Sed0020959 (gene) Chayote v1

Overview


Name	Sed0020959
Type	gene
Organism	Sechium edule (Chayote v1)
Description	multiprotein bridging factor 1B
Location	LG05: 41689279 .. 41692162 (-)
RNA-Seq Expression	Sed0020959
Synteny	Sed0020959

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGCGTGAGTTATAACTGCGTGTTCTCCAAGCCAATCCAGCAAATTTATATACTCTGATCAGAAACCCTAATTCCCATTCTGCGTACGATCGAGCTTGCAAGGAGATAAGGAGACGAAAGAGAGAGTTGAAATGGCTGGAACTGGTCCACTTTCACAGGATTGGGAGCCGGTGGTTCTCAGGAAGAAGGCACCGAACGCCGCCGCCAAGAAGGACGAGAAAGCGGTCAATGCTGCTCGGCGAGCCGGGGCGGAGATCGAGACCATAAAGAAATGTGCGGTTTCTATCTTTTGATCGATATTTCCCTCGATTCTGTTATTGGAATCCGAATCGATTTTTATTTTGTTTGTGTTTTGACTCTGGACTCTGTTTTTGCGTGAGTTGATTACTGTTAAGTGGGAAGGTGATCGTTTTTTTGTTTTTTCATATCCACCCTATCTTGCGCACATCTTGATTATTGTCTAGGCGTGATTCTACAACATTTAGATGTCGAAGCGGAAAGCTGATGATAATCGAGATTTAGATTAGAAAGATACGTTCGAGTTTCATATTGGGAGACCATGGGATTGGTTTTTGTAACTGGGTATCAACTCTGGGGTTTAAATTTTGGGTTAATTATAAGTTTGGTCCCTATAGTTTTGAATAAAGAATAAAGTTAGGGTTTAGACCTATGTTTATAGAAAGGTTAGAATTTAGCTCCTATCATTTAAAAACTAGAATTTATTTCCGGTTCGATAAAATCTTGTTTGTAATAGTTGGGAATTATATGTCGAAATTAGTCATTCGCTTGTAAATGATATGATTTTTTTGTCTAATCAGACATTGTCATCATTTTCTTCGAACCGTACGATTAAATTCTAGTTTTTGAAATCATAGTGACTAAACTCTAAATTTCTTTAAACTATAGAGGCTTAATGAGATAATCTTTAGTGAATTTAGGGCTGGTTATTAAGATAATCTTCTGGACATGCAATGCAAGGCTTTCTGACTTAAAGTTGGAAGTTCAACTCCTCGAGGGTTGGAATTTTGTATTCACCTTGTTACCTTATTGTAAAAATTACTCAATGAAAATGCATTTTCCTAAAAAAATAAAATAAAAGGGTCAGGTGAGAAATGATAGTTTGAGACTTGATGCTGACCCTTACGCAGTTGGGCTCCCTTATATTATACTTATGTTTGTTTTATTGAGTGAAATACAGTGTTGCAATGCAGTTATATTTTCTTTCCTTGTGCAGCTACTGCTGGATCAAACAAATCTGCCTCTAGCAGTACTAGTTTGAATACTAGGAAGCTTGACGAAGAGACTGAGAACCTTTCTCGTGAGTACTTCCGGCTTACACTTTTATAGCATAGTCGGATAAGTTCTATTGTTCATCTCTTGTTTCAATGACTTGAGGAATTAATTGGGTTCATATGAGCAATAGGAGTCTTTTACCTAGAACAAGATACGTTATGTAGGTTGTGCAGTTGTGCTCTTGAGTTTTAAAGATTAGTTGATTGAATATTAGAGAAAGACTATGCTAGCAATGTATTACGTTTTATATATGCTATCTCAATTATTGTTAGACACTTTAATGTTTTACATTTCCTTTTGGATTTCAACAACAAAGAACTCCAAAAGAAGATGAGAAAAGGAAACTTGCCAACTATCACAATGTAAGCCTTTGTGCATTATCATAGAAGCGTTAGCGTAAGCCTTTTTTTAGGAAAGGCGTAAGCCTCTTATGATTTAACAAAGGCGCAAGCCTTGAGTTTAACAGTTAAAAAGATTCGCTTTGAGGCGTGTCTCGAGACATAAGGCTCAACAGCTTTTTAAAGAATGGACGGATTCCATTCTTTTAATAATTAACTAATGTATTAGTTATTAAATTGAGTCTGTTCAAGATCCTTAAACTTTCAATTTTTTGTCTAGTAGGTTTGTGAATTTTAGAGAATGTGGAATAGATCAAGGACGTAACAGTAAAAATTGAAAGTTTTCAAGGGTTTATTAATAAAATTAAAGCTTAAGGACCAATGAACTGAAAATAAAAGCTCAATGGCCAATTTTTTTTAAGAGGTGATGGGAATGGGTTTAATACATGAACCCACCTACAATCAAACGTAGTAGGTGGTTATTATGAAATAGATGCACATTGGTTATAATGAAATATAGATACACATTTGAAAAGTAAGGAACTGTTAATATATCTTTTTATGCATTGCTGTTTTGTTAATTGGATATTCTAATTTGACTCTAGATGACCGAGTACCAACTGAGCTGAAGAAAGCGATTATCCAAGCTCGAACAGAAAAGAAGCTTACTCAGTCTCAGCTTGCTCAAGTATGTTTGTTCCACACGCTTGTTTTTGTTTATTCAAGAATGTTTGTTGCACACGTGGCTCATCCCTTATTGACATGGTTTATTTTTTCTTCCCCTGTAGCTTATTAATGAGAAGCCGCAAATTATCCAGGAGTACGAATCTGGAAAAGCTATTCCGAATCAACAAGTAATAACCAAACTTGAGAGGGCACTTGGAGCCAAGCTGCGTGGGAAGAAATAAAGAGATCTGGAATGTCAAGTATGAGTTCTACATAAGCTTCTGTTTGAACCATGCTCAAAATGTCATACTCTATCGTGGTTTCAATGTGTAATTAGTTTAGACCGTCCTCGTGTGCCTGTATAACTACTGCTGCAGTGTCTTGGTAAGTTATTACCTGGAAATAAATAAAGATAATGTCTGTCATGTTGCGAAAGTTTCCAGTTATTTTGGCTATGCTTTCCACACCTTATGGCTGCACACATAACCATTAACAATTCAGCAACTTGTATTGAGAGCTTATGAATGTTATCATATCCTAGTCTCTGAATATTATTAATTCGATTTCCATGATCACATTAAATTCTGG

mRNA sequence

GGCGTGAGTTATAACTGCGTGTTCTCCAAGCCAATCCAGCAAATTTATATACTCTGATCAGAAACCCTAATTCCCATTCTGCGTACGATCGAGCTTGCAAGGAGATAAGGAGACGAAAGAGAGAGTTGAAATGGCTGGAACTGGTCCACTTTCACAGGATTGGGAGCCGGTGGTTCTCAGGAAGAAGGCACCGAACGCCGCCGCCAAGAAGGACGAGAAAGCGGTCAATGCTGCTCGGCGAGCCGGGGCGGAGATCGAGACCATAAAGAAATCTACTGCTGGATCAAACAAATCTGCCTCTAGCAGTACTAGTTTGAATACTAGGAAGCTTGACGAAGAGACTGAGAACCTTTCTCATGACCGAGTACCAACTGAGCTGAAGAAAGCGATTATCCAAGCTCGAACAGAAAAGAAGCTTACTCAGTCTCAGCTTGCTCAACTTATTAATGAGAAGCCGCAAATTATCCAGGAGTACGAATCTGGAAAAGCTATTCCGAATCAACAAGTAATAACCAAACTTGAGAGGGCACTTGGAGCCAAGCTGCGTGGGAAGAAATAAAGAGATCTGGAATGTCAAGTATGAGTTCTACATAAGCTTCTGTTTGAACCATGCTCAAAATGTCATACTCTATCGTGGTTTCAATGTGTAATTAGTTTAGACCGTCCTCGTGTGCCTGTATAACTACTGCTGCAGTGTCTTGGTAAGTTATTACCTGGAAATAAATAAAGATAATGTCTGTCATGTTGCGAAAGTTTCCAGTTATTTTGGCTATGCTTTCCACACCTTATGGCTGCACACATAACCATTAACAATTCAGCAACTTGTATTGAGAGCTTATGAATGTTATCATATCCTAGTCTCTGAATATTATTAATTCGATTTCCATGATCACATTAAATTCTGG

Coding sequence (CDS)

ATGGCTGGAACTGGTCCACTTTCACAGGATTGGGAGCCGGTGGTTCTCAGGAAGAAGGCACCGAACGCCGCCGCCAAGAAGGACGAGAAAGCGGTCAATGCTGCTCGGCGAGCCGGGGCGGAGATCGAGACCATAAAGAAATCTACTGCTGGATCAAACAAATCTGCCTCTAGCAGTACTAGTTTGAATACTAGGAAGCTTGACGAAGAGACTGAGAACCTTTCTCATGACCGAGTACCAACTGAGCTGAAGAAAGCGATTATCCAAGCTCGAACAGAAAAGAAGCTTACTCAGTCTCAGCTTGCTCAACTTATTAATGAGAAGCCGCAAATTATCCAGGAGTACGAATCTGGAAAAGCTATTCCGAATCAACAAGTAATAACCAAACTTGAGAGGGCACTTGGAGCCAAGCTGCGTGGGAAGAAATAA

Protein sequence

MAGTGPLSQDWEPVVLRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSTAGSNKSASSSTSLNTRKLDEETENLSHDRVPTELKKAIIQARTEKKLTQSQLAQLINEKPQIIQEYESGKAIPNQQVITKLERALGAKLRGKK

Homology

[Close]

BLAST of Sed0020959 vs. NCBI nr
Match: XP_022943574.1 (multiprotein-bridging factor 1b [Cucurbita moschata] >XP_022986044.1 multiprotein-bridging factor 1b [Cucurbita maxima] >XP_023513396.1 multiprotein-bridging factor 1b [Cucurbita pepo subsp. pepo] >KAG6570527.1 Multiprotein-bridging factor 1b, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010384.1 Multiprotein-bridging factor 1b [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 249.6 bits (636), Expect = 1.6e-62
Identity = 134/142 (94.37%), Postives = 141/142 (99.30%), Query Frame = 0


Query: 1   MAGTGPLSQDWEPVVLRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSTAGSNKSASSST 60
           MAG GPL+QDWEPVV+RKKAPNAAAKKDEKAVNAARRAGAEIET+KKSTAGSNKSASSST
Sbjct: 1   MAGIGPLTQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETVKKSTAGSNKSASSST 60

Query: 61  SLNTRKLDEETENLSHDRVPTELKKAIIQARTEKKLTQSQLAQLINEKPQIIQEYESGKA 120
           SLNTRKLDEETENL+HDRVPTELKKAI+QARTEKKLTQSQLAQLINEKPQ+IQEYESGKA
Sbjct: 61  SLNTRKLDEETENLTHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQVIQEYESGKA 120

Query: 121 IPNQQVITKLERALGAKLRGKK 143
           IPNQQ+ITKLERALGAKLRGKK
Sbjct: 121 IPNQQIITKLERALGAKLRGKK 142

[Close]

BLAST of Sed0020959 vs. NCBI nr
Match: XP_022149711.1 (multiprotein-bridging factor 1b-like [Momordica charantia])

HSP 1 Score: 248.8 bits (634), Expect = 2.8e-62
Identity = 135/142 (95.07%), Postives = 140/142 (98.59%), Query Frame = 0


Query: 1   MAGTGPLSQDWEPVVLRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSTAGSNKSASSST 60
           MAG GPLSQDWEPVVLRKKAPNAAAKKDEKAVNAARRAGAEIETIKKS AGSNKSASSST
Sbjct: 1   MAGIGPLSQDWEPVVLRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAGSNKSASSST 60

Query: 61  SLNTRKLDEETENLSHDRVPTELKKAIIQARTEKKLTQSQLAQLINEKPQIIQEYESGKA 120
           SLNTRKLDEETENLSHDRVPTELKKAI+QARTEKKLTQSQLAQLINEKPQ+IQ+YE+GKA
Sbjct: 61  SLNTRKLDEETENLSHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQVIQDYEAGKA 120

Query: 121 IPNQQVITKLERALGAKLRGKK 143
           IPNQQ+ITKLERALGAKLRGKK
Sbjct: 121 IPNQQIITKLERALGAKLRGKK 142

[Close]

BLAST of Sed0020959 vs. NCBI nr
Match: XP_008448251.1 (PREDICTED: multiprotein-bridging factor 1b [Cucumis melo] >KAA0062161.1 multiprotein-bridging factor 1b [Cucumis melo var. makuwa] >TYK04879.1 multiprotein-bridging factor 1b [Cucumis melo var. makuwa])

HSP 1 Score: 248.4 bits (633), Expect = 3.6e-62
Identity = 135/142 (95.07%), Postives = 139/142 (97.89%), Query Frame = 0


Query: 1   MAGTGPLSQDWEPVVLRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSTAGSNKSASSST 60
           MAG GPLSQDWEPVV+RKKAPNAAAKKDEKAVNAARRAGAEIETIKKS AGSNKSASSST
Sbjct: 1   MAGIGPLSQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAGSNKSASSST 60

Query: 61  SLNTRKLDEETENLSHDRVPTELKKAIIQARTEKKLTQSQLAQLINEKPQIIQEYESGKA 120
           SLNTRKLDEETENLSHDRVPTELKKAI+ ARTEKKLTQSQLAQLINEKPQ+IQEYESGKA
Sbjct: 61  SLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQLINEKPQVIQEYESGKA 120

Query: 121 IPNQQVITKLERALGAKLRGKK 143
           IPNQQ+ITKLERALGAKLRGKK
Sbjct: 121 IPNQQIITKLERALGAKLRGKK 142

[Close]

BLAST of Sed0020959 vs. NCBI nr
Match: XP_004149278.1 (multiprotein-bridging factor 1b [Cucumis sativus] >KGN46986.1 hypothetical protein Csa_020917 [Cucumis sativus])

HSP 1 Score: 247.3 bits (630), Expect = 8.0e-62
Identity = 134/142 (94.37%), Postives = 139/142 (97.89%), Query Frame = 0


Query: 1   MAGTGPLSQDWEPVVLRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSTAGSNKSASSST 60
           MAG GPLSQDWEPVV+RKKAPNAAAKKDEKAVNAARRAGAEIETIKKS AGSNKSASSST
Sbjct: 1   MAGIGPLSQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAGSNKSASSST 60

Query: 61  SLNTRKLDEETENLSHDRVPTELKKAIIQARTEKKLTQSQLAQLINEKPQIIQEYESGKA 120
           +LNTRKLDEETENLSHDRVPTELKKAI+ ARTEKKLTQSQLAQLINEKPQ+IQEYESGKA
Sbjct: 61  TLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQLINEKPQVIQEYESGKA 120

Query: 121 IPNQQVITKLERALGAKLRGKK 143
           IPNQQ+ITKLERALGAKLRGKK
Sbjct: 121 IPNQQIITKLERALGAKLRGKK 142

[Close]

BLAST of Sed0020959 vs. NCBI nr
Match: XP_023533868.1 (multiprotein-bridging factor 1b-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 246.5 bits (628), Expect = 1.4e-61
Identity = 135/142 (95.07%), Postives = 139/142 (97.89%), Query Frame = 0


Query: 1   MAGTGPLSQDWEPVVLRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSTAGSNKSASSST 60
           MAG  PLSQDWEPVVLRKKAPNAAAKKDEKAVNAARRAGAEIETIKKS AGSNKSASSST
Sbjct: 1   MAGIVPLSQDWEPVVLRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAGSNKSASSST 60

Query: 61  SLNTRKLDEETENLSHDRVPTELKKAIIQARTEKKLTQSQLAQLINEKPQIIQEYESGKA 120
           SLNTRKLDEETENL+HDRVPTELKKAI+QARTEKKLTQSQLAQLINEKPQ+IQEYESGKA
Sbjct: 61  SLNTRKLDEETENLTHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQVIQEYESGKA 120

Query: 121 IPNQQVITKLERALGAKLRGKK 143
           IPNQQ+ITKLERALGAKLRGKK
Sbjct: 121 IPNQQIITKLERALGAKLRGKK 142

[Close]

BLAST of Sed0020959 vs. ExPASy Swiss-Prot
Match: Q9LXT3 (Multiprotein-bridging factor 1b OS=Arabidopsis thaliana OX=3702 GN=MBF1B PE=1 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 4.3e-58
Identity = 117/142 (82.39%), Postives = 135/142 (95.07%), Query Frame = 0


Query: 1   MAGTGPLSQDWEPVVLRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSTAGSNKSASSST 60
           MAG GP++QDWEPVV+RK+APNAAAK+DEK VNAARR+GA+IET++K  AGSNK+ASS T
Sbjct: 1   MAGIGPITQDWEPVVIRKRAPNAAAKRDEKTVNAARRSGADIETVRKFNAGSNKAASSGT 60

Query: 61  SLNTRKLDEETENLSHDRVPTELKKAIIQARTEKKLTQSQLAQLINEKPQIIQEYESGKA 120
           SLNT+KLD++TENLSHDRVPTELKKAI+QAR EKKLTQSQLA LINEKPQ+IQEYESGKA
Sbjct: 61  SLNTKKLDDDTENLSHDRVPTELKKAIMQARGEKKLTQSQLAHLINEKPQVIQEYESGKA 120

Query: 121 IPNQQVITKLERALGAKLRGKK 143
           IPNQQ+++KLERALGAKLRGKK
Sbjct: 121 IPNQQILSKLERALGAKLRGKK 142

[Close]

BLAST of Sed0020959 vs. ExPASy Swiss-Prot
Match: Q9SJI8 (Multiprotein-bridging factor 1a OS=Arabidopsis thaliana OX=3702 GN=MBF1A PE=2 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 6.8e-56
Identity = 112/142 (78.87%), Postives = 134/142 (94.37%), Query Frame = 0


Query: 1   MAGTGPLSQDWEPVVLRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSTAGSNKSASSST 60
           MAG GP++QDWEPVV+RKK  NAAAK+DEK VNAARR+GA+IET++K  AG+NK+ASS T
Sbjct: 1   MAGIGPITQDWEPVVIRKKPANAAAKRDEKTVNAARRSGADIETVRKFNAGTNKAASSGT 60

Query: 61  SLNTRKLDEETENLSHDRVPTELKKAIIQARTEKKLTQSQLAQLINEKPQIIQEYESGKA 120
           SLNT+ LD++TENL+H+RVPTELKKAI+QART+KKLTQSQLAQ+INEKPQ+IQEYESGKA
Sbjct: 61  SLNTKMLDDDTENLTHERVPTELKKAIMQARTDKKLTQSQLAQIINEKPQVIQEYESGKA 120

Query: 121 IPNQQVITKLERALGAKLRGKK 143
           IPNQQ+++KLERALGAKLRGKK
Sbjct: 121 IPNQQILSKLERALGAKLRGKK 142

[Close]

BLAST of Sed0020959 vs. ExPASy Swiss-Prot
Match: Q9LV58 (Multiprotein-bridging factor 1c OS=Arabidopsis thaliana OX=3702 GN=MBF1C PE=1 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 8.4e-30
Identity = 73/139 (52.52%), Postives = 100/139 (71.94%), Query Frame = 0


Query: 5   GPLSQDWEPVVLRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSTAGSNKSASSST--SL 64
           G ++QDWEPVVL K    +   +D KAVNAA R G  ++T+KK  AGSNK   S+    +
Sbjct: 7   GAVTQDWEPVVLHKSKQKSQDLRDPKAVNAALRNGVAVQTVKKFDAGSNKKGKSTAVPVI 66

Query: 65  NTRKLDEETENLSHDRVPTELKKAIIQARTEKKLTQSQLAQLINEKPQIIQEYESGKAIP 124
           NT+KL+EETE  + DRV  E++  I +AR EKK++Q+ LA+ INE+ Q++QEYE+GKA+P
Sbjct: 67  NTKKLEEETEPAAMDRVKAEVRLMIQKARLEKKMSQADLAKQINERTQVVQEYENGKAVP 126

Query: 125 NQQVITKLERALGAKLRGK 142
           NQ V+ K+E+ LG KLRGK
Sbjct: 127 NQAVLAKMEKVLGVKLRGK 145

[Close]

BLAST of Sed0020959 vs. ExPASy Swiss-Prot
Match: Q5ZMC0 (Endothelial differentiation-related factor 1 homolog OS=Gallus gallus OX=9031 GN=EDF1 PE=2 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 1.6e-28
Identity = 77/133 (57.89%), Postives = 93/133 (69.92%), Query Frame = 0


Query: 10  DWEPV-VLRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSTAGSNKSASSSTSLNTRKLD 69
           DW+ V VLRKK P+AA  K ++AV AA+R G ++ET KK  AG NK      + NT KLD
Sbjct: 5   DWDTVTVLRKKGPSAAQAKSKQAVLAAQRRGEDVETSKKWAAGQNK--QHFITKNTAKLD 64

Query: 70  EETENLSHDRVPTELKKAIIQARTEKKLTQSQLAQLINEKPQIIQEYESGKAIPNQQVIT 129
            ETE L HDRVP E+ K I Q R  K +TQ  LA  INEKPQ+I +YESG+AIPN QV+ 
Sbjct: 65  RETEELHHDRVPLEVGKVIQQGRQSKGMTQKDLATKINEKPQVIADYESGRAIPNNQVMG 124

Query: 130 KLERALGAKLRGK 142
           K+ERA+G KLRGK
Sbjct: 125 KIERAIGLKLRGK 135

[Close]

BLAST of Sed0020959 vs. ExPASy Swiss-Prot
Match: Q6GPQ6 (Endothelial differentiation-related factor 1 homolog OS=Xenopus laevis OX=8355 GN=edf1 PE=2 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 1.6e-28
Identity = 76/133 (57.14%), Postives = 92/133 (69.17%), Query Frame = 0


Query: 10  DWEPV-VLRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSTAGSNKSASSSTSLNTRKLD 69
           DW+ V VLRKK P AA  K ++A+ AA+R G E+ET KK +AG NK    + + NT KLD
Sbjct: 5   DWDTVTVLRKKGPTAAQAKSKQAITAAQRRGEEVETSKKWSAGQNK--QHTITRNTAKLD 64

Query: 70  EETENLSHDRVPTELKKAIIQARTEKKLTQSQLAQLINEKPQIIQEYESGKAIPNQQVIT 129
            ETE L HDRVP E+ K I Q R  K +TQ  LA  INEKPQ+I +YE GKAIPN QV+ 
Sbjct: 65  RETEELHHDRVPLEVGKVIQQGRQGKGMTQKDLATKINEKPQVIADYECGKAIPNNQVMG 124

Query: 130 KLERALGAKLRGK 142
           K+ER +G KLRGK
Sbjct: 125 KIERVIGLKLRGK 135

[Close]

BLAST of Sed0020959 vs. ExPASy TrEMBL
Match: A0A6J1JEZ7 (multiprotein-bridging factor 1b OS=Cucurbita maxima OX=3661 GN=LOC111483898 PE=4 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 7.8e-63
Identity = 134/142 (94.37%), Postives = 141/142 (99.30%), Query Frame = 0


Query: 1   MAGTGPLSQDWEPVVLRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSTAGSNKSASSST 60
           MAG GPL+QDWEPVV+RKKAPNAAAKKDEKAVNAARRAGAEIET+KKSTAGSNKSASSST
Sbjct: 1   MAGIGPLTQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETVKKSTAGSNKSASSST 60

Query: 61  SLNTRKLDEETENLSHDRVPTELKKAIIQARTEKKLTQSQLAQLINEKPQIIQEYESGKA 120
           SLNTRKLDEETENL+HDRVPTELKKAI+QARTEKKLTQSQLAQLINEKPQ+IQEYESGKA
Sbjct: 61  SLNTRKLDEETENLTHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQVIQEYESGKA 120

Query: 121 IPNQQVITKLERALGAKLRGKK 143
           IPNQQ+ITKLERALGAKLRGKK
Sbjct: 121 IPNQQIITKLERALGAKLRGKK 142

[Close]

BLAST of Sed0020959 vs. ExPASy TrEMBL
Match: A0A6J1FUR1 (multiprotein-bridging factor 1b OS=Cucurbita moschata OX=3662 GN=LOC111448304 PE=4 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 7.8e-63
Identity = 134/142 (94.37%), Postives = 141/142 (99.30%), Query Frame = 0


Query: 1   MAGTGPLSQDWEPVVLRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSTAGSNKSASSST 60
           MAG GPL+QDWEPVV+RKKAPNAAAKKDEKAVNAARRAGAEIET+KKSTAGSNKSASSST
Sbjct: 1   MAGIGPLTQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETVKKSTAGSNKSASSST 60

Query: 61  SLNTRKLDEETENLSHDRVPTELKKAIIQARTEKKLTQSQLAQLINEKPQIIQEYESGKA 120
           SLNTRKLDEETENL+HDRVPTELKKAI+QARTEKKLTQSQLAQLINEKPQ+IQEYESGKA
Sbjct: 61  SLNTRKLDEETENLTHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQVIQEYESGKA 120

Query: 121 IPNQQVITKLERALGAKLRGKK 143
           IPNQQ+ITKLERALGAKLRGKK
Sbjct: 121 IPNQQIITKLERALGAKLRGKK 142

[Close]

BLAST of Sed0020959 vs. ExPASy TrEMBL
Match: A0A6J1D976 (multiprotein-bridging factor 1b-like OS=Momordica charantia OX=3673 GN=LOC111018072 PE=4 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 1.3e-62
Identity = 135/142 (95.07%), Postives = 140/142 (98.59%), Query Frame = 0


Query: 1   MAGTGPLSQDWEPVVLRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSTAGSNKSASSST 60
           MAG GPLSQDWEPVVLRKKAPNAAAKKDEKAVNAARRAGAEIETIKKS AGSNKSASSST
Sbjct: 1   MAGIGPLSQDWEPVVLRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAGSNKSASSST 60

Query: 61  SLNTRKLDEETENLSHDRVPTELKKAIIQARTEKKLTQSQLAQLINEKPQIIQEYESGKA 120
           SLNTRKLDEETENLSHDRVPTELKKAI+QARTEKKLTQSQLAQLINEKPQ+IQ+YE+GKA
Sbjct: 61  SLNTRKLDEETENLSHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQVIQDYEAGKA 120

Query: 121 IPNQQVITKLERALGAKLRGKK 143
           IPNQQ+ITKLERALGAKLRGKK
Sbjct: 121 IPNQQIITKLERALGAKLRGKK 142

[Close]

BLAST of Sed0020959 vs. ExPASy TrEMBL
Match: A0A5A7V8Z5 (Multiprotein-bridging factor 1b OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold143G00720 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 1.7e-62
Identity = 135/142 (95.07%), Postives = 139/142 (97.89%), Query Frame = 0


Query: 1   MAGTGPLSQDWEPVVLRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSTAGSNKSASSST 60
           MAG GPLSQDWEPVV+RKKAPNAAAKKDEKAVNAARRAGAEIETIKKS AGSNKSASSST
Sbjct: 1   MAGIGPLSQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAGSNKSASSST 60

Query: 61  SLNTRKLDEETENLSHDRVPTELKKAIIQARTEKKLTQSQLAQLINEKPQIIQEYESGKA 120
           SLNTRKLDEETENLSHDRVPTELKKAI+ ARTEKKLTQSQLAQLINEKPQ+IQEYESGKA
Sbjct: 61  SLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQLINEKPQVIQEYESGKA 120

Query: 121 IPNQQVITKLERALGAKLRGKK 143
           IPNQQ+ITKLERALGAKLRGKK
Sbjct: 121 IPNQQIITKLERALGAKLRGKK 142

[Close]

BLAST of Sed0020959 vs. ExPASy TrEMBL
Match: A0A1S3BIN6 (multiprotein-bridging factor 1b OS=Cucumis melo OX=3656 GN=LOC103490498 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 1.7e-62
Identity = 135/142 (95.07%), Postives = 139/142 (97.89%), Query Frame = 0


Query: 1   MAGTGPLSQDWEPVVLRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSTAGSNKSASSST 60
           MAG GPLSQDWEPVV+RKKAPNAAAKKDEKAVNAARRAGAEIETIKKS AGSNKSASSST
Sbjct: 1   MAGIGPLSQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAGSNKSASSST 60

Query: 61  SLNTRKLDEETENLSHDRVPTELKKAIIQARTEKKLTQSQLAQLINEKPQIIQEYESGKA 120
           SLNTRKLDEETENLSHDRVPTELKKAI+ ARTEKKLTQSQLAQLINEKPQ+IQEYESGKA
Sbjct: 61  SLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQLINEKPQVIQEYESGKA 120

Query: 121 IPNQQVITKLERALGAKLRGKK 143
           IPNQQ+ITKLERALGAKLRGKK
Sbjct: 121 IPNQQIITKLERALGAKLRGKK 142

[Close]

BLAST of Sed0020959 vs. TAIR 10
Match: AT3G58680.1 (multiprotein bridging factor 1B )

HSP 1 Score: 225.3 bits (573), Expect = 3.0e-59
Identity = 117/142 (82.39%), Postives = 135/142 (95.07%), Query Frame = 0


Query: 1   MAGTGPLSQDWEPVVLRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSTAGSNKSASSST 60
           MAG GP++QDWEPVV+RK+APNAAAK+DEK VNAARR+GA+IET++K  AGSNK+ASS T
Sbjct: 1   MAGIGPITQDWEPVVIRKRAPNAAAKRDEKTVNAARRSGADIETVRKFNAGSNKAASSGT 60

Query: 61  SLNTRKLDEETENLSHDRVPTELKKAIIQARTEKKLTQSQLAQLINEKPQIIQEYESGKA 120
           SLNT+KLD++TENLSHDRVPTELKKAI+QAR EKKLTQSQLA LINEKPQ+IQEYESGKA
Sbjct: 61  SLNTKKLDDDTENLSHDRVPTELKKAIMQARGEKKLTQSQLAHLINEKPQVIQEYESGKA 120

Query: 121 IPNQQVITKLERALGAKLRGKK 143
           IPNQQ+++KLERALGAKLRGKK
Sbjct: 121 IPNQQILSKLERALGAKLRGKK 142

[Close]

BLAST of Sed0020959 vs. TAIR 10
Match: AT2G42680.1 (multiprotein bridging factor 1A )

HSP 1 Score: 218.0 bits (554), Expect = 4.9e-57
Identity = 112/142 (78.87%), Postives = 134/142 (94.37%), Query Frame = 0


Query: 1   MAGTGPLSQDWEPVVLRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSTAGSNKSASSST 60
           MAG GP++QDWEPVV+RKK  NAAAK+DEK VNAARR+GA+IET++K  AG+NK+ASS T
Sbjct: 1   MAGIGPITQDWEPVVIRKKPANAAAKRDEKTVNAARRSGADIETVRKFNAGTNKAASSGT 60

Query: 61  SLNTRKLDEETENLSHDRVPTELKKAIIQARTEKKLTQSQLAQLINEKPQIIQEYESGKA 120
           SLNT+ LD++TENL+H+RVPTELKKAI+QART+KKLTQSQLAQ+INEKPQ+IQEYESGKA
Sbjct: 61  SLNTKMLDDDTENLTHERVPTELKKAIMQARTDKKLTQSQLAQIINEKPQVIQEYESGKA 120

Query: 121 IPNQQVITKLERALGAKLRGKK 143
           IPNQQ+++KLERALGAKLRGKK
Sbjct: 121 IPNQQILSKLERALGAKLRGKK 142

[Close]

BLAST of Sed0020959 vs. TAIR 10
Match: AT3G24500.1 (multiprotein bridging factor 1C )

HSP 1 Score: 131.3 bits (329), Expect = 6.0e-31
Identity = 73/139 (52.52%), Postives = 100/139 (71.94%), Query Frame = 0


Query: 5   GPLSQDWEPVVLRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSTAGSNKSASSST--SL 64
           G ++QDWEPVVL K    +   +D KAVNAA R G  ++T+KK  AGSNK   S+    +
Sbjct: 7   GAVTQDWEPVVLHKSKQKSQDLRDPKAVNAALRNGVAVQTVKKFDAGSNKKGKSTAVPVI 66

Query: 65  NTRKLDEETENLSHDRVPTELKKAIIQARTEKKLTQSQLAQLINEKPQIIQEYESGKAIP 124
           NT+KL+EETE  + DRV  E++  I +AR EKK++Q+ LA+ INE+ Q++QEYE+GKA+P
Sbjct: 67  NTKKLEEETEPAAMDRVKAEVRLMIQKARLEKKMSQADLAKQINERTQVVQEYENGKAVP 126

Query: 125 NQQVITKLERALGAKLRGK 142
           NQ V+ K+E+ LG KLRGK
Sbjct: 127 NQAVLAKMEKVLGVKLRGK 145

[Close]

BLAST of Sed0020959 vs. TAIR 10
Match: AT3G24500.2 (multiprotein bridging factor 1C )

HSP 1 Score: 66.2 bits (160), Expect = 2.4e-11
Identity = 40/82 (48.78%), Postives = 54/82 (65.85%), Query Frame = 0


Query: 5  GPLSQDWEPVVLRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSTAGSNKSASSST--SL 64
          G ++QDWEPVVL K    +   +D KAVNAA R G  ++T+KK  AGSNK   S+    +
Sbjct: 7  GAVTQDWEPVVLHKSKQKSQDLRDPKAVNAALRNGVAVQTVKKFDAGSNKKGKSTAVPVI 66

Query: 65 NTRKLDEETENLSHDRVPTELK 85
          NT+KL+EETE  + DRV  E++
Sbjct: 67 NTKKLEEETEPAAMDRVKAEVR 88

The following BLAST results are available for this feature:

BLAST of Sed0020959 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022943574.1	1.6e-62	94.37	multiprotein-bridging factor 1b [Cucurbita moschata] >XP_022986044.1 multiprotei...	[more]
XP_022149711.1	2.8e-62	95.07	multiprotein-bridging factor 1b-like [Momordica charantia]	[more]
XP_008448251.1	3.6e-62	95.07	PREDICTED: multiprotein-bridging factor 1b [Cucumis melo] >KAA0062161.1 multipro...	[more]
XP_004149278.1	8.0e-62	94.37	multiprotein-bridging factor 1b [Cucumis sativus] >KGN46986.1 hypothetical prote...	[more]
XP_023533868.1	1.4e-61	95.07	multiprotein-bridging factor 1b-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0020959 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LXT3	4.3e-58	82.39	Multiprotein-bridging factor 1b OS=Arabidopsis thaliana OX=3702 GN=MBF1B PE=1 SV...	[more]
Q9SJI8	6.8e-56	78.87	Multiprotein-bridging factor 1a OS=Arabidopsis thaliana OX=3702 GN=MBF1A PE=2 SV...	[more]
Q9LV58	8.4e-30	52.52	Multiprotein-bridging factor 1c OS=Arabidopsis thaliana OX=3702 GN=MBF1C PE=1 SV...	[more]
Q5ZMC0	1.6e-28	57.89	Endothelial differentiation-related factor 1 homolog OS=Gallus gallus OX=9031 GN...	[more]
Q6GPQ6	1.6e-28	57.14	Endothelial differentiation-related factor 1 homolog OS=Xenopus laevis OX=8355 G...	[more]

BLAST of Sed0020959 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JEZ7	7.8e-63	94.37	multiprotein-bridging factor 1b OS=Cucurbita maxima OX=3661 GN=LOC111483898 PE=4...	[more]
A0A6J1FUR1	7.8e-63	94.37	multiprotein-bridging factor 1b OS=Cucurbita moschata OX=3662 GN=LOC111448304 PE...	[more]
A0A6J1D976	1.3e-62	95.07	multiprotein-bridging factor 1b-like OS=Momordica charantia OX=3673 GN=LOC111018...	[more]
A0A5A7V8Z5	1.7e-62	95.07	Multiprotein-bridging factor 1b OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3BIN6	1.7e-62	95.07	multiprotein-bridging factor 1b OS=Cucumis melo OX=3656 GN=LOC103490498 PE=4 SV=...	[more]

BLAST of Sed0020959 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G58680.1	3.0e-59	82.39	multiprotein bridging factor 1B	[more]
AT2G42680.1	4.9e-57	78.87	multiprotein bridging factor 1A	[more]
AT3G24500.1	6.0e-31	52.52	multiprotein bridging factor 1C	[more]
AT3G24500.2	2.4e-11	48.78	multiprotein bridging factor 1C	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 87..107
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..43
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 46..64
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..78
None	No IPR available	PANTHER	PTHR10245:SF118	MULTIPROTEIN BRIDGING FACTOR 1B	coord: 1..142
None	No IPR available	PANTHER	PTHR10245	ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 MULTIPROTEIN BRIDGING FACTOR 1	coord: 1..142
IPR001387	Cro/C1-type helix-turn-helix domain	SMART	SM00530	mbf_short4	coord: 86..141 e-value: 1.9E-10 score: 50.7
IPR001387	Cro/C1-type helix-turn-helix domain	PFAM	PF01381	HTH_3	coord: 87..137 e-value: 4.9E-12 score: 45.7
IPR001387	Cro/C1-type helix-turn-helix domain	PROSITE	PS50943	HTH_CROC1	coord: 87..141 score: 12.962883
IPR001387	Cro/C1-type helix-turn-helix domain	CDD	cd00093	HTH_XRE	coord: 85..135 e-value: 3.68884E-9 score: 47.933
IPR010982	Lambda repressor-like, DNA-binding domain superfamily	GENE3D	1.10.260.40		coord: 71..142 e-value: 4.0E-29 score: 101.9
IPR010982	Lambda repressor-like, DNA-binding domain superfamily	SUPERFAMILY	47413	lambda repressor-like DNA-binding domains	coord: 80..138
IPR013729	Multiprotein bridging factor 1, N-terminal	PFAM	PF08523	MBF1	coord: 9..79 e-value: 3.2E-23 score: 82.0

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0020959.1	Sed0020959.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding