Homology
BLAST of Sed0020923 vs. NCBI nr
Match:
XP_038899669.1 (DNA mismatch repair protein MSH6 isoform X1 [Benincasa hispida])
HSP 1 Score: 1742.6 bits (4512), Expect = 0.0e+00
Identity = 881/950 (92.74%), Postives = 917/950 (96.53%), Query Frame = 0
Query: 1 MDKVLFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPEKNFSLNVEKLARKGYRV 60
MDKVLFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPE+NFSLNVEKLARKGYRV
Sbjct: 354 MDKVLFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSLNVEKLARKGYRV 413
Query: 61 LVIEQTETPEQLERRRKEKGSKDKVVKREICAVVTKGTLTEGEMLSLNPDASYLMSVTEK 120
LVIEQTETPEQLERRRKEKGSKDKVVKREICAVVTKGTLTEGEMLSLNPDASYLM+VTE
Sbjct: 414 LVIEQTETPEQLERRRKEKGSKDKVVKREICAVVTKGTLTEGEMLSLNPDASYLMAVTEN 473
Query: 121 FHGLENQQTERILGVCLVDAATSRIILGQFGDDLECSALCSLLSELRPVEIVKPAKLLSP 180
HGLENQQ ERILGVC+VDAATSRIILGQFGDD ECSALC LLSELRPVEI+KPAKLLSP
Sbjct: 474 SHGLENQQAERILGVCVVDAATSRIILGQFGDDSECSALCCLLSELRPVEIIKPAKLLSP 533
Query: 181 ETERVLLTHTRNSLVNELVPLLEFWDAEKSVQEVKRLFKGIANRSVSGSSSEASLPNDVA 240
ETERVLLTHTRN LVNELVPLLEFWDAE+SVQEV+RLFKGIANRSVSGSSSEASL ND A
Sbjct: 534 ETERVLLTHTRNPLVNELVPLLEFWDAERSVQEVERLFKGIANRSVSGSSSEASLLNDDA 593
Query: 241 PEEKDGLNYLPDVLSELVNARENGSWALSALGGILFYLKQAFLDETLLRFAKFELLPCSG 300
P EKDGL+YLPDVLSELVNA ENGSWALSALGGILFYLKQAFLDETLL+FAKFELLPCSG
Sbjct: 594 PGEKDGLSYLPDVLSELVNAHENGSWALSALGGILFYLKQAFLDETLLKFAKFELLPCSG 653
Query: 301 FSDVISKPYMVLDAAALENLEIFENSKNGDSSGTLYSQLNHCVTAFGKRLLKTWLARPLY 360
FSDVISKPYMVLDAAALENLEIFENS+NGDSSGTLYSQLNHCVTAFGKRLLKTWLARPLY
Sbjct: 654 FSDVISKPYMVLDAAALENLEIFENSRNGDSSGTLYSQLNHCVTAFGKRLLKTWLARPLY 713
Query: 361 HVESIKARQGAVASLRGDNLSCSLEFRKALSKLPDMERLLARIFASSEANGRNAKNVVLY 420
HVESIKARQGAVASLRGDNLS SLEFRKAL+KLPDMERLLARIFA+SEANGRNAKNVVLY
Sbjct: 714 HVESIKARQGAVASLRGDNLSFSLEFRKALAKLPDMERLLARIFANSEANGRNAKNVVLY 773
Query: 421 EDAAKKQLQEFISALRGCELMLQACSSLRVILKNVESKRLDCLLTPGEGLPDLYSVLSHF 480
EDAAKKQLQEFISALRGCELMLQACSSLRVIL NVES+R DCLLTPGEGLPDL SVLSHF
Sbjct: 774 EDAAKKQLQEFISALRGCELMLQACSSLRVILSNVESRRFDCLLTPGEGLPDLLSVLSHF 833
Query: 481 KDAFDWVEANSSGRIMPHEGVDVEHDSACEKIKEIQSSLAKHLKEQRKLLGDTSITYVTV 540
KDAFDWVEANSSGRI+P EGVD+E+DSACEKIKEIQ+SL KHLKEQR+LLGDTSITYVTV
Sbjct: 834 KDAFDWVEANSSGRIIPREGVDMEYDSACEKIKEIQASLTKHLKEQRRLLGDTSITYVTV 893
Query: 541 GKETHLLEVPESLQGNIPRSYELRSSKKGFFRYWTPTIKSLLAELSLAESEKESSLKSIL 600
GKETHLLEVPESLQGN+P++YELRSSKKGFFRYWTP IK LLAELSLAESEKESSLKSIL
Sbjct: 894 GKETHLLEVPESLQGNVPQTYELRSSKKGFFRYWTPNIKKLLAELSLAESEKESSLKSIL 953
Query: 601 QRLIGKFCEYHLQWRQLVSAIAELDVLISLAIASDYYEGHACQPLFSKLQCQKKVPCFSA 660
QRLIGKFCE+HLQWRQLVSAIAELDVLISLAIASDYYEGH CQPLFSK QCQ +VP F+A
Sbjct: 954 QRLIGKFCEHHLQWRQLVSAIAELDVLISLAIASDYYEGHTCQPLFSKSQCQNEVPRFNA 1013
Query: 661 KNLGHPTLRSDSLGEGTFVPNDVNIGGSGANFILLTGPNMGGKSTLLRQVCLSVILAQMG 720
KNLGHP LRSDSLGEGTFVPND+ +GG GANFILLTGPNMGGKSTLLRQVCLSVILAQ+G
Sbjct: 1014 KNLGHPILRSDSLGEGTFVPNDITLGGLGANFILLTGPNMGGKSTLLRQVCLSVILAQIG 1073
Query: 721 ADVPAESFELAPVDRIFVRMGAKDQIMSGQSTFLTELSETALMLSSATRNSLVILDELGR 780
ADVPAESFELAPVDRIFVRMGAKDQIMSGQSTFLTELSETALMLSSATRNSLVILDELGR
Sbjct: 1074 ADVPAESFELAPVDRIFVRMGAKDQIMSGQSTFLTELSETALMLSSATRNSLVILDELGR 1133
Query: 781 GTATSDGQAIAESVLEHFVSKVQCRGIFSTHYHRLALTYHKDPRVSLCHMACRVGEGTGG 840
GTATSDGQAIAESVLEHFVSKVQCRG+FSTHYHRLAL Y+KDPRVSL HMACRVGEG G
Sbjct: 1134 GTATSDGQAIAESVLEHFVSKVQCRGVFSTHYHRLALAYYKDPRVSLYHMACRVGEGNNG 1193
Query: 841 LEEVTFLYRLTPGSCPKSYGVNVARLAGIPNCVLTEAAAKSREFEATYGMTGEESEDNLC 900
LEEVTFLYRLTPG+CPKSYGVNVARLAG+PNCVLTEAAAKS EFEATYGM EESEDNLC
Sbjct: 1194 LEEVTFLYRLTPGTCPKSYGVNVARLAGLPNCVLTEAAAKSMEFEATYGMVREESEDNLC 1253
Query: 901 NHAWVDNTVTLIQKLISLESTVKCNDETKKNSIGSLKQLQQQARILVQQG 951
NHAWVD+TVTLIQKLISLEST++CNDET+KN IGSL+QLQQ+ARILVQQG
Sbjct: 1254 NHAWVDDTVTLIQKLISLESTMRCNDETEKNGIGSLEQLQQEARILVQQG 1303
BLAST of Sed0020923 vs. NCBI nr
Match:
XP_038899670.1 (DNA mismatch repair protein MSH6 isoform X2 [Benincasa hispida])
HSP 1 Score: 1742.6 bits (4512), Expect = 0.0e+00
Identity = 881/950 (92.74%), Postives = 917/950 (96.53%), Query Frame = 0
Query: 1 MDKVLFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPEKNFSLNVEKLARKGYRV 60
MDKVLFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPE+NFSLNVEKLARKGYRV
Sbjct: 353 MDKVLFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSLNVEKLARKGYRV 412
Query: 61 LVIEQTETPEQLERRRKEKGSKDKVVKREICAVVTKGTLTEGEMLSLNPDASYLMSVTEK 120
LVIEQTETPEQLERRRKEKGSKDKVVKREICAVVTKGTLTEGEMLSLNPDASYLM+VTE
Sbjct: 413 LVIEQTETPEQLERRRKEKGSKDKVVKREICAVVTKGTLTEGEMLSLNPDASYLMAVTEN 472
Query: 121 FHGLENQQTERILGVCLVDAATSRIILGQFGDDLECSALCSLLSELRPVEIVKPAKLLSP 180
HGLENQQ ERILGVC+VDAATSRIILGQFGDD ECSALC LLSELRPVEI+KPAKLLSP
Sbjct: 473 SHGLENQQAERILGVCVVDAATSRIILGQFGDDSECSALCCLLSELRPVEIIKPAKLLSP 532
Query: 181 ETERVLLTHTRNSLVNELVPLLEFWDAEKSVQEVKRLFKGIANRSVSGSSSEASLPNDVA 240
ETERVLLTHTRN LVNELVPLLEFWDAE+SVQEV+RLFKGIANRSVSGSSSEASL ND A
Sbjct: 533 ETERVLLTHTRNPLVNELVPLLEFWDAERSVQEVERLFKGIANRSVSGSSSEASLLNDDA 592
Query: 241 PEEKDGLNYLPDVLSELVNARENGSWALSALGGILFYLKQAFLDETLLRFAKFELLPCSG 300
P EKDGL+YLPDVLSELVNA ENGSWALSALGGILFYLKQAFLDETLL+FAKFELLPCSG
Sbjct: 593 PGEKDGLSYLPDVLSELVNAHENGSWALSALGGILFYLKQAFLDETLLKFAKFELLPCSG 652
Query: 301 FSDVISKPYMVLDAAALENLEIFENSKNGDSSGTLYSQLNHCVTAFGKRLLKTWLARPLY 360
FSDVISKPYMVLDAAALENLEIFENS+NGDSSGTLYSQLNHCVTAFGKRLLKTWLARPLY
Sbjct: 653 FSDVISKPYMVLDAAALENLEIFENSRNGDSSGTLYSQLNHCVTAFGKRLLKTWLARPLY 712
Query: 361 HVESIKARQGAVASLRGDNLSCSLEFRKALSKLPDMERLLARIFASSEANGRNAKNVVLY 420
HVESIKARQGAVASLRGDNLS SLEFRKAL+KLPDMERLLARIFA+SEANGRNAKNVVLY
Sbjct: 713 HVESIKARQGAVASLRGDNLSFSLEFRKALAKLPDMERLLARIFANSEANGRNAKNVVLY 772
Query: 421 EDAAKKQLQEFISALRGCELMLQACSSLRVILKNVESKRLDCLLTPGEGLPDLYSVLSHF 480
EDAAKKQLQEFISALRGCELMLQACSSLRVIL NVES+R DCLLTPGEGLPDL SVLSHF
Sbjct: 773 EDAAKKQLQEFISALRGCELMLQACSSLRVILSNVESRRFDCLLTPGEGLPDLLSVLSHF 832
Query: 481 KDAFDWVEANSSGRIMPHEGVDVEHDSACEKIKEIQSSLAKHLKEQRKLLGDTSITYVTV 540
KDAFDWVEANSSGRI+P EGVD+E+DSACEKIKEIQ+SL KHLKEQR+LLGDTSITYVTV
Sbjct: 833 KDAFDWVEANSSGRIIPREGVDMEYDSACEKIKEIQASLTKHLKEQRRLLGDTSITYVTV 892
Query: 541 GKETHLLEVPESLQGNIPRSYELRSSKKGFFRYWTPTIKSLLAELSLAESEKESSLKSIL 600
GKETHLLEVPESLQGN+P++YELRSSKKGFFRYWTP IK LLAELSLAESEKESSLKSIL
Sbjct: 893 GKETHLLEVPESLQGNVPQTYELRSSKKGFFRYWTPNIKKLLAELSLAESEKESSLKSIL 952
Query: 601 QRLIGKFCEYHLQWRQLVSAIAELDVLISLAIASDYYEGHACQPLFSKLQCQKKVPCFSA 660
QRLIGKFCE+HLQWRQLVSAIAELDVLISLAIASDYYEGH CQPLFSK QCQ +VP F+A
Sbjct: 953 QRLIGKFCEHHLQWRQLVSAIAELDVLISLAIASDYYEGHTCQPLFSKSQCQNEVPRFNA 1012
Query: 661 KNLGHPTLRSDSLGEGTFVPNDVNIGGSGANFILLTGPNMGGKSTLLRQVCLSVILAQMG 720
KNLGHP LRSDSLGEGTFVPND+ +GG GANFILLTGPNMGGKSTLLRQVCLSVILAQ+G
Sbjct: 1013 KNLGHPILRSDSLGEGTFVPNDITLGGLGANFILLTGPNMGGKSTLLRQVCLSVILAQIG 1072
Query: 721 ADVPAESFELAPVDRIFVRMGAKDQIMSGQSTFLTELSETALMLSSATRNSLVILDELGR 780
ADVPAESFELAPVDRIFVRMGAKDQIMSGQSTFLTELSETALMLSSATRNSLVILDELGR
Sbjct: 1073 ADVPAESFELAPVDRIFVRMGAKDQIMSGQSTFLTELSETALMLSSATRNSLVILDELGR 1132
Query: 781 GTATSDGQAIAESVLEHFVSKVQCRGIFSTHYHRLALTYHKDPRVSLCHMACRVGEGTGG 840
GTATSDGQAIAESVLEHFVSKVQCRG+FSTHYHRLAL Y+KDPRVSL HMACRVGEG G
Sbjct: 1133 GTATSDGQAIAESVLEHFVSKVQCRGVFSTHYHRLALAYYKDPRVSLYHMACRVGEGNNG 1192
Query: 841 LEEVTFLYRLTPGSCPKSYGVNVARLAGIPNCVLTEAAAKSREFEATYGMTGEESEDNLC 900
LEEVTFLYRLTPG+CPKSYGVNVARLAG+PNCVLTEAAAKS EFEATYGM EESEDNLC
Sbjct: 1193 LEEVTFLYRLTPGTCPKSYGVNVARLAGLPNCVLTEAAAKSMEFEATYGMVREESEDNLC 1252
Query: 901 NHAWVDNTVTLIQKLISLESTVKCNDETKKNSIGSLKQLQQQARILVQQG 951
NHAWVD+TVTLIQKLISLEST++CNDET+KN IGSL+QLQQ+ARILVQQG
Sbjct: 1253 NHAWVDDTVTLIQKLISLESTMRCNDETEKNGIGSLEQLQQEARILVQQG 1302
BLAST of Sed0020923 vs. NCBI nr
Match:
XP_008451484.1 (PREDICTED: DNA mismatch repair protein MSH6 [Cucumis melo])
HSP 1 Score: 1739.9 bits (4505), Expect = 0.0e+00
Identity = 879/950 (92.53%), Postives = 917/950 (96.53%), Query Frame = 0
Query: 1 MDKVLFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPEKNFSLNVEKLARKGYRV 60
MDKVLFFKMGKFYELFEMDAH+GAKELDLQYMKGEQPHCGFPE+NFSLNVEKLARKGYRV
Sbjct: 362 MDKVLFFKMGKFYELFEMDAHIGAKELDLQYMKGEQPHCGFPERNFSLNVEKLARKGYRV 421
Query: 61 LVIEQTETPEQLERRRKEKGSKDKVVKREICAVVTKGTLTEGEMLSLNPDASYLMSVTEK 120
LVIEQTETPEQLERRRKEKGSKDKVVKREICAVVTKGTLTEGEMLSLNPDASYLM+VTEK
Sbjct: 422 LVIEQTETPEQLERRRKEKGSKDKVVKREICAVVTKGTLTEGEMLSLNPDASYLMAVTEK 481
Query: 121 FHGLENQQTERILGVCLVDAATSRIILGQFGDDLECSALCSLLSELRPVEIVKPAKLLSP 180
FHGLENQQ ERILGVC+VD ATSR+ILGQFGDDLECSALC LLSELRPVEI+KPAKLLSP
Sbjct: 482 FHGLENQQAERILGVCVVDVATSRVILGQFGDDLECSALCCLLSELRPVEIIKPAKLLSP 541
Query: 181 ETERVLLTHTRNSLVNELVPLLEFWDAEKSVQEVKRLFKGIANRSVSGSSSEASLPNDVA 240
ETERVLLTHTRN LVNELVPLLEFW+AEK+VQEVKRLFKGIANRSVSGSSSEASL ND
Sbjct: 542 ETERVLLTHTRNPLVNELVPLLEFWNAEKTVQEVKRLFKGIANRSVSGSSSEASLLNDDT 601
Query: 241 PEEKDGLNYLPDVLSELVNARENGSWALSALGGILFYLKQAFLDETLLRFAKFELLPCSG 300
P E DGL++LP VLSELV A+ENGSWALSALGGILFYLKQAFLDETLLRFAKFELLPCSG
Sbjct: 602 PGENDGLSFLPVVLSELVTAQENGSWALSALGGILFYLKQAFLDETLLRFAKFELLPCSG 661
Query: 301 FSDVISKPYMVLDAAALENLEIFENSKNGDSSGTLYSQLNHCVTAFGKRLLKTWLARPLY 360
FSDVISKPYMVLDAAALENLEIFENS+NGDSSGTLYSQLNHCVTAFGKRLLKTWLARPLY
Sbjct: 662 FSDVISKPYMVLDAAALENLEIFENSRNGDSSGTLYSQLNHCVTAFGKRLLKTWLARPLY 721
Query: 361 HVESIKARQGAVASLRGDNLSCSLEFRKALSKLPDMERLLARIFASSEANGRNAKNVVLY 420
VESIKARQGAVASLRGDNLS SLEFRKALSKLPDMERLLARIF++SEANGRNAKNVVLY
Sbjct: 722 DVESIKARQGAVASLRGDNLSFSLEFRKALSKLPDMERLLARIFSNSEANGRNAKNVVLY 781
Query: 421 EDAAKKQLQEFISALRGCELMLQACSSLRVILKNVESKRLDCLLTPGEGLPDLYSVLSHF 480
EDAAKKQLQEFISALRGCELMLQACSSL VIL +VES+RL+CLLTPGEGLPDL+SVLSHF
Sbjct: 782 EDAAKKQLQEFISALRGCELMLQACSSLHVILPSVESRRLNCLLTPGEGLPDLHSVLSHF 841
Query: 481 KDAFDWVEANSSGRIMPHEGVDVEHDSACEKIKEIQSSLAKHLKEQRKLLGDTSITYVTV 540
KDAFDWVEANSSGR++P EGVDVE+DSACEKIKEIQSSL KHLKEQRKLLGDTSITYVTV
Sbjct: 842 KDAFDWVEANSSGRVIPREGVDVEYDSACEKIKEIQSSLTKHLKEQRKLLGDTSITYVTV 901
Query: 541 GKETHLLEVPESLQGNIPRSYELRSSKKGFFRYWTPTIKSLLAELSLAESEKESSLKSIL 600
GKETHLLEVPESLQGNIP++YELRSSKKGFFRYWTP IK LL ELSLAESEKESSLKSIL
Sbjct: 902 GKETHLLEVPESLQGNIPQTYELRSSKKGFFRYWTPNIKKLLVELSLAESEKESSLKSIL 961
Query: 601 QRLIGKFCEYHLQWRQLVSAIAELDVLISLAIASDYYEGHACQPLFSKLQCQKKVPCFSA 660
QRLIGKFCE+HLQWRQLVSAIAELDVLISLAIASDYYEG+ CQPLFSK QCQ +VP F+A
Sbjct: 962 QRLIGKFCEHHLQWRQLVSAIAELDVLISLAIASDYYEGYTCQPLFSKSQCQSEVPRFTA 1021
Query: 661 KNLGHPTLRSDSLGEGTFVPNDVNIGGSGANFILLTGPNMGGKSTLLRQVCLSVILAQMG 720
KNLGHP LRSDSLGEGTFVPND+ IGGSGANFILLTGPNMGGKSTLLRQVCLS+ILAQ+G
Sbjct: 1022 KNLGHPILRSDSLGEGTFVPNDITIGGSGANFILLTGPNMGGKSTLLRQVCLSIILAQIG 1081
Query: 721 ADVPAESFELAPVDRIFVRMGAKDQIMSGQSTFLTELSETALMLSSATRNSLVILDELGR 780
ADVPAESFELAPVDRIFVRMGAKDQIMSGQSTFLTELSETALMLSSATRNSLVILDELGR
Sbjct: 1082 ADVPAESFELAPVDRIFVRMGAKDQIMSGQSTFLTELSETALMLSSATRNSLVILDELGR 1141
Query: 781 GTATSDGQAIAESVLEHFVSKVQCRGIFSTHYHRLALTYHKDPRVSLCHMACRVGEGTGG 840
GTATSDGQAIAESVLEHFVSKVQCRG+FSTHYHRLAL Y+KDPRVSL HMACRVGEG G
Sbjct: 1142 GTATSDGQAIAESVLEHFVSKVQCRGVFSTHYHRLALAYYKDPRVSLYHMACRVGEGNNG 1201
Query: 841 LEEVTFLYRLTPGSCPKSYGVNVARLAGIPNCVLTEAAAKSREFEATYGMTGEESEDNLC 900
LEEVTFLYRLTPG+CPKSYGVNVARLAG+PNCVLTEAAAKS EFEATYGM GEESEDNLC
Sbjct: 1202 LEEVTFLYRLTPGTCPKSYGVNVARLAGLPNCVLTEAAAKSMEFEATYGMAGEESEDNLC 1261
Query: 901 NHAWVDNTVTLIQKLISLESTVKCNDETKKNSIGSLKQLQQQARILVQQG 951
NHAWVD+T+TLIQKLISLESTV+CNDET+KN IGSLKQLQQQARILVQQG
Sbjct: 1262 NHAWVDDTITLIQKLISLESTVRCNDETEKNGIGSLKQLQQQARILVQQG 1311
BLAST of Sed0020923 vs. NCBI nr
Match:
KAA0046691.1 (DNA mismatch repair protein MSH6 [Cucumis melo var. makuwa])
HSP 1 Score: 1734.5 bits (4491), Expect = 0.0e+00
Identity = 876/949 (92.31%), Postives = 914/949 (96.31%), Query Frame = 0
Query: 1 MDKVLFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPEKNFSLNVEKLARKGYRV 60
MDKVLFFKMGKFYELFEMDAH+GAKELDLQYMKGEQPHCGFPE+NFSLNVEKLARKGYRV
Sbjct: 362 MDKVLFFKMGKFYELFEMDAHIGAKELDLQYMKGEQPHCGFPERNFSLNVEKLARKGYRV 421
Query: 61 LVIEQTETPEQLERRRKEKGSKDKVVKREICAVVTKGTLTEGEMLSLNPDASYLMSVTEK 120
LVIEQTETPEQLERRRKEKGSKDK +KREICAVVTKGTLTEGEMLSLNPDASYLM+VTEK
Sbjct: 422 LVIEQTETPEQLERRRKEKGSKDKALKREICAVVTKGTLTEGEMLSLNPDASYLMAVTEK 481
Query: 121 FHGLENQQTERILGVCLVDAATSRIILGQFGDDLECSALCSLLSELRPVEIVKPAKLLSP 180
FHGLENQQ ERILGVC+VD ATSR+ILGQFGDDLECSALC LLSELRPVEI+KPAKLLSP
Sbjct: 482 FHGLENQQAERILGVCVVDVATSRVILGQFGDDLECSALCCLLSELRPVEIIKPAKLLSP 541
Query: 181 ETERVLLTHTRNSLVNELVPLLEFWDAEKSVQEVKRLFKGIANRSVSGSSSEASLPNDVA 240
ETERVLLTHTRN LVNELVPLLEFW+AEK+VQEVKRLFKGIANRSVSGSSSEASL ND
Sbjct: 542 ETERVLLTHTRNPLVNELVPLLEFWNAEKTVQEVKRLFKGIANRSVSGSSSEASLLNDDT 601
Query: 241 PEEKDGLNYLPDVLSELVNARENGSWALSALGGILFYLKQAFLDETLLRFAKFELLPCSG 300
P E DGL++LP VLSELV A ENGSWALSALGGILFYLKQAFLDETLLRFAKFELLPCSG
Sbjct: 602 PGENDGLSFLPVVLSELVTAHENGSWALSALGGILFYLKQAFLDETLLRFAKFELLPCSG 661
Query: 301 FSDVISKPYMVLDAAALENLEIFENSKNGDSSGTLYSQLNHCVTAFGKRLLKTWLARPLY 360
FSDVISKPYMVLDAAALENLEIFENS+NGDSSGTLYSQLNHCVTAFGKRLLKTWLARPLY
Sbjct: 662 FSDVISKPYMVLDAAALENLEIFENSRNGDSSGTLYSQLNHCVTAFGKRLLKTWLARPLY 721
Query: 361 HVESIKARQGAVASLRGDNLSCSLEFRKALSKLPDMERLLARIFASSEANGRNAKNVVLY 420
VESIKARQGAVASLRGDNLS SLEFRKALSKLPDMERLLARIF++SEANGRNAKNVVLY
Sbjct: 722 DVESIKARQGAVASLRGDNLSFSLEFRKALSKLPDMERLLARIFSNSEANGRNAKNVVLY 781
Query: 421 EDAAKKQLQEFISALRGCELMLQACSSLRVILKNVESKRLDCLLTPGEGLPDLYSVLSHF 480
EDAAKKQLQEFISALRGCELMLQACSSL VIL +VES+RL+CLLTPGEGLPDL+SVLSHF
Sbjct: 782 EDAAKKQLQEFISALRGCELMLQACSSLHVILPSVESRRLNCLLTPGEGLPDLHSVLSHF 841
Query: 481 KDAFDWVEANSSGRIMPHEGVDVEHDSACEKIKEIQSSLAKHLKEQRKLLGDTSITYVTV 540
KDAFDWVEANSSGR++P EGVDVE+DSACEKIKEIQSSL KHLKEQRKLLGDTSITYVTV
Sbjct: 842 KDAFDWVEANSSGRVIPREGVDVEYDSACEKIKEIQSSLTKHLKEQRKLLGDTSITYVTV 901
Query: 541 GKETHLLEVPESLQGNIPRSYELRSSKKGFFRYWTPTIKSLLAELSLAESEKESSLKSIL 600
GKETHLLEVPESLQGNIP++YELRSSKKGFFRYWTP IK LL ELSLAESEKESSLKSIL
Sbjct: 902 GKETHLLEVPESLQGNIPQTYELRSSKKGFFRYWTPNIKKLLVELSLAESEKESSLKSIL 961
Query: 601 QRLIGKFCEYHLQWRQLVSAIAELDVLISLAIASDYYEGHACQPLFSKLQCQKKVPCFSA 660
QRLIGKFCE+HLQWRQLVSAIAELDVLISLAIASDYYEG+ CQPLFSK QCQ +VP F+A
Sbjct: 962 QRLIGKFCEHHLQWRQLVSAIAELDVLISLAIASDYYEGYTCQPLFSKSQCQSEVPHFTA 1021
Query: 661 KNLGHPTLRSDSLGEGTFVPNDVNIGGSGANFILLTGPNMGGKSTLLRQVCLSVILAQMG 720
KNLGHP LRSDSLGEGTFVPND+ IGGSGANFILLTGPNMGGKSTLLRQVCLS+ILAQ+G
Sbjct: 1022 KNLGHPILRSDSLGEGTFVPNDITIGGSGANFILLTGPNMGGKSTLLRQVCLSIILAQIG 1081
Query: 721 ADVPAESFELAPVDRIFVRMGAKDQIMSGQSTFLTELSETALMLSSATRNSLVILDELGR 780
ADVPAESFELAPVDRIFVRMGAKDQIMSGQSTFLTELSETALMLSSATRNSLVILDELGR
Sbjct: 1082 ADVPAESFELAPVDRIFVRMGAKDQIMSGQSTFLTELSETALMLSSATRNSLVILDELGR 1141
Query: 781 GTATSDGQAIAESVLEHFVSKVQCRGIFSTHYHRLALTYHKDPRVSLCHMACRVGEGTGG 840
GTATSDGQAIAESVLEHFVSKVQCRG+FSTHYHRLAL Y+KDPRVSL HMACRVGEG G
Sbjct: 1142 GTATSDGQAIAESVLEHFVSKVQCRGVFSTHYHRLALAYYKDPRVSLYHMACRVGEGNNG 1201
Query: 841 LEEVTFLYRLTPGSCPKSYGVNVARLAGIPNCVLTEAAAKSREFEATYGMTGEESEDNLC 900
LEEVTFLYRLTPG+CPKSYGVNVARLAG+PNCVLTEAAAKS EFEATYGM GEESEDNLC
Sbjct: 1202 LEEVTFLYRLTPGTCPKSYGVNVARLAGLPNCVLTEAAAKSMEFEATYGMAGEESEDNLC 1261
Query: 901 NHAWVDNTVTLIQKLISLESTVKCNDETKKNSIGSLKQLQQQARILVQQ 950
NHAWVD+T+TLIQKLISLESTV+CNDET+KN IGSLKQLQQQARILVQQ
Sbjct: 1262 NHAWVDDTITLIQKLISLESTVRCNDETEKNGIGSLKQLQQQARILVQQ 1310
BLAST of Sed0020923 vs. NCBI nr
Match:
XP_022960522.1 (DNA mismatch repair protein MSH6 [Cucurbita moschata])
HSP 1 Score: 1728.8 bits (4476), Expect = 0.0e+00
Identity = 875/950 (92.11%), Postives = 912/950 (96.00%), Query Frame = 0
Query: 1 MDKVLFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPEKNFSLNVEKLARKGYRV 60
MDKVLFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPEKNFS+NVEKLARKGYRV
Sbjct: 359 MDKVLFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPEKNFSMNVEKLARKGYRV 418
Query: 61 LVIEQTETPEQLERRRKEKGSKDKVVKREICAVVTKGTLTEGEMLSLNPDASYLMSVTEK 120
LVIEQTETPEQLE+RRKEKGSKDKVVKREICAVVTKGTLTEGEMLSLNPDASYLM+VTEK
Sbjct: 419 LVIEQTETPEQLEKRRKEKGSKDKVVKREICAVVTKGTLTEGEMLSLNPDASYLMAVTEK 478
Query: 121 FHGLENQQTERILGVCLVDAATSRIILGQFGDDLECSALCSLLSELRPVEIVKPAKLLSP 180
FHGLENQ ERILGVC+VD ATSRIILGQFGDD ECSALC LLSELRPVEI+KP+KLLSP
Sbjct: 479 FHGLENQPAERILGVCVVDVATSRIILGQFGDDAECSALCCLLSELRPVEIIKPSKLLSP 538
Query: 181 ETERVLLTHTRNSLVNELVPLLEFWDAEKSVQEVKRLFKGIANRSVSGSSSEASLPNDVA 240
ETERVLLTHTRN LVNELVPLLEFWDAEKSV EVKRLFKGIANRS GSS+E SL ND
Sbjct: 539 ETERVLLTHTRNPLVNELVPLLEFWDAEKSVHEVKRLFKGIANRSFLGSSNEESLLNDDV 598
Query: 241 PEEKDGLNYLPDVLSELVNARENGSWALSALGGILFYLKQAFLDETLLRFAKFELLPCSG 300
P EKDGL YLPDVLSEL+NARENGSWALSALGGILFYLKQAFLDE LLRFAKFELLPCSG
Sbjct: 599 PGEKDGLGYLPDVLSELINARENGSWALSALGGILFYLKQAFLDEALLRFAKFELLPCSG 658
Query: 301 FSDVISKPYMVLDAAALENLEIFENSKNGDSSGTLYSQLNHCVTAFGKRLLKTWLARPLY 360
F+DVISKPYMVLDAAALENLEIFENS+NG SSGTLYSQLNHCVTAFGKRLLKTWLARPLY
Sbjct: 659 FNDVISKPYMVLDAAALENLEIFENSRNGGSSGTLYSQLNHCVTAFGKRLLKTWLARPLY 718
Query: 361 HVESIKARQGAVASLRGDNLSCSLEFRKALSKLPDMERLLARIFASSEANGRNAKNVVLY 420
HVESIKARQGAVASLRGDNLS SLEFRKALSKL DMERLLARIFASSEANGRNA NVVLY
Sbjct: 719 HVESIKARQGAVASLRGDNLSYSLEFRKALSKLTDMERLLARIFASSEANGRNATNVVLY 778
Query: 421 EDAAKKQLQEFISALRGCELMLQACSSLRVILKNVESKRLDCLLTPGEGLPDLYSVLSHF 480
EDAAK+QLQEFISALRGCELMLQACSSLRVIL+NVES+RLDCLLTPGEGLPDL SVLSHF
Sbjct: 779 EDAAKRQLQEFISALRGCELMLQACSSLRVILENVESRRLDCLLTPGEGLPDLQSVLSHF 838
Query: 481 KDAFDWVEANSSGRIMPHEGVDVEHDSACEKIKEIQSSLAKHLKEQRKLLGDTSITYVTV 540
KDAFDW EANSSGRI+PHEGVDVE+DSAC+KIKEIQS L KHLKEQRKLLGDTSITYVTV
Sbjct: 839 KDAFDWGEANSSGRIIPHEGVDVEYDSACKKIKEIQSDLTKHLKEQRKLLGDTSITYVTV 898
Query: 541 GKETHLLEVPESLQGNIPRSYELRSSKKGFFRYWTPTIKSLLAELSLAESEKESSLKSIL 600
GKETHLLEVPESLQG+IP++YELRSSKKGFFRYWTP IK LLAELSLAESEKESSLKSIL
Sbjct: 899 GKETHLLEVPESLQGSIPQNYELRSSKKGFFRYWTPNIKKLLAELSLAESEKESSLKSIL 958
Query: 601 QRLIGKFCEYHLQWRQLVSAIAELDVLISLAIASDYYEGHACQPLFSKLQCQKKVPCFSA 660
QRLIGKFCE+HLQWRQLVSA+AELDVLISLAIASDYYEG ACQPLFSK QCQK+VP FSA
Sbjct: 959 QRLIGKFCEHHLQWRQLVSAVAELDVLISLAIASDYYEGGACQPLFSKSQCQKEVPRFSA 1018
Query: 661 KNLGHPTLRSDSLGEGTFVPNDVNIGGSGANFILLTGPNMGGKSTLLRQVCLSVILAQMG 720
KNLGHP L+SDSLGEGTFVPND+NIGGS A+FILLTGPNMGGKSTLLRQVCLSV+LAQ+G
Sbjct: 1019 KNLGHPILKSDSLGEGTFVPNDINIGGSSASFILLTGPNMGGKSTLLRQVCLSVVLAQIG 1078
Query: 721 ADVPAESFELAPVDRIFVRMGAKDQIMSGQSTFLTELSETALMLSSATRNSLVILDELGR 780
ADVPAESFELAPVDRIFVRMGAKDQIMSGQSTFLTELSETALMLSSATRNSLVILDELGR
Sbjct: 1079 ADVPAESFELAPVDRIFVRMGAKDQIMSGQSTFLTELSETALMLSSATRNSLVILDELGR 1138
Query: 781 GTATSDGQAIAESVLEHFVSKVQCRGIFSTHYHRLALTYHKDPRVSLCHMACRVGEGTGG 840
GTATSDGQAIAESVLEHFVSKVQCRG+FSTHYHRLAL Y KDPRVSL HMACRVGEGTGG
Sbjct: 1139 GTATSDGQAIAESVLEHFVSKVQCRGVFSTHYHRLALAYCKDPRVSLYHMACRVGEGTGG 1198
Query: 841 LEEVTFLYRLTPGSCPKSYGVNVARLAGIPNCVLTEAAAKSREFEATYGMTGEESEDNLC 900
+EEVTFLYRLT G+CPKSYGVNVARLAG+PNCVLTEAAAKSREFEATYG+TGEESE+NLC
Sbjct: 1199 VEEVTFLYRLTSGTCPKSYGVNVARLAGLPNCVLTEAAAKSREFEATYGITGEESEENLC 1258
Query: 901 NHAWVDNTVTLIQKLISLESTVKCNDETKKNSIGSLKQLQQQARILVQQG 951
NH+WVD TVTLIQKLISLEST++CNDET+KN I SLKQLQQQARILVQQG
Sbjct: 1259 NHSWVDGTVTLIQKLISLESTLRCNDETEKNGISSLKQLQQQARILVQQG 1308
BLAST of Sed0020923 vs. ExPASy Swiss-Prot
Match:
O04716 (DNA mismatch repair protein MSH6 OS=Arabidopsis thaliana OX=3702 GN=MSH6 PE=1 SV=2)
HSP 1 Score: 1253.8 bits (3243), Expect = 0.0e+00
Identity = 639/900 (71.00%), Postives = 743/900 (82.56%), Query Frame = 0
Query: 1 MDKVLFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPEKNFSLNVEKLARKGYRV 60
MDKV+FFKMGKFYELFEMDAHVGAKELD+QYMKGEQPHCGFPEKNFS+N+EKL RKGYRV
Sbjct: 394 MDKVVFFKMGKFYELFEMDAHVGAKELDIQYMKGEQPHCGFPEKNFSVNIEKLVRKGYRV 453
Query: 61 LVIEQTETPEQLERRRKEKGSKDKVVKREICAVVTKGTLTEGEMLSLNPDASYLMSVTEK 120
LV+EQTETP+QLE+RRKE GSKDKVVKRE+CAVVTKGTLT+GEML NPDASYLM++TE
Sbjct: 454 LVVEQTETPDQLEQRRKETGSKDKVVKREVCAVVTKGTLTDGEMLLTNPDASYLMALTEG 513
Query: 121 FHGLENQQTERILGVCLVDAATSRIILGQFGDDLECSALCSLLSELRPVEIVKPAKLLSP 180
L N E GVCLVD AT +IILGQF DD +CSAL LLSE+RPVEI+KPAK+LS
Sbjct: 514 GESLTNPTAEHNFGVCLVDVATQKIILGQFKDDQDCSALSCLLSEMRPVEIIKPAKVLSY 573
Query: 181 ETERVLLTHTRNSLVNELVPLLEFWDAEKSVQEVKRLFKGIANRSVSGSSSEASLPNDVA 240
TER ++ TRN LVN LVPL EFWD+EK++ EV ++K I + S SSE +
Sbjct: 574 ATERTIVRQTRNPLVNNLVPLSEFWDSEKTIYEVGIIYKRINCQPSSAYSSEGKILG--- 633
Query: 241 PEEKDGLNYLPDVLSELVNARENGSWALSALGGILFYLKQAFLDETLLRFAKFELLPCSG 300
DG ++LP +LSEL +NGS ALSALGG ++YL+QAFLDE+LLRFAKFE LP
Sbjct: 634 ----DGSSFLPKMLSELATEDKNGSLALSALGGAIYYLRQAFLDESLLRFAKFESLPYCD 693
Query: 301 FSDVISKPYMVLDAAALENLEIFENSKNGDSSGTLYSQLNHCVTAFGKRLLKTWLARPLY 360
FS+V K +MVLDAAALENLEIFENS+NG SGTLY+QLN C+TA GKRLLKTWLARPLY
Sbjct: 694 FSNVNEKQHMVLDAAALENLEIFENSRNGGYSGTLYAQLNQCITASGKRLLKTWLARPLY 753
Query: 361 HVESIKARQGAVASLRGDNLSCSLEFRKALSKLPDMERLLARIFASSEANGRNAKNVVLY 420
+ E IK RQ AVA LRG+NL SLEFRK+LS+LPDMERL+AR+F+S EA+GRN VVLY
Sbjct: 754 NTELIKERQDAVAILRGENLPYSLEFRKSLSRLPDMERLIARMFSSIEASGRNGDKVVLY 813
Query: 421 EDAAKKQLQEFISALRGCELMLQACSSLRVILKNVESKRLDCLLTPGEGLPDLYSVLSHF 480
ED AKKQ+QEFIS LRGCE M +ACSSLR ILK+ S+RL LLTPG+ LP++ S + +F
Sbjct: 814 EDTAKKQVQEFISTLRGCETMAEACSSLRAILKHDTSRRLLHLLTPGQSLPNISSSIKYF 873
Query: 481 KDAFDWVEANSSGRIMPHEGVDVEHDSACEKIKEIQSSLAKHLKEQRKLLGDTSITYVTV 540
KDAFDWVEA++SGR++PHEG D E+D AC+ ++E +SSL KHLKEQRKLLGD SI YVTV
Sbjct: 874 KDAFDWVEAHNSGRVIPHEGADEEYDCACKTVEEFESSLKKHLKEQRKLLGDASINYVTV 933
Query: 541 GKETHLLEVPESLQGNIPRSYELRSSKKGFFRYWTPTIKSLLAELSLAESEKESSLKSIL 600
GK+ +LLEVPESL G++P YEL SSKKG RYWTPTIK LL ELS A+SEKES+LKSI
Sbjct: 934 GKDEYLLEVPESLSGSVPHDYELCSSKKGVSRYWTPTIKKLLKELSQAKSEKESALKSIS 993
Query: 601 QRLIGKFCEYHLQWRQLVSAIAELDVLISLAIASDYYEGHACQPLFSKLQCQKKVPCFSA 660
QRLIG+FCE+ +WRQLVSA AELDVLISLA ASD YEG C+P+ S VP SA
Sbjct: 994 QRLIGRFCEHQEKWRQLVSATAELDVLISLAFASDSYEGVRCRPVISG-STSDGVPHLSA 1053
Query: 661 KNLGHPTLRSDSLGEGTFVPNDVNIGGS-GANFILLTGPNMGGKSTLLRQVCLSVILAQM 720
LGHP LR DSLG G+FVPN+V IGG+ A+FILLTGPNMGGKSTLLRQVCL+VILAQ+
Sbjct: 1054 TGLGHPVLRGDSLGRGSFVPNNVKIGGAEKASFILLTGPNMGGKSTLLRQVCLAVILAQI 1113
Query: 721 GADVPAESFELAPVDRIFVRMGAKDQIMSGQSTFLTELSETALMLSSATRNSLVILDELG 780
GADVPAE+FE++PVD+I VRMGAKD IM+GQSTFLTELSETA+ML+SATRNSLV+LDELG
Sbjct: 1114 GADVPAETFEVSPVDKICVRMGAKDHIMAGQSTFLTELSETAVMLTSATRNSLVVLDELG 1173
Query: 781 RGTATSDGQAIAESVLEHFVSKVQCRGIFSTHYHRLALTYHKDPRVSLCHMACRVGEGTG 840
RGTATSDGQAIAESVLEHF+ KVQCRG FSTHYHRL++ Y +P+VSLCHMAC++GEG G
Sbjct: 1174 RGTATSDGQAIAESVLEHFIEKVQCRGFFSTHYHRLSVDYQTNPKVSLCHMACQIGEGIG 1233
Query: 841 GLEEVTFLYRLTPGSCPKSYGVNVARLAGIPNCVLTEAAAKSREFEATYGMTGEESEDNL 900
G+EEVTFLYRLTPG+CPKSYGVNVARLAG+P+ VL A KS+EFEA YG +++ L
Sbjct: 1234 GVEEVTFLYRLTPGACPKSYGVNVARLAGLPDYVLQRAVIKSQEFEALYGKNHRKTDHKL 1285
BLAST of Sed0020923 vs. ExPASy Swiss-Prot
Match:
P54276 (DNA mismatch repair protein Msh6 OS=Mus musculus OX=10090 GN=Msh6 PE=1 SV=3)
HSP 1 Score: 604.0 bits (1556), Expect = 3.0e-171
Identity = 386/924 (41.77%), Postives = 520/924 (56.28%), Query Frame = 0
Query: 2 DKVLFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPEKNFSLNVEKLARKGYRVL 61
D V+F+K+GKFYEL+ MDA +G EL L +MKG H GFPE F + L +KGY+V
Sbjct: 421 DLVIFYKVGKFYELYHMDAVIGVSELGLIFMKGNWAHSGFPEIAFGRFSDSLVQKGYKVA 480
Query: 62 VIEQTETPEQLERRRKEKG--SK-DKVVKREICAVVTKGTLTEGEMLSLNPD---ASYLM 121
+EQTETPE +E R ++ SK D+VV+REIC ++TKGT T +L +P + YL+
Sbjct: 481 RVEQTETPEMMEARCRKMAHVSKFDRVVRREICRIITKGTQTY-SVLDGDPSENYSRYLL 540
Query: 122 SVTEKFHGLENQQTERILGVCLVDAATSRIILGQFGDDLECSALCSLLSELRPVEIVKPA 181
S+ EK E R+ GVC VD + + +GQF DD CS +L++ PV+I+
Sbjct: 541 SLKEKEE--ETSGHTRVYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQILFEK 600
Query: 182 KLLSPETERVLLTHTRNSLVNELVPLLEFWDAEKSVQEVKRLFKGIANRSVSGSSSEASL 241
LS ET+ VL + L L+P +FWDA K+ ++ L +G SS+ L
Sbjct: 601 GNLSTETKTVLKGSLSSCLQEGLIPGSQFWDATKT---LRTLLEGGYFTGNGDSSTVLPL 660
Query: 242 PNDVAPEEKDGLNYLPDVLSELVNARENGSWALSALGGILFYLKQAFLDETLLRFAKF-E 301
E D + P SEL ALSALGGI+FYLK+ +D+ LL A F E
Sbjct: 661 VLKGMTSESDSVGLTPGEESEL---------ALSALGGIVFYLKKCLIDQELLSMANFEE 720
Query: 302 LLPCSGFSDVIS--KP---------YMVLDAAALENLEIFENSKNGDSSGTLYSQLNHCV 361
P SD +S KP MVLDA L NLEIF N NG + GTL +L+ C
Sbjct: 721 YFPLD--SDTVSTVKPGAVFTKASQRMVLDAVTLNNLEIFLNGTNGSTEGTLLERLDTCH 780
Query: 362 TAFGKRLLKTWLARPLYHVESIKARQGAVASLRG--DNLSCSLEFRKALSKLPDMERLLA 421
T FGKRLLK WL PL +I R AV L D ++ E L KLPD+ERLL+
Sbjct: 781 TPFGKRLLKQWLCAPLCSPSAISDRLDAVEDLMAVPDKVT---EVADLLKKLPDLERLLS 840
Query: 422 RIF---ASSEANGRNAKNVVLYEDA--AKKQLQEFISALRGCELMLQACSSLRVILKNVE 481
+I + ++ ++YE+ +KK++ +F+SAL G ++M + L +
Sbjct: 841 KIHNVGSPLKSQNHPDSRAIMYEETTYSKKKIIDFLSALEGFKVMCKVSGLLEEVAGGFT 900
Query: 482 SKRLDCLLT-----PGEGLPDLYSVLSHFKDAFDWVEANSSGRIMPHEGVDVEHDSACEK 541
SK L ++T P PDL + L + AFD +A +G I P G D ++D A
Sbjct: 901 SKTLKQVVTLQSKSPKGRFPDLTAELQRWDTAFDHEKARKTGLITPKAGFDSDYDQALAD 960
Query: 542 IKEIQSSLAKHLKEQRKLLGDTSITYVTVGKETHLLEVPESL-QGNIPRSYELRSSKKGF 601
I+E + SL ++L +QR LG SI Y +G+ + LE+PE+ N+P YEL+S+KKG
Sbjct: 961 IRENEQSLLEYLDKQRSRLGCKSIVYWGIGRNRYQLEIPENFATRNLPEEYELKSTKKGC 1020
Query: 602 FRYWTPTIKSLLAELSLAESEKESSLKSILQRLIGKFCEYHLQWRQLVSAIAELDVLISL 661
RYWT TI+ LA L AE +++SLK ++RL F + H W+ V IA LDVL+ L
Sbjct: 1021 KRYWTKTIEKKLANLINAEERRDTSLKDCMRRLFCNFDKNHKDWQSAVECIAVLDVLLCL 1080
Query: 662 AIASDYYEGHACQPLFSKLQCQKKVPCFSAKNLGHPTLRSDSLGEGTFVPNDVNIG---- 721
A S +G C+P L + P K HP + G+ F+PND+ IG
Sbjct: 1081 ANYSQGGDGPMCRPEI-VLPGEDTHPFLEFKGSRHPCITKTFFGD-DFIPNDILIGCEEE 1140
Query: 722 ---GSGANFILLTGPNMGGKSTLLRQVCLSVILAQMGADVPAESFELAPVDRIFVRMGAK 781
A +L+TGPNMGGKSTL+RQ L ++AQ+G VPAE L PVDR+F R+GA
Sbjct: 1141 AEEHGKAYCVLVTGPNMGGKSTLIRQAGLLAVMAQLGCYVPAEKCRLTPVDRVFTRLGAS 1200
Query: 782 DQIMSGQSTFLTELSETALMLSSATRNSLVILDELGRGTATSDGQAIAESVLEHFVSKVQ 841
D+IMSG+STF ELSETA +L AT +SLV++DELGRGTAT DG AIA +V++ ++
Sbjct: 1201 DRIMSGESTFFVELSETASILRHATAHSLVLVDELGRGTATFDGTAIANAVVKELAETIK 1260
Query: 842 CRGIFSTHYHRLALTYHKDPRVSLCHMACRVGE--GTGGLEEVTFLYRLTPGSCPKSYGV 886
CR +FSTHYH L Y K V L HMAC V E +TFLY+ G+CPKSYG
Sbjct: 1261 CRTLFSTHYHSLVEDYSKSVCVRLGHMACMVENECEDPSQETITFLYKFIKGACPKSYGF 1320
BLAST of Sed0020923 vs. ExPASy Swiss-Prot
Match:
E1BYJ2 (DNA mismatch repair protein Msh6 OS=Gallus gallus OX=9031 GN=MSH6 PE=3 SV=2)
HSP 1 Score: 601.3 bits (1549), Expect = 1.9e-170
Identity = 365/921 (39.63%), Postives = 518/921 (56.24%), Query Frame = 0
Query: 2 DKVLFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPEKNFSLNVEKLARKGYRVL 61
D V+ +K+GKFYEL+ MDA G EL L +MKG H GFPE F L +KGY++
Sbjct: 401 DAVICYKVGKFYELYHMDAVTGVNELGLIFMKGSWAHSGFPETAFGRFSAILVQKGYKIA 460
Query: 62 VIEQTETPEQLERRRKEKGSK---DKVVKREICAVVTKGTLTEGEMLSLNPDAS---YLM 121
+EQTETPE +E R K DKVV+REIC ++TKGT T ++ +P + YL+
Sbjct: 461 RVEQTETPEMMEARCKATAHTTKFDKVVRREICRIITKGTQTY-SIIDCDPTENHNKYLL 520
Query: 122 SVTEKFHGLENQQTERILGVCLVDAATSRIILGQFGDDLECSALCSLLSELRPVEIVKPA 181
V EK E+ +R+ GVC VD + + +GQF DD CS +L++ PV+++
Sbjct: 521 CVKEK----EDSSGQRVYGVCFVDTSVGKFYVGQFSDDRHCSRFRTLVAHYTPVQVLFEK 580
Query: 182 KLLSPETERVLLTHTRNSLVNELVPLLEFWDAEKSVQEVKRLFKGIANRSVSGSSSEASL 241
L+ +T+++L + + L+ +FW A K+ +K L + + + S L
Sbjct: 581 GNLTVDTQKILKGSLISCIQEGLISGSQFWSASKT---LKVLLEEEYFKENQNTESGCVL 640
Query: 242 PNDV--APEEKDGLNYLPDVLSELVNARENGSWALSALGGILFYLKQAFLDETLLRFAKF 301
P+ + E D L P EN ALSALGGI+FYLK+ +D+ LL A F
Sbjct: 641 PSVIKSLTSESDSLGLTPG---------ENSELALSALGGIVFYLKKCLIDQELLSLANF 700
Query: 302 EL---LPCSGFSDVISKPY-------MVLDAAALENLEIFENSKNGDSSGTLYSQLNHCV 361
E + V S + MVLD L NLE+ +N NG + GTL +++ C
Sbjct: 701 EKYIPVDADNAKTVSSSNFFARTDRRMVLDGVTLMNLEVLQNGTNGTTEGTLLERIDSCC 760
Query: 362 TAFGKRLLKTWLARPLYHVESIKARQGAVASLRGDNLSCSLEFRKALSKLPDMERLLARI 421
T FGKRLLK WL PL + SI R AV L + E + L KLPD+ERLL++I
Sbjct: 761 TPFGKRLLKQWLCAPLCNPTSINDRLDAVEDLLAVPAKLT-EITEHLKKLPDLERLLSKI 820
Query: 422 FASS---EANGRNAKNVVLYEDA--AKKQLQEFISALRGCELMLQACSSLRVILKNVESK 481
+ ++ + YE+ +KK++ +F+SAL G ++M + ++ + + +S+
Sbjct: 821 HSIGSPLKSQNHPDSRAIFYEEIKYSKKKIADFLSALEGFKVMNEIVDAMEEVASDFKSQ 880
Query: 482 RLDCLLT-----PGEGLPDLYSVLSHFKDAFDWVEANSSGRIMPHEGVDVEHDSACEKIK 541
L L+T P PDL + L + AFD +A +G I P G D ++D A + IK
Sbjct: 881 VLKQLVTRKAKHPDGRFPDLSAELKRWDTAFDHNQARKTGVITPKAGFDPDYDKALQDIK 940
Query: 542 EIQSSLAKHLKEQRKLLGDTSITYVTVGKETHLLEVPESLQG-NIPRSYELRSSKKGFFR 601
++ +L +QRKLLG S+ Y GK + +E+PE+ N+P YEL+S++KG+ R
Sbjct: 941 TVEEDFRTYLDKQRKLLGLKSVLYWGTGKNRYQMEIPETATSRNLPEEYELKSTRKGYKR 1000
Query: 602 YWTPTIKSLLAELSLAESEKESSLKSILQRLIGKFCEYHLQWRQLVSAIAELDVLISLAI 661
YWT I+ +LAEL AE ++++LK ++RL F + W+ V IA LDVL+SLA
Sbjct: 1001 YWTKEIEKMLAELINAEERRDAALKDCMRRLFYNFDKNSQDWQTAVQCIAVLDVLMSLAN 1060
Query: 662 ASDYYEGHACQPLFSKLQCQKKVPCFSAKNLGHPTLRSDSLGEGTFVPNDVNI------G 721
S +G C+P+ L P KN HP + G+ F+PND+ I G
Sbjct: 1061 YSQDGDGPLCRPVI-LLPVDSAPPFLELKNARHPCITKTFFGD-DFIPNDIVIGSKDEDG 1120
Query: 722 GSGANFILLTGPNMGGKSTLLRQVCLSVILAQMGADVPAESFELAPVDRIFVRMGAKDQI 781
GS A+ +L+TGPNMGGKSTL+RQ L VI+AQ+G VPAE L P+DR+F R+GA D+I
Sbjct: 1121 GSEASCVLVTGPNMGGKSTLMRQAGLLVIMAQLGCYVPAEVCRLTPIDRVFTRLGASDRI 1180
Query: 782 MSGQSTFLTELSETALMLSSATRNSLVILDELGRGTATSDGQAIAESVLEHFVSKVQCRG 841
MSG+STF ELSET+ +L AT +SLV++DELGRGTAT DG AIA +V+ ++CR
Sbjct: 1181 MSGESTFFVELSETSSILQHATEHSLVLVDELGRGTATFDGTAIASAVVRELAENIKCRT 1240
Query: 842 IFSTHYHRLALTYHKDPRVSLCHMACRVGEGT--GGLEEVTFLYRLTPGSCPKSYGVNVA 886
+FSTHYH L Y V L HMAC V + E +TFLY+ G+CPKSYG N A
Sbjct: 1241 LFSTHYHSLVEDYSGSAAVRLGHMACMVENESEDPSQETITFLYKFIEGACPKSYGFNAA 1300
BLAST of Sed0020923 vs. ExPASy Swiss-Prot
Match:
P52701 (DNA mismatch repair protein Msh6 OS=Homo sapiens OX=9606 GN=MSH6 PE=1 SV=2)
HSP 1 Score: 590.1 bits (1520), Expect = 4.4e-167
Identity = 372/926 (40.17%), Postives = 522/926 (56.37%), Query Frame = 0
Query: 2 DKVLFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPEKNFSLNVEKLARKGYRVL 61
D V+ +K+GKFYEL+ MDA +G EL L +MKG H GFPE F + L +KGY+V
Sbjct: 422 DLVICYKVGKFYELYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVA 481
Query: 62 VIEQTETPEQLERRRKEK---GSKDKVVKREICAVVTKGTLTEGEMLSLNPD---ASYLM 121
+EQTETPE +E R ++ D+VV+REIC ++TKGT T +L +P + YL+
Sbjct: 482 RVEQTETPEMMEARCRKMAHISKYDRVVRREICRIITKGTQTY-SVLEGDPSENYSKYLL 541
Query: 122 SVTEKFHGLENQQTERILGVCLVDAATSRIILGQFGDDLECSALCSLLSELRPVEIVKPA 181
S+ EK ++ R GVC VD + + +GQF DD CS +L++ PV+++
Sbjct: 542 SLKEKEE--DSSGHTRAYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEK 601
Query: 182 KLLSPETERVLLTHTRNSLVNELVPLLEFWDAEKSVQEVKRLFKGIANRSVSGSSSEASL 241
LS ET+ +L + SL L+P +FWDA K+ ++ L + R L
Sbjct: 602 GNLSKETKTILKSSLSCSLQEGLIPGSQFWDASKT---LRTLLEEEYFREKLSDGIGVML 661
Query: 242 PNDV--APEEKDGLNYLPDVLSELVNARENGSWALSALGGILFYLKQAFLDETLLRFAKF 301
P + E D + P SEL ALSALGG +FYLK+ +D+ LL A F
Sbjct: 662 PQVLKGMTSESDSIGLTPGEKSEL---------ALSALGGCVFYLKKCLIDQELLSMANF 721
Query: 302 -ELLPCSGFSDVIS---------KPY--MVLDAAALENLEIFENSKNGDSSGTLYSQLNH 361
E +P SD +S K Y MVLDA L NLEIF N NG + GTL +++
Sbjct: 722 EEYIPLD--SDTVSTTRSGAIFTKAYQRMVLDAVTLNNLEIFLNGTNGSTEGTLLERVDT 781
Query: 362 CVTAFGKRLLKTWLARPLYHVESIKARQGAVASLR--GDNLSCSLEFRKALSKLPDMERL 421
C T FGKRLLK WL PL + +I R A+ L D +S E + L KLPD+ERL
Sbjct: 782 CHTPFGKRLLKQWLCAPLCNHYAINDRLDAIEDLMVVPDKIS---EVVELLKKLPDLERL 841
Query: 422 LARIF---ASSEANGRNAKNVVLYEDA--AKKQLQEFISALRGCELMLQACSSLRVILKN 481
L++I + ++ ++YE+ +KK++ +F+SAL G ++M + + +
Sbjct: 842 LSKIHNVGSPLKSQNHPDSRAIMYEETTYSKKKIIDFLSALEGFKVMCKIIGIMEEVADG 901
Query: 482 VESKRLDCLLT-----PGEGLPDLYSVLSHFKDAFDWVEANSSGRIMPHEGVDVEHDSAC 541
+SK L +++ P PDL L+ + AFD +A +G I P G D ++D A
Sbjct: 902 FKSKILKQVISLQTKNPEGRFPDLTVELNRWDTAFDHEKARKTGLITPKAGFDSDYDQAL 961
Query: 542 EKIKEIQSSLAKHLKEQRKLLGDTSITYVTVGKETHLLEVPESL-QGNIPRSYELRSSKK 601
I+E + SL ++L++QR +G +I Y +G+ + LE+PE+ N+P YEL+S+KK
Sbjct: 962 ADIRENEQSLLEYLEKQRNRIGCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKK 1021
Query: 602 GFFRYWTPTIKSLLAELSLAESEKESSLKSILQRLIGKFCEYHLQWRQLVSAIAELDVLI 661
G RYWT TI+ LA L AE ++ SLK ++RL F + + W+ V IA LDVL+
Sbjct: 1022 GCKRYWTKTIEKKLANLINAEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLL 1081
Query: 662 SLAIASDYYEGHACQPLFSKLQCQKKVPCFSAKNLGHPTLRSDSLGEGTFVPNDVNIG-- 721
LA S +G C+P+ L + P K HP + G+ F+PND+ IG
Sbjct: 1082 CLANYSRGGDGPMCRPVI--LLPEDTPPFLELKGSRHPCITKTFFGD-DFIPNDILIGCE 1141
Query: 722 -----GSGANFILLTGPNMGGKSTLLRQVCLSVILAQMGADVPAESFELAPVDRIFVRMG 781
A +L+TGPNMGGKSTL+RQ L ++AQMG VPAE L P+DR+F R+G
Sbjct: 1142 EEEQENGKAYCVLVTGPNMGGKSTLMRQAGLLAVMAQMGCYVPAEVCRLTPIDRVFTRLG 1201
Query: 782 AKDQIMSGQSTFLTELSETALMLSSATRNSLVILDELGRGTATSDGQAIAESVLEHFVSK 841
A D+IMSG+STF ELSETA +L AT +SLV++DELGRGTAT DG AIA +V++
Sbjct: 1202 ASDRIMSGESTFFVELSETASILMHATAHSLVLVDELGRGTATFDGTAIANAVVKELAET 1261
Query: 842 VQCRGIFSTHYHRLALTYHKDPRVSLCHMACRVGE--GTGGLEEVTFLYRLTPGSCPKSY 886
++CR +FSTHYH L Y ++ V L HMAC V E +TFLY+ G+CPKSY
Sbjct: 1262 IKCRTLFSTHYHSLVEDYSQNVAVRLGHMACMVENECEDPSQETITFLYKFIKGACPKSY 1321
BLAST of Sed0020923 vs. ExPASy Swiss-Prot
Match:
Q9VUM0 (Probable DNA mismatch repair protein Msh6 OS=Drosophila melanogaster OX=7227 GN=Msh6 PE=1 SV=2)
HSP 1 Score: 517.3 bits (1331), Expect = 3.6e-145
Identity = 356/970 (36.70%), Postives = 516/970 (53.20%), Query Frame = 0
Query: 2 DKVLFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPEKNFSLNVEKLARKGYRVL 61
D VLFFK+GKFYEL+ MDA VG EL YM+GE H GFPE +F L +G++V
Sbjct: 277 DCVLFFKVGKFYELYHMDADVGVNELGFTYMRGEFAHSGFPEISFDKMSTILVDRGFKVA 336
Query: 62 VIEQTETPEQL-ERRRKEKGSK-DKVVKREICAVVTKGTLTEGEMLSLNPD--ASYLMSV 121
+EQTETP+ + ER ++ K +K DKVV REIC + +GT G + P+ +Y++++
Sbjct: 337 RVEQTETPDMMTERCKRIKATKFDKVVAREICQITNRGTQVFGSQCKIGPNHQPNYMLAI 396
Query: 122 TEKFHGLENQQTERILGVCLVDAATSRIILGQFGDDLECSALCSLLSELRPVEIVKPAKL 181
EK G T GVC +D + LG+F DD CS L +L+S PV +
Sbjct: 397 VEKDEG-----TCSRYGVCFIDTSIGDFHLGEFEDDKNCSRLLTLVSHHMPVLFLNEKSA 456
Query: 182 LSPETERVLLTHTRNSLVNELVPLLEFWDAEKSVQEVKRLFKGIANRSVSGSSSEASLPN 241
LS T++++ T ++ E VP K ++ K +A R +G S+ + P
Sbjct: 457 LSQRTQQIVRT-VLGGILKEPVP-----GNGKHACSAEKTLKLLAERYYAGPGSDDNWPL 516
Query: 242 DVAPEEKDGLNYLPDVLSELVNARENGSWALSALGGILFYLKQAFLDETLLRFAKFEL-L 301
+ + D +++L + +N AL ALG +F++ + L+ +L A+++L +
Sbjct: 517 VLRTMQSD-MDHLG------LTPNDNYKLALKALGQCIFFIHKCKLEPKVLPMARYQLYV 576
Query: 302 PCSGFSD-------VISKPYMVLDAAALENLEIFENSKNGDSSGTLYSQLNHCVTAFGKR 361
P +D + + +MVLDA L NL I +L S L+HC T FGKR
Sbjct: 577 PPDQLADAKPAVASTLRRSHMVLDATTLSNLRII------GEEHSLLSTLDHCCTKFGKR 636
Query: 362 LLKTWLARPLYHVESIKARQGAVASLRGDNLSCSLEFRKALSKLPDMERLLARI--FASS 421
LL WL P V IK RQ A+ L E R L+ +PD ER LA+I F +
Sbjct: 637 LLHHWLCAPSCDVSVIKERQDAIGELIRMPTELQ-EVRALLAPMPDFERNLAQIHLFGNK 696
Query: 422 EANGRN--AKNVVLYEDAA--KKQLQEFISALRGCELMLQACSSLRVILKNVESKRLDCL 481
+ + +L+E+ K++LQ F++ L+G + + + K KR+ L
Sbjct: 697 QIKQMDHPDSRAILFEEKLYNKQKLQGFMAVLKGFNDLTKLPTMFHQ-CKTTLLKRITQL 756
Query: 482 LTPGEGLPDLYSVLSHFKDAFDWVEANSSGRIMPHEGVDVEHDSACEKIKEIQSSLAKHL 541
G PDL L +F AFD A +G I P G+D E+D+A + I E++ L +L
Sbjct: 757 PESGGSFPDLSKELQYFATAFDHDAAAKTGVIAPQAGMDAEYDAAMDSIGEVEKRLKTYL 816
Query: 542 KEQRKLLGDTSITYVTVGKETHLLEVPESLQGNIPRSYELRSSKKG---FFRYWTPTIKS 601
EQ + G ITY K+ + L+VPES +SY L KG RY T ++
Sbjct: 817 VEQERHFG-CRITYFGSDKKRYQLDVPESHASKANKSYTLEGQTKGKKPSRRYTTAETRA 876
Query: 602 LLAELSLAESEKESSLKSILQRLIGKFCEYHLQWRQLVSAIAELDVLISLAIASDYYEGH 661
LL ++ AE + LK + +RL KF ++ QW+Q + +A LDVL SLA Y G
Sbjct: 877 LLKDMQHAEDTRNMVLKDLARRLFEKFSNHYDQWKQCIDCVANLDVLGSLA----EYAGQ 936
Query: 662 ACQPLFSKLQCQKKVPCFSAKNLGHPTLRSDSLGEGTFVPNDVNIG-GSGANFILLTGPN 721
+L P + HP + T++PN + +G S A LLTGPN
Sbjct: 937 QMVICVPELVSDADQPFIQLEEGYHPCANA-----STYIPNGLELGTASEAPLSLLTGPN 996
Query: 722 MGGKSTLLRQVCLSVILAQMGADVPAESFELAPVDRIFVRMGAKDQIMSGQSTFLTELSE 781
MGGKSTL+R+V L VI+AQ+GA +PA S L+ VDRIF R+GA+D I++G STFL EL+E
Sbjct: 997 MGGKSTLMREVGLLVIMAQIGAHIPAASCRLSLVDRIFTRLGAQDDILAGHSTFLVELNE 1056
Query: 782 TALMLSSATRNSLVILDELGRGTATSDGQAIAESVLEHFVSKVQCRGIFSTHYHRLALTY 841
T+L+L AT +SLV+LDELGRGTAT DG AIA SV+ +F++ ++CR +FSTHYH L +
Sbjct: 1057 TSLILKHATCHSLVLLDELGRGTATYDGTAIAASVV-NFLANLKCRTLFSTHYHNLIDFF 1116
Query: 842 HKDPRVSLCHMACRVGEGTGG---LEEVTFLYRLTPGSCPKSYGVNVARLAGIPNCVLTE 901
H D R++L HMAC V E VTFLY+ T G+CPKSYG N A+LAG+P ++
Sbjct: 1117 HNDKRITLGHMACMVENEDNADPTQETVTFLYKYTAGACPKSYGFNAAKLAGMPQGIIKR 1176
Query: 902 AAAKSREFEATYGMTGEESEDNLCNHAWVDNTVTLIQKLIS-LESTVKCNDETKKNSIGS 946
A S++ EA + L +K+ + + + N++TKK I +
Sbjct: 1177 AYELSKKVEA----------------------IALQRKITAKIVAATAGNEDTKKEKINA 1187
BLAST of Sed0020923 vs. ExPASy TrEMBL
Match:
A0A1S3BQZ5 (DNA mismatch repair protein OS=Cucumis melo OX=3656 GN=LOC103492760 PE=3 SV=1)
HSP 1 Score: 1739.9 bits (4505), Expect = 0.0e+00
Identity = 879/950 (92.53%), Postives = 917/950 (96.53%), Query Frame = 0
Query: 1 MDKVLFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPEKNFSLNVEKLARKGYRV 60
MDKVLFFKMGKFYELFEMDAH+GAKELDLQYMKGEQPHCGFPE+NFSLNVEKLARKGYRV
Sbjct: 362 MDKVLFFKMGKFYELFEMDAHIGAKELDLQYMKGEQPHCGFPERNFSLNVEKLARKGYRV 421
Query: 61 LVIEQTETPEQLERRRKEKGSKDKVVKREICAVVTKGTLTEGEMLSLNPDASYLMSVTEK 120
LVIEQTETPEQLERRRKEKGSKDKVVKREICAVVTKGTLTEGEMLSLNPDASYLM+VTEK
Sbjct: 422 LVIEQTETPEQLERRRKEKGSKDKVVKREICAVVTKGTLTEGEMLSLNPDASYLMAVTEK 481
Query: 121 FHGLENQQTERILGVCLVDAATSRIILGQFGDDLECSALCSLLSELRPVEIVKPAKLLSP 180
FHGLENQQ ERILGVC+VD ATSR+ILGQFGDDLECSALC LLSELRPVEI+KPAKLLSP
Sbjct: 482 FHGLENQQAERILGVCVVDVATSRVILGQFGDDLECSALCCLLSELRPVEIIKPAKLLSP 541
Query: 181 ETERVLLTHTRNSLVNELVPLLEFWDAEKSVQEVKRLFKGIANRSVSGSSSEASLPNDVA 240
ETERVLLTHTRN LVNELVPLLEFW+AEK+VQEVKRLFKGIANRSVSGSSSEASL ND
Sbjct: 542 ETERVLLTHTRNPLVNELVPLLEFWNAEKTVQEVKRLFKGIANRSVSGSSSEASLLNDDT 601
Query: 241 PEEKDGLNYLPDVLSELVNARENGSWALSALGGILFYLKQAFLDETLLRFAKFELLPCSG 300
P E DGL++LP VLSELV A+ENGSWALSALGGILFYLKQAFLDETLLRFAKFELLPCSG
Sbjct: 602 PGENDGLSFLPVVLSELVTAQENGSWALSALGGILFYLKQAFLDETLLRFAKFELLPCSG 661
Query: 301 FSDVISKPYMVLDAAALENLEIFENSKNGDSSGTLYSQLNHCVTAFGKRLLKTWLARPLY 360
FSDVISKPYMVLDAAALENLEIFENS+NGDSSGTLYSQLNHCVTAFGKRLLKTWLARPLY
Sbjct: 662 FSDVISKPYMVLDAAALENLEIFENSRNGDSSGTLYSQLNHCVTAFGKRLLKTWLARPLY 721
Query: 361 HVESIKARQGAVASLRGDNLSCSLEFRKALSKLPDMERLLARIFASSEANGRNAKNVVLY 420
VESIKARQGAVASLRGDNLS SLEFRKALSKLPDMERLLARIF++SEANGRNAKNVVLY
Sbjct: 722 DVESIKARQGAVASLRGDNLSFSLEFRKALSKLPDMERLLARIFSNSEANGRNAKNVVLY 781
Query: 421 EDAAKKQLQEFISALRGCELMLQACSSLRVILKNVESKRLDCLLTPGEGLPDLYSVLSHF 480
EDAAKKQLQEFISALRGCELMLQACSSL VIL +VES+RL+CLLTPGEGLPDL+SVLSHF
Sbjct: 782 EDAAKKQLQEFISALRGCELMLQACSSLHVILPSVESRRLNCLLTPGEGLPDLHSVLSHF 841
Query: 481 KDAFDWVEANSSGRIMPHEGVDVEHDSACEKIKEIQSSLAKHLKEQRKLLGDTSITYVTV 540
KDAFDWVEANSSGR++P EGVDVE+DSACEKIKEIQSSL KHLKEQRKLLGDTSITYVTV
Sbjct: 842 KDAFDWVEANSSGRVIPREGVDVEYDSACEKIKEIQSSLTKHLKEQRKLLGDTSITYVTV 901
Query: 541 GKETHLLEVPESLQGNIPRSYELRSSKKGFFRYWTPTIKSLLAELSLAESEKESSLKSIL 600
GKETHLLEVPESLQGNIP++YELRSSKKGFFRYWTP IK LL ELSLAESEKESSLKSIL
Sbjct: 902 GKETHLLEVPESLQGNIPQTYELRSSKKGFFRYWTPNIKKLLVELSLAESEKESSLKSIL 961
Query: 601 QRLIGKFCEYHLQWRQLVSAIAELDVLISLAIASDYYEGHACQPLFSKLQCQKKVPCFSA 660
QRLIGKFCE+HLQWRQLVSAIAELDVLISLAIASDYYEG+ CQPLFSK QCQ +VP F+A
Sbjct: 962 QRLIGKFCEHHLQWRQLVSAIAELDVLISLAIASDYYEGYTCQPLFSKSQCQSEVPRFTA 1021
Query: 661 KNLGHPTLRSDSLGEGTFVPNDVNIGGSGANFILLTGPNMGGKSTLLRQVCLSVILAQMG 720
KNLGHP LRSDSLGEGTFVPND+ IGGSGANFILLTGPNMGGKSTLLRQVCLS+ILAQ+G
Sbjct: 1022 KNLGHPILRSDSLGEGTFVPNDITIGGSGANFILLTGPNMGGKSTLLRQVCLSIILAQIG 1081
Query: 721 ADVPAESFELAPVDRIFVRMGAKDQIMSGQSTFLTELSETALMLSSATRNSLVILDELGR 780
ADVPAESFELAPVDRIFVRMGAKDQIMSGQSTFLTELSETALMLSSATRNSLVILDELGR
Sbjct: 1082 ADVPAESFELAPVDRIFVRMGAKDQIMSGQSTFLTELSETALMLSSATRNSLVILDELGR 1141
Query: 781 GTATSDGQAIAESVLEHFVSKVQCRGIFSTHYHRLALTYHKDPRVSLCHMACRVGEGTGG 840
GTATSDGQAIAESVLEHFVSKVQCRG+FSTHYHRLAL Y+KDPRVSL HMACRVGEG G
Sbjct: 1142 GTATSDGQAIAESVLEHFVSKVQCRGVFSTHYHRLALAYYKDPRVSLYHMACRVGEGNNG 1201
Query: 841 LEEVTFLYRLTPGSCPKSYGVNVARLAGIPNCVLTEAAAKSREFEATYGMTGEESEDNLC 900
LEEVTFLYRLTPG+CPKSYGVNVARLAG+PNCVLTEAAAKS EFEATYGM GEESEDNLC
Sbjct: 1202 LEEVTFLYRLTPGTCPKSYGVNVARLAGLPNCVLTEAAAKSMEFEATYGMAGEESEDNLC 1261
Query: 901 NHAWVDNTVTLIQKLISLESTVKCNDETKKNSIGSLKQLQQQARILVQQG 951
NHAWVD+T+TLIQKLISLESTV+CNDET+KN IGSLKQLQQQARILVQQG
Sbjct: 1262 NHAWVDDTITLIQKLISLESTVRCNDETEKNGIGSLKQLQQQARILVQQG 1311
BLAST of Sed0020923 vs. ExPASy TrEMBL
Match:
A0A5A7TZD1 (DNA mismatch repair protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold427G00600 PE=3 SV=1)
HSP 1 Score: 1734.5 bits (4491), Expect = 0.0e+00
Identity = 876/949 (92.31%), Postives = 914/949 (96.31%), Query Frame = 0
Query: 1 MDKVLFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPEKNFSLNVEKLARKGYRV 60
MDKVLFFKMGKFYELFEMDAH+GAKELDLQYMKGEQPHCGFPE+NFSLNVEKLARKGYRV
Sbjct: 362 MDKVLFFKMGKFYELFEMDAHIGAKELDLQYMKGEQPHCGFPERNFSLNVEKLARKGYRV 421
Query: 61 LVIEQTETPEQLERRRKEKGSKDKVVKREICAVVTKGTLTEGEMLSLNPDASYLMSVTEK 120
LVIEQTETPEQLERRRKEKGSKDK +KREICAVVTKGTLTEGEMLSLNPDASYLM+VTEK
Sbjct: 422 LVIEQTETPEQLERRRKEKGSKDKALKREICAVVTKGTLTEGEMLSLNPDASYLMAVTEK 481
Query: 121 FHGLENQQTERILGVCLVDAATSRIILGQFGDDLECSALCSLLSELRPVEIVKPAKLLSP 180
FHGLENQQ ERILGVC+VD ATSR+ILGQFGDDLECSALC LLSELRPVEI+KPAKLLSP
Sbjct: 482 FHGLENQQAERILGVCVVDVATSRVILGQFGDDLECSALCCLLSELRPVEIIKPAKLLSP 541
Query: 181 ETERVLLTHTRNSLVNELVPLLEFWDAEKSVQEVKRLFKGIANRSVSGSSSEASLPNDVA 240
ETERVLLTHTRN LVNELVPLLEFW+AEK+VQEVKRLFKGIANRSVSGSSSEASL ND
Sbjct: 542 ETERVLLTHTRNPLVNELVPLLEFWNAEKTVQEVKRLFKGIANRSVSGSSSEASLLNDDT 601
Query: 241 PEEKDGLNYLPDVLSELVNARENGSWALSALGGILFYLKQAFLDETLLRFAKFELLPCSG 300
P E DGL++LP VLSELV A ENGSWALSALGGILFYLKQAFLDETLLRFAKFELLPCSG
Sbjct: 602 PGENDGLSFLPVVLSELVTAHENGSWALSALGGILFYLKQAFLDETLLRFAKFELLPCSG 661
Query: 301 FSDVISKPYMVLDAAALENLEIFENSKNGDSSGTLYSQLNHCVTAFGKRLLKTWLARPLY 360
FSDVISKPYMVLDAAALENLEIFENS+NGDSSGTLYSQLNHCVTAFGKRLLKTWLARPLY
Sbjct: 662 FSDVISKPYMVLDAAALENLEIFENSRNGDSSGTLYSQLNHCVTAFGKRLLKTWLARPLY 721
Query: 361 HVESIKARQGAVASLRGDNLSCSLEFRKALSKLPDMERLLARIFASSEANGRNAKNVVLY 420
VESIKARQGAVASLRGDNLS SLEFRKALSKLPDMERLLARIF++SEANGRNAKNVVLY
Sbjct: 722 DVESIKARQGAVASLRGDNLSFSLEFRKALSKLPDMERLLARIFSNSEANGRNAKNVVLY 781
Query: 421 EDAAKKQLQEFISALRGCELMLQACSSLRVILKNVESKRLDCLLTPGEGLPDLYSVLSHF 480
EDAAKKQLQEFISALRGCELMLQACSSL VIL +VES+RL+CLLTPGEGLPDL+SVLSHF
Sbjct: 782 EDAAKKQLQEFISALRGCELMLQACSSLHVILPSVESRRLNCLLTPGEGLPDLHSVLSHF 841
Query: 481 KDAFDWVEANSSGRIMPHEGVDVEHDSACEKIKEIQSSLAKHLKEQRKLLGDTSITYVTV 540
KDAFDWVEANSSGR++P EGVDVE+DSACEKIKEIQSSL KHLKEQRKLLGDTSITYVTV
Sbjct: 842 KDAFDWVEANSSGRVIPREGVDVEYDSACEKIKEIQSSLTKHLKEQRKLLGDTSITYVTV 901
Query: 541 GKETHLLEVPESLQGNIPRSYELRSSKKGFFRYWTPTIKSLLAELSLAESEKESSLKSIL 600
GKETHLLEVPESLQGNIP++YELRSSKKGFFRYWTP IK LL ELSLAESEKESSLKSIL
Sbjct: 902 GKETHLLEVPESLQGNIPQTYELRSSKKGFFRYWTPNIKKLLVELSLAESEKESSLKSIL 961
Query: 601 QRLIGKFCEYHLQWRQLVSAIAELDVLISLAIASDYYEGHACQPLFSKLQCQKKVPCFSA 660
QRLIGKFCE+HLQWRQLVSAIAELDVLISLAIASDYYEG+ CQPLFSK QCQ +VP F+A
Sbjct: 962 QRLIGKFCEHHLQWRQLVSAIAELDVLISLAIASDYYEGYTCQPLFSKSQCQSEVPHFTA 1021
Query: 661 KNLGHPTLRSDSLGEGTFVPNDVNIGGSGANFILLTGPNMGGKSTLLRQVCLSVILAQMG 720
KNLGHP LRSDSLGEGTFVPND+ IGGSGANFILLTGPNMGGKSTLLRQVCLS+ILAQ+G
Sbjct: 1022 KNLGHPILRSDSLGEGTFVPNDITIGGSGANFILLTGPNMGGKSTLLRQVCLSIILAQIG 1081
Query: 721 ADVPAESFELAPVDRIFVRMGAKDQIMSGQSTFLTELSETALMLSSATRNSLVILDELGR 780
ADVPAESFELAPVDRIFVRMGAKDQIMSGQSTFLTELSETALMLSSATRNSLVILDELGR
Sbjct: 1082 ADVPAESFELAPVDRIFVRMGAKDQIMSGQSTFLTELSETALMLSSATRNSLVILDELGR 1141
Query: 781 GTATSDGQAIAESVLEHFVSKVQCRGIFSTHYHRLALTYHKDPRVSLCHMACRVGEGTGG 840
GTATSDGQAIAESVLEHFVSKVQCRG+FSTHYHRLAL Y+KDPRVSL HMACRVGEG G
Sbjct: 1142 GTATSDGQAIAESVLEHFVSKVQCRGVFSTHYHRLALAYYKDPRVSLYHMACRVGEGNNG 1201
Query: 841 LEEVTFLYRLTPGSCPKSYGVNVARLAGIPNCVLTEAAAKSREFEATYGMTGEESEDNLC 900
LEEVTFLYRLTPG+CPKSYGVNVARLAG+PNCVLTEAAAKS EFEATYGM GEESEDNLC
Sbjct: 1202 LEEVTFLYRLTPGTCPKSYGVNVARLAGLPNCVLTEAAAKSMEFEATYGMAGEESEDNLC 1261
Query: 901 NHAWVDNTVTLIQKLISLESTVKCNDETKKNSIGSLKQLQQQARILVQQ 950
NHAWVD+T+TLIQKLISLESTV+CNDET+KN IGSLKQLQQQARILVQQ
Sbjct: 1262 NHAWVDDTITLIQKLISLESTVRCNDETEKNGIGSLKQLQQQARILVQQ 1310
BLAST of Sed0020923 vs. ExPASy TrEMBL
Match:
A0A6J1H7N2 (DNA mismatch repair protein OS=Cucurbita moschata OX=3662 GN=LOC111461234 PE=3 SV=1)
HSP 1 Score: 1728.8 bits (4476), Expect = 0.0e+00
Identity = 875/950 (92.11%), Postives = 912/950 (96.00%), Query Frame = 0
Query: 1 MDKVLFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPEKNFSLNVEKLARKGYRV 60
MDKVLFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPEKNFS+NVEKLARKGYRV
Sbjct: 359 MDKVLFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPEKNFSMNVEKLARKGYRV 418
Query: 61 LVIEQTETPEQLERRRKEKGSKDKVVKREICAVVTKGTLTEGEMLSLNPDASYLMSVTEK 120
LVIEQTETPEQLE+RRKEKGSKDKVVKREICAVVTKGTLTEGEMLSLNPDASYLM+VTEK
Sbjct: 419 LVIEQTETPEQLEKRRKEKGSKDKVVKREICAVVTKGTLTEGEMLSLNPDASYLMAVTEK 478
Query: 121 FHGLENQQTERILGVCLVDAATSRIILGQFGDDLECSALCSLLSELRPVEIVKPAKLLSP 180
FHGLENQ ERILGVC+VD ATSRIILGQFGDD ECSALC LLSELRPVEI+KP+KLLSP
Sbjct: 479 FHGLENQPAERILGVCVVDVATSRIILGQFGDDAECSALCCLLSELRPVEIIKPSKLLSP 538
Query: 181 ETERVLLTHTRNSLVNELVPLLEFWDAEKSVQEVKRLFKGIANRSVSGSSSEASLPNDVA 240
ETERVLLTHTRN LVNELVPLLEFWDAEKSV EVKRLFKGIANRS GSS+E SL ND
Sbjct: 539 ETERVLLTHTRNPLVNELVPLLEFWDAEKSVHEVKRLFKGIANRSFLGSSNEESLLNDDV 598
Query: 241 PEEKDGLNYLPDVLSELVNARENGSWALSALGGILFYLKQAFLDETLLRFAKFELLPCSG 300
P EKDGL YLPDVLSEL+NARENGSWALSALGGILFYLKQAFLDE LLRFAKFELLPCSG
Sbjct: 599 PGEKDGLGYLPDVLSELINARENGSWALSALGGILFYLKQAFLDEALLRFAKFELLPCSG 658
Query: 301 FSDVISKPYMVLDAAALENLEIFENSKNGDSSGTLYSQLNHCVTAFGKRLLKTWLARPLY 360
F+DVISKPYMVLDAAALENLEIFENS+NG SSGTLYSQLNHCVTAFGKRLLKTWLARPLY
Sbjct: 659 FNDVISKPYMVLDAAALENLEIFENSRNGGSSGTLYSQLNHCVTAFGKRLLKTWLARPLY 718
Query: 361 HVESIKARQGAVASLRGDNLSCSLEFRKALSKLPDMERLLARIFASSEANGRNAKNVVLY 420
HVESIKARQGAVASLRGDNLS SLEFRKALSKL DMERLLARIFASSEANGRNA NVVLY
Sbjct: 719 HVESIKARQGAVASLRGDNLSYSLEFRKALSKLTDMERLLARIFASSEANGRNATNVVLY 778
Query: 421 EDAAKKQLQEFISALRGCELMLQACSSLRVILKNVESKRLDCLLTPGEGLPDLYSVLSHF 480
EDAAK+QLQEFISALRGCELMLQACSSLRVIL+NVES+RLDCLLTPGEGLPDL SVLSHF
Sbjct: 779 EDAAKRQLQEFISALRGCELMLQACSSLRVILENVESRRLDCLLTPGEGLPDLQSVLSHF 838
Query: 481 KDAFDWVEANSSGRIMPHEGVDVEHDSACEKIKEIQSSLAKHLKEQRKLLGDTSITYVTV 540
KDAFDW EANSSGRI+PHEGVDVE+DSAC+KIKEIQS L KHLKEQRKLLGDTSITYVTV
Sbjct: 839 KDAFDWGEANSSGRIIPHEGVDVEYDSACKKIKEIQSDLTKHLKEQRKLLGDTSITYVTV 898
Query: 541 GKETHLLEVPESLQGNIPRSYELRSSKKGFFRYWTPTIKSLLAELSLAESEKESSLKSIL 600
GKETHLLEVPESLQG+IP++YELRSSKKGFFRYWTP IK LLAELSLAESEKESSLKSIL
Sbjct: 899 GKETHLLEVPESLQGSIPQNYELRSSKKGFFRYWTPNIKKLLAELSLAESEKESSLKSIL 958
Query: 601 QRLIGKFCEYHLQWRQLVSAIAELDVLISLAIASDYYEGHACQPLFSKLQCQKKVPCFSA 660
QRLIGKFCE+HLQWRQLVSA+AELDVLISLAIASDYYEG ACQPLFSK QCQK+VP FSA
Sbjct: 959 QRLIGKFCEHHLQWRQLVSAVAELDVLISLAIASDYYEGGACQPLFSKSQCQKEVPRFSA 1018
Query: 661 KNLGHPTLRSDSLGEGTFVPNDVNIGGSGANFILLTGPNMGGKSTLLRQVCLSVILAQMG 720
KNLGHP L+SDSLGEGTFVPND+NIGGS A+FILLTGPNMGGKSTLLRQVCLSV+LAQ+G
Sbjct: 1019 KNLGHPILKSDSLGEGTFVPNDINIGGSSASFILLTGPNMGGKSTLLRQVCLSVVLAQIG 1078
Query: 721 ADVPAESFELAPVDRIFVRMGAKDQIMSGQSTFLTELSETALMLSSATRNSLVILDELGR 780
ADVPAESFELAPVDRIFVRMGAKDQIMSGQSTFLTELSETALMLSSATRNSLVILDELGR
Sbjct: 1079 ADVPAESFELAPVDRIFVRMGAKDQIMSGQSTFLTELSETALMLSSATRNSLVILDELGR 1138
Query: 781 GTATSDGQAIAESVLEHFVSKVQCRGIFSTHYHRLALTYHKDPRVSLCHMACRVGEGTGG 840
GTATSDGQAIAESVLEHFVSKVQCRG+FSTHYHRLAL Y KDPRVSL HMACRVGEGTGG
Sbjct: 1139 GTATSDGQAIAESVLEHFVSKVQCRGVFSTHYHRLALAYCKDPRVSLYHMACRVGEGTGG 1198
Query: 841 LEEVTFLYRLTPGSCPKSYGVNVARLAGIPNCVLTEAAAKSREFEATYGMTGEESEDNLC 900
+EEVTFLYRLT G+CPKSYGVNVARLAG+PNCVLTEAAAKSREFEATYG+TGEESE+NLC
Sbjct: 1199 VEEVTFLYRLTSGTCPKSYGVNVARLAGLPNCVLTEAAAKSREFEATYGITGEESEENLC 1258
Query: 901 NHAWVDNTVTLIQKLISLESTVKCNDETKKNSIGSLKQLQQQARILVQQG 951
NH+WVD TVTLIQKLISLEST++CNDET+KN I SLKQLQQQARILVQQG
Sbjct: 1259 NHSWVDGTVTLIQKLISLESTLRCNDETEKNGISSLKQLQQQARILVQQG 1308
BLAST of Sed0020923 vs. ExPASy TrEMBL
Match:
A0A6J1KUJ2 (DNA mismatch repair protein OS=Cucurbita maxima OX=3661 GN=LOC111497744 PE=3 SV=1)
HSP 1 Score: 1718.7 bits (4450), Expect = 0.0e+00
Identity = 871/950 (91.68%), Postives = 908/950 (95.58%), Query Frame = 0
Query: 1 MDKVLFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPEKNFSLNVEKLARKGYRV 60
MDKVLFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPEKNFS+NVEKLARKGYRV
Sbjct: 355 MDKVLFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPEKNFSMNVEKLARKGYRV 414
Query: 61 LVIEQTETPEQLERRRKEKGSKDKVVKREICAVVTKGTLTEGEMLSLNPDASYLMSVTEK 120
LVIEQTETPEQLERRRKEKGSKDKVVKREICAVVTKGTLTEGEMLSLNPDASYLM+VTEK
Sbjct: 415 LVIEQTETPEQLERRRKEKGSKDKVVKREICAVVTKGTLTEGEMLSLNPDASYLMAVTEK 474
Query: 121 FHGLENQQTERILGVCLVDAATSRIILGQFGDDLECSALCSLLSELRPVEIVKPAKLLSP 180
FHGLE+Q ERILGVC+VD ATSRIILGQFGDD ECSALC LLSELRPVEI+KP+KLLSP
Sbjct: 475 FHGLESQSAERILGVCVVDVATSRIILGQFGDDAECSALCCLLSELRPVEIIKPSKLLSP 534
Query: 181 ETERVLLTHTRNSLVNELVPLLEFWDAEKSVQEVKRLFKGIANRSVSGSSSEASLPNDVA 240
ETERVLLTHTRN LVNELVPLLEFWDAEKSV EVKRLFKGIANRS GSS+E +L ND
Sbjct: 535 ETERVLLTHTRNPLVNELVPLLEFWDAEKSVHEVKRLFKGIANRSFPGSSTEENLLNDDV 594
Query: 241 PEEKDGLNYLPDVLSELVNARENGSWALSALGGILFYLKQAFLDETLLRFAKFELLPCSG 300
P EKDGL YLPDVLSEL+NA ENGSWALSALGGILFYLKQAFLDE LLRFAKFELLPCSG
Sbjct: 595 PGEKDGLGYLPDVLSELMNALENGSWALSALGGILFYLKQAFLDEALLRFAKFELLPCSG 654
Query: 301 FSDVISKPYMVLDAAALENLEIFENSKNGDSSGTLYSQLNHCVTAFGKRLLKTWLARPLY 360
F+DVISKPYMVLDAAALENLEIFENS+NG SSGTLYSQLNHCVTAFGKRLLKTWLARPLY
Sbjct: 655 FNDVISKPYMVLDAAALENLEIFENSRNGGSSGTLYSQLNHCVTAFGKRLLKTWLARPLY 714
Query: 361 HVESIKARQGAVASLRGDNLSCSLEFRKALSKLPDMERLLARIFASSEANGRNAKNVVLY 420
HVESIKARQGAVASLRGDNLS SLEFRKALSKL DMERLLARIFASSEANGRNA NVVLY
Sbjct: 715 HVESIKARQGAVASLRGDNLSYSLEFRKALSKLTDMERLLARIFASSEANGRNATNVVLY 774
Query: 421 EDAAKKQLQEFISALRGCELMLQACSSLRVILKNVESKRLDCLLTPGEGLPDLYSVLSHF 480
EDAAK+QLQEFISALRGCELMLQACSSLRVIL+NVES+RLDCLLTPGEGLPDL SVLSHF
Sbjct: 775 EDAAKRQLQEFISALRGCELMLQACSSLRVILENVESRRLDCLLTPGEGLPDLQSVLSHF 834
Query: 481 KDAFDWVEANSSGRIMPHEGVDVEHDSACEKIKEIQSSLAKHLKEQRKLLGDTSITYVTV 540
KDAFDW EANSSGRI+P EGVDVE+DSAC+KIKEIQS+L KHLKEQRKLLGDT ITYVTV
Sbjct: 835 KDAFDWGEANSSGRIIPREGVDVEYDSACKKIKEIQSNLTKHLKEQRKLLGDTLITYVTV 894
Query: 541 GKETHLLEVPESLQGNIPRSYELRSSKKGFFRYWTPTIKSLLAELSLAESEKESSLKSIL 600
GK+THLLEVPESLQG+IP++YELRSSKKGFFRYWTP IK LL ELSLAESEKESSLKSIL
Sbjct: 895 GKDTHLLEVPESLQGSIPQNYELRSSKKGFFRYWTPNIKKLLVELSLAESEKESSLKSIL 954
Query: 601 QRLIGKFCEYHLQWRQLVSAIAELDVLISLAIASDYYEGHACQPLFSKLQCQKKVPCFSA 660
QRLIGKFCE+HLQWRQLVSA+AELDVLISLAIASDYYEG CQPLFSK QCQK+VP FSA
Sbjct: 955 QRLIGKFCEHHLQWRQLVSAVAELDVLISLAIASDYYEGGVCQPLFSKSQCQKEVPRFSA 1014
Query: 661 KNLGHPTLRSDSLGEGTFVPNDVNIGGSGANFILLTGPNMGGKSTLLRQVCLSVILAQMG 720
KNLGHP LRSDSLGEGTFVPND+NIGGS A+FILLTGPNMGGKSTLLRQVCLSVILAQ+G
Sbjct: 1015 KNLGHPVLRSDSLGEGTFVPNDINIGGSSASFILLTGPNMGGKSTLLRQVCLSVILAQIG 1074
Query: 721 ADVPAESFELAPVDRIFVRMGAKDQIMSGQSTFLTELSETALMLSSATRNSLVILDELGR 780
ADVPAESFELAPVDRIFVRMGAKDQIMSGQSTFLTELSETALMLSSATRNSLVILDELGR
Sbjct: 1075 ADVPAESFELAPVDRIFVRMGAKDQIMSGQSTFLTELSETALMLSSATRNSLVILDELGR 1134
Query: 781 GTATSDGQAIAESVLEHFVSKVQCRGIFSTHYHRLALTYHKDPRVSLCHMACRVGEGTGG 840
GTATSDGQAIAESVLEHFVSKVQCRG+FSTHYHRLAL Y KDPRVSL HMACRVGEGTGG
Sbjct: 1135 GTATSDGQAIAESVLEHFVSKVQCRGVFSTHYHRLALAYCKDPRVSLYHMACRVGEGTGG 1194
Query: 841 LEEVTFLYRLTPGSCPKSYGVNVARLAGIPNCVLTEAAAKSREFEATYGMTGEESEDNLC 900
+EEVTFLYRLTPG+CPKSYGVNVARLAG+PNCVLTEAAAKSREFEATYG+TGEESE+NLC
Sbjct: 1195 VEEVTFLYRLTPGTCPKSYGVNVARLAGLPNCVLTEAAAKSREFEATYGITGEESEENLC 1254
Query: 901 NHAWVDNTVTLIQKLISLESTVKCNDETKKNSIGSLKQLQQQARILVQQG 951
NH+WVD TVTLIQKLISLEST +CNDET+KN I SLKQLQQQARILVQQG
Sbjct: 1255 NHSWVDGTVTLIQKLISLESTPRCNDETEKNGISSLKQLQQQARILVQQG 1304
BLAST of Sed0020923 vs. ExPASy TrEMBL
Match:
A0A0A0KB78 (DNA mismatch repair protein OS=Cucumis sativus OX=3659 GN=Csa_7G407640 PE=3 SV=1)
HSP 1 Score: 1717.6 bits (4447), Expect = 0.0e+00
Identity = 871/950 (91.68%), Postives = 910/950 (95.79%), Query Frame = 0
Query: 1 MDKVLFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPEKNFSLNVEKLARKGYRV 60
MDKVLFFKMGKFYELFEMDAH+GAKELDLQYMKG+QPHCGFPE+NFSLNVEKLARKGYRV
Sbjct: 359 MDKVLFFKMGKFYELFEMDAHIGAKELDLQYMKGDQPHCGFPERNFSLNVEKLARKGYRV 418
Query: 61 LVIEQTETPEQLERRRKEKGSKDKVVKREICAVVTKGTLTEGEMLSLNPDASYLMSVTEK 120
LVIEQTETPEQLERRRKEKGSKDKVVKREICAVVTKGTLTEGEMLSLNPDASYLM+VTE
Sbjct: 419 LVIEQTETPEQLERRRKEKGSKDKVVKREICAVVTKGTLTEGEMLSLNPDASYLMAVTEN 478
Query: 121 FHGLENQQTERILGVCLVDAATSRIILGQFGDDLECSALCSLLSELRPVEIVKPAKLLSP 180
F+GLENQQ ERILGVC+VD ATSR+ILGQFGDD ECSALC LLSELRPVEI+KPAKLLSP
Sbjct: 479 FYGLENQQ-ERILGVCVVDVATSRVILGQFGDDSECSALCCLLSELRPVEIIKPAKLLSP 538
Query: 181 ETERVLLTHTRNSLVNELVPLLEFWDAEKSVQEVKRLFKGIANRSVSGSSSEASLPNDVA 240
ETERVLLTHTRN LVNELVPLLEFWDAEK+VQEVKRLFKGIANRSVSGSSSEASL ND A
Sbjct: 539 ETERVLLTHTRNPLVNELVPLLEFWDAEKTVQEVKRLFKGIANRSVSGSSSEASLLNDNA 598
Query: 241 PEEKDGLNYLPDVLSELVNARENGSWALSALGGILFYLKQAFLDETLLRFAKFELLPCSG 300
E DGL+Y+PDVLSELV A ENGSWALSALGGILFYLKQAFLDETLLRFAKFELLPCSG
Sbjct: 599 ARENDGLSYMPDVLSELVTADENGSWALSALGGILFYLKQAFLDETLLRFAKFELLPCSG 658
Query: 301 FSDVISKPYMVLDAAALENLEIFENSKNGDSSGTLYSQLNHCVTAFGKRLLKTWLARPLY 360
FSDVISKPYMVLDAAALENLEIFENS+NGDSSGTLYSQLNHCVTAFGKRLLKTWLARPLY
Sbjct: 659 FSDVISKPYMVLDAAALENLEIFENSRNGDSSGTLYSQLNHCVTAFGKRLLKTWLARPLY 718
Query: 361 HVESIKARQGAVASLRGDNLSCSLEFRKALSKLPDMERLLARIFASSEANGRNAKNVVLY 420
HVESI+ARQGAVASLRGDNLS SLEFRKALSKLPDMERLLARIF++SEANGRNA NVVLY
Sbjct: 719 HVESIEARQGAVASLRGDNLSFSLEFRKALSKLPDMERLLARIFSNSEANGRNAINVVLY 778
Query: 421 EDAAKKQLQEFISALRGCELMLQACSSLRVILKNVESKRLDCLLTPGEGLPDLYSVLSHF 480
EDAAKKQLQEFISALRGCELMLQACSSLRVIL NV+S+RLDCLLTPGEGLPDL+SVLSHF
Sbjct: 779 EDAAKKQLQEFISALRGCELMLQACSSLRVILPNVKSRRLDCLLTPGEGLPDLHSVLSHF 838
Query: 481 KDAFDWVEANSSGRIMPHEGVDVEHDSACEKIKEIQSSLAKHLKEQRKLLGDTSITYVTV 540
KDAFDWVEANSSGR++P EGVDVE+DSACEKI+EIQSSL KHLKEQRKLLGDTSITYVTV
Sbjct: 839 KDAFDWVEANSSGRVIPREGVDVEYDSACEKIREIQSSLTKHLKEQRKLLGDTSITYVTV 898
Query: 541 GKETHLLEVPESLQGNIPRSYELRSSKKGFFRYWTPTIKSLLAELSLAESEKESSLKSIL 600
GKETHLLEVPESLQGNIP++YELRSSKKGFFRYWTP IK LLAELSLAESEKESSLKSIL
Sbjct: 899 GKETHLLEVPESLQGNIPQTYELRSSKKGFFRYWTPNIKKLLAELSLAESEKESSLKSIL 958
Query: 601 QRLIGKFCEYHLQWRQLVSAIAELDVLISLAIASDYYEGHACQPLFSKLQCQKKVPCFSA 660
QRLI KFCE+HLQWRQLVSAIAELDVLISLAIASDYYEG+ CQPLFSK QCQ +VP F+A
Sbjct: 959 QRLIRKFCEHHLQWRQLVSAIAELDVLISLAIASDYYEGYTCQPLFSKSQCQNEVPRFTA 1018
Query: 661 KNLGHPTLRSDSLGEGTFVPNDVNIGGSGANFILLTGPNMGGKSTLLRQVCLSVILAQMG 720
KNLGHP LRSDSLGEGTFVPND+ IGGSGANFILLTGPNMGGKSTLLRQVCLSVILAQ+G
Sbjct: 1019 KNLGHPILRSDSLGEGTFVPNDITIGGSGANFILLTGPNMGGKSTLLRQVCLSVILAQIG 1078
Query: 721 ADVPAESFELAPVDRIFVRMGAKDQIMSGQSTFLTELSETALMLSSATRNSLVILDELGR 780
ADVPAESFELAPVDRIFVRMGA+DQIMSGQSTFLTELSETALMLSSATRNS+VILDELGR
Sbjct: 1079 ADVPAESFELAPVDRIFVRMGARDQIMSGQSTFLTELSETALMLSSATRNSVVILDELGR 1138
Query: 781 GTATSDGQAIAESVLEHFVSKVQCRGIFSTHYHRLALTYHKDPRVSLCHMACRVGEGTGG 840
GTATSDGQAIAESVLEHFVSKVQCRG+FSTHYHRLAL YHKDPRVSL HMACRVGEG G
Sbjct: 1139 GTATSDGQAIAESVLEHFVSKVQCRGVFSTHYHRLALAYHKDPRVSLHHMACRVGEGNNG 1198
Query: 841 LEEVTFLYRLTPGSCPKSYGVNVARLAGIPNCVLTEAAAKSREFEATYGMTGEESEDNLC 900
LEEVTFLYRLTPG+CPKSYGVNVARLAG+PNCVLTEAAAKS EFE TYGM GEESE +LC
Sbjct: 1199 LEEVTFLYRLTPGTCPKSYGVNVARLAGLPNCVLTEAAAKSMEFEVTYGMAGEESEVDLC 1258
Query: 901 NHAWVDNTVTLIQKLISLESTVKCNDETKKNSIGSLKQLQQQARILVQQG 951
N WVD+T TLIQKLISLES V+CNDET+KN IGSLKQLQQQARILVQQG
Sbjct: 1259 NQTWVDDTTTLIQKLISLESAVRCNDETEKNGIGSLKQLQQQARILVQQG 1307
BLAST of Sed0020923 vs. TAIR 10
Match:
AT4G02070.1 (MUTS homolog 6 )
HSP 1 Score: 1253.8 bits (3243), Expect = 0.0e+00
Identity = 639/900 (71.00%), Postives = 743/900 (82.56%), Query Frame = 0
Query: 1 MDKVLFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPEKNFSLNVEKLARKGYRV 60
MDKV+FFKMGKFYELFEMDAHVGAKELD+QYMKGEQPHCGFPEKNFS+N+EKL RKGYRV
Sbjct: 394 MDKVVFFKMGKFYELFEMDAHVGAKELDIQYMKGEQPHCGFPEKNFSVNIEKLVRKGYRV 453
Query: 61 LVIEQTETPEQLERRRKEKGSKDKVVKREICAVVTKGTLTEGEMLSLNPDASYLMSVTEK 120
LV+EQTETP+QLE+RRKE GSKDKVVKRE+CAVVTKGTLT+GEML NPDASYLM++TE
Sbjct: 454 LVVEQTETPDQLEQRRKETGSKDKVVKREVCAVVTKGTLTDGEMLLTNPDASYLMALTEG 513
Query: 121 FHGLENQQTERILGVCLVDAATSRIILGQFGDDLECSALCSLLSELRPVEIVKPAKLLSP 180
L N E GVCLVD AT +IILGQF DD +CSAL LLSE+RPVEI+KPAK+LS
Sbjct: 514 GESLTNPTAEHNFGVCLVDVATQKIILGQFKDDQDCSALSCLLSEMRPVEIIKPAKVLSY 573
Query: 181 ETERVLLTHTRNSLVNELVPLLEFWDAEKSVQEVKRLFKGIANRSVSGSSSEASLPNDVA 240
TER ++ TRN LVN LVPL EFWD+EK++ EV ++K I + S SSE +
Sbjct: 574 ATERTIVRQTRNPLVNNLVPLSEFWDSEKTIYEVGIIYKRINCQPSSAYSSEGKILG--- 633
Query: 241 PEEKDGLNYLPDVLSELVNARENGSWALSALGGILFYLKQAFLDETLLRFAKFELLPCSG 300
DG ++LP +LSEL +NGS ALSALGG ++YL+QAFLDE+LLRFAKFE LP
Sbjct: 634 ----DGSSFLPKMLSELATEDKNGSLALSALGGAIYYLRQAFLDESLLRFAKFESLPYCD 693
Query: 301 FSDVISKPYMVLDAAALENLEIFENSKNGDSSGTLYSQLNHCVTAFGKRLLKTWLARPLY 360
FS+V K +MVLDAAALENLEIFENS+NG SGTLY+QLN C+TA GKRLLKTWLARPLY
Sbjct: 694 FSNVNEKQHMVLDAAALENLEIFENSRNGGYSGTLYAQLNQCITASGKRLLKTWLARPLY 753
Query: 361 HVESIKARQGAVASLRGDNLSCSLEFRKALSKLPDMERLLARIFASSEANGRNAKNVVLY 420
+ E IK RQ AVA LRG+NL SLEFRK+LS+LPDMERL+AR+F+S EA+GRN VVLY
Sbjct: 754 NTELIKERQDAVAILRGENLPYSLEFRKSLSRLPDMERLIARMFSSIEASGRNGDKVVLY 813
Query: 421 EDAAKKQLQEFISALRGCELMLQACSSLRVILKNVESKRLDCLLTPGEGLPDLYSVLSHF 480
ED AKKQ+QEFIS LRGCE M +ACSSLR ILK+ S+RL LLTPG+ LP++ S + +F
Sbjct: 814 EDTAKKQVQEFISTLRGCETMAEACSSLRAILKHDTSRRLLHLLTPGQSLPNISSSIKYF 873
Query: 481 KDAFDWVEANSSGRIMPHEGVDVEHDSACEKIKEIQSSLAKHLKEQRKLLGDTSITYVTV 540
KDAFDWVEA++SGR++PHEG D E+D AC+ ++E +SSL KHLKEQRKLLGD SI YVTV
Sbjct: 874 KDAFDWVEAHNSGRVIPHEGADEEYDCACKTVEEFESSLKKHLKEQRKLLGDASINYVTV 933
Query: 541 GKETHLLEVPESLQGNIPRSYELRSSKKGFFRYWTPTIKSLLAELSLAESEKESSLKSIL 600
GK+ +LLEVPESL G++P YEL SSKKG RYWTPTIK LL ELS A+SEKES+LKSI
Sbjct: 934 GKDEYLLEVPESLSGSVPHDYELCSSKKGVSRYWTPTIKKLLKELSQAKSEKESALKSIS 993
Query: 601 QRLIGKFCEYHLQWRQLVSAIAELDVLISLAIASDYYEGHACQPLFSKLQCQKKVPCFSA 660
QRLIG+FCE+ +WRQLVSA AELDVLISLA ASD YEG C+P+ S VP SA
Sbjct: 994 QRLIGRFCEHQEKWRQLVSATAELDVLISLAFASDSYEGVRCRPVISG-STSDGVPHLSA 1053
Query: 661 KNLGHPTLRSDSLGEGTFVPNDVNIGGS-GANFILLTGPNMGGKSTLLRQVCLSVILAQM 720
LGHP LR DSLG G+FVPN+V IGG+ A+FILLTGPNMGGKSTLLRQVCL+VILAQ+
Sbjct: 1054 TGLGHPVLRGDSLGRGSFVPNNVKIGGAEKASFILLTGPNMGGKSTLLRQVCLAVILAQI 1113
Query: 721 GADVPAESFELAPVDRIFVRMGAKDQIMSGQSTFLTELSETALMLSSATRNSLVILDELG 780
GADVPAE+FE++PVD+I VRMGAKD IM+GQSTFLTELSETA+ML+SATRNSLV+LDELG
Sbjct: 1114 GADVPAETFEVSPVDKICVRMGAKDHIMAGQSTFLTELSETAVMLTSATRNSLVVLDELG 1173
Query: 781 RGTATSDGQAIAESVLEHFVSKVQCRGIFSTHYHRLALTYHKDPRVSLCHMACRVGEGTG 840
RGTATSDGQAIAESVLEHF+ KVQCRG FSTHYHRL++ Y +P+VSLCHMAC++GEG G
Sbjct: 1174 RGTATSDGQAIAESVLEHFIEKVQCRGFFSTHYHRLSVDYQTNPKVSLCHMACQIGEGIG 1233
Query: 841 GLEEVTFLYRLTPGSCPKSYGVNVARLAGIPNCVLTEAAAKSREFEATYGMTGEESEDNL 900
G+EEVTFLYRLTPG+CPKSYGVNVARLAG+P+ VL A KS+EFEA YG +++ L
Sbjct: 1234 GVEEVTFLYRLTPGACPKSYGVNVARLAGLPDYVLQRAVIKSQEFEALYGKNHRKTDHKL 1285
BLAST of Sed0020923 vs. TAIR 10
Match:
AT4G02070.2 (MUTS homolog 6 )
HSP 1 Score: 1253.8 bits (3243), Expect = 0.0e+00
Identity = 639/900 (71.00%), Postives = 743/900 (82.56%), Query Frame = 0
Query: 1 MDKVLFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPEKNFSLNVEKLARKGYRV 60
MDKV+FFKMGKFYELFEMDAHVGAKELD+QYMKGEQPHCGFPEKNFS+N+EKL RKGYRV
Sbjct: 391 MDKVVFFKMGKFYELFEMDAHVGAKELDIQYMKGEQPHCGFPEKNFSVNIEKLVRKGYRV 450
Query: 61 LVIEQTETPEQLERRRKEKGSKDKVVKREICAVVTKGTLTEGEMLSLNPDASYLMSVTEK 120
LV+EQTETP+QLE+RRKE GSKDKVVKRE+CAVVTKGTLT+GEML NPDASYLM++TE
Sbjct: 451 LVVEQTETPDQLEQRRKETGSKDKVVKREVCAVVTKGTLTDGEMLLTNPDASYLMALTEG 510
Query: 121 FHGLENQQTERILGVCLVDAATSRIILGQFGDDLECSALCSLLSELRPVEIVKPAKLLSP 180
L N E GVCLVD AT +IILGQF DD +CSAL LLSE+RPVEI+KPAK+LS
Sbjct: 511 GESLTNPTAEHNFGVCLVDVATQKIILGQFKDDQDCSALSCLLSEMRPVEIIKPAKVLSY 570
Query: 181 ETERVLLTHTRNSLVNELVPLLEFWDAEKSVQEVKRLFKGIANRSVSGSSSEASLPNDVA 240
TER ++ TRN LVN LVPL EFWD+EK++ EV ++K I + S SSE +
Sbjct: 571 ATERTIVRQTRNPLVNNLVPLSEFWDSEKTIYEVGIIYKRINCQPSSAYSSEGKILG--- 630
Query: 241 PEEKDGLNYLPDVLSELVNARENGSWALSALGGILFYLKQAFLDETLLRFAKFELLPCSG 300
DG ++LP +LSEL +NGS ALSALGG ++YL+QAFLDE+LLRFAKFE LP
Sbjct: 631 ----DGSSFLPKMLSELATEDKNGSLALSALGGAIYYLRQAFLDESLLRFAKFESLPYCD 690
Query: 301 FSDVISKPYMVLDAAALENLEIFENSKNGDSSGTLYSQLNHCVTAFGKRLLKTWLARPLY 360
FS+V K +MVLDAAALENLEIFENS+NG SGTLY+QLN C+TA GKRLLKTWLARPLY
Sbjct: 691 FSNVNEKQHMVLDAAALENLEIFENSRNGGYSGTLYAQLNQCITASGKRLLKTWLARPLY 750
Query: 361 HVESIKARQGAVASLRGDNLSCSLEFRKALSKLPDMERLLARIFASSEANGRNAKNVVLY 420
+ E IK RQ AVA LRG+NL SLEFRK+LS+LPDMERL+AR+F+S EA+GRN VVLY
Sbjct: 751 NTELIKERQDAVAILRGENLPYSLEFRKSLSRLPDMERLIARMFSSIEASGRNGDKVVLY 810
Query: 421 EDAAKKQLQEFISALRGCELMLQACSSLRVILKNVESKRLDCLLTPGEGLPDLYSVLSHF 480
ED AKKQ+QEFIS LRGCE M +ACSSLR ILK+ S+RL LLTPG+ LP++ S + +F
Sbjct: 811 EDTAKKQVQEFISTLRGCETMAEACSSLRAILKHDTSRRLLHLLTPGQSLPNISSSIKYF 870
Query: 481 KDAFDWVEANSSGRIMPHEGVDVEHDSACEKIKEIQSSLAKHLKEQRKLLGDTSITYVTV 540
KDAFDWVEA++SGR++PHEG D E+D AC+ ++E +SSL KHLKEQRKLLGD SI YVTV
Sbjct: 871 KDAFDWVEAHNSGRVIPHEGADEEYDCACKTVEEFESSLKKHLKEQRKLLGDASINYVTV 930
Query: 541 GKETHLLEVPESLQGNIPRSYELRSSKKGFFRYWTPTIKSLLAELSLAESEKESSLKSIL 600
GK+ +LLEVPESL G++P YEL SSKKG RYWTPTIK LL ELS A+SEKES+LKSI
Sbjct: 931 GKDEYLLEVPESLSGSVPHDYELCSSKKGVSRYWTPTIKKLLKELSQAKSEKESALKSIS 990
Query: 601 QRLIGKFCEYHLQWRQLVSAIAELDVLISLAIASDYYEGHACQPLFSKLQCQKKVPCFSA 660
QRLIG+FCE+ +WRQLVSA AELDVLISLA ASD YEG C+P+ S VP SA
Sbjct: 991 QRLIGRFCEHQEKWRQLVSATAELDVLISLAFASDSYEGVRCRPVISG-STSDGVPHLSA 1050
Query: 661 KNLGHPTLRSDSLGEGTFVPNDVNIGGS-GANFILLTGPNMGGKSTLLRQVCLSVILAQM 720
LGHP LR DSLG G+FVPN+V IGG+ A+FILLTGPNMGGKSTLLRQVCL+VILAQ+
Sbjct: 1051 TGLGHPVLRGDSLGRGSFVPNNVKIGGAEKASFILLTGPNMGGKSTLLRQVCLAVILAQI 1110
Query: 721 GADVPAESFELAPVDRIFVRMGAKDQIMSGQSTFLTELSETALMLSSATRNSLVILDELG 780
GADVPAE+FE++PVD+I VRMGAKD IM+GQSTFLTELSETA+ML+SATRNSLV+LDELG
Sbjct: 1111 GADVPAETFEVSPVDKICVRMGAKDHIMAGQSTFLTELSETAVMLTSATRNSLVVLDELG 1170
Query: 781 RGTATSDGQAIAESVLEHFVSKVQCRGIFSTHYHRLALTYHKDPRVSLCHMACRVGEGTG 840
RGTATSDGQAIAESVLEHF+ KVQCRG FSTHYHRL++ Y +P+VSLCHMAC++GEG G
Sbjct: 1171 RGTATSDGQAIAESVLEHFIEKVQCRGFFSTHYHRLSVDYQTNPKVSLCHMACQIGEGIG 1230
Query: 841 GLEEVTFLYRLTPGSCPKSYGVNVARLAGIPNCVLTEAAAKSREFEATYGMTGEESEDNL 900
G+EEVTFLYRLTPG+CPKSYGVNVARLAG+P+ VL A KS+EFEA YG +++ L
Sbjct: 1231 GVEEVTFLYRLTPGACPKSYGVNVARLAGLPDYVLQRAVIKSQEFEALYGKNHRKTDHKL 1282
BLAST of Sed0020923 vs. TAIR 10
Match:
AT3G24495.1 (MUTS homolog 7 )
HSP 1 Score: 386.3 bits (991), Expect = 6.9e-107
Identity = 311/919 (33.84%), Postives = 446/919 (48.53%), Query Frame = 0
Query: 1 MDKVLFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHC---GFPEKNFSLNVEKLARKG 60
MD VLFFK+GKFYEL+E+DA +G KELD + C G E V+KL +G
Sbjct: 282 MDIVLFFKVGKFYELYELDAELGHKELDWKMTMSGVGKCRQVGISESGIDEAVQKLLARG 341
Query: 61 YRVLVIEQTETPEQLERRRKEKGSKDKVVKREICAVVTKGTLTEGEMLSLNPDASYLMSV 120
Y+V IEQ ET +Q + R + ++ R++ V+T T +EG ++ PDA +L+++
Sbjct: 342 YKVGRIEQLETSDQAKAR-----GANTIIPRKLVQVLTPSTASEG---NIGPDAVHLLAI 401
Query: 121 TEKFHGLENQQTERILGVCLVDAATSRIILGQFGDDLECSALCSLLSELRPVEIVKPAKL 180
E +E Q+ + G VD A R +G DD C+AL +LL ++ P E++ +K
Sbjct: 402 KE--IKMELQKCSTVYGFAFVDCAALRFWVGSISDDASCAALGALLMQVSPKEVLYDSKG 461
Query: 181 LSPETERVLLTHT-RNSLVNELVPLLEFWDAEKSVQEVKRLFKGIANRSVSGSSSEASLP 240
LS E ++ L +T S +L P+ + + V+ + + +N GSS +
Sbjct: 462 LSREAQKALRKYTLTGSTAVQLAPVPQVM-GDTDAAGVRNIIE--SNGYFKGSSESWNC- 521
Query: 241 NDVAPEEKDGLNYLPDVLSELVNARENGSWALSALGGILFYLKQAFLDETLLRFAKFELL 300
DGLN DV ALSALG ++ +L + L++ L ++
Sbjct: 522 ------AVDGLNEC-DV-------------ALSALGELINHLSRLKLEDVL---KHGDIF 581
Query: 301 PCSGFSDVISKPYMVLDAAALENLEIFENSKNGDSSGTLYSQLNHCVTAFGKRLLKTWLA 360
P + + + +D + NLEIF NS +G SGTLY L++CV+ GKRLL+ W+
Sbjct: 582 PYQ-----VYRGCLRIDGQTMVNLEIFNNSCDGGPSGTLYKYLDNCVSPTGKRLLRNWIC 641
Query: 361 RPLYHVESIKARQGAVASLRGDNLSCSLEFRKALSKLPDMERLLARIFASSEANGRNAKN 420
PL VESI R V ++ S + + L KLPD+ERLL RI +S ++
Sbjct: 642 HPLKDVESINKRLDVVEEFTANSESMQIT-GQYLHKLPDLERLLGRIKSSVRSSA----- 701
Query: 421 VVLYEDAAKKQLQEFISALRGCELMLQACSSLRVILKNVESKRLDCLLTPGEGLPDLYSV 480
+ AL G +++ Q + I+K S +D LL
Sbjct: 702 -------------SVLPALLGKKVLKQRVKAFGQIVKGFRS-GIDLLL------------ 761
Query: 481 LSHFKDAFDWVEANSSGRIMPHEGVDVEHDSACEKIKEIQSSLAKHLKEQRKLLGDTSIT 540
A +K + S L K K I
Sbjct: 762 -------------------------------ALQKESNMMSLLYKLCK--------LPIL 821
Query: 541 YVTVGKETHLLEVPESLQGNIPRSYELRSSKKGFFRYWTPTIKSLLAELSLAESEKESSL 600
G E L + ++ + P Y + AE
Sbjct: 822 VGKSGLELFLSQFEAAIDSDFP-------------NYQNQDVTDENAE------------ 881
Query: 601 KSILQRLIGKFCEYHLQWRQLVSAIAELDVLISLAIASDYYEGHACQPLF-----SKLQC 660
L LI F E QW +++ I+ LDVL S AIA+ G +P+ + Q
Sbjct: 882 --TLTILIELFIERATQWSEVIHTISCLDVLRSFAIAASLSAGSMARPVIFPESEATDQN 941
Query: 661 QK-KVPCFSAKNLGHPTLRSDSLGEGTF-VPNDVNIG----GSGA---NFILLTGPNMGG 720
QK K P + L HP + +G VPND+ +G SG+ +LLTGPNMGG
Sbjct: 942 QKTKGPILKIQGLWHPFAVA---ADGQLPVPNDILLGEARRSSGSIHPRSLLLTGPNMGG 1001
Query: 721 KSTLLRQVCLSVILAQMGADVPAESFELAPVDRIFVRMGAKDQIMSGQSTFLTELSETAL 780
KSTLLR CL+VI AQ+G VP ES E++ VD IF R+GA D+IM+G+STFL E +ETA
Sbjct: 1002 KSTLLRATCLAVIFAQLGCYVPCESCEISLVDTIFTRLGASDRIMTGESTFLVECTETAS 1057
Query: 781 MLSSATRNSLVILDELGRGTATSDGQAIAESVLEHFVSKVQCRGIFSTHYHRLALTYHKD 840
+L +AT++SLVILDELGRGT+T DG AIA SV H V KVQCR +F+THYH L +
Sbjct: 1062 VLQNATQDSLVILDELGRGTSTFDGYAIAYSVFRHLVEKVQCRMLFATHYHPLTKEFASH 1057
Query: 841 PRVSLCHMACRVG-----EGTGGLEEVTFLYRLTPGSCPKSYGVNVARLAGIPNCVLTEA 897
PRV+ HMAC + G +++ FLYRLT G+CP+SYG+ VA +AGIPN V+ A
Sbjct: 1122 PRVTSKHMACAFKSRSDYQPRGCDQDLVFLYRLTEGACPESYGLQVALMAGIPNQVVETA 1057
BLAST of Sed0020923 vs. TAIR 10
Match:
AT4G25540.1 (homolog of DNA mismatch repair protein MSH3 )
HSP 1 Score: 281.6 bits (719), Expect = 2.4e-75
Identity = 265/951 (27.87%), Postives = 430/951 (45.22%), Query Frame = 0
Query: 2 DKVLFFKMGKFYELFEMDAHVGAKELDL-QYMKGEQPHCGFPEKNFSLNVEKLARKGYRV 61
D VL ++G Y F DA + A+ L + +M P + +V +L GY++
Sbjct: 120 DVVLMVEVGYRYRFFGEDAEIAARVLGIYAHMDHNFMTASVPTFRLNFHVRRLVNAGYKI 179
Query: 62 LVIEQTETPEQLERRRKEKGSKDKVVKREICAVVTKGTLTEGEMLS--------LNPDAS 121
V++QTET G R + A+ TK TL E +S ++
Sbjct: 180 GVVKQTETAAIKSHGANRTGP----FFRGLSALYTKATLEAAEDISGGCGGEEGFGSQSN 239
Query: 122 YLMSVTEK-------FHGLENQQTERILGVCLVDAATSRIILGQFGDDLECSALCSLLSE 181
+L+ V ++ G+E R+ GV V+ +T ++ +F D+ S L +++
Sbjct: 240 FLVCVVDERVKSETLGCGIEMSFDVRV-GVVGVEISTGEVVYEEFNDNFMRSGLEAVILS 299
Query: 182 LRPVEIVKPAKLLSPETERVLLTHT-RNSLVNELVPLLEFWDAEKSVQEVKRLFKGIANR 241
L P E++ + LS +TE+ L+ H S V L+ + +V EV L +
Sbjct: 300 LSPAELLL-GQPLSQQTEKFLVAHAGPTSNVRVERASLDCFSNGNAVDEVISLCE----- 359
Query: 242 SVSGSSSEASLPNDVAPEEKDGLNYLPDVLSELVNARENGSWALSALGGILFYLKQAFLD 301
+S + E + EK G++ L + ++N + AL +LKQ +
Sbjct: 360 KISAGNLEDDKEMKLEAAEK-GMSCL--TVHTIMNMPH---LTVQALALTFCHLKQFGFE 419
Query: 302 ETLLRFAKFELLPCSGFSDVISKPYMVLDAAALENLEIFENSKNGDSSGTLYSQLNHCVT 361
L + A F L S M L A L+ LE+ +N+ +G SG+L+ +NH +T
Sbjct: 420 RILYQGASFRSLS--------SNTEMTLSANTLQQLEVVKNNSDGSESGSLFHNMNHTLT 479
Query: 362 AFGKRLLKTWLARPLYHVESIKARQGAVASL---RGDNLSCSL----------------E 421
+G RLL+ W+ PL I AR AV+ + G + S L E
Sbjct: 480 VYGSRLLRHWVTHPLCDRNLISARLDAVSEISACMGSHSSSQLSSELVEEGSERAIVSPE 539
Query: 422 F-------RKALSKLPDMERLLARIF----------ASSEA---NGRNAKNVVLYEDAAK 481
F A+S+ D++R + RIF A EA G+ + + + +D+
Sbjct: 540 FYLVLSSVLTAMSRSSDIQRGITRIFHRTAKATEFIAVMEAILLAGKQIQRLGIKQDSEM 599
Query: 482 KQLQEFISALRGCELMLQACSSLRVILKNVESKRLDCLLTPGEGLPDLYSVLSHFKDAFD 541
+ +Q ++ SS V++ N K L L DL +L D F
Sbjct: 600 RSMQSATVRSTLLRKLISVISS-PVVVDNA-GKLLSALNKEAAVRGDLLDILITSSDQFP 659
Query: 542 WVEANSSGRIMPHEGVDVEHDSACEKIKEIQSSLAKHLKEQRKLLGDTSITYVTVGKETH 601
E A + + I+ L + RK L ++ ++ V TH
Sbjct: 660 ------------------ELAEARQAVLVIREKLDSSIASFRKKLAIRNLEFLQVSGITH 719
Query: 602 LLEVPESLQGNIPRSYELRSSKKGFFRYWTPTIKSLLAELSLAESEKESSLKSILQRLIG 661
L+E+P + +P ++ +S K RY P I + L EL+LA ++ +
Sbjct: 720 LIELP--VDSKVPMNWVKVNSTKKTIRYHPPEIVAGLDELALATEHLAIVNRASWDSFLK 779
Query: 662 KFCEYHLQWRQLVSAIAELDVLISLAIAS---DYYEGH---ACQPLFSKLQCQKKVPCFS 721
F Y+ ++ V A+A LD L SL+ S +Y C+P+ +Q +
Sbjct: 780 SFSRYYTDFKAAVQALAALDCLHSLSTLSRNKNYVRPEFVDDCEPVEINIQSGR------ 839
Query: 722 AKNLGHPTLRSDSLGEGTFVPNDVNIGGSGANFILLTGPNMGGKSTLLRQVCLSVILAQM 781
HP L +++ + FVPND + G ++TGPNMGGKS +RQV L I+AQ+
Sbjct: 840 -----HPVL--ETILQDNFVPNDTILHAEGEYCQIITGPNMGGKSCYIRQVALISIMAQV 899
Query: 782 GADVPAESFELAPVDRIFVRMGAKDQIMSGQSTFLTELSETALMLSSATRNSLVILDELG 841
G+ VPA +L +D +F RMGA D I G+STFL ELSE + ++ + + SLVILDELG
Sbjct: 900 GSFVPASFAKLHVLDGVFTRMGASDSIQHGRSTFLEELSEASHIIRTCSSRSLVILDELG 959
Query: 842 RGTATSDGQAIAESVLEHFVSKVQCRGIFSTHYHRLALTYHKDP----RVSLCHMACRVG 887
RGT+T DG AIA + L+H +++ +C +F THY +A + P + ++ +
Sbjct: 960 RGTSTHDGVAIAYATLQHLLAEKRCLVLFVTHYPEIAEISNGFPGSVGTYHVSYLTLQKD 1010
BLAST of Sed0020923 vs. TAIR 10
Match:
AT3G18524.1 (MUTS homolog 2 )
HSP 1 Score: 199.9 bits (507), Expect = 9.1e-51
Identity = 156/602 (25.91%), Postives = 273/602 (45.35%), Query Frame = 0
Query: 309 YMVLDAAALENLEIFENSKNGDSSGTLYSQLNH-CVTAFGKRLLKTWLARPLYHVESIKA 368
+M LD+AA+ L + E+ + + + +L+ +N C GKRLL WL +PL + IK
Sbjct: 293 FMRLDSAAMRALNVMESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLVDLNEIKT 352
Query: 369 RQGAVASLRGDNLSCSLEFRKALSKLPDMERLLARIFASSEANGRNAKNVVLYEDAAKKQ 428
R V + + R+ L ++ D+ERLL + G + LY+ +
Sbjct: 353 RLDIVQCF-VEEAGLRQDLRQHLKRISDVERLLRSL---ERRRGGLQHIIKLYQSTIR-- 412
Query: 429 LQEFISALRGCELMLQACSSLRVILKNVESKRLDCLLTPGEGLPDLYSVLSHFKDAFDWV 488
FI M Q ++ K+L+ L S H D V
Sbjct: 413 -LPFIKT-----AMQQYTGEFASLISERYLKKLEAL-----------SDQDHLGKFIDLV 472
Query: 489 EAN------SSGRIMPHEGVDVEHDSACEKIKEIQSSLAKHLKEQRK-------LLGDTS 548
E + +G M + +D+ +K+ + L + + E K L D +
Sbjct: 473 ECSVDLDQLENGEYM----ISSSYDTKLASLKDQKELLEQQIHELHKKTAIELDLQVDKA 532
Query: 549 ITYVTVGKETHLLEVPE----SLQGNIPRSYELRSSKKGFFRYWTPTIKSLLAELSLAES 608
+ + H+ + + ++ + + + ++K ++ +K L +
Sbjct: 533 LKLDKAAQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQSVVD 592
Query: 609 EKESSLKSILQRLIGKFCEYHLQWRQLVSAIAELDVLISLAIASDYYEGHACQPLFSKLQ 668
+ S K ++ R++ + + L ++E+DVL+S A + C+P +
Sbjct: 593 DYRSCQKELVDRVVETVTSFSEVFEDLAGLLSEMDVLLSFADLAASCPTPYCRPEITSSD 652
Query: 669 CQKKVPCFSAKNLGHPTLRSDSLGEGTFVPNDVNIGGSGANFILLTGPNMGGKSTLLRQV 728
V + HP + + F+PND + + F ++TGPNMGGKST +RQV
Sbjct: 653 AGDIV----LEGSRHPCVEAQDW--VNFIPNDCRLMRGKSWFQIVTGPNMGGKSTFIRQV 712
Query: 729 CLSVILAQMGADVPAESFELAPVDRIFVRMGAKDQIMSGQSTFLTELSETALMLSSATRN 788
+ V++AQ+G+ VP + ++ D IF R+GA D + G STF+ E+ ETA +L A+
Sbjct: 713 GVIVLMAQVGSFVPCDKASISIRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGASDK 772
Query: 789 SLVILDELGRGTATSDGQAIAESVLEHFVSKVQCRGIFSTHYHRLALTYHKDPRVS---- 848
SL+I+DELGRGT+T DG +A ++ EH V + +F+TH+H L + VS
Sbjct: 773 SLIIIDELGRGTSTYDGFGLAWAICEHLVQVKRAPTLFATHFHELTALAQANSEVSGNTV 832
Query: 849 ---LCHMACRVGEGTGGLEEVTFLYRLTPGSCPKSYGVNVARLAGIPNCVLTEAAAKSRE 886
H++ + + ++T LY++ PG+C +S+G++VA A P V+ A K+ E
Sbjct: 833 GVANFHVSAHIDTES---RKLTMLYKVEPGACDQSFGIHVAEFANFPESVVALAREKAAE 858
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038899669.1 | 0.0e+00 | 92.74 | DNA mismatch repair protein MSH6 isoform X1 [Benincasa hispida] | [more] |
XP_038899670.1 | 0.0e+00 | 92.74 | DNA mismatch repair protein MSH6 isoform X2 [Benincasa hispida] | [more] |
XP_008451484.1 | 0.0e+00 | 92.53 | PREDICTED: DNA mismatch repair protein MSH6 [Cucumis melo] | [more] |
KAA0046691.1 | 0.0e+00 | 92.31 | DNA mismatch repair protein MSH6 [Cucumis melo var. makuwa] | [more] |
XP_022960522.1 | 0.0e+00 | 92.11 | DNA mismatch repair protein MSH6 [Cucurbita moschata] | [more] |
Match Name | E-value | Identity | Description | |
O04716 | 0.0e+00 | 71.00 | DNA mismatch repair protein MSH6 OS=Arabidopsis thaliana OX=3702 GN=MSH6 PE=1 SV... | [more] |
P54276 | 3.0e-171 | 41.77 | DNA mismatch repair protein Msh6 OS=Mus musculus OX=10090 GN=Msh6 PE=1 SV=3 | [more] |
E1BYJ2 | 1.9e-170 | 39.63 | DNA mismatch repair protein Msh6 OS=Gallus gallus OX=9031 GN=MSH6 PE=3 SV=2 | [more] |
P52701 | 4.4e-167 | 40.17 | DNA mismatch repair protein Msh6 OS=Homo sapiens OX=9606 GN=MSH6 PE=1 SV=2 | [more] |
Q9VUM0 | 3.6e-145 | 36.70 | Probable DNA mismatch repair protein Msh6 OS=Drosophila melanogaster OX=7227 GN=... | [more] |
Match Name | E-value | Identity | Description | |
A0A1S3BQZ5 | 0.0e+00 | 92.53 | DNA mismatch repair protein OS=Cucumis melo OX=3656 GN=LOC103492760 PE=3 SV=1 | [more] |
A0A5A7TZD1 | 0.0e+00 | 92.31 | DNA mismatch repair protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf... | [more] |
A0A6J1H7N2 | 0.0e+00 | 92.11 | DNA mismatch repair protein OS=Cucurbita moschata OX=3662 GN=LOC111461234 PE=3 S... | [more] |
A0A6J1KUJ2 | 0.0e+00 | 91.68 | DNA mismatch repair protein OS=Cucurbita maxima OX=3661 GN=LOC111497744 PE=3 SV=... | [more] |
A0A0A0KB78 | 0.0e+00 | 91.68 | DNA mismatch repair protein OS=Cucumis sativus OX=3659 GN=Csa_7G407640 PE=3 SV=1 | [more] |