Sed0021041 (gene) Chayote v1

Overview


Name	Sed0021041
Type	gene
Organism	Sechium edule (Chayote v1)
Description	CUE domain-containing protein
Location	LG05: 27825871 .. 27828977 (-)
RNA-Seq Expression	Sed0021041
Synteny	Sed0021041

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACGAAATTAAAAAGACAAAAAAGTAAAATTTCCCAGTTTTTAATAGTATTTTAGTCTCTAACCCTGGTTTAAAATTGAAGTAAACACTAACCCGAAAGAATTCAAAATCTTTCATTCCCTTCTTCTTCTTTTTCTTCTTCTTGTCCAAGCAAACTCCCTTTCCTAACCCTAATCCGTCTTCCTTTTATCTTCCTCGTCTCGAATTTCTGTTCGGATTTCAATTGGAGTTTGCTTCGGTGATTGTAGGGTTTAGATTCTGCAAATCGACAACCGGAAGACGATGTCTGCTGTTGTGTGCGGAACCAAGAGATCCTTCTTTGAAGAACTCCCGCCTTCGCCTCCCATTGCCAAGCGCCATCGCTGCTCCTCCTCTTCTTCTTCTCCGATTAGATTCCCCGCCCCTTCTCCCCTTCATCACTTACAGGATTTGTTTCCCGACATGGATCATCAGGTTTCTTTTCTTTTCTTTTTATTGATTTCCCTTCAATTTGAGAAACTGTGGCTCTCCGTTTGTTTTATGCTTATTTCACTGCATTGTAACTTGAATTTACGTGGGCTTTTGTGACAAAGGCTGCAGGTAGATGTGGACCTTAAGAAAATCGTGTTATTTTCTTCTTTTTGTATGGAATATTTTTATGTGCTTCTGGATTATGTGTAATATGAAAGTTATTTCGTCCTCAAGGAGTGGCATAGTAGTTGAAGACTTGGGATTTGAGGGTATGCTCCCCTCAAGGTCCCAGGTTCGAGACTTAGCTGTGACATTACTTATTCAATGTCTTCCGGTGCCTGCCCTAGGAACAGGCATGGTTACTAAATTCAGGAGGGGTTTAATCGGGTTTAATCTTGTGAGCATCTCTTTCGTTGTCTTTTTGACAACTGTTGCATGTATGTTATAATTAATGCTATTGGTTTTTTTTTTATTTTTATATATTGATAGTTAATTGTTTGATTTTGCCTTTCAGCTTCTTCTTAGAGCCCTTGAAGAATGTGGCAACGACTTGGATGCGGCTATCAAGAGTCTGAGTGACCTGCGTTTGAGATCTGCTGTTGAGAATCCTGTTGCTACTTCAGAAGCAGAGACGAACTTGGACCAAGGTATCTATCACATACTGCCAAATAATTCAGGAGATTTCTTGTTTATTGCAATGATAAATTCATGGTTGGATTCTTTGTTCAAGGAAAGGAAGTTTTAACTTTTAGATGAAACTATGCGATAGAGTCAAACTATTCTAACTCTATCTCAAGGTCCCTCAATCGAGTGATCAATTCAATATGGAAGTAGTTGTTCATTAGGAGGAAAAGAGTACACTTATATAGCCCTTTATGGGCTAGCTAACTACCCAAGTGTAATCTTCTAACTATCTAATAAGGGCCTATTAAAGGATCCCATCACTATGGGTGTTGAGAAATATAGGTCTCAATTAGGTTGTGATGCATGCTTATTTCATGGAAGAGATCTCCTTGTCCAGGACCCAGGTTCGAGGAAGGTTTAAGTTTTGACTTAGAAACGAGAAACATATCTCTCATTTAGGCATCCATTCTCTTAGAGTGATTTATTCTTTTCTTGTGGAAGAAACTCAATGGTTCCCTGCTTACCTTGCTGTTTGTAGTTTTGTTTGACAAGCATATGTTTTCGGAATTGGCTGGTGCATATAGTTAACCGTGGGAAAAAGGACCTTCATTCTGAATTGTTGGAGATAAAGTTGTGCAAGGAGTTTTTATATTCTTTAATTCTATTGTTGTTGATGCTGTATTGCCCCTGATCTAGTTTGGTCATCTGTTTCTATGCCTTACAACGCTATTTATTGTTACTAATAATTTGTATTAATGTTGAACTTTGCTTCTTGTATTTTCTGCTTAGGACACTGTTCAAAATTTTGCTATTCTTGAACTTTATTCATTTTTTCTTTCTCGTAAATATCAATAATTCAAACTACGTTTAAAAAACTTTTAGGTACATTTGCTAAGGATGGAGAGGCTGCTGCTTCTGAGAATTTGTCGGCACCAAGCAGTGTCTCTCTTGATGGTAGGGAATGGGTTGACTTGTTTGTAAGGGAAATGATGAGTGCTACTAGTGTAGATGATGCTAGAACTCGTGCAGCCAGAGCTTTAGAGACTTTAGAGAGCTCAATTCGTGCGCGTGCTGGTGCCAATGCCGAACAAAATGTTCACAAGGTACTTCAACTTTAATGCTCACTAACACGAATGAACTTTCCATATTCTTGGGGGACAATTTTGGGATTCTGTTGGGTTTTGGAGAATTTGAAAGCACAGTTATAATTTGTGTAGGCTTATTCACTTATCAACTATGCAGTTGTTAACTCGTGCTCTTTTCGGTATCCACCAGGAAAACATGCAACTGAAGGAACAAATTGGAGTACTACTACGAGAAAATACAATTCTTAAGCGAGCGGTTGCCATACAACATGAACGACAAAAGGAATTCGACAATAAGAACCTAGAATTGCAGCACCTTAAACAGTTGGTATCTCAATATCAGGAACAGATGAGAACGCTAGAGGTTAGATTAAACTATAGAACTTTTCTAATTATCTTCCCCAGTTTTAGCAGACCTGTTTGAAATTCTTAAACAGATTCAAGTTGATGCCACTTTTTTCTAACCAGTTGATAACAACTTATTGGTTTTGTTATTACAGATAAGCAATTATGCATTGACAATGCATTTGAACCAGGCTCAACAAAGCAGCTCGATTCCCGGACGCTTCCATCCCGATATCTTCTAGCAAGGAGGAGAGTAAAGATCTATATTATTGCTTTGCAGAAAGATAGTAGTAGATCGCGAGGGAGAGGAGGAAAGGAGGGAGAGCAGTGTGGAAGGAGCATTGTCCATTACGGTCTCAGTTTCCTATGATGAATAGATGTATTGATGAATCAGTGTGTTTGTTTCTGTAGTTTGAGTTTGGTCAGATAGTCAACCTTGAATGGTGACTGCATTGTTTCCCCATGATTTTCAATAAAGTTGCTTGTTCAATTTGATGAATTTTGGGGGTTTTGTTACGATCTGGAAAGTCACTTTTTTTGTTAAATTTGTGTAAGCTGGTCCAGACACAATAATATATATGTATAAATATAGAATTTGGACGGTA

mRNA sequence

ACGAAATTAAAAAGACAAAAAAGTAAAATTTCCCAGTTTTTAATAGTATTTTAGTCTCTAACCCTGGTTTAAAATTGAAGTAAACACTAACCCGAAAGAATTCAAAATCTTTCATTCCCTTCTTCTTCTTTTTCTTCTTCTTGTCCAAGCAAACTCCCTTTCCTAACCCTAATCCGTCTTCCTTTTATCTTCCTCGTCTCGAATTTCTGTTCGGATTTCAATTGGAGTTTGCTTCGGTGATTGTAGGGTTTAGATTCTGCAAATCGACAACCGGAAGACGATGTCTGCTGTTGTGTGCGGAACCAAGAGATCCTTCTTTGAAGAACTCCCGCCTTCGCCTCCCATTGCCAAGCGCCATCGCTGCTCCTCCTCTTCTTCTTCTCCGATTAGATTCCCCGCCCCTTCTCCCCTTCATCACTTACAGGATTTGTTTCCCGACATGGATCATCAGCTTCTTCTTAGAGCCCTTGAAGAATGTGGCAACGACTTGGATGCGGCTATCAAGAGTCTGAGTGACCTGCGTTTGAGATCTGCTGTTGAGAATCCTGTTGCTACTTCAGAAGCAGAGACGAACTTGGACCAAGGTACATTTGCTAAGGATGGAGAGGCTGCTGCTTCTGAGAATTTGTCGGCACCAAGCAGTGTCTCTCTTGATGGTAGGGAATGGGTTGACTTGTTTGTAAGGGAAATGATGAGTGCTACTAGTGTAGATGATGCTAGAACTCGTGCAGCCAGAGCTTTAGAGACTTTAGAGAGCTCAATTCGTGCGCGTGCTGGTGCCAATGCCGAACAAAATGTTCACAAGGAAAACATGCAACTGAAGGAACAAATTGGAGTACTACTACGAGAAAATACAATTCTTAAGCGAGCGGTTGCCATACAACATGAACGACAAAAGGAATTCGACAATAAGAACCTAGAATTGCAGCACCTTAAACAGTTGGTATCTCAATATCAGGAACAGATGAGAACGCTAGAGATAAGCAATTATGCATTGACAATGCATTTGAACCAGGCTCAACAAAGCAGCTCGATTCCCGGACGCTTCCATCCCGATATCTTCTAGCAAGGAGGAGAGTAAAGATCTATATTATTGCTTTGCAGAAAGATAGTAGTAGATCGCGAGGGAGAGGAGGAAAGGAGGGAGAGCAGTGTGGAAGGAGCATTGTCCATTACGGTCTCAGTTTCCTATGATGAATAGATGTATTGATGAATCAGTGTGTTTGTTTCTGTAGTTTGAGTTTGGTCAGATAGTCAACCTTGAATGGTGACTGCATTGTTTCCCCATGATTTTCAATAAAGTTGCTTGTTCAATTTGATGAATTTTGGGGGTTTTGTTACGATCTGGAAAGTCACTTTTTTTGTTAAATTTGTGTAAGCTGGTCCAGACACAATAATATATATGTATAAATATAGAATTTGGACGGTA

Coding sequence (CDS)

ATGTCTGCTGTTGTGTGCGGAACCAAGAGATCCTTCTTTGAAGAACTCCCGCCTTCGCCTCCCATTGCCAAGCGCCATCGCTGCTCCTCCTCTTCTTCTTCTCCGATTAGATTCCCCGCCCCTTCTCCCCTTCATCACTTACAGGATTTGTTTCCCGACATGGATCATCAGCTTCTTCTTAGAGCCCTTGAAGAATGTGGCAACGACTTGGATGCGGCTATCAAGAGTCTGAGTGACCTGCGTTTGAGATCTGCTGTTGAGAATCCTGTTGCTACTTCAGAAGCAGAGACGAACTTGGACCAAGGTACATTTGCTAAGGATGGAGAGGCTGCTGCTTCTGAGAATTTGTCGGCACCAAGCAGTGTCTCTCTTGATGGTAGGGAATGGGTTGACTTGTTTGTAAGGGAAATGATGAGTGCTACTAGTGTAGATGATGCTAGAACTCGTGCAGCCAGAGCTTTAGAGACTTTAGAGAGCTCAATTCGTGCGCGTGCTGGTGCCAATGCCGAACAAAATGTTCACAAGGAAAACATGCAACTGAAGGAACAAATTGGAGTACTACTACGAGAAAATACAATTCTTAAGCGAGCGGTTGCCATACAACATGAACGACAAAAGGAATTCGACAATAAGAACCTAGAATTGCAGCACCTTAAACAGTTGGTATCTCAATATCAGGAACAGATGAGAACGCTAGAGATAAGCAATTATGCATTGACAATGCATTTGAACCAGGCTCAACAAAGCAGCTCGATTCCCGGACGCTTCCATCCCGATATCTTCTAG

Protein sequence

MSAVVCGTKRSFFEELPPSPPIAKRHRCSSSSSSPIRFPAPSPLHHLQDLFPDMDHQLLLRALEECGNDLDAAIKSLSDLRLRSAVENPVATSEAETNLDQGTFAKDGEAAASENLSAPSSVSLDGREWVDLFVREMMSATSVDDARTRAARALETLESSIRARAGANAEQNVHKENMQLKEQIGVLLRENTILKRAVAIQHERQKEFDNKNLELQHLKQLVSQYQEQMRTLEISNYALTMHLNQAQQSSSIPGRFHPDIF

Homology

[Close]

BLAST of Sed0021041 vs. NCBI nr
Match: XP_022153492.1 (uncharacterized protein LOC111020986 [Momordica charantia])

HSP 1 Score: 418.3 bits (1074), Expect = 4.8e-113
Identity = 224/261 (85.82%), Postives = 238/261 (91.19%), Query Frame = 0


Query: 1   MSAVVCGTKRSFFEELPPSPPIAKRHRCSSSSSSPIRFPAPSPLHHLQDLFPDMDHQLLL 60
           MSAVVCGTKRSFFEELPPSPPIAKR RC S+S+SPIRF APS +  L DLFP MDHQLL 
Sbjct: 1   MSAVVCGTKRSFFEELPPSPPIAKRLRC-STSTSPIRFAAPSLIDQLHDLFPHMDHQLLA 60

Query: 61  RALEECGNDLDAAIKSLSDLRLRSAVENPVATSEAETNLDQGTFAKDGEAAASENLSAPS 120
           RALEECGNDLDAAIK LSDL L SA ENP AT+E ETNLDQG+F  DGEAAASENLSAPS
Sbjct: 61  RALEECGNDLDAAIKCLSDLCLGSAAENPGATAEPETNLDQGSFVNDGEAAASENLSAPS 120

Query: 121 SVSLDGREWVDLFVREMMSATSVDDARTRAARALETLESSIRARAGANAEQNVHKENMQL 180
           SVSLDGREWVDLFVREMMSATSVDDARTRAARALE LE+SI ARAGA+A QN HKEN+QL
Sbjct: 121 SVSLDGREWVDLFVREMMSATSVDDARTRAARALEALENSISARAGADAVQNFHKENIQL 180

Query: 181 KEQIGVLLRENTILKRAVAIQHERQKEFDNKNLELQHLKQLVSQYQEQMRTLEISNYALT 240
           KEQI VL+RENTILKRAV+IQHERQKEFD+KNLELQHLKQLVSQYQEQ+RTLEI+NYALT
Sbjct: 181 KEQIEVLIRENTILKRAVSIQHERQKEFDDKNLELQHLKQLVSQYQEQLRTLEINNYALT 240

Query: 241 MHLNQAQQSSSIPGRFHPDIF 262
           MHL QAQQSSSIPGRFHPD+F
Sbjct: 241 MHLKQAQQSSSIPGRFHPDVF 260

[Close]

BLAST of Sed0021041 vs. NCBI nr
Match: XP_022949480.1 (uncharacterized protein LOC111452812 isoform X2 [Cucurbita moschata])

HSP 1 Score: 413.3 bits (1061), Expect = 1.6e-111
Identity = 220/261 (84.29%), Postives = 239/261 (91.57%), Query Frame = 0


Query: 1   MSAVVCGTKRSFFEELPPSPPIAKRHRCSSSSSSPIRFPAPSPLHHLQDLFPDMDHQLLL 60
           MSAVVCGTKRSFFEELPPSPP++KR RC SS++SPIRF A   +  LQ+LFP MDHQLL+
Sbjct: 1   MSAVVCGTKRSFFEELPPSPPVSKRLRC-SSTTSPIRFAASCLIDQLQNLFPQMDHQLLV 60

Query: 61  RALEECGNDLDAAIKSLSDLRLRSAVENPVATSEAETNLDQGTFAKDGEAAASENLSAPS 120
           R LEECGNDLDAAIKSLS++ L S VENPVAT+ AETNLDQG+FA +GE AASENLSAPS
Sbjct: 61  RVLEECGNDLDAAIKSLSNMCLGSTVENPVATTAAETNLDQGSFADNGEPAASENLSAPS 120

Query: 121 SVSLDGREWVDLFVREMMSATSVDDARTRAARALETLESSIRARAGANAEQNVHKENMQL 180
           SVSLDGREWVDLFVREMMSATSVDDARTRAARALE LESSI ARAGA+A QN HKENMQL
Sbjct: 121 SVSLDGREWVDLFVREMMSATSVDDARTRAARALEALESSISARAGADAAQNFHKENMQL 180

Query: 181 KEQIGVLLRENTILKRAVAIQHERQKEFDNKNLELQHLKQLVSQYQEQMRTLEISNYALT 240
           KEQI VLLRENTILKRAVAIQHERQKEF++KNLELQHLKQLVSQYQEQ+RTLE++NYALT
Sbjct: 181 KEQIEVLLRENTILKRAVAIQHERQKEFEDKNLELQHLKQLVSQYQEQLRTLEVNNYALT 240

Query: 241 MHLNQAQQSSSIPGRFHPDIF 262
           MHL QAQQSSSIPGRFHPD+F
Sbjct: 241 MHLKQAQQSSSIPGRFHPDVF 260

[Close]

BLAST of Sed0021041 vs. NCBI nr
Match: XP_023525880.1 (uncharacterized protein LOC111789361 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 411.8 bits (1057), Expect = 4.5e-111
Identity = 219/261 (83.91%), Postives = 239/261 (91.57%), Query Frame = 0


Query: 1   MSAVVCGTKRSFFEELPPSPPIAKRHRCSSSSSSPIRFPAPSPLHHLQDLFPDMDHQLLL 60
           MSAVVCGTKRSFFEELPPSPP++KR RC SS++SPIRF A   +  LQ+LFP MDHQLL+
Sbjct: 1   MSAVVCGTKRSFFEELPPSPPVSKRLRC-SSTTSPIRFAASCLIDQLQNLFPQMDHQLLV 60

Query: 61  RALEECGNDLDAAIKSLSDLRLRSAVENPVATSEAETNLDQGTFAKDGEAAASENLSAPS 120
           R LEECGNDLDAAIKSLS++ L S VENPVAT+ AETNLDQG+FA +GE AASENLSAP+
Sbjct: 61  RVLEECGNDLDAAIKSLSNMCLGSTVENPVATTAAETNLDQGSFADNGEPAASENLSAPT 120

Query: 121 SVSLDGREWVDLFVREMMSATSVDDARTRAARALETLESSIRARAGANAEQNVHKENMQL 180
           SVSLDGREWVDLFVREMMSATSVDDARTRAARALE LESSI ARAGA+A QN HKENMQL
Sbjct: 121 SVSLDGREWVDLFVREMMSATSVDDARTRAARALEALESSISARAGADAAQNSHKENMQL 180

Query: 181 KEQIGVLLRENTILKRAVAIQHERQKEFDNKNLELQHLKQLVSQYQEQMRTLEISNYALT 240
           KEQI VLLRENTILKRAVAIQHERQKEF++KNLELQHLKQLVSQYQEQ+RTLE++NYALT
Sbjct: 181 KEQIEVLLRENTILKRAVAIQHERQKEFEDKNLELQHLKQLVSQYQEQLRTLEVNNYALT 240

Query: 241 MHLNQAQQSSSIPGRFHPDIF 262
           MHL QAQQSSSIPGRFHPD+F
Sbjct: 241 MHLKQAQQSSSIPGRFHPDVF 260

[Close]

BLAST of Sed0021041 vs. NCBI nr
Match: XP_022998357.1 (uncharacterized protein LOC111493023 [Cucurbita maxima])

HSP 1 Score: 407.5 bits (1046), Expect = 8.5e-110
Identity = 217/261 (83.14%), Postives = 237/261 (90.80%), Query Frame = 0


Query: 1   MSAVVCGTKRSFFEELPPSPPIAKRHRCSSSSSSPIRFPAPSPLHHLQDLFPDMDHQLLL 60
           MSAVVCGTKRSFFEELPPSPP++KR RC SS++SPIRF A   +  LQ+LFP MDHQLL+
Sbjct: 1   MSAVVCGTKRSFFEELPPSPPVSKRLRC-SSTTSPIRFAASCLIDQLQNLFPQMDHQLLV 60

Query: 61  RALEECGNDLDAAIKSLSDLRLRSAVENPVATSEAETNLDQGTFAKDGEAAASENLSAPS 120
           R LEECGNDLDAAIKSLS++ L S VENPVAT+ AETNLDQG+FA +GE AASENLSAPS
Sbjct: 61  RVLEECGNDLDAAIKSLSNMCLGSTVENPVATTPAETNLDQGSFADNGEPAASENLSAPS 120

Query: 121 SVSLDGREWVDLFVREMMSATSVDDARTRAARALETLESSIRARAGANAEQNVHKENMQL 180
            VSLDGREWVDLFVREMMSATSV+DARTRAARALE LESSI ARAGA+A QN HKEN QL
Sbjct: 121 RVSLDGREWVDLFVREMMSATSVEDARTRAARALEALESSISARAGADAAQNFHKENTQL 180

Query: 181 KEQIGVLLRENTILKRAVAIQHERQKEFDNKNLELQHLKQLVSQYQEQMRTLEISNYALT 240
           KEQI VLLRENTILKRAVAIQHERQKEF++KNLELQHLKQLVSQYQEQ+RTLE++NYALT
Sbjct: 181 KEQIEVLLRENTILKRAVAIQHERQKEFEDKNLELQHLKQLVSQYQEQLRTLEVNNYALT 240

Query: 241 MHLNQAQQSSSIPGRFHPDIF 262
           MHL QAQQSSSIPGRFHPD+F
Sbjct: 241 MHLKQAQQSSSIPGRFHPDVF 260

[Close]

BLAST of Sed0021041 vs. NCBI nr
Match: XP_022949479.1 (uncharacterized protein LOC111452812 isoform X1 [Cucurbita moschata])

HSP 1 Score: 406.8 bits (1044), Expect = 1.5e-109
Identity = 219/262 (83.59%), Postives = 238/262 (90.84%), Query Frame = 0


Query: 1   MSAVVCGTKRSFFEELPPSPPIAKRHRCSSSSSSPIRFPAPSPLHHLQDLFPDMDHQLLL 60
           MSAVVCGTKRSFFEELPPSPP++KR RC SS++SPIRF A   +  LQ+LFP MDHQLL+
Sbjct: 1   MSAVVCGTKRSFFEELPPSPPVSKRLRC-SSTTSPIRFAASCLIDQLQNLFPQMDHQLLV 60

Query: 61  RALEECGNDLDAAIKSLSDLRLRSAVENPVATSEAETNLDQ-GTFAKDGEAAASENLSAP 120
           R LEECGNDLDAAIKSLS++ L S VENPVAT+ AETNLD  G+FA +GE AASENLSAP
Sbjct: 61  RVLEECGNDLDAAIKSLSNMCLGSTVENPVATTAAETNLDHGGSFADNGEPAASENLSAP 120

Query: 121 SSVSLDGREWVDLFVREMMSATSVDDARTRAARALETLESSIRARAGANAEQNVHKENMQ 180
           SSVSLDGREWVDLFVREMMSATSVDDARTRAARALE LESSI ARAGA+A QN HKENMQ
Sbjct: 121 SSVSLDGREWVDLFVREMMSATSVDDARTRAARALEALESSISARAGADAAQNFHKENMQ 180

Query: 181 LKEQIGVLLRENTILKRAVAIQHERQKEFDNKNLELQHLKQLVSQYQEQMRTLEISNYAL 240
           LKEQI VLLRENTILKRAVAIQHERQKEF++KNLELQHLKQLVSQYQEQ+RTLE++NYAL
Sbjct: 181 LKEQIEVLLRENTILKRAVAIQHERQKEFEDKNLELQHLKQLVSQYQEQLRTLEVNNYAL 240

Query: 241 TMHLNQAQQSSSIPGRFHPDIF 262
           TMHL QAQQSSSIPGRFHPD+F
Sbjct: 241 TMHLKQAQQSSSIPGRFHPDVF 261

[Close]

BLAST of Sed0021041 vs. ExPASy TrEMBL
Match: A0A6J1DJ22 (uncharacterized protein LOC111020986 OS=Momordica charantia OX=3673 GN=LOC111020986 PE=4 SV=1)

HSP 1 Score: 418.3 bits (1074), Expect = 2.3e-113
Identity = 224/261 (85.82%), Postives = 238/261 (91.19%), Query Frame = 0


Query: 1   MSAVVCGTKRSFFEELPPSPPIAKRHRCSSSSSSPIRFPAPSPLHHLQDLFPDMDHQLLL 60
           MSAVVCGTKRSFFEELPPSPPIAKR RC S+S+SPIRF APS +  L DLFP MDHQLL 
Sbjct: 1   MSAVVCGTKRSFFEELPPSPPIAKRLRC-STSTSPIRFAAPSLIDQLHDLFPHMDHQLLA 60

Query: 61  RALEECGNDLDAAIKSLSDLRLRSAVENPVATSEAETNLDQGTFAKDGEAAASENLSAPS 120
           RALEECGNDLDAAIK LSDL L SA ENP AT+E ETNLDQG+F  DGEAAASENLSAPS
Sbjct: 61  RALEECGNDLDAAIKCLSDLCLGSAAENPGATAEPETNLDQGSFVNDGEAAASENLSAPS 120

Query: 121 SVSLDGREWVDLFVREMMSATSVDDARTRAARALETLESSIRARAGANAEQNVHKENMQL 180
           SVSLDGREWVDLFVREMMSATSVDDARTRAARALE LE+SI ARAGA+A QN HKEN+QL
Sbjct: 121 SVSLDGREWVDLFVREMMSATSVDDARTRAARALEALENSISARAGADAVQNFHKENIQL 180

Query: 181 KEQIGVLLRENTILKRAVAIQHERQKEFDNKNLELQHLKQLVSQYQEQMRTLEISNYALT 240
           KEQI VL+RENTILKRAV+IQHERQKEFD+KNLELQHLKQLVSQYQEQ+RTLEI+NYALT
Sbjct: 181 KEQIEVLIRENTILKRAVSIQHERQKEFDDKNLELQHLKQLVSQYQEQLRTLEINNYALT 240

Query: 241 MHLNQAQQSSSIPGRFHPDIF 262
           MHL QAQQSSSIPGRFHPD+F
Sbjct: 241 MHLKQAQQSSSIPGRFHPDVF 260

[Close]

BLAST of Sed0021041 vs. ExPASy TrEMBL
Match: A0A6J1GCW0 (uncharacterized protein LOC111452812 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111452812 PE=4 SV=1)

HSP 1 Score: 413.3 bits (1061), Expect = 7.5e-112
Identity = 220/261 (84.29%), Postives = 239/261 (91.57%), Query Frame = 0


Query: 1   MSAVVCGTKRSFFEELPPSPPIAKRHRCSSSSSSPIRFPAPSPLHHLQDLFPDMDHQLLL 60
           MSAVVCGTKRSFFEELPPSPP++KR RC SS++SPIRF A   +  LQ+LFP MDHQLL+
Sbjct: 1   MSAVVCGTKRSFFEELPPSPPVSKRLRC-SSTTSPIRFAASCLIDQLQNLFPQMDHQLLV 60

Query: 61  RALEECGNDLDAAIKSLSDLRLRSAVENPVATSEAETNLDQGTFAKDGEAAASENLSAPS 120
           R LEECGNDLDAAIKSLS++ L S VENPVAT+ AETNLDQG+FA +GE AASENLSAPS
Sbjct: 61  RVLEECGNDLDAAIKSLSNMCLGSTVENPVATTAAETNLDQGSFADNGEPAASENLSAPS 120

Query: 121 SVSLDGREWVDLFVREMMSATSVDDARTRAARALETLESSIRARAGANAEQNVHKENMQL 180
           SVSLDGREWVDLFVREMMSATSVDDARTRAARALE LESSI ARAGA+A QN HKENMQL
Sbjct: 121 SVSLDGREWVDLFVREMMSATSVDDARTRAARALEALESSISARAGADAAQNFHKENMQL 180

Query: 181 KEQIGVLLRENTILKRAVAIQHERQKEFDNKNLELQHLKQLVSQYQEQMRTLEISNYALT 240
           KEQI VLLRENTILKRAVAIQHERQKEF++KNLELQHLKQLVSQYQEQ+RTLE++NYALT
Sbjct: 181 KEQIEVLLRENTILKRAVAIQHERQKEFEDKNLELQHLKQLVSQYQEQLRTLEVNNYALT 240

Query: 241 MHLNQAQQSSSIPGRFHPDIF 262
           MHL QAQQSSSIPGRFHPD+F
Sbjct: 241 MHLKQAQQSSSIPGRFHPDVF 260

[Close]

BLAST of Sed0021041 vs. ExPASy TrEMBL
Match: A0A6J1K7Q5 (uncharacterized protein LOC111493023 OS=Cucurbita maxima OX=3661 GN=LOC111493023 PE=4 SV=1)

HSP 1 Score: 407.5 bits (1046), Expect = 4.1e-110
Identity = 217/261 (83.14%), Postives = 237/261 (90.80%), Query Frame = 0


Query: 1   MSAVVCGTKRSFFEELPPSPPIAKRHRCSSSSSSPIRFPAPSPLHHLQDLFPDMDHQLLL 60
           MSAVVCGTKRSFFEELPPSPP++KR RC SS++SPIRF A   +  LQ+LFP MDHQLL+
Sbjct: 1   MSAVVCGTKRSFFEELPPSPPVSKRLRC-SSTTSPIRFAASCLIDQLQNLFPQMDHQLLV 60

Query: 61  RALEECGNDLDAAIKSLSDLRLRSAVENPVATSEAETNLDQGTFAKDGEAAASENLSAPS 120
           R LEECGNDLDAAIKSLS++ L S VENPVAT+ AETNLDQG+FA +GE AASENLSAPS
Sbjct: 61  RVLEECGNDLDAAIKSLSNMCLGSTVENPVATTPAETNLDQGSFADNGEPAASENLSAPS 120

Query: 121 SVSLDGREWVDLFVREMMSATSVDDARTRAARALETLESSIRARAGANAEQNVHKENMQL 180
            VSLDGREWVDLFVREMMSATSV+DARTRAARALE LESSI ARAGA+A QN HKEN QL
Sbjct: 121 RVSLDGREWVDLFVREMMSATSVEDARTRAARALEALESSISARAGADAAQNFHKENTQL 180

Query: 181 KEQIGVLLRENTILKRAVAIQHERQKEFDNKNLELQHLKQLVSQYQEQMRTLEISNYALT 240
           KEQI VLLRENTILKRAVAIQHERQKEF++KNLELQHLKQLVSQYQEQ+RTLE++NYALT
Sbjct: 181 KEQIEVLLRENTILKRAVAIQHERQKEFEDKNLELQHLKQLVSQYQEQLRTLEVNNYALT 240

Query: 241 MHLNQAQQSSSIPGRFHPDIF 262
           MHL QAQQSSSIPGRFHPD+F
Sbjct: 241 MHLKQAQQSSSIPGRFHPDVF 260

[Close]

BLAST of Sed0021041 vs. ExPASy TrEMBL
Match: A0A6J1GCX8 (uncharacterized protein LOC111452812 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111452812 PE=4 SV=1)

HSP 1 Score: 406.8 bits (1044), Expect = 7.0e-110
Identity = 219/262 (83.59%), Postives = 238/262 (90.84%), Query Frame = 0


Query: 1   MSAVVCGTKRSFFEELPPSPPIAKRHRCSSSSSSPIRFPAPSPLHHLQDLFPDMDHQLLL 60
           MSAVVCGTKRSFFEELPPSPP++KR RC SS++SPIRF A   +  LQ+LFP MDHQLL+
Sbjct: 1   MSAVVCGTKRSFFEELPPSPPVSKRLRC-SSTTSPIRFAASCLIDQLQNLFPQMDHQLLV 60

Query: 61  RALEECGNDLDAAIKSLSDLRLRSAVENPVATSEAETNLDQ-GTFAKDGEAAASENLSAP 120
           R LEECGNDLDAAIKSLS++ L S VENPVAT+ AETNLD  G+FA +GE AASENLSAP
Sbjct: 61  RVLEECGNDLDAAIKSLSNMCLGSTVENPVATTAAETNLDHGGSFADNGEPAASENLSAP 120

Query: 121 SSVSLDGREWVDLFVREMMSATSVDDARTRAARALETLESSIRARAGANAEQNVHKENMQ 180
           SSVSLDGREWVDLFVREMMSATSVDDARTRAARALE LESSI ARAGA+A QN HKENMQ
Sbjct: 121 SSVSLDGREWVDLFVREMMSATSVDDARTRAARALEALESSISARAGADAAQNFHKENMQ 180

Query: 181 LKEQIGVLLRENTILKRAVAIQHERQKEFDNKNLELQHLKQLVSQYQEQMRTLEISNYAL 240
           LKEQI VLLRENTILKRAVAIQHERQKEF++KNLELQHLKQLVSQYQEQ+RTLE++NYAL
Sbjct: 181 LKEQIEVLLRENTILKRAVAIQHERQKEFEDKNLELQHLKQLVSQYQEQLRTLEVNNYAL 240

Query: 241 TMHLNQAQQSSSIPGRFHPDIF 262
           TMHL QAQQSSSIPGRFHPD+F
Sbjct: 241 TMHLKQAQQSSSIPGRFHPDVF 261

[Close]

BLAST of Sed0021041 vs. ExPASy TrEMBL
Match: A0A6J1GWH1 (uncharacterized protein LOC111457514 OS=Cucurbita moschata OX=3662 GN=LOC111457514 PE=4 SV=1)

HSP 1 Score: 396.0 bits (1016), Expect = 1.2e-106
Identity = 213/262 (81.30%), Postives = 231/262 (88.17%), Query Frame = 0


Query: 1   MSAVVCGTKRSFFEELPPSPPIAKRHRCSSSSSSPIRFPAPSPL-HHLQDLFPDMDHQLL 60
           MSAVVCGTKRSFFEE+PPSPPI+KR RC SSS+SPI FPAPS L  HL  LFP MDHQLL
Sbjct: 1   MSAVVCGTKRSFFEEIPPSPPISKRLRC-SSSTSPITFPAPSSLIDHLHHLFPHMDHQLL 60

Query: 61  LRALEECGNDLDAAIKSLSDLRLRSAVENPVATSEAETNLDQGTFAKDGEAAASENLSAP 120
           +RALEECGNDLDAAIKSLSDL L SAVENPVAT+E E NLDQG+FA DGEAAASEN S P
Sbjct: 61  VRALEECGNDLDAAIKSLSDLCLGSAVENPVATAEPEPNLDQGSFANDGEAAASENCSVP 120

Query: 121 SSVSLDGREWVDLFVREMMSATSVDDARTRAARALETLESSIRARAGANAEQNVHKENMQ 180
           SSVSLDGR+W+DLFV EM+SA  V DAR+RAARALE LE+SI A AG +A QN HKENMQ
Sbjct: 121 SSVSLDGRKWIDLFVVEMVSAIDVADARSRAARALEALENSISASAGVDAAQNFHKENMQ 180

Query: 181 LKEQIGVLLRENTILKRAVAIQHERQKEFDNKNLELQHLKQLVSQYQEQMRTLEISNYAL 240
           LKEQI VLLRENTILKRAVAIQHERQKEF+ KN+ELQHLKQLV QYQEQ+RTLEI+NYAL
Sbjct: 181 LKEQIEVLLRENTILKRAVAIQHERQKEFEGKNIELQHLKQLVCQYQEQLRTLEINNYAL 240

Query: 241 TMHLNQAQQSSSIPGRFHPDIF 262
           TMHL Q +QSSSIPGRFHPD+F
Sbjct: 241 TMHLKQTEQSSSIPGRFHPDVF 261

[Close]

BLAST of Sed0021041 vs. TAIR 10
Match: AT5G32440.1 (Ubiquitin system component Cue protein )

HSP 1 Score: 263.1 bits (671), Expect = 2.4e-70
Identity = 148/269 (55.02%), Postives = 201/269 (74.72%), Query Frame = 0


Query: 1   MSAVVCGTKRSFFEEL-PPSPPIAKRHRCSSSSSSPIRFPAPSP------LHHLQDLFPD 60
           MSA+VCG KRS FE+L   SPP++K+ RC SSSSS  RF  P P      L HL  +FPD
Sbjct: 1   MSAIVCG-KRSLFEDLAAASPPVSKKLRCFSSSSSS-RFSPPIPPSSSLLLDHLAAIFPD 60

Query: 61  MDHQLLLRALEECGNDLDAAIKSLSDLRLRSAVEN-PVATSEAETNLDQGTFAKDGEAAA 120
           MD Q+L RA+EECG+DLD+AI+ L+ LRL SA +N   AT+++   + +       + +A
Sbjct: 61  MDKQILERAIEECGDDLDSAIRCLNQLRLESANKNSDSATNQSPVVIQEPNVEPQQQGSA 120

Query: 121 SENLSAPSSVSLDGREWVDLFVREMMSATSVDDARTRAARALETLESSIRARAGANAEQN 180
            E    P+ ++LDG EWV+LFVREMM+A+ + DA+ RAARALE LE SI AR G +A QN
Sbjct: 121 KEE---PNVLNLDGTEWVELFVREMMNASDMKDAKARAARALEALEKSINARTGTDAMQN 180

Query: 181 VHKENMQLKEQIGVLLRENTILKRAVAIQHERQKEFDNKNLELQHLKQLVSQYQEQMRTL 240
           + +ENM LK+Q+  +++EN++LKRAV  Q +RQ+E ++++ ELQHL+QLV+QYQEQ+RTL
Sbjct: 181 LQQENMMLKQQLEAIVQENSLLKRAVVTQQKRQRESEDQSQELQHLRQLVTQYQEQLRTL 240

Query: 241 EISNYALTMHLNQAQQSSSIPGRFHPDIF 262
           E++NYALT+HL QAQQ+SSIPGR+HPD+F
Sbjct: 241 EVNNYALTLHLKQAQQNSSIPGRYHPDVF 264

[Close]

BLAST of Sed0021041 vs. TAIR 10
Match: AT5G32440.3 (Ubiquitin system component Cue protein )

HSP 1 Score: 261.2 bits (666), Expect = 9.2e-70
Identity = 149/271 (54.98%), Postives = 199/271 (73.43%), Query Frame = 0


Query: 1   MSAVVCGTKRSFFEEL-PPSPPIAKRHRCSSSSSSPIRFPAPSP------LHHLQDLFPD 60
           MSA+VCG KRS FE+L   SPP++K+ RC SSSSS  RF  P P      L HL  +FPD
Sbjct: 1   MSAIVCG-KRSLFEDLAAASPPVSKKLRCFSSSSSS-RFSPPIPPSSSLLLDHLAAIFPD 60

Query: 61  MDHQLLLRALEECGNDLDAAIKSLSDLRLRSAVENPVATSEAETNLDQGTFAKDGEAAAS 120
           MD Q+L RA+EECG+DLD+AI+ L+ LRL SA +N    S++ TN       +       
Sbjct: 61  MDKQILERAIEECGDDLDSAIRCLNQLRLESANKN----SDSATNQSPVVIQEPNVEPQQ 120

Query: 121 ENLSA---PSSVSLDGREWVDLFVREMMSATSVDDARTRAARALETLESSIRARAGANAE 180
           +  SA   P+ ++LDG EWV+LFVREMM+A+ + DA+ RAARALE LE SI AR G +A 
Sbjct: 121 QGRSAKEEPNVLNLDGTEWVELFVREMMNASDMKDAKARAARALEALEKSINARTGTDAM 180

Query: 181 QNVHKENMQLKEQIGVLLRENTILKRAVAIQHERQKEFDNKNLELQHLKQLVSQYQEQMR 240
           QN+ +ENM LK+Q+  +++EN++LKRAV  Q +RQ+E ++++ ELQHL+QLV+QYQEQ+R
Sbjct: 181 QNLQQENMMLKQQLEAIVQENSLLKRAVVTQQKRQRESEDQSQELQHLRQLVTQYQEQLR 240

Query: 241 TLEISNYALTMHLNQAQQSSSIPGRFHPDIF 262
           TLE++NYALT+HL QAQQ+SSIPGR+HPD+F
Sbjct: 241 TLEVNNYALTLHLKQAQQNSSIPGRYHPDVF 265

[Close]

BLAST of Sed0021041 vs. TAIR 10
Match: AT1G80040.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin system component Cue (InterPro:IPR003892); BEST Arabidopsis thaliana protein match is: Ubiquitin system component Cue protein (TAIR:AT5G32440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 188.7 bits (478), Expect = 5.8e-48
Identity = 113/262 (43.13%), Postives = 161/262 (61.45%), Query Frame = 0


Query: 1   MSAVVCGTKRSFFEELPPSPPIAKRHRCSSSSSSPI-RFPAPSPLHHLQDLFPDMDHQLL 60
           MSAV CGTKRS+F++   SPP +KR RC S S+SPI   P  S L  L   FP ++  +L
Sbjct: 1   MSAVYCGTKRSYFDD-NSSPPSSKRFRCFSPSNSPIWSSPPSSSLDQLHSAFPHIELTVL 60

Query: 61  LRALEECGNDLDAAIKSLSDLRLRSAVENPVATSEAETNLDQGTFAKDGEAAASENLSAP 120
           ++ALE+ G+D +AA+KSL               S  E   ++   A  G A    +    
Sbjct: 61  VKALEDNGSDFNAAMKSLYSF-----------ASSEEKKAEE--LAAGGAATQETDAVCG 120

Query: 121 SSVSLDGREWVDLFVREMMSATSVDDARTRAARALETLESSIRARAGANAEQNVHKENMQ 180
            +    G +WV+L VRE++ ++  DDA+ RAAR LE LE  + ARA   A     +E + 
Sbjct: 121 GNPPTSGDDWVELLVREVLQSSGTDDAKVRAARVLEALEKMLSARAREEAGNKFQEEKVA 180

Query: 181 LKEQIGVLLRENTILKRAVAIQHERQKEFDNKNLELQHLKQLVSQYQEQMRTLEISNYAL 240
           +++Q+  L+++NT+LKRAVAIQHERQK  ++ N +L  LKQLV QYQE++R LE++NYAL
Sbjct: 181 VQQQVETLVKDNTVLKRAVAIQHERQKALEDANHQLGLLKQLVPQYQEKLRNLEVNNYAL 240

Query: 241 TMHLNQAQQSSSIPGRFHPDIF 262
            M L Q +  +S+P RF+PD+F
Sbjct: 241 RMQLQQVEHGNSMPARFNPDVF 248

[Close]

BLAST of Sed0021041 vs. TAIR 10
Match: AT1G80040.3 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: Ubiquitin system component Cue protein (TAIR:AT5G32440.1). )

HSP 1 Score: 183.0 bits (463), Expect = 3.2e-46
Identity = 114/273 (41.76%), Postives = 162/273 (59.34%), Query Frame = 0


Query: 1   MSAVVCGTKRSFFEELPPSPPIAKRHRCSSSSSSPI-RFPAPSPLHHLQDLFPDMD---- 60
           MSAV CGTKRS+F++   SPP +KR RC S S+SPI   P  S L  L   FP ++    
Sbjct: 1   MSAVYCGTKRSYFDD-NSSPPSSKRFRCFSPSNSPIWSSPPSSSLDQLHSAFPHIELTVA 60

Query: 61  -------HQLLLRALEECGNDLDAAIKSLSDLRLRSAVENPVATSEAETNLDQGTFAKDG 120
                   Q+L++ALE+ G+D +AA+KSL               S  E   ++   A  G
Sbjct: 61  SKIHVSVAQVLVKALEDNGSDFNAAMKSLYSF-----------ASSEEKKAEE--LAAGG 120

Query: 121 EAAASENLSAPSSVSLDGREWVDLFVREMMSATSVDDARTRAARALETLESSIRARAGAN 180
            A    +     +    G +WV+L VRE++ ++  DDA+ RAAR LE LE  + ARA   
Sbjct: 121 AATQETDAVCGGNPPTSGDDWVELLVREVLQSSGTDDAKVRAARVLEALEKMLSARAREE 180

Query: 181 AEQNVHKENMQLKEQIGVLLRENTILKRAVAIQHERQKEFDNKNLELQHLKQLVSQYQEQ 240
           A     +E + +++Q+  L+++NT+LKRAVAIQHERQK  ++ N +L  LKQLV QYQE+
Sbjct: 181 AGNKFQEEKVAVQQQVETLVKDNTVLKRAVAIQHERQKALEDANHQLGLLKQLVPQYQEK 240

Query: 241 MRTLEISNYALTMHLNQAQQSSSIPGRFHPDIF 262
           +R LE++NYAL M L Q +  +S+P RF+PD+F
Sbjct: 241 LRNLEVNNYALRMQLQQVEHGNSMPARFNPDVF 259

[Close]

BLAST of Sed0021041 vs. TAIR 10
Match: AT5G32440.2 (Ubiquitin system component Cue protein )

HSP 1 Score: 148.7 bits (374), Expect = 6.6e-36
Identity = 94/189 (49.74%), Postives = 127/189 (67.20%), Query Frame = 0


Query: 1   MSAVVCGTKRSFFEEL-PPSPPIAKRHRCSSSSSSPIRFPAPSP------LHHLQDLFPD 60
           MSA+VCG KRS FE+L   SPP++K+ RC SSSSS  RF  P P      L HL  +FPD
Sbjct: 1   MSAIVCG-KRSLFEDLAAASPPVSKKLRCFSSSSSS-RFSPPIPPSSSLLLDHLAAIFPD 60

Query: 61  MDHQLLLRALEECGNDLDAAIKSLSDLRLRSAVEN-PVATSEAETNLDQGTFAKDGEAAA 120
           MD Q+L RA+EECG+DLD+AI+ L+ LRL SA +N   AT+++   + +       + +A
Sbjct: 61  MDKQILERAIEECGDDLDSAIRCLNQLRLESANKNSDSATNQSPVVIQEPNVEPQQQGSA 120

Query: 121 SENLSAPSSVSLDGREWVDLFVREMMSATSVDDARTRAARALETLESSIRARAGANAEQN 180
            E    P+ ++LDG EWV+LFVREMM+A+ + DA+ RAARALE LE SI AR G +A QN
Sbjct: 121 KEE---PNVLNLDGTEWVELFVREMMNASDMKDAKARAARALEALEKSINARTGTDAMQN 180

Query: 181 VHKENMQLK 182
           + ++ +  K
Sbjct: 181 LQQKLLYRK 184

The following BLAST results are available for this feature:

BLAST of Sed0021041 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022153492.1	4.8e-113	85.82	uncharacterized protein LOC111020986 [Momordica charantia]	[more]
XP_022949480.1	1.6e-111	84.29	uncharacterized protein LOC111452812 isoform X2 [Cucurbita moschata]	[more]
XP_023525880.1	4.5e-111	83.91	uncharacterized protein LOC111789361 [Cucurbita pepo subsp. pepo]	[more]
XP_022998357.1	8.5e-110	83.14	uncharacterized protein LOC111493023 [Cucurbita maxima]	[more]
XP_022949479.1	1.5e-109	83.59	uncharacterized protein LOC111452812 isoform X1 [Cucurbita moschata]	[more]

BLAST of Sed0021041 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0021041 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DJ22	2.3e-113	85.82	uncharacterized protein LOC111020986 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]
A0A6J1GCW0	7.5e-112	84.29	uncharacterized protein LOC111452812 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1K7Q5	4.1e-110	83.14	uncharacterized protein LOC111493023 OS=Cucurbita maxima OX=3661 GN=LOC111493023...	[more]
A0A6J1GCX8	7.0e-110	83.59	uncharacterized protein LOC111452812 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1GWH1	1.2e-106	81.30	uncharacterized protein LOC111457514 OS=Cucurbita moschata OX=3662 GN=LOC1114575...	[more]

BLAST of Sed0021041 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G32440.1	2.4e-70	55.02	Ubiquitin system component Cue protein	[more]
AT5G32440.3	9.2e-70	54.98	Ubiquitin system component Cue protein	[more]
AT1G80040.1	5.8e-48	43.13	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT1G80040.3	3.2e-46	41.76	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT5G32440.2	6.6e-36	49.74	Ubiquitin system component Cue protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 208..235
None	No IPR available	GENE3D	1.10.8.10		coord: 40..83 e-value: 3.4E-6 score: 28.5
None	No IPR available	PANTHER	PTHR31245:SF20	F18B13.13 PROTEIN	coord: 1..261
None	No IPR available	PANTHER	PTHR31245	UBIQUITIN SYSTEM COMPONENT CUE PROTEIN	coord: 1..261
None	No IPR available	CDD	cd14279	CUE	coord: 42..77 e-value: 2.56579E-9 score: 49.7741
IPR003892	Ubiquitin system component CUE	PFAM	PF02845	CUE	coord: 44..79 e-value: 3.9E-8 score: 32.8
IPR003892	Ubiquitin system component CUE	PROSITE	PS51140	CUE	coord: 39..82 score: 12.604303
IPR009060	UBA-like superfamily	SUPERFAMILY	46934	UBA-like	coord: 42..82

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0021041.1	Sed0021041.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0043130	ubiquitin binding
molecular_function	GO:0005515	protein binding