Sed0020927 (gene) Chayote v1

Overview


Name	Sed0020927
Type	gene
Organism	Sechium edule (Chayote v1)
Description	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like
Location	LG01: 16221404 .. 16227377 (+)
RNA-Seq Expression	Sed0020927
Synteny	Sed0020927

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGGATGGGATTTTCATCTTTCTTCTCCACTGCAATAAAACCTCAATTTTTATTTTTCTTTTTTGAACCATCAAAATTTCCAATTTTCATTTTGATCCTTTTTTATCAATTTGCCAAAATTGCTCAATAATTCGAACCCTTCCCTTACTTCTCCCACTCCTAATTTTTGTTGATCTCAAAAACTGATCATGTCAACAGAAGGGCGAAAAGATTCGACGTCGGGGGCGGGATCGTCGTCATCGAGAACAACAGCGGCGGGGCTGGGAAACCAGCAGCCGCAAACGGTGACGGCGCTGAGCCGTTACGAGTCACAGAAACGGCGTGATTGGAACACGTTCGGACAGTATCTGAAGAACCAAACGCCGCCGGTTTCGCTGTCGGAGTGCAACTGCAACCACGTGCTGGAATTCCTTCGGTACCTCGACCAGTTCGGAAAAACTAAGGTTCATTTACATGGCTGTGTCTTTTTCGGTCAGCCCGACCCACCTGCCCCTTGCACCTGCCCGCTTCGCCAAGCATGGGGCAGCCTCGACGCTCTGATTGGCCGCCTTCGGGCTGCCTATGAGGAGAACGGTGGATCGCCCGACACGAACCCTTTTGGAAACGGATCGATTCGAGTGTATCTACGCGAAGTCAAGGAGTGTCAAGCTAAGGCTAGAGGAATTCCTTACAAGAAAAAGAAGAGAAAAAGAGCTCAATTGAAGCCTAATCATGACCACAACGTTCATCTTGCTTGATCTTCTCAATTCCTGGTACTTTCTTTTTCCCCCCTATTTTTATTTATTTTTTATTTATTATTATTATTATTATTATAATTAGCCTTCGAAGACTTCATTTTCAATTCAATAATTGTTTTCAAATCAATTATTGGTTAAACTTCATAGTCTACCCAAACTGATTTGGAGTTGTGTGATTTTTGTAGATAAATAAAGGGAAAATAAAACCCTAGAATCCAGTTTTTTTTAAAAAAAACCCTAATTTTAATTTGGATCAATCTGTTAATTATTAGAACATGTTATGAATTACCATACATAAAACCTTGTTTACATGAAACAAGCAAAACAAAACGACATACAAAGAAAGAACTATATATATATATATCAGTAGCCACTATGTTTGAATTGTGGAACCGTACGCTCTCTTTTTTTCTTTTTTTCTCTCTCTCTCTCTCTCAACTACTTTTTTTTTTTTTTTTTTTTATAATTTGACTTCATCAAATATACTTAATTTAAATTCTCACCTTTTACTAGTTTTGACCCTTTTGTGATTCTGTCCGATTTTTTTGCTCCTCATGTATCGATGAAATGACCATTATATATTATATATATAAATTTATATACATGATTTATATAGGGATCATATAAAATGCACCTACTTATAATAATTGGCTTCTATCATTCATTGATTAAGAAGTCACAAATTCGAATTCTCAACTCTGTCTTATATTATACATGTGAATTTTCTTTGCTAGTGGTTTTCTCCTCTAATTCTTATTTTTTCAATTAATTCTCTTTTCTTTTCCCAGTTTTAAACTCTGCATTTTGTTATACATTTTTAAATAAAACCCACCTCTCCAAAAATATAAAAGAGAAAAGAAAAAAAAAGTTAAATTGTCTCCCTTTTTATGTTTGATTTATGTATGAATCAATGGAACATCACGGGAACTTTTGTTTCTAACAGTGGTTCTTTTGACACAAAGTTTGATGGTAGGAGAGCAATGTGTTTTCGTACTGATTCCACTGAAATATATATATGGAATTTGCTGTGGATTTAATTATGTGGTATAAAAGATTATTTACTAGCTGTTTTCTTTTAGAAGGGAAAGATATTATATATGTATGGTACTAAAGCATGAATTAGTATTTTTCTTTTCTGTGGAAAATATAGATTTGGGTTCACTTTTCTATATCTCAAGATATTCTAGTTTTCTGGTTTAGATTTTAAAAGCCTTCTTAACCATTAACTCTAGATTCTTCTAAAGATTTGAGAATTTCAACTAAGTTCTTTAAACTGAATTAATTAGTGCATGTTGATTTATACAACGACAGGGAAGGAGGATTTGAACCTGTAATCTCATGATTATTAGTTACAAGATGTTAATCTTAATATATATATATATATATATATATATATATATATATATATATATTAGTCTTCATTGAACAAGAAAAAATAATTGATAACTTAACATATATAATGACCAGATTTCTAATTAGTAACCTCATAGCATTTAGAAATGGTTGTGGTGGGATTAAAGATTTAATTTTCCTTTTTTGTTTTAGTGTTTTCTTTATTGCTATTGCAATACAAAATCTTTCATTAGTAAGATTGATTGCTGACAGGTTTGAGATAATTATTATTTTGATCTATATTTACTAAAAGTGAACCCAGCTAAATAAATCAACTCAACACTAGAAAAAATTATTTCCAAAATTTTGGACTTATTAATTGGTTTGTGATCTAGATTGAGTTCTTGTCTTATTACTAGACATAAGAAAAATAGGAAATATTTACTAGTTTGACATTATTGAATATGGAAGCCATTATTAAGCTATAATTCCAAATATGATTCTTTAAAACATAACTGTTTTTAGACATTGAACAGTTGCATTTAATATTTTCAAATTTTATAGACCTTATCGTTTTCTAGGAAATGATACAGGGTTGGAAATCTCTTTACGCAATTAAAAAGGTGAAGCTTTCTCAACATATTTTATTCTAATTTATATAATATGATACTCGACTTACAAATTTGGATTTGATATCTATGTAAATGTCTAGATCAACTTACATGTATCTCGACTATTTAAACAAGACATACTGCCATGATGATCGTGGATTGAAACCATAACTATTTGACTTCTTAACGTCTTTTTGACTATTTGACGTCTTGTAATTTTTCTTCTATGCTAGGCATGCCTATCAATATATTGTTTCTTTTTTCCAAAAAAATAGTGGTCAATTTGATCCCTATAAAATGAACTTTCCTTTTTCAATTTATGAAAAGTATAAATTATTTAGTTGTTTAGTTGTTTATATCTTGAAAATTGAGTTTCTTCGTAACAATTAGTTTATTTTTTCGAAACATTCGTAACAATTAGTTGTTATCTAGTTGATACAAATATTTTCTAAATGCATGTCAAATTTTCTCGTTTTTGTCGATTTACTTTTGAAAAATGACATTTTGGTACCGTCATTTCATTTATCTCTTTTTTGGTGGATAGTATGCATTATATGTATACATTTTTTGAAAAGTTAGTATGCATTATATTTATACCTTTATAGAATTTAAAATTTTGTTATGTCTTGATTTTTAACATTTAATAGATAAGTGTGTGTATATATAGTAGAACTATATCGTAAAATTTCTTGGATTTCACAAAGTAGAAAATTTCTTAATTCTAAATGTTTTAAGTTCAATACCTTAGATATATACAATAATTTATTATAGTTTGACAAGATATAAATATATAAGTTCGAATATCCTCCCCCAAAAAGCTTATTATAGTTTCACCATTACATTGTTTGAATGAAATGAAAATTTGTACTTTTCGAAATATAGAGTATATTATACAACCCAACATTTAAATTTGTATGCATAAGTATTTTTTGCATCATCTAATAATATTTGCCATAATCATATTTTGTTCCTTGATTGATCTAATTACTCCTTTTCATTTCCTTGATCCCTTATTTATTTCAAATCAATTCAACCATTTGGAGCTTCATTAGTTGTTTCTTAGGAGACCATTGTAATTAATTTTTGTGTCGTTTTTGTTCCCTTTTCAGGTTAATTATAATTTGAAGAAAAAACAAATATGGTACATTATGTAATGAAAAAAAATCATATTCTGAATATTATATTAAGAACATTAAGGATCTTTGAATACTTTTTTTATAATATATAAACTCGTTTACTAAGAACCCGTTACATAACCATTTTTTTTTTTTCATTTTTTGTTTATGAAATTTAAGTCTACAACAACTATCTCAGTATACATTTTTCTTTATTTGGATATCTATAACTTACCTATCTTTTAATAAACAAAACCAAAATTTGTAAACAAAAAAAAAGTAGCTTATAAAAACTTGTTTTTGTTTTTGAAATTTGGTTAGCTTTCACTTACTTTCTTAAAGAAATATGGATACATTGTAAAAAGGATGGAGCACTGGTAGAAAATTTGAGTAGAAATAGGCTTAAATTTCATAAACAAAAAATGAAAAATCAAATGGTTATCAAATGGGGCTTAATCTTTTTATGTTCTTAACAATTTATAACAAATATTTGAAAGCTTTTCTATCATTTTCCATTTTAAGTCTAAGGAATTTAAGGTCGATTTTTTTTTTTTTGGTTAAATGTAAAAAAAATATATTATCAGACCCAGCTATATAAAATTACCAACAAATTCCATCAAAACCATTAAGTAATTCTATTACAAGAAAACTCACTATTGAAGATTGGAAAATTAGATAGTCCAATTTTACAAAATAATTTTAGATTTAGACAAATTTAAAATTATTTATATCTTGGTCAATATACGGTATAATTAATATTCATCGTACAATATAGTTTAGGGTATTAATACAGTATTTTGTATTATTAATACAATATTATATGTTATTAGTACATTATGATATGACTATGATTTTTTTTTTTGTAAATATTTTTTCAATTTTGACTACTCCTAAAAATACCCATAGAAGATTTTGGGAGAGATTTGAAAAAGGAGAGGAATATTAACCGTTTAAAATCTTAAACTAATTGAATTGAATTACAACTATGAACCTCACATCACCAACCCCTTAATTTGATATGATAAAATCACCATTGTTAAAAAAAATAATTATAATAATTTATCCTTATTAGTTTCATCTTTTCGAACTAGTAATAAGTTAATTAAAGAAAAAGAGATCTTCAAACATCTATAATATTGTTTTCGGTTCATTTCTTATACTATTTTATAGGTTTTTTTTAATAATCAGATGATATTTTATAGGTTAAACTATGTGTTAAATAATATATCAAATTAACGGTTGAAGATGCTCACTTTGTGGTAATTTTCTCATTAGATAGACAAAGATATCTCAACCTCTTTAAAAGAGATATGAGTTACTTCTCTCATTGTCAACTGATTTTGGAGTGGAACCACACATATCATCTAATATGGTATTAGAAGTCAATATGGGTAGTGACCTCCAAAATTTTAATCCGATCCTAGCATAAAGTAAGTCAAACCAGGTATTTCCGTCCATAAATTTGGATCGTTCCAAGATAGTCTTCCCTGTGTGGCGCAATCTTGAGGGAAGGATCCCATATCATCTAATAGTAACTCTAAACTTAGCCATTGAAAATCCTAGTAGCTATTTAACAATCTCTTCAAGAAAAAAGAAACACTGATATCCTTTCCAGTCATTTATGTGTTGAATTATCTTTAATAACCAAGTTGGAACTCTAGCTTAATAATTTTGTGTTTTAGTTCAACAATTAAAGATTTAAAGTGATGAGTTGAATTATATTCTTGTCGATCAAATTGTTGTATGTTTTTTAAATCATGGACAATATATCTTGCAATGTGTTGCATTTACGGTTGGTAAAGCTTTATTAAAAAAAATTCATATTTTCTTAATTTCAGGACAAGAAAGCAACCGATCGAAAGTGTATAAATGTGGAACGAGTTGAAGGGCTTTCTATCTGATAAAATACTTATGTTGTAGAGTTAATTATATAAAGAAAGAGAATTAAAAAAAAAAAAAAAAAAAATTAGCATAGTATGTAGCCAAAGCTGGTTTAGCAATCAATGTGTTTGCTTCCATTCTAGTTAATCAAAAAAATGCCTCCCCAACGTGTAAGTTCACTTTTTAATTATTCTATATTAGAGGGTGACGATCAAGACTATACAATATAGCTCTTTTAAGAAGAAAAATATCATTTCTATTTTTCATTTTTCATAAAATATCACCTGCCCTTTTTTGC

mRNA sequence

CAGGATGGGATTTTCATCTTTCTTCTCCACTGCAATAAAACCTCAATTTTTATTTTTCTTTTTTGAACCATCAAAATTTCCAATTTTCATTTTGATCCTTTTTTATCAATTTGCCAAAATTGCTCAATAATTCGAACCCTTCCCTTACTTCTCCCACTCCTAATTTTTGTTGATCTCAAAAACTGATCATGTCAACAGAAGGGCGAAAAGATTCGACGTCGGGGGCGGGATCGTCGTCATCGAGAACAACAGCGGCGGGGCTGGGAAACCAGCAGCCGCAAACGGTGACGGCGCTGAGCCGTTACGAGTCACAGAAACGGCGTGATTGGAACACGTTCGGACAGTATCTGAAGAACCAAACGCCGCCGGTTTCGCTGTCGGAGTGCAACTGCAACCACGTGCTGGAATTCCTTCGGTACCTCGACCAGTTCGGAAAAACTAAGGTTCATTTACATGGCTGTGTCTTTTTCGGTCAGCCCGACCCACCTGCCCCTTGCACCTGCCCGCTTCGCCAAGCATGGGGCAGCCTCGACGCTCTGATTGGCCGCCTTCGGGCTGCCTATGAGGAGAACGGTGGATCGCCCGACACGAACCCTTTTGGAAACGGATCGATTCGAGTGTATCTACGCGAAGTCAAGGAGTGTCAAGCTAAGGCTAGAGGAATTCCTTACAAGAAAAAGAAGAGAAAAAGAGCTCAATTGAAGCCTAATCATGACCACAACGTTCATCTTGCTTGATCTTCTCAATTCCTGGACAAGAAAGCAACCGATCGAAAGTGTATAAATGTGGAACGAGTTGAAGGGCTTTCTATCTGATAAAATACTTATGTTGTAGAGTTAATTATATAAAGAAAGAGAATTAAAAAAAAAAAAAAAAAAAATTAGCATAGTATGTAGCCAAAGCTGGTTTAGCAATCAATGTGTTTGCTTCCATTCTAGTTAATCAAAAAAATGCCTCCCCAACGTGTAAGTTCACTTTTTAATTATTCTATATTAGAGGGTGACGATCAAGACTATACAATATAGCTCTTTTAAGAAGAAAAATATCATTTCTATTTTTCATTTTTCATAAAATATCACCTGCCCTTTTTTGC

Coding sequence (CDS)

ATGTCAACAGAAGGGCGAAAAGATTCGACGTCGGGGGCGGGATCGTCGTCATCGAGAACAACAGCGGCGGGGCTGGGAAACCAGCAGCCGCAAACGGTGACGGCGCTGAGCCGTTACGAGTCACAGAAACGGCGTGATTGGAACACGTTCGGACAGTATCTGAAGAACCAAACGCCGCCGGTTTCGCTGTCGGAGTGCAACTGCAACCACGTGCTGGAATTCCTTCGGTACCTCGACCAGTTCGGAAAAACTAAGGTTCATTTACATGGCTGTGTCTTTTTCGGTCAGCCCGACCCACCTGCCCCTTGCACCTGCCCGCTTCGCCAAGCATGGGGCAGCCTCGACGCTCTGATTGGCCGCCTTCGGGCTGCCTATGAGGAGAACGGTGGATCGCCCGACACGAACCCTTTTGGAAACGGATCGATTCGAGTGTATCTACGCGAAGTCAAGGAGTGTCAAGCTAAGGCTAGAGGAATTCCTTACAAGAAAAAGAAGAGAAAAAGAGCTCAATTGAAGCCTAATCATGACCACAACGTTCATCTTGCTTGA

Protein sequence

MSTEGRKDSTSGAGSSSSRTTAAGLGNQQPQTVTALSRYESQKRRDWNTFGQYLKNQTPPVSLSECNCNHVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEENGGSPDTNPFGNGSIRVYLREVKECQAKARGIPYKKKKRKRAQLKPNHDHNVHLA

Homology

[Close]

BLAST of Sed0020927 vs. NCBI nr
Match: XP_038896042.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Benincasa hispida] >XP_038896043.1 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Benincasa hispida])

HSP 1 Score: 313.9 bits (803), Expect = 8.9e-82
Identity = 156/178 (87.64%), Postives = 161/178 (90.45%), Query Frame = 0


Query: 1   MSTEGRKDSTSGAGSSSSRTTAAGLGNQQPQTVTALSRYESQKRRDWNTFGQYLKNQTPP 60
           MSTEGRKDST+ AGSSS   TAAG       T TALSRYESQKRRDWNTFGQYLKNQTPP
Sbjct: 1   MSTEGRKDSTTEAGSSS--RTAAG-------TTTALSRYESQKRRDWNTFGQYLKNQTPP 60

Query: 61  VSLSECNCNHVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGR 120
           V LS+CNCNHVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGR
Sbjct: 61  VPLSQCNCNHVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGR 120

Query: 121 LRAAYEENGGSPDTNPFGNGSIRVYLREVKECQAKARGIPYKKKKRKRAQLKPNHDHN 179
           LRAAYEE+GGSP+TNPFGNG+IRVYLREVKECQAKARGIPYKKKKRKR QLK N D N
Sbjct: 121 LRAAYEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKKRKRTQLKSNDDDN 169

[Close]

BLAST of Sed0020927 vs. NCBI nr
Match: XP_022927073.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Cucurbita moschata])

HSP 1 Score: 312.4 bits (799), Expect = 2.6e-81
Identity = 153/181 (84.53%), Postives = 163/181 (90.06%), Query Frame = 0


Query: 1   MSTEGRKDSTSGAGSSSSRTTA---AGLGNQQPQTVTALSRYESQKRRDWNTFGQYLKNQ 60
           MSTEGRKDST   G SSSRT A   A    QQ QT  ALSRYESQK+RDWNTFGQYLKNQ
Sbjct: 2   MSTEGRKDSTE--GGSSSRTAAGSSAAADQQQQQTSAALSRYESQKKRDWNTFGQYLKNQ 61

Query: 61  TPPVSLSECNCNHVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDAL 120
           TPPV+LS+CNCNHV+EF+RYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDAL
Sbjct: 62  TPPVALSQCNCNHVVEFMRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDAL 121

Query: 121 IGRLRAAYEENGGSPDTNPFGNGSIRVYLREVKECQAKARGIPYKKKKRKRAQLKPNHDH 179
           IGRLRAAYEE+GGSP+TNPFGNG+IRVYLREVKECQAKARGIPYKKKKRKR+QLK N + 
Sbjct: 122 IGRLRAAYEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKKRKRSQLKGNEED 180

[Close]

BLAST of Sed0020927 vs. NCBI nr
Match: XP_022140104.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Momordica charantia] >XP_022140105.1 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Momordica charantia])

HSP 1 Score: 311.2 bits (796), Expect = 5.8e-81
Identity = 155/185 (83.78%), Postives = 162/185 (87.57%), Query Frame = 0


Query: 1   MSTEGRKDSTSGAGSSSSRTTAAGLGNQQPQTVTALSRYESQKRRDWNTFGQYLKNQTPP 60
           MSTE RKDST  AGSSSS    A   +      TALSRYESQKRRDWNTFGQYLKNQTPP
Sbjct: 1   MSTEARKDSTEAAGSSSSMRPGAAADH----PTTALSRYESQKRRDWNTFGQYLKNQTPP 60

Query: 61  VSLSECNCNHVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGR 120
           V+LS+CNCNHVLEFLRYLDQFGKTKVHL GCVFFGQPDPPAPCTCPLRQAWGSLDALIGR
Sbjct: 61  VALSQCNCNHVLEFLRYLDQFGKTKVHLPGCVFFGQPDPPAPCTCPLRQAWGSLDALIGR 120

Query: 121 LRAAYEENGGSPDTNPFGNGSIRVYLREVKECQAKARGIPYKKKKRKRAQLKPNH----D 180
           LRAAYEE+GGSP+TNPFGNG+IRVYLREVKECQAKARGIPYKKKKRKRAQLKPN+    D
Sbjct: 121 LRAAYEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKKRKRAQLKPNNDDHQD 180

Query: 181 HNVHL 182
           H  HL
Sbjct: 181 HKNHL 181

[Close]

BLAST of Sed0020927 vs. NCBI nr
Match: KAG6583960.1 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 309.3 bits (791), Expect = 2.2e-80
Identity = 152/185 (82.16%), Postives = 162/185 (87.57%), Query Frame = 0


Query: 1   MSTEGRKDSTSGAGSSSSRTTAAGLG-------NQQPQTVTALSRYESQKRRDWNTFGQY 60
           MSTEGRKDST   G SSSRT A            QQ QT  ALSRYESQK+RDWNTFGQY
Sbjct: 1   MSTEGRKDSTE--GGSSSRTAAGSSAAADQQQQQQQQQTSAALSRYESQKKRDWNTFGQY 60

Query: 61  LKNQTPPVSLSECNCNHVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGS 120
           LKNQTPPV+LS+CNCNHV+EF+RYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGS
Sbjct: 61  LKNQTPPVALSQCNCNHVVEFMRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGS 120

Query: 121 LDALIGRLRAAYEENGGSPDTNPFGNGSIRVYLREVKECQAKARGIPYKKKKRKRAQLKP 179
           LDALIGRLRAAYEE+GGSP+TNPFGNG+IRVYLREVKECQAKARGIPYKKKKRKR+QLK 
Sbjct: 121 LDALIGRLRAAYEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKKRKRSQLKG 180

[Close]

BLAST of Sed0020927 vs. NCBI nr
Match: KAG7019578.1 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 308.9 bits (790), Expect = 2.9e-80
Identity = 152/186 (81.72%), Postives = 162/186 (87.10%), Query Frame = 0


Query: 1   MSTEGRKDSTSGAGSSSSRTTAAGLG--------NQQPQTVTALSRYESQKRRDWNTFGQ 60
           MSTEGRKDST   G SSSRT A             QQ QT  ALSRYESQK+RDWNTFGQ
Sbjct: 2   MSTEGRKDSTE--GGSSSRTAAGSSAAADQQQQQQQQQQTSAALSRYESQKKRDWNTFGQ 61

Query: 61  YLKNQTPPVSLSECNCNHVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWG 120
           YLKNQTPPV+LS+CNCNHV+EF+RYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWG
Sbjct: 62  YLKNQTPPVALSQCNCNHVVEFMRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWG 121

Query: 121 SLDALIGRLRAAYEENGGSPDTNPFGNGSIRVYLREVKECQAKARGIPYKKKKRKRAQLK 179
           SLDALIGRLRAAYEE+GGSP+TNPFGNG+IRVYLREVKECQAKARGIPYKKKKRKR+QLK
Sbjct: 122 SLDALIGRLRAAYEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKKRKRSQLK 181

[Close]

BLAST of Sed0020927 vs. ExPASy Swiss-Prot
Match: Q9S7R3 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 OS=Arabidopsis thaliana OX=3702 GN=LSH10 PE=1 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 2.9e-67
Identity = 116/143 (81.12%), Postives = 131/143 (91.61%), Query Frame = 0


Query: 26  GNQQPQTVTALSRYESQKRRDWNTFGQYLKNQTPPVSLSECNCNHVLEFLRYLDQFGKTK 85
           G++ P T    SRYESQKRRDWNTFGQYLKNQ PPV +S C+CNHVL+FLRYLDQFGKTK
Sbjct: 16  GSEPPVTP---SRYESQKRRDWNTFGQYLKNQRPPVPMSHCSCNHVLDFLRYLDQFGKTK 75

Query: 86  VHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEENGGSPDTNPFGNGSIRVY 145
           VH+ GC+F+GQP+PPAPCTCPLRQAWGSLDALIGRLRAAYEENGG P+TNPF +G+IRVY
Sbjct: 76  VHVPGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEENGGPPETNPFASGAIRVY 135

Query: 146 LREVKECQAKARGIPYKKKKRKR 169
           LREV+ECQAKARGIPYKKKK+K+
Sbjct: 136 LREVRECQAKARGIPYKKKKKKK 155

[Close]

BLAST of Sed0020927 vs. ExPASy Swiss-Prot
Match: Q9LW68 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4 OS=Arabidopsis thaliana OX=3702 GN=LSH4 PE=1 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 5.3e-61
Identity = 114/160 (71.25%), Postives = 132/160 (82.50%), Query Frame = 0


Query: 9   STSGAGSSSSRTTAAGLGNQQPQTVTALSRYESQKRRDWNTFGQYLKNQTPPVSLSECNC 68
           +T+   SSSS +++ G G  Q      LSRYE+QKRRDWNTFGQYL+N  PP+SLS C+ 
Sbjct: 25  ATTTTTSSSSSSSSGGSGTNQ------LSRYENQKRRDWNTFGQYLRNHRPPLSLSRCSG 84

Query: 69  NHVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEN 128
            HVLEFLRYLDQFGKTKVH H C FFG P+PPAPC CPLRQAWGSLDALIGRLRAA+EEN
Sbjct: 85  AHVLEFLRYLDQFGKTKVHTHLCPFFGHPNPPAPCACPLRQAWGSLDALIGRLRAAFEEN 144

Query: 129 GGSPDTNPFGNGSIRVYLREVKECQAKARGIPYKKKKRKR 169
           GGSP+TNPFG  ++R+YLREV++ QAKARGI Y+KKKRKR
Sbjct: 145 GGSPETNPFGARAVRLYLREVRDSQAKARGISYEKKKRKR 178

[Close]

BLAST of Sed0020927 vs. ExPASy Swiss-Prot
Match: Q9SN52 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 9 OS=Arabidopsis thaliana OX=3702 GN=LSH9 PE=1 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 6.9e-61
Identity = 110/142 (77.46%), Postives = 123/142 (86.62%), Query Frame = 0


Query: 30  PQTVTALSRYESQKRRDWNTFGQYLKNQTPPVSLSECNCNHVLEFLRYLDQFGKTKVHLH 89
           PQ    LSRYESQKRRDWNTF QYLK+Q PP+ +S+ +  HVL FLRYLDQFGKTKVH  
Sbjct: 29  PQPQQPLSRYESQKRRDWNTFVQYLKSQNPPLMMSQFDYTHVLSFLRYLDQFGKTKVHHQ 88

Query: 90  GCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEN-GGSPDTNPFGNGSIRVYLRE 149
            CVFFGQPDPP PCTCPL+QAWGSLDALIGRLRAAYEE+ GGSPDTNPF NGSIRV+LRE
Sbjct: 89  ACVFFGQPDPPGPCTCPLKQAWGSLDALIGRLRAAYEEHGGGSPDTNPFANGSIRVHLRE 148

Query: 150 VKECQAKARGIPYKKKKRKRAQ 171
           V+E QAKARGIPY+KKKR++ +
Sbjct: 149 VRESQAKARGIPYRKKKRRKTK 170

[Close]

BLAST of Sed0020927 vs. ExPASy Swiss-Prot
Match: A2XED8 (Protein G1-like7 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_10694 PE=3 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 5.9e-60
Identity = 109/160 (68.12%), Postives = 128/160 (80.00%), Query Frame = 0


Query: 11  SGAGSSSSRTTAAGLGNQQPQTVTALSRYESQKRRDWNTFGQYLKNQTPPVSLSECNCNH 70
           SG G SS+    A      PQ    LSRYESQKRRDWNTF QYL+N  PP++L+ C+  H
Sbjct: 4   SGPGPSSAAAGGAPAVAAAPQPPAQLSRYESQKRRDWNTFLQYLRNHRPPLTLARCSGAH 63

Query: 71  VLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEENGG 130
           V+EFLRYLDQFGKTKVH  GC F+GQP PP PC CPLRQAWGSLDALIGRLRAAYEE+GG
Sbjct: 64  VIEFLRYLDQFGKTKVHASGCAFYGQPSPPGPCPCPLRQAWGSLDALIGRLRAAYEESGG 123

Query: 131 SPDTNPFGNGSIRVYLREVKECQAKARGIPYKKKKRKRAQ 171
           +P++NPF   ++R+YLREV++ QAKARGIPY+KKKRKR+Q
Sbjct: 124 TPESNPFAARAVRIYLREVRDSQAKARGIPYEKKKRKRSQ 163

[Close]

BLAST of Sed0020927 vs. ExPASy Swiss-Prot
Match: Q941W1 (Protein G1-like7 OS=Oryza sativa subsp. japonica OX=39947 GN=G1L7 PE=1 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 5.9e-60
Identity = 109/160 (68.12%), Postives = 128/160 (80.00%), Query Frame = 0


Query: 11  SGAGSSSSRTTAAGLGNQQPQTVTALSRYESQKRRDWNTFGQYLKNQTPPVSLSECNCNH 70
           SG G SS+    A      PQ    LSRYESQKRRDWNTF QYL+N  PP++L+ C+  H
Sbjct: 4   SGPGPSSAAAGGAPAVAAAPQPPAQLSRYESQKRRDWNTFLQYLRNHRPPLTLARCSGAH 63

Query: 71  VLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEENGG 130
           V+EFLRYLDQFGKTKVH  GC F+GQP PP PC CPLRQAWGSLDALIGRLRAAYEE+GG
Sbjct: 64  VIEFLRYLDQFGKTKVHASGCAFYGQPSPPGPCPCPLRQAWGSLDALIGRLRAAYEESGG 123

Query: 131 SPDTNPFGNGSIRVYLREVKECQAKARGIPYKKKKRKRAQ 171
           +P++NPF   ++R+YLREV++ QAKARGIPY+KKKRKR+Q
Sbjct: 124 TPESNPFAARAVRIYLREVRDSQAKARGIPYEKKKRKRSQ 163

[Close]

BLAST of Sed0020927 vs. ExPASy TrEMBL
Match: A0A6J1EJZ8 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like OS=Cucurbita moschata OX=3662 GN=LOC111434007 PE=3 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 1.3e-81
Identity = 153/181 (84.53%), Postives = 163/181 (90.06%), Query Frame = 0


Query: 1   MSTEGRKDSTSGAGSSSSRTTA---AGLGNQQPQTVTALSRYESQKRRDWNTFGQYLKNQ 60
           MSTEGRKDST   G SSSRT A   A    QQ QT  ALSRYESQK+RDWNTFGQYLKNQ
Sbjct: 2   MSTEGRKDSTE--GGSSSRTAAGSSAAADQQQQQTSAALSRYESQKKRDWNTFGQYLKNQ 61

Query: 61  TPPVSLSECNCNHVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDAL 120
           TPPV+LS+CNCNHV+EF+RYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDAL
Sbjct: 62  TPPVALSQCNCNHVVEFMRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDAL 121

Query: 121 IGRLRAAYEENGGSPDTNPFGNGSIRVYLREVKECQAKARGIPYKKKKRKRAQLKPNHDH 179
           IGRLRAAYEE+GGSP+TNPFGNG+IRVYLREVKECQAKARGIPYKKKKRKR+QLK N + 
Sbjct: 122 IGRLRAAYEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKKRKRSQLKGNEED 180

[Close]

BLAST of Sed0020927 vs. ExPASy TrEMBL
Match: A0A6J1CET4 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like OS=Momordica charantia OX=3673 GN=LOC111010841 PE=3 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 2.8e-81
Identity = 155/185 (83.78%), Postives = 162/185 (87.57%), Query Frame = 0


Query: 1   MSTEGRKDSTSGAGSSSSRTTAAGLGNQQPQTVTALSRYESQKRRDWNTFGQYLKNQTPP 60
           MSTE RKDST  AGSSSS    A   +      TALSRYESQKRRDWNTFGQYLKNQTPP
Sbjct: 1   MSTEARKDSTEAAGSSSSMRPGAAADH----PTTALSRYESQKRRDWNTFGQYLKNQTPP 60

Query: 61  VSLSECNCNHVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGR 120
           V+LS+CNCNHVLEFLRYLDQFGKTKVHL GCVFFGQPDPPAPCTCPLRQAWGSLDALIGR
Sbjct: 61  VALSQCNCNHVLEFLRYLDQFGKTKVHLPGCVFFGQPDPPAPCTCPLRQAWGSLDALIGR 120

Query: 121 LRAAYEENGGSPDTNPFGNGSIRVYLREVKECQAKARGIPYKKKKRKRAQLKPNH----D 180
           LRAAYEE+GGSP+TNPFGNG+IRVYLREVKECQAKARGIPYKKKKRKRAQLKPN+    D
Sbjct: 121 LRAAYEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKKRKRAQLKPNNDDHQD 180

Query: 181 HNVHL 182
           H  HL
Sbjct: 181 HKNHL 181

[Close]

BLAST of Sed0020927 vs. ExPASy TrEMBL
Match: A0A6J1KGX1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like OS=Cucurbita maxima OX=3661 GN=LOC111495158 PE=3 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 4.1e-80
Identity = 148/178 (83.15%), Postives = 159/178 (89.33%), Query Frame = 0


Query: 1   MSTEGRKDSTSGAGSSSSRTTAAGLGNQQPQTVTALSRYESQKRRDWNTFGQYLKNQTPP 60
           MSTEGRKDST  AGSSS     +     Q Q   ALSRYESQK+RDWNTFGQYLKNQTPP
Sbjct: 1   MSTEGRKDSTE-AGSSSRTAAGSSAAADQQQASAALSRYESQKKRDWNTFGQYLKNQTPP 60

Query: 61  VSLSECNCNHVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGR 120
           V+LS+CNCNHV+EF+RYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGR
Sbjct: 61  VALSQCNCNHVVEFMRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGR 120

Query: 121 LRAAYEENGGSPDTNPFGNGSIRVYLREVKECQAKARGIPYKKKKRKRAQLKPNHDHN 179
           LRAAYEE+GGSP+TNPFGNG+IRVYLREVKECQAKARGIPYKKKKRKR+QLK N + N
Sbjct: 121 LRAAYEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKKRKRSQLKGNDEDN 177

[Close]

BLAST of Sed0020927 vs. ExPASy TrEMBL
Match: A0A1S4E614 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like OS=Cucumis melo OX=3656 GN=LOC103503180 PE=3 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 2.6e-79
Identity = 151/176 (85.80%), Postives = 155/176 (88.07%), Query Frame = 0


Query: 1   MSTEGRKDSTSGAGSSSSRTTAAGLGNQQPQTVTALSRYESQKRRDWNTFGQYLKNQTPP 60
           MSTE RKD T  AGSSS  TT          T  ALSRYESQKRRDWNTFGQYLKNQTPP
Sbjct: 1   MSTEARKDPTE-AGSSSRTTTT---------TTAALSRYESQKRRDWNTFGQYLKNQTPP 60

Query: 61  VSLSECNCNHVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGR 120
           VSLS+CNCNHVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGR
Sbjct: 61  VSLSQCNCNHVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGR 120

Query: 121 LRAAYEENGGSPDTNPFGNGSIRVYLREVKECQAKARGIPYKKKKRKRAQLKPNHD 177
           LRAAYEE+GGSP+TNPFGNG+IRVYLREVKECQAKARGIPYKKKKRKR QLK N D
Sbjct: 121 LRAAYEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKKRKRTQLKSNDD 166

[Close]

BLAST of Sed0020927 vs. ExPASy TrEMBL
Match: A0A5A7UU18 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold96G002260 PE=3 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 2.6e-79
Identity = 151/176 (85.80%), Postives = 155/176 (88.07%), Query Frame = 0


Query: 1   MSTEGRKDSTSGAGSSSSRTTAAGLGNQQPQTVTALSRYESQKRRDWNTFGQYLKNQTPP 60
           MSTE RKD T  AGSSS  TT          T  ALSRYESQKRRDWNTFGQYLKNQTPP
Sbjct: 1   MSTEARKDPTE-AGSSSRTTTT---------TTAALSRYESQKRRDWNTFGQYLKNQTPP 60

Query: 61  VSLSECNCNHVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGR 120
           VSLS+CNCNHVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGR
Sbjct: 61  VSLSQCNCNHVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGR 120

Query: 121 LRAAYEENGGSPDTNPFGNGSIRVYLREVKECQAKARGIPYKKKKRKRAQLKPNHD 177
           LRAAYEE+GGSP+TNPFGNG+IRVYLREVKECQAKARGIPYKKKKRKR QLK N D
Sbjct: 121 LRAAYEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKKRKRTQLKSNDD 166

[Close]

BLAST of Sed0020927 vs. TAIR 10
Match: AT2G42610.1 (Protein of unknown function (DUF640) )

HSP 1 Score: 256.1 bits (653), Expect = 2.1e-68
Identity = 116/143 (81.12%), Postives = 131/143 (91.61%), Query Frame = 0


Query: 26  GNQQPQTVTALSRYESQKRRDWNTFGQYLKNQTPPVSLSECNCNHVLEFLRYLDQFGKTK 85
           G++ P T    SRYESQKRRDWNTFGQYLKNQ PPV +S C+CNHVL+FLRYLDQFGKTK
Sbjct: 16  GSEPPVTP---SRYESQKRRDWNTFGQYLKNQRPPVPMSHCSCNHVLDFLRYLDQFGKTK 75

Query: 86  VHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEENGGSPDTNPFGNGSIRVY 145
           VH+ GC+F+GQP+PPAPCTCPLRQAWGSLDALIGRLRAAYEENGG P+TNPF +G+IRVY
Sbjct: 76  VHVPGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEENGGPPETNPFASGAIRVY 135

Query: 146 LREVKECQAKARGIPYKKKKRKR 169
           LREV+ECQAKARGIPYKKKK+K+
Sbjct: 136 LREVRECQAKARGIPYKKKKKKK 155

[Close]

BLAST of Sed0020927 vs. TAIR 10
Match: AT2G42610.2 (Protein of unknown function (DUF640) )

HSP 1 Score: 256.1 bits (653), Expect = 2.1e-68
Identity = 116/143 (81.12%), Postives = 131/143 (91.61%), Query Frame = 0


Query: 26  GNQQPQTVTALSRYESQKRRDWNTFGQYLKNQTPPVSLSECNCNHVLEFLRYLDQFGKTK 85
           G++ P T    SRYESQKRRDWNTFGQYLKNQ PPV +S C+CNHVL+FLRYLDQFGKTK
Sbjct: 16  GSEPPVTP---SRYESQKRRDWNTFGQYLKNQRPPVPMSHCSCNHVLDFLRYLDQFGKTK 75

Query: 86  VHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEENGGSPDTNPFGNGSIRVY 145
           VH+ GC+F+GQP+PPAPCTCPLRQAWGSLDALIGRLRAAYEENGG P+TNPF +G+IRVY
Sbjct: 76  VHVPGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEENGGPPETNPFASGAIRVY 135

Query: 146 LREVKECQAKARGIPYKKKKRKR 169
           LREV+ECQAKARGIPYKKKK+K+
Sbjct: 136 LREVRECQAKARGIPYKKKKKKK 155

[Close]

BLAST of Sed0020927 vs. TAIR 10
Match: AT3G23290.2 (Protein of unknown function (DUF640) )

HSP 1 Score: 235.3 bits (599), Expect = 3.8e-62
Identity = 114/160 (71.25%), Postives = 132/160 (82.50%), Query Frame = 0


Query: 9   STSGAGSSSSRTTAAGLGNQQPQTVTALSRYESQKRRDWNTFGQYLKNQTPPVSLSECNC 68
           +T+   SSSS +++ G G  Q      LSRYE+QKRRDWNTFGQYL+N  PP+SLS C+ 
Sbjct: 25  ATTTTTSSSSSSSSGGSGTNQ------LSRYENQKRRDWNTFGQYLRNHRPPLSLSRCSG 84

Query: 69  NHVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEN 128
            HVLEFLRYLDQFGKTKVH H C FFG P+PPAPC CPLRQAWGSLDALIGRLRAA+EEN
Sbjct: 85  AHVLEFLRYLDQFGKTKVHTHLCPFFGHPNPPAPCACPLRQAWGSLDALIGRLRAAFEEN 144

Query: 129 GGSPDTNPFGNGSIRVYLREVKECQAKARGIPYKKKKRKR 169
           GGSP+TNPFG  ++R+YLREV++ QAKARGI Y+KKKRKR
Sbjct: 145 GGSPETNPFGARAVRLYLREVRDSQAKARGISYEKKKRKR 178

[Close]

BLAST of Sed0020927 vs. TAIR 10
Match: AT4G18610.1 (Protein of unknown function (DUF640) )

HSP 1 Score: 235.0 bits (598), Expect = 4.9e-62
Identity = 110/142 (77.46%), Postives = 123/142 (86.62%), Query Frame = 0


Query: 30  PQTVTALSRYESQKRRDWNTFGQYLKNQTPPVSLSECNCNHVLEFLRYLDQFGKTKVHLH 89
           PQ    LSRYESQKRRDWNTF QYLK+Q PP+ +S+ +  HVL FLRYLDQFGKTKVH  
Sbjct: 29  PQPQQPLSRYESQKRRDWNTFVQYLKSQNPPLMMSQFDYTHVLSFLRYLDQFGKTKVHHQ 88

Query: 90  GCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEN-GGSPDTNPFGNGSIRVYLRE 149
            CVFFGQPDPP PCTCPL+QAWGSLDALIGRLRAAYEE+ GGSPDTNPF NGSIRV+LRE
Sbjct: 89  ACVFFGQPDPPGPCTCPLKQAWGSLDALIGRLRAAYEEHGGGSPDTNPFANGSIRVHLRE 148

Query: 150 VKECQAKARGIPYKKKKRKRAQ 171
           V+E QAKARGIPY+KKKR++ +
Sbjct: 149 VRESQAKARGIPYRKKKRRKTK 170

[Close]

BLAST of Sed0020927 vs. TAIR 10
Match: AT1G78815.1 (Protein of unknown function (DUF640) )

HSP 1 Score: 231.9 bits (590), Expect = 4.2e-61
Identity = 106/150 (70.67%), Postives = 123/150 (82.00%), Query Frame = 0


Query: 28  QQPQTVTALSRYESQKRRDWNTFGQYLKNQTPPVSLSECNCNHVLEFLRYLDQFGKTKVH 87
           Q P    ALSRYESQKRRDWNTF QYL+NQ PPV +S+C  NH+L+FL+YLDQFGKTKVH
Sbjct: 30  QSPPNPPALSRYESQKRRDWNTFCQYLRNQQPPVHISQCGSNHILDFLQYLDQFGKTKVH 89

Query: 88  LHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEENGGSPDTNPFGNGSIRVYLR 147
           +HGCVFFGQ +P   C CPL+QAWGSLDALIGRLRAA+EENGG P+ NPF  G IRV+LR
Sbjct: 90  IHGCVFFGQVEPAGQCNCPLKQAWGSLDALIGRLRAAFEENGGLPERNPFAGGGIRVFLR 149

Query: 148 EVKECQAKARGIPYKK-KKRKRAQLKPNHD 177
           EV++ QAKARG+PYKK KKRK+     +HD
Sbjct: 150 EVRDSQAKARGVPYKKRKKRKKRNPMKSHD 179

The following BLAST results are available for this feature:

BLAST of Sed0020927 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038896042.1	8.9e-82	87.64	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Benincasa hispida] >XP_0388960...	[more]
XP_022927073.1	2.6e-81	84.53	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Cucurbita moschata]	[more]
XP_022140104.1	5.8e-81	83.78	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Momordica charantia] >XP_02214...	[more]
KAG6583960.1	2.2e-80	82.16	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10, partial [Cucurbita argyrosperma sub...	[more]
KAG7019578.1	2.9e-80	81.72	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10, partial [Cucurbita argyrosperma sub...	[more]

BLAST of Sed0020927 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9S7R3	2.9e-67	81.12	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 OS=Arabidopsis thaliana OX=3702 GN=L...	[more]
Q9LW68	5.3e-61	71.25	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4 OS=Arabidopsis thaliana OX=3702 GN=LS...	[more]
Q9SN52	6.9e-61	77.46	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 9 OS=Arabidopsis thaliana OX=3702 GN=LS...	[more]
A2XED8	5.9e-60	68.13	Protein G1-like7 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_10694 PE=3 SV=1	[more]
Q941W1	5.9e-60	68.13	Protein G1-like7 OS=Oryza sativa subsp. japonica OX=39947 GN=G1L7 PE=1 SV=1	[more]

BLAST of Sed0020927 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EJZ8	1.3e-81	84.53	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like OS=Cucurbita moschata OX=3662 G...	[more]
A0A6J1CET4	2.8e-81	83.78	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like OS=Momordica charantia OX=3673 ...	[more]
A0A6J1KGX1	4.1e-80	83.15	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A1S4E614	2.6e-79	85.80	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A5A7UU18	2.6e-79	85.80	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like OS=Cucumis melo var. makuwa OX=...	[more]

BLAST of Sed0020927 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G42610.1	2.1e-68	81.12	Protein of unknown function (DUF640)	[more]
AT2G42610.2	2.1e-68	81.12	Protein of unknown function (DUF640)	[more]
AT3G23290.2	3.8e-62	71.25	Protein of unknown function (DUF640)	[more]
AT4G18610.1	4.9e-62	77.46	Protein of unknown function (DUF640)	[more]
AT1G78815.1	4.2e-61	70.67	Protein of unknown function (DUF640)	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006936	ALOG domain	PFAM	PF04852	DUF640	coord: 30..151 e-value: 7.4E-64 score: 213.6
IPR006936	ALOG domain	PROSITE	PS51697	ALOG	coord: 38..165 score: 77.533463
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 161..182
None	No IPR available	PANTHER	PTHR31165:SF9	PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 6	coord: 2..178
IPR040222	ALOG family	PANTHER	PTHR31165	PROTEIN G1-LIKE2	coord: 2..178

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0020927.1	Sed0020927.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009299	mRNA transcription
biological_process	GO:0009416	response to light stimulus
cellular_component	GO:0005634	nucleus