCSYDGRIIIWKEGNQNEWSQAHIFDDHKTSVNSIAWAPHEVGLCLA 120
           VAWAHPKFG LLASCSYDGR+IIWKEGNQNEWSQAHIFDDHK+SVNSIAWAPHEVGLCLA
Sbjct: 61  VAWAHPKFGPLLASCSYDGRVIIWKEGNQNEWSQAHIFDDHKSSVNSIAWAPHEVGLCLA 120

Query: 121 CGSSDGNISVFIARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSTLLNPVQKLCS 180
           CGSSDGNISVF ARADGGWDTSRIDQAHPVGVTSVSWAPST PGALVGS LL+PVQKLCS
Sbjct: 121 CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTTPGALVGSALLDPVQKLCS 180

Query: 181 GGCDNTVKVWKLDNGVWKLDCFPALQMHSDWVRDVSWAPNFGLPKSTIASASQDGKVVIW 240
           GGCDNTVKVWKL NGVWK+DCFPALQMH+DWVRDVSWAPN GLPKSTIASASQDGKVVIW
Sbjct: 181 GGCDNTVKVWKLYNGVWKMDCFPALQMHTDWVRDVSWAPNLGLPKSTIASASQDGKVVIW 240

Query: 241 TVVGEGDEWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEVVDGDWQQVSTVE 300
           TVV EGD+WEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKE VDGDWQQVSTV+
Sbjct: 241 TVVKEGDQWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTVD 300

[Close]

BLAST of Sed0021194 vs. ExPASy TrEMBL
Match: A0A5D3CBF9 (Protein transport protein SEC13-like protein B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold323G00660 PE=3 SV=1)

HSP 1 Score: 601.7 bits (1550), Expect = 1.7e-168
Identity = 279/300 (93.00%), Postives = 287/300 (95.67%), Query Frame = 0


Query: 1   MQSQKIEIGHEDTIHDVAMDYYGKRVASASSDQTIKITSVSNSATQHLATLTGHLGPVWQ 60
           M  QKIE GH+DTIHDVAMDYYGKRVASASSDQTIKIT VSNSATQHLATLTGH GPVWQ
Sbjct: 1   MPGQKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGHQGPVWQ 60

Query: 61  VAWAHPKFGSLLASCSYDGRIIIWKEGNQNEWSQAHIFDDHKTSVNSIAWAPHEVGLCLA 120
           VAWAHPKFG LLASCSYDGR+IIWKEGNQNEWSQAHIFDDHK+SVNSIAWAPHEVGLCLA
Sbjct: 61  VAWAHPKFGPLLASCSYDGRVIIWKEGNQNEWSQAHIFDDHKSSVNSIAWAPHEVGLCLA 120

Query: 121 CGSSDGNISVFIARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSTLLNPVQKLCS 180
           CGSSDGNISVF ARADGGWDTSRIDQAHPVGVTSVSWAPST PGALVGS LL+PVQKLCS
Sbjct: 121 CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTTPGALVGSALLDPVQKLCS 180

Query: 181 GGCDNTVKVWKLDNGVWKLDCFPALQMHSDWVRDVSWAPNFGLPKSTIASASQDGKVVIW 240
           GGCDNTVKVWKL NGVWK+DCFPALQMH+DWVRDVSWAPN GLPKSTIASASQDGKVVIW
Sbjct: 181 GGCDNTVKVWKLYNGVWKMDCFPALQMHTDWVRDVSWAPNLGLPKSTIASASQDGKVVIW 240

Query: 241 TVVGEGDEWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEVVDGDWQQVSTVE 300
           TVV EGD+WEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKE VDGDWQQVSTV+
Sbjct: 241 TVVKEGDQWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTVD 300

[Close]

BLAST of Sed0021194 vs. TAIR 10
Match: AT2G30050.1 (transducin family protein / WD-40 repeat family protein )

HSP 1 Score: 533.9 bits (1374), Expect = 8.5e-152
Identity = 240/301 (79.73%), Postives = 272/301 (90.37%), Query Frame = 0


Query: 1   MQSQKIEIGHEDTIHDVAMDYYGKRVASASSDQTIKITSVSNS-ATQHLATLTGHLGPVW 60
           M  QKIE GHED +HDV MDYYGKR+A+ASSD TIKIT VSN+  +Q LATLTGH GPVW
Sbjct: 1   MPGQKIETGHEDIVHDVQMDYYGKRIATASSDCTIKITGVSNNGGSQQLATLTGHRGPVW 60

Query: 61  QVAWAHPKFGSLLASCSYDGRIIIWKEGNQNEWSQAHIFDDHKTSVNSIAWAPHEVGLCL 120
           +VAWAHPK+GS+LASCSYDG++I+WKEGNQN+W+Q H+F DHK+SVNSIAWAPH++GL L
Sbjct: 61  EVAWAHPKYGSILASCSYDGQVILWKEGNQNQWTQDHVFTDHKSSVNSIAWAPHDIGLSL 120

Query: 121 ACGSSDGNISVFIARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSTLLNPVQKLC 180
           ACGSSDGNISVF ARADGGWDTSRIDQAHPVGVTSVSWAP+TAPGALV S LL+PV KL 
Sbjct: 121 ACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPATAPGALVSSGLLDPVYKLA 180

Query: 181 SGGCDNTVKVWKLDNGVWKLDCFPALQMHSDWVRDVSWAPNFGLPKSTIASASQDGKVVI 240
           SGGCDNTVKVWKL NG WK+DCFPALQ H+DWVRDV+WAPN GLPKSTIAS SQDGKV+I
Sbjct: 181 SGGCDNTVKVWKLANGSWKMDCFPALQKHTDWVRDVAWAPNLGLPKSTIASGSQDGKVII 240

Query: 241 WTVVGEGDEWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEVVDGDWQQVSTV 300
           WTV  EG++WEGKVLKDF TPVWRVSWSLTGN+LAV+DGNNNV++WKE VDG+W+QV+ V
Sbjct: 241 WTVGKEGEQWEGKVLKDFMTPVWRVSWSLTGNLLAVSDGNNNVTVWKEAVDGEWEQVTAV 300

[Close]

BLAST of Sed0021194 vs. TAIR 10
Match: AT3G01340.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 530.8 bits (1366), Expect = 7.2e-151
Identity = 239/301 (79.40%), Postives = 270/301 (89.70%), Query Frame = 0


Query: 1   MQSQKIEIGHEDTIHDVAMDYYGKRVASASSDQTIKITSVSNS-ATQHLATLTGHLGPVW 60
           M  QKIE GH DTIHDV MDYYGKRVA+ASSD TIKIT VSNS  +QHLATLTGH GPVW
Sbjct: 1   MPPQKIETGHSDTIHDVVMDYYGKRVATASSDCTIKITGVSNSGGSQHLATLTGHRGPVW 60

Query: 61  QVAWAHPKFGSLLASCSYDGRIIIWKEGNQNEWSQAHIFDDHKTSVNSIAWAPHEVGLCL 120
           QVAWAHPKFGSLLASCSYDG+II+WKEGNQN+W+QAH+F DHK SVNSIAWAPHE+GL L
Sbjct: 61  QVAWAHPKFGSLLASCSYDGQIILWKEGNQNQWTQAHVFTDHKVSVNSIAWAPHELGLSL 120

Query: 121 ACGSSDGNISVFIARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSTLLNPVQKLC 180
           ACG+SDGNISVF ARADGGWDT++IDQAHPVGVTSVSWAP+T PGALV S +++PV KL 
Sbjct: 121 ACGASDGNISVFSARADGGWDTTKIDQAHPVGVTSVSWAPATEPGALVSSGMIDPVYKLA 180

Query: 181 SGGCDNTVKVWKLDNGVWKLDCFPALQMHSDWVRDVSWAPNFGLPKSTIASASQDGKVVI 240
           SGGCD+TVKVWK  NG WK+DCFPAL  H+DWVRDV+WAPN GLPKSTIAS S+DGKV+I
Sbjct: 181 SGGCDSTVKVWKFSNGSWKMDCFPALNKHTDWVRDVAWAPNLGLPKSTIASGSEDGKVII 240

Query: 241 WTVVGEGDEWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEVVDGDWQQVSTV 300
           WT+  EG++WEG VLKDFKTPVWRVSWSLTGN+LAV+DGNNNV++WKE VDG+W+QV+ V
Sbjct: 241 WTIGKEGEQWEGTVLKDFKTPVWRVSWSLTGNLLAVSDGNNNVTVWKESVDGEWEQVTVV 300

[Close]

BLAST of Sed0021194 vs. TAIR 10
Match: AT3G01340.2 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 530.8 bits (1366), Expect = 7.2e-151
Identity = 239/301 (79.40%), Postives = 270/301 (89.70%), Query Frame = 0


Query: 1   MQSQKIEIGHEDTIHDVAMDYYGKRVASASSDQTIKITSVSNS-ATQHLATLTGHLGPVW 60
           M  QKIE GH DTIHDV MDYYGKRVA+ASSD TIKIT VSNS  +QHLATLTGH GPVW
Sbjct: 1   MPPQKIETGHSDTIHDVVMDYYGKRVATASSDCTIKITGVSNSGGSQHLATLTGHRGPVW 60

Query: 61  QVAWAHPKFGSLLASCSYDGRIIIWKEGNQNEWSQAHIFDDHKTSVNSIAWAPHEVGLCL 120
           QVAWAHPKFGSLLASCSYDG+II+WKEGNQN+W+QAH+F DHK SVNSIAWAPHE+GL L
Sbjct: 61  QVAWAHPKFGSLLASCSYDGQIILWKEGNQNQWTQAHVFTDHKVSVNSIAWAPHELGLSL 120

Query: 121 ACGSSDGNISVFIARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSTLLNPVQKLC 180
           ACG+SDGNISVF ARADGGWDT++IDQAHPVGVTSVSWAP+T PGALV S +++PV KL 
Sbjct: 121 ACGASDGNISVFSARADGGWDTTKIDQAHPVGVTSVSWAPATEPGALVSSGMIDPVYKLA 180

Query: 181 SGGCDNTVKVWKLDNGVWKLDCFPALQMHSDWVRDVSWAPNFGLPKSTIASASQDGKVVI 240
           SGGCD+TVKVWK  NG WK+DCFPAL  H+DWVRDV+WAPN GLPKSTIAS S+DGKV+I
Sbjct: 181 SGGCDSTVKVWKFSNGSWKMDCFPALNKHTDWVRDVAWAPNLGLPKSTIASGSEDGKVII 240

Query: 241 WTVVGEGDEWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEVVDGDWQQVSTV 300
           WT+  EG++WEG VLKDFKTPVWRVSWSLTGN+LAV+DGNNNV++WKE VDG+W+QV+ V
Sbjct: 241 WTIGKEGEQWEGTVLKDFKTPVWRVSWSLTGNLLAVSDGNNNVTVWKESVDGEWEQVTVV 300

[Close]

BLAST of Sed0021194 vs. TAIR 10
Match: AT1G64350.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 81.6 bits (200), Expect = 1.2e-15
Identity = 73/306 (23.86%), Postives = 133/306 (43.46%), Query Frame = 0


Query: 23  GKRVASASSDQTIKI--TSVSNSAT-QHLATLTGHLGPVWQVAWAHPKFGSLLASCSYDG 82
           G R+A+ S +  + I  +S S+S+T    + +      + ++ W   ++G  +A    DG
Sbjct: 21  GDRLAAGSLNGKLSIYESSTSSSSTFSCTSKVRVSESSIVKIVWLPSEYGDAVACVCEDG 80

Query: 83  RIIIWKEGNQN----EWSQAHIFDDHKTSVNSIAWAPHEVGLCLACGSSDGNISVFIARA 142
            + IW+E +++    EW       +  + V  + +      L +    SDG + VF    
Sbjct: 81  SLSIWEELSEDAHGLEWKLCKSMKNKSSQVLDVQFGVSRKSLKMVAAYSDGYLRVFELLN 140

Query: 143 DGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSTLLNPVQK-------LCSGGCD---- 202
                  ++       + S+S      P +L  S   NP++        + +   D    
Sbjct: 141 PLELKNWQLQAEFQNVIDSLSTLGK--PSSLSASVSWNPMKGEEQEPSFVLAFNSDSPHL 200

Query: 203 NTVKVWKLD--NGVWKLDCFPAL-QMHSDWVRDVSWAPNFGLPKSTIASASQDGKVVIWT 262
           N+ K+W+ D  +  W      AL +   D V  +SWAPN G P   +A A+  G + IW 
Sbjct: 201 NSSKIWEFDEAHNRWLAVAELALPEDKGDPVYALSWAPNIGRPYEVVAVATHKG-IGIWH 260

Query: 263 VVGEGDEWEGKV-------LKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEVVDGDWQ 301
            VG   + EG++       L   +  VW++ W ++G  LA    +  V LW+  ++G+W 
Sbjct: 261 -VGLAPDLEGRLPVKKVSSLSGHQGEVWQMEWDMSGMTLASTGSDGMVKLWQSNLNGEWH 320

[Close]

BLAST of Sed0021194 vs. TAIR 10
Match: AT2G26060.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 80.5 bits (197), Expect = 2.6e-15
Identity = 66/250 (26.40%), Postives = 105/250 (42.00%), Query Frame = 0


Query: 1   MQSQKIEIGHEDTIHDVA-------MDYYGKRVASASSDQTIKI---TSVSNSATQHLAT 60
           ++ QK+E GH D +  VA        D     +AS S D T++I   +S+S S T     
Sbjct: 11  VEIQKLE-GHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLSRSWTCKTVL 70

Query: 61  LTGHLGPVWQVAWAHPKFGSLLASCSYDGRIIIWKEGNQNEWSQAHIFDDHKTSVNSIAW 120
              H   V   AW+    G LLA+ S+DG   IWK    +E+      + H+  V S++W
Sbjct: 71  EETHTRTVRSCAWS--PSGQLLATASFDGTTGIWKNYG-SEFECISTLEGHENEVKSVSW 130

Query: 121 APHEVGLCLACGSSDGNISVFIARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGST 180
             +  G CLA  S D ++ ++       +D + +   H   V  V W P+          
Sbjct: 131 --NASGSCLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHPT---------- 190

Query: 181 LLNPVQKLCSGGCDNTVKVWKLDNGVWKLDCFPALQMHSDWVRDVSWAPNFGLPKSTIAS 240
               +  L S   DNT+KVW  ++   +  C   L   ++      W+ +F      + +
Sbjct: 191 ----MDVLFSCSYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVWSISFNAAGDKMVT 240

The following BLAST results are available for this feature:

BLAST of Sed0021194 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7018318.1	3.8e-170	94.00	Protein transport protein SEC13-like B, partial [Cucurbita argyrosperma subsp. a...	[more]
XP_023528381.1	3.8e-170	94.00	protein transport protein SEC13 homolog B [Cucurbita pepo subsp. pepo] >XP_02352...	[more]
XP_022980068.1	1.9e-169	93.67	protein transport protein SEC13 homolog B [Cucurbita maxima] >XP_022980069.1 pro...	[more]
XP_022955988.1	3.2e-169	93.67	protein transport protein SEC13 homolog B [Cucurbita moschata] >XP_022955989.1 p...	[more]
XP_004150601.1	7.2e-169	93.67	protein transport protein SEC13 homolog B [Cucumis sativus] >KGN58046.1 hypothet...	[more]

BLAST of Sed0021194 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O64740	1.2e-150	79.73	Protein transport protein SEC13 homolog B OS=Arabidopsis thaliana OX=3702 GN=SEC...	[more]
Q9SRI1	1.0e-149	79.40	Protein transport protein SEC13 homolog A OS=Arabidopsis thaliana OX=3702 GN=SEC...	[more]
Q9D1M0	1.6e-91	52.51	Protein SEC13 homolog OS=Mus musculus OX=10090 GN=Sec13 PE=1 SV=3	[more]
Q5XFW8	1.6e-91	52.51	Protein SEC13 homolog OS=Rattus norvegicus OX=10116 GN=Sec13 PE=1 SV=1	[more]
Q3ZCC9	6.2e-91	52.51	Protein SEC13 homolog OS=Bos taurus OX=9913 GN=SEC13 PE=2 SV=1	[more]

BLAST of Sed0021194 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IY63	9.1e-170	93.67	protein transport protein SEC13 homolog B OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1GWL3	1.6e-169	93.67	protein transport protein SEC13 homolog B OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A0A0LDB9	3.5e-169	93.67	WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G...	[more]
A0A1S4DWT1	1.7e-168	93.00	protein transport protein SEC13 homolog B OS=Cucumis melo OX=3656 GN=LOC10348996...	[more]
A0A5D3CBF9	1.7e-168	93.00	Protein transport protein SEC13-like protein B OS=Cucumis melo var. makuwa OX=11...	[more]

BLAST of Sed0021194 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G30050.1	8.5e-152	79.73	transducin family protein / WD-40 repeat family protein	[more]
AT3G01340.1	7.2e-151	79.40	Transducin/WD40 repeat-like superfamily protein	[more]
AT3G01340.2	7.2e-151	79.40	Transducin/WD40 repeat-like superfamily protein	[more]
AT1G64350.1	1.2e-15	23.86	Transducin/WD40 repeat-like superfamily protein	[more]
AT2G26060.1	2.6e-15	26.40	Transducin/WD40 repeat-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020472	G-protein beta WD-40 repeat	PRINTS	PR00320	GPROTEINBRPT	coord: 178..192 score: 38.48 coord: 72..86 score: 36.22 coord: 228..242 score: 32.33
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 44..85 e-value: 5.2E-7 score: 39.3 coord: 91..132 e-value: 0.018 score: 24.2 coord: 198..241 e-value: 9.2E-4 score: 28.5 coord: 138..191 e-value: 0.026 score: 23.7 coord: 247..286 e-value: 0.052 score: 22.7 coord: 1..39 e-value: 0.14 score: 21.3
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 146..191 e-value: 0.028 score: 15.3 coord: 94..130 e-value: 0.05 score: 14.5 coord: 5..37 e-value: 0.011 score: 16.5 coord: 206..240 e-value: 0.078 score: 13.9 coord: 46..85 e-value: 2.3E-5 score: 25.1
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 51..85 score: 9.840087
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 205..242 score: 10.675542
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 1..301 e-value: 8.1E-98 score: 329.3
IPR037363	Sec13/Seh1 family	PANTHER	PTHR11024	NUCLEAR PORE COMPLEX PROTEIN SEC13 / SEH1 FAMILY MEMBER	coord: 1..300
None	No IPR available	PANTHER	PTHR11024:SF16	PROTEIN TRANSPORT PROTEIN SEC13 HOMOLOG B-LIKE	coord: 1..300
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 205..242 score: 8.966513
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 8..286

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0021194.1	Sed0021194.1	mRNA
Sed0021194.2	Sed0021194.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090114	COPII-coated vesicle budding
biological_process	GO:0006606	protein import into nucleus
cellular_component	GO:0030127	COPII vesicle coat
cellular_component	GO:0031080	nuclear pore outer ring
molecular_function	GO:0005515	protein binding
molecular_function	GO:0005198	structural molecule activity