Sed0020917 (gene) Chayote v1

Overview


Name	Sed0020917
Type	gene
Organism	Sechium edule (Chayote v1)
Description	F-box domain-containing protein
Location	LG01: 3107233 .. 3109113 (-)
RNA-Seq Expression	Sed0020917
Synteny	Sed0020917

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATCAATCTCGCTTCCATTACGCATTCCCATTTATATCTTTCCCTTTCCCTCAAATCCCTAATCTCAAAATCACCCTTTTTTAATCTTCTCCATTTCTGTGTATTCTTCTCCATTTCATTTCTAGGGTTTACAAACCCTTTTTCTCTAATGGGTCAGTTTTATTCCTCTGCTAGAACCTCTCTACAGCTCAATTACTATCAAAATCGGCCACTGGGTTGTCTAATTACTGGCCTTTCTTCCCCTTTGCCTCTTGAATCGCCGAAAAAAAACGATGGGGTTTTGTTAGATTGTGATGATTTTACTTATTCTCTTCCAGATGAATGTTTGGCCTCTGTTTTCCGGTTCCTCAACTCCGGCGACCGGAAAAGTTGTTCGTTGGTTTGTAAGCGGTGGTTTCAGGTAGAGGGTCAGAGCCGCCACCGTCTTTCCCTCAACGCTCAGGATGAGATTCTCCCTTTTCTTCCTTCTCTTTTTACTCGATTCGACTCTTTGAAGAAGCTTTCTCTTCGATGTAACAGGAAAGTTTCACGAATCAACGACGATTCCCTTGTTCTGGTCTCGATCCGTTGCCGGAGTCTGACCCGAATCAAGCTCTCGGGCCGATTTCAACTCACGGATGAAGGTATTGCTAGTTTTGCATCTAATTGTAAGACCCTCAAGAAATTCTCTTGTAGTTCGTGTGTTTTGGGGGCTAATTCAATTAATGCCCTTCTCAAGTATTGTAACTCTCTTGAGGAGCTCTCCTTGAAGAGCCTCCGTAGCGTCGTTGCCGGTACCGAGCCGATTGTGCCTGGTGCGGCGTCTCTGAAATCGATTGTGTTGAAGGAGCTTATTGATGGGTTGAGCTTGATTCCTCTTATAATGGGGTCTAGAAATTTGAAAGCTCTTAAGATCATTCGCTGCCAGGGGAATTGGGATGATCTGTTTAAGTTGTTTGGTTGTAGAAATGGTATGGCTAGTTTGGTTGAAGTTCATATTGAGAGGATTCAGGTTAGTGATGTAGGGCTTTCAGCCATTTCTAACTGCTTGAATTTAGAGATATTGCATTTGATTAAAGTTTGGGAATGTACAAATGTTGGGCTTGCTTGTATTGCTGAACATTGTAAAAGGATAAGGAAGCTTCATATTGATGGGTGGAGAACTGATAGAATAGGAGATGAGGGGCTAATGGCTATAGCTAAACAATGCATTGATTTACAAGAACTTGTTCTTATTGCGGTGAATCCAACTTGTTTGTCTCTATCTTTGTTGGGTAAAAACTGTTTGAATTTGGAGAGATTGGCTATTTGTGGGAGTAGAGTTGGGGATGAAGAGATCGCTTGCATTGCAGCCAAATGCAAATCGTTGAAGAAACTTTGCATAAAAGGGTGTCCAATTTCAAACATTGGGATTGAATCATTAGCTTGGGGGTGTCCCAATTTGGCTAAGATTAAGGTGAAGAAGTGCAGAGGGGTGACTGGTGAGATCAAGGAGTGGCTTGTGGAGAAGAGGCGATCATTGAGTTTGAATTGGGATGTTGAGGAGATTGATCACTTGGATGCAAGTTGTAGTGATAACGGGAGCGCTCGAGAGGTTGTTGTCGCGGAATCGAGACCGGTGGAAACCAGGGTCGTAGCTGCGGTTAACGCGGGCAGGCGGCTGACGATTTTGAAGGGGACGTTGGGAGTTCTGGTAGGGAGGAGTTTGATGGCTTGTACAATTGGGAGGTGGTCTAATTGTACTGGTTCAAGTAGCAGTTTATGAAATGGTATTTAATTTAATAGAACAGAAATGTTGTATGATTTTGTAATTGATTTTTTTTTTAATTTTATAATTTAAGATCAACATCTTGGCCTGGAAAATGTGTAAACATGATATGAGAAAGAATACATGTGTCTGGG

mRNA sequence

CATCAATCTCGCTTCCATTACGCATTCCCATTTATATCTTTCCCTTTCCCTCAAATCCCTAATCTCAAAATCACCCTTTTTTAATCTTCTCCATTTCTGTGTATTCTTCTCCATTTCATTTCTAGGGTTTACAAACCCTTTTTCTCTAATGGGTCAGTTTTATTCCTCTGCTAGAACCTCTCTACAGCTCAATTACTATCAAAATCGGCCACTGGGTTGTCTAATTACTGGCCTTTCTTCCCCTTTGCCTCTTGAATCGCCGAAAAAAAACGATGGGGTTTTGTTAGATTGTGATGATTTTACTTATTCTCTTCCAGATGAATGTTTGGCCTCTGTTTTCCGGTTCCTCAACTCCGGCGACCGGAAAAGTTGTTCGTTGGTTTGTAAGCGGTGGTTTCAGGTAGAGGGTCAGAGCCGCCACCGTCTTTCCCTCAACGCTCAGGATGAGATTCTCCCTTTTCTTCCTTCTCTTTTTACTCGATTCGACTCTTTGAAGAAGCTTTCTCTTCGATGTAACAGGAAAGTTTCACGAATCAACGACGATTCCCTTGTTCTGGTCTCGATCCGTTGCCGGAGTCTGACCCGAATCAAGCTCTCGGGCCGATTTCAACTCACGGATGAAGGTATTGCTAGTTTTGCATCTAATTGTAAGACCCTCAAGAAATTCTCTTGTAGTTCGTGTGTTTTGGGGGCTAATTCAATTAATGCCCTTCTCAAGTATTGTAACTCTCTTGAGGAGCTCTCCTTGAAGAGCCTCCGTAGCGTCGTTGCCGGTACCGAGCCGATTGTGCCTGGTGCGGCGTCTCTGAAATCGATTGTGTTGAAGGAGCTTATTGATGGGTTGAGCTTGATTCCTCTTATAATGGGGTCTAGAAATTTGAAAGCTCTTAAGATCATTCGCTGCCAGGGGAATTGGGATGATCTGTTTAAGTTGTTTGGTTGTAGAAATGGTATGGCTAGTTTGGTTGAAGTTCATATTGAGAGGATTCAGGTTAGTGATGTAGGGCTTTCAGCCATTTCTAACTGCTTGAATTTAGAGATATTGCATTTGATTAAAGTTTGGGAATGTACAAATGTTGGGCTTGCTTGTATTGCTGAACATTGTAAAAGGATAAGGAAGCTTCATATTGATGGGTGGAGAACTGATAGAATAGGAGATGAGGGGCTAATGGCTATAGCTAAACAATGCATTGATTTACAAGAACTTGTTCTTATTGCGGTGAATCCAACTTGTTTGTCTCTATCTTTGTTGGGTAAAAACTGTTTGAATTTGGAGAGATTGGCTATTTGTGGGAGTAGAGTTGGGGATGAAGAGATCGCTTGCATTGCAGCCAAATGCAAATCGTTGAAGAAACTTTGCATAAAAGGGTGTCCAATTTCAAACATTGGGATTGAATCATTAGCTTGGGGGTGTCCCAATTTGGCTAAGATTAAGGTGAAGAAGTGCAGAGGGGTGACTGGTGAGATCAAGGAGTGGCTTGTGGAGAAGAGGCGATCATTGAGTTTGAATTGGGATGTTGAGGAGATTGATCACTTGGATGCAAGTTGTAGTGATAACGGGAGCGCTCGAGAGGTTGTTGTCGCGGAATCGAGACCGGTGGAAACCAGGGTCGTAGCTGCGGTTAACGCGGGCAGGCGGCTGACGATTTTGAAGGGGACGTTGGGAGTTCTGGTAGGGAGGAGTTTGATGGCTTGTACAATTGGGAGGTGGTCTAATTGTACTGGTTCAAGTAGCAGTTTATGAAATGGTATTTAATTTAATAGAACAGAAATGTTGTATGATTTTGTAATTGATTTTTTTTTTAATTTTATAATTTAAGATCAACATCTTGGCCTGGAAAATGTGTAAACATGATATGAGAAAGAATACATGTGTCTGGG

Coding sequence (CDS)

ATGGGTCAGTTTTATTCCTCTGCTAGAACCTCTCTACAGCTCAATTACTATCAAAATCGGCCACTGGGTTGTCTAATTACTGGCCTTTCTTCCCCTTTGCCTCTTGAATCGCCGAAAAAAAACGATGGGGTTTTGTTAGATTGTGATGATTTTACTTATTCTCTTCCAGATGAATGTTTGGCCTCTGTTTTCCGGTTCCTCAACTCCGGCGACCGGAAAAGTTGTTCGTTGGTTTGTAAGCGGTGGTTTCAGGTAGAGGGTCAGAGCCGCCACCGTCTTTCCCTCAACGCTCAGGATGAGATTCTCCCTTTTCTTCCTTCTCTTTTTACTCGATTCGACTCTTTGAAGAAGCTTTCTCTTCGATGTAACAGGAAAGTTTCACGAATCAACGACGATTCCCTTGTTCTGGTCTCGATCCGTTGCCGGAGTCTGACCCGAATCAAGCTCTCGGGCCGATTTCAACTCACGGATGAAGGTATTGCTAGTTTTGCATCTAATTGTAAGACCCTCAAGAAATTCTCTTGTAGTTCGTGTGTTTTGGGGGCTAATTCAATTAATGCCCTTCTCAAGTATTGTAACTCTCTTGAGGAGCTCTCCTTGAAGAGCCTCCGTAGCGTCGTTGCCGGTACCGAGCCGATTGTGCCTGGTGCGGCGTCTCTGAAATCGATTGTGTTGAAGGAGCTTATTGATGGGTTGAGCTTGATTCCTCTTATAATGGGGTCTAGAAATTTGAAAGCTCTTAAGATCATTCGCTGCCAGGGGAATTGGGATGATCTGTTTAAGTTGTTTGGTTGTAGAAATGGTATGGCTAGTTTGGTTGAAGTTCATATTGAGAGGATTCAGGTTAGTGATGTAGGGCTTTCAGCCATTTCTAACTGCTTGAATTTAGAGATATTGCATTTGATTAAAGTTTGGGAATGTACAAATGTTGGGCTTGCTTGTATTGCTGAACATTGTAAAAGGATAAGGAAGCTTCATATTGATGGGTGGAGAACTGATAGAATAGGAGATGAGGGGCTAATGGCTATAGCTAAACAATGCATTGATTTACAAGAACTTGTTCTTATTGCGGTGAATCCAACTTGTTTGTCTCTATCTTTGTTGGGTAAAAACTGTTTGAATTTGGAGAGATTGGCTATTTGTGGGAGTAGAGTTGGGGATGAAGAGATCGCTTGCATTGCAGCCAAATGCAAATCGTTGAAGAAACTTTGCATAAAAGGGTGTCCAATTTCAAACATTGGGATTGAATCATTAGCTTGGGGGTGTCCCAATTTGGCTAAGATTAAGGTGAAGAAGTGCAGAGGGGTGACTGGTGAGATCAAGGAGTGGCTTGTGGAGAAGAGGCGATCATTGAGTTTGAATTGGGATGTTGAGGAGATTGATCACTTGGATGCAAGTTGTAGTGATAACGGGAGCGCTCGAGAGGTTGTTGTCGCGGAATCGAGACCGGTGGAAACCAGGGTCGTAGCTGCGGTTAACGCGGGCAGGCGGCTGACGATTTTGAAGGGGACGTTGGGAGTTCTGGTAGGGAGGAGTTTGATGGCTTGTACAATTGGGAGGTGGTCTAATTGTACTGGTTCAAGTAGCAGTTTATGA

Protein sequence

MGQFYSSARTSLQLNYYQNRPLGCLITGLSSPLPLESPKKNDGVLLDCDDFTYSLPDECLASVFRFLNSGDRKSCSLVCKRWFQVEGQSRHRLSLNAQDEILPFLPSLFTRFDSLKKLSLRCNRKVSRINDDSLVLVSIRCRSLTRIKLSGRFQLTDEGIASFASNCKTLKKFSCSSCVLGANSINALLKYCNSLEELSLKSLRSVVAGTEPIVPGAASLKSIVLKELIDGLSLIPLIMGSRNLKALKIIRCQGNWDDLFKLFGCRNGMASLVEVHIERIQVSDVGLSAISNCLNLEILHLIKVWECTNVGLACIAEHCKRIRKLHIDGWRTDRIGDEGLMAIAKQCIDLQELVLIAVNPTCLSLSLLGKNCLNLERLAICGSRVGDEEIACIAAKCKSLKKLCIKGCPISNIGIESLAWGCPNLAKIKVKKCRGVTGEIKEWLVEKRRSLSLNWDVEEIDHLDASCSDNGSAREVVVAESRPVETRVVAAVNAGRRLTILKGTLGVLVGRSLMACTIGRWSNCTGSSSSL

Homology

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BLAST of Sed0020917 vs. NCBI nr
Match: XP_038901763.1 (F-box protein SKIP2-like [Benincasa hispida])

HSP 1 Score: 880.9 bits (2275), Expect = 5.3e-252
Identity = 443/533 (83.11%), Postives = 479/533 (89.87%), Query Frame = 0


Query: 1   MGQFYSSARTSLQLNYYQNRPLGCLITGLSSPLPLESPKKNDGVLLDCDDFTYSLPDECL 60
           MGQFYSSA TS +LNY Q  P G  I G SSP+ L S ++ND  LLD +DFT+SLPDECL
Sbjct: 1   MGQFYSSAGTSPELNYLQQWPPGSQIGGRSSPMALPSTEQNDEGLLDLEDFTFSLPDECL 60

Query: 61  ASVFRFLNSGDRKSCSLVCKRWFQVEGQSRHRLSLNAQDEILPFLPSLFTRFDSLKKLSL 120
           AS+FRFLNSGDRKSCSLVCKRWFQVEGQSRHRLSLNAQDEILPFLPSLF RFDS+KKLSL
Sbjct: 61  ASIFRFLNSGDRKSCSLVCKRWFQVEGQSRHRLSLNAQDEILPFLPSLFARFDSVKKLSL 120

Query: 121 RCNRKVSRINDDSLVLVSIRCRSLTRIKLSGRFQLTDEGIASFASNCKTLKKFSCSSCVL 180
           RCNRK+S IND++L+LVSIRCR+LTRIKLSGRFQLTD GIA+FASNCKTLKKFSCSSC L
Sbjct: 121 RCNRKISGINDNALILVSIRCRNLTRIKLSGRFQLTDMGIATFASNCKTLKKFSCSSCAL 180

Query: 181 GANSINALLKYCNSLEELSLKSLRSVVAGTEPIVPG--AASLKSIVLKELIDGLSLIPLI 240
           GANSINALLK+C++LEELSLK LR V+AGTEPIVPG  AASLKSI+LK+L+DGLSLIPLI
Sbjct: 181 GANSINALLKHCSTLEELSLKGLRGVIAGTEPIVPGAAAASLKSILLKDLVDGLSLIPLI 240

Query: 241 MGSRNLKALKIIRCQGNWDDLFKLFGCRNGMASLVEVHIERIQVSDVGLSAISNCLNLEI 300
           MGS+NLKALKIIRCQGNWDDLF+LFG  N MASL+EVHIERIQVSD G+SAISNCLNLEI
Sbjct: 241 MGSKNLKALKIIRCQGNWDDLFQLFGHGNAMASLIEVHIERIQVSDCGVSAISNCLNLEI 300

Query: 301 LHLIKVWECTNVGLACIAEHCKRIRKLHIDGWRTDRIGDEGLMAIAKQCIDLQELVLIAV 360
           LHLIKVW+C+N GLACIAEHCK+IRKLHIDGWR +RIGDEGLMAIAKQC+DLQELVLI V
Sbjct: 301 LHLIKVWDCSNFGLACIAEHCKKIRKLHIDGWRINRIGDEGLMAIAKQCLDLQELVLIGV 360

Query: 361 NPTCLSLSLLGKNCLNLERLAICGSRVGDEEIACIAAKCKSLKKLCIKGCPISNIGIESL 420
           NPTCLSLSLL  NC+NLERLA+CGSRVGDEEIACIA KCKSLKKLCIKGCPISN+GIESL
Sbjct: 361 NPTCLSLSLLASNCVNLERLALCGSRVGDEEIACIAEKCKSLKKLCIKGCPISNVGIESL 420

Query: 421 AWGCPNLAKIKVKKCRGVTGEIKEWLVEKRRSLSLNWDVEEIDHLDASCSDNGSAREVVV 480
           AWGCPNLAKIKVKKCRGVTGEIKEWLVEKR SLS+NWDVEEIDHLDAS SD GSAREV V
Sbjct: 421 AWGCPNLAKIKVKKCRGVTGEIKEWLVEKRTSLSVNWDVEEIDHLDASSSDTGSAREVAV 480

Query: 481 AESRPVETRVVAAVNAGRRLTILKGTLGVLVGRSLMACTIGRWSNCTGSSSSL 532
            E R +ET V A V    RLTILK TLGVL GRSLMACT GRWSN   SSSS+
Sbjct: 481 LEPRLMETGVEAPVAGDGRLTILKTTLGVLAGRSLMACTFGRWSNSPDSSSSI 533

[Close]

BLAST of Sed0020917 vs. NCBI nr
Match: XP_008462840.1 (PREDICTED: F-box protein SKIP2 [Cucumis melo] >KAA0066413.1 F-box protein SKIP2 [Cucumis melo var. makuwa] >TYK00871.1 F-box protein SKIP2 [Cucumis melo var. makuwa])

HSP 1 Score: 866.7 bits (2238), Expect = 1.0e-247
Identity = 440/532 (82.71%), Postives = 472/532 (88.72%), Query Frame = 0


Query: 1   MGQFYSSARTSLQLNYYQNRPLGCLITGLSSPLPLESPKKNDGVLLDCDDFTYSLPDECL 60
           MGQFYSSA TS  LN  Q  P G  I G SSPL L S ++ND  LLD  DFT+SLPDECL
Sbjct: 1   MGQFYSSAGTSPDLNCLQRWPPGSQIGGFSSPLALPSTEQNDEGLLDFVDFTFSLPDECL 60

Query: 61  ASVFRFLNSGDRKSCSLVCKRWFQVEGQSRHRLSLNAQDEILPFLPSLFTRFDSLKKLSL 120
           AS+FRFLNSGDRK CSLVCKRWFQVEGQSRHRLSLNAQDEILPFLPSLFTRFDS+KKLSL
Sbjct: 61  ASIFRFLNSGDRKICSLVCKRWFQVEGQSRHRLSLNAQDEILPFLPSLFTRFDSVKKLSL 120

Query: 121 RCNRKVSRINDDSLVLVSIRCRSLTRIKLSGRFQLTDEGIASFASNCKTLKKFSCSSCVL 180
           RCNRK+SRINDD+L LVSIRCR+LTRIKLSGRFQLTD GIA+FASNCKTLKKFSCSSC L
Sbjct: 121 RCNRKISRINDDALSLVSIRCRNLTRIKLSGRFQLTDMGIAAFASNCKTLKKFSCSSCTL 180

Query: 181 GANSINALLKYCNSLEELSLKSLRSVVAGTEPIVPG--AASLKSIVLKELIDGLSLIPLI 240
           G NSINALLK+C++LEELSLK LR V+AG EPIVPG  AASL+SI+LK+L DGLSLIPLI
Sbjct: 181 GGNSINALLKHCSTLEELSLKGLRGVIAGNEPIVPGAAAASLRSILLKDLADGLSLIPLI 240

Query: 241 MGSRNLKALKIIRCQGNWDDLFKLFGCRNGMASLVEVHIERIQVSDVGLSAISNCLNLEI 300
           MGS+NLKALKIIRCQGNWDDLF+LFG  N MASL EVHIERIQVSD G+SAISNCL+LEI
Sbjct: 241 MGSKNLKALKIIRCQGNWDDLFQLFGNGNAMASLTEVHIERIQVSDCGVSAISNCLDLEI 300

Query: 301 LHLIKVWECTNVGLACIAEHCKRIRKLHIDGWRTDRIGDEGLMAIAKQCIDLQELVLIAV 360
           LHLIKVW+C+N GLA IAEHCK+IRKLHIDGWR +RIGDEGLMAIAKQC+DLQELVLI V
Sbjct: 301 LHLIKVWDCSNFGLARIAEHCKKIRKLHIDGWRINRIGDEGLMAIAKQCLDLQELVLIGV 360

Query: 361 NPTCLSLSLLGKNCLNLERLAICGSRVGDEEIACIAAKCKSLKKLCIKGCPISNIGIESL 420
           NPTCLSLSLL  NC+NLERLA+CGSRVGDEEIACIAAKCKSLKKLCIKGCPISNIGIESL
Sbjct: 361 NPTCLSLSLLASNCVNLERLALCGSRVGDEEIACIAAKCKSLKKLCIKGCPISNIGIESL 420

Query: 421 AWGCPNLAKIKVKKCRGVTGEIKEWLVEKRRSLSLNWDVEEIDHLDASCSDNGSAREVVV 480
           AWGCPNLAKIKVKKC+GVTGEIKEWLVEKR SLS+NWDVEEIDHLDAS SD GSAREV +
Sbjct: 421 AWGCPNLAKIKVKKCKGVTGEIKEWLVEKRTSLSVNWDVEEIDHLDASSSDAGSAREVAI 480

Query: 481 AESRPVETRVVAAVNAGRRLTILKGTLGVLVGRSLMACTIGRWSNCTGSSSS 531
            E RP+ET V A V    RLTILK TLG+L GRSLMACT GRWSN T  SSS
Sbjct: 481 LEPRPMETGVEAPVAGDGRLTILKTTLGLLAGRSLMACTFGRWSNTTPDSSS 532

[Close]

BLAST of Sed0020917 vs. NCBI nr
Match: XP_004151915.1 (F-box protein SKIP2 [Cucumis sativus] >KGN63314.1 hypothetical protein Csa_022431 [Cucumis sativus])

HSP 1 Score: 860.9 bits (2223), Expect = 5.7e-246
Identity = 435/525 (82.86%), Postives = 471/525 (89.71%), Query Frame = 0


Query: 1   MGQFYSSARTSLQLNYYQNRPLGCLITGLSSPLPLESPKKNDGVLLDCDDFTYSLPDECL 60
           MGQFYSSA TS  LN  Q  P G  I G SSPL L S ++ND  LLD  DFT+SLPDECL
Sbjct: 1   MGQFYSSAGTSPDLNCLQQWPPGSQIGGFSSPLALPSTEQNDEGLLDFVDFTFSLPDECL 60

Query: 61  ASVFRFLNSGDRKSCSLVCKRWFQVEGQSRHRLSLNAQDEILPFLPSLFTRFDSLKKLSL 120
           AS+FRFLNSGDRKSCSLVCKRWFQVEGQSRHRLSLNAQDEILPFLPSLFTRFDS+KKLSL
Sbjct: 61  ASIFRFLNSGDRKSCSLVCKRWFQVEGQSRHRLSLNAQDEILPFLPSLFTRFDSVKKLSL 120

Query: 121 RCNRKVSRINDDSLVLVSIRCRSLTRIKLSGRFQLTDEGIASFASNCKTLKKFSCSSCVL 180
           RCNRK+SRINDD+L+LVSIRCR+LTRIKLSGRFQLTD GIA+FASNCKTLKKFSCS+C L
Sbjct: 121 RCNRKISRINDDALILVSIRCRNLTRIKLSGRFQLTDLGIAAFASNCKTLKKFSCSTCAL 180

Query: 181 GANSINALLKYCNSLEELSLKSLRSVVAGTEPIVPGAA--SLKSIVLKELIDGLSLIPLI 240
           G NSINALLK+C++LEELSLK LR V+AGTEPIVPGAA  SLKSI+LK+L+DGLSLIPLI
Sbjct: 181 GGNSINALLKHCSTLEELSLKGLRGVIAGTEPIVPGAAATSLKSILLKDLVDGLSLIPLI 240

Query: 241 MGSRNLKALKIIRCQGNWDDLFKLFGCRNGMASLVEVHIERIQVSDVGLSAISNCLNLEI 300
           MGS+NLKALKIIRCQGNWDDLF+LFG  N MASL+EVHIERIQVSD G+SAISNCL+LEI
Sbjct: 241 MGSKNLKALKIIRCQGNWDDLFQLFGHGNAMASLIEVHIERIQVSDCGVSAISNCLDLEI 300

Query: 301 LHLIKVWECTNVGLACIAEHCKRIRKLHIDGWRTDRIGDEGLMAIAKQCIDLQELVLIAV 360
           LHLIKVW+C+N GLA IAE+CK+IRKLHIDGWR +RIGDEGLMAIAKQC+DLQELVLI V
Sbjct: 301 LHLIKVWDCSNFGLARIAEYCKKIRKLHIDGWRINRIGDEGLMAIAKQCVDLQELVLIGV 360

Query: 361 NPTCLSLSLLGKNCLNLERLAICGSRVGDEEIACIAAKCKSLKKLCIKGCPISNIGIESL 420
           NPTCLSLSLL  NC+NLERLA+CGSRVGDEEIACIAAKCKSLKKLCIKGCPISNIGIESL
Sbjct: 361 NPTCLSLSLLASNCVNLERLALCGSRVGDEEIACIAAKCKSLKKLCIKGCPISNIGIESL 420

Query: 421 AWGCPNLAKIKVKKCRGVTGEIKEWLVEKRRSLSLNWDVEEIDHLDASCSDNGSAREVVV 480
           AWGCPNLAKIKVKKC+GVTGEIKEWLVEKR SLS+NWDVEEIDHLDAS SD GSA EV V
Sbjct: 421 AWGCPNLAKIKVKKCKGVTGEIKEWLVEKRTSLSVNWDVEEIDHLDASSSDAGSAGEVAV 480

Query: 481 AESRPVETRVVAAVNAGRRLTILKGTLGVLVGRSLMACTIGRWSN 524
            E R +ET V A V    RLTILK TLG+L GRSLMACT GRWS+
Sbjct: 481 LEPRLMETGVGAPVAGDGRLTILKTTLGLLAGRSLMACTFGRWSS 525

[Close]

BLAST of Sed0020917 vs. NCBI nr
Match: XP_022986496.1 (F-box protein SKIP2-like [Cucurbita maxima])

HSP 1 Score: 840.5 bits (2170), Expect = 8.0e-240
Identity = 429/532 (80.64%), Postives = 467/532 (87.78%), Query Frame = 0


Query: 1   MGQFYSSARTSLQLNYYQNRPLGCLITGLSSPLPLESPKKNDGVLLDCDDFTYSLPDECL 60
           MGQFYSS  TSL L+ +Q  P G L+  LSS  PL  P  ++G LL+  DFT+ LPDECL
Sbjct: 1   MGQFYSSPETSLDLHDHQQWPPGSLVGALSSS-PLVLPSTDEG-LLNFVDFTFPLPDECL 60

Query: 61  ASVFRFLNSGDRKSCSLVCKRWFQVEGQSRHRLSLNAQDEILPFLPSLFTRFDSLKKLSL 120
           AS+FRFLNSGDRKSCSLVCKRWFQVE +SRHRLSLNAQDEILPFLPSLF RFDS+KKLSL
Sbjct: 61  ASIFRFLNSGDRKSCSLVCKRWFQVESESRHRLSLNAQDEILPFLPSLFARFDSVKKLSL 120

Query: 121 RCNRKVSRINDDSLVLVSIRCRSLTRIKLSGRFQLTDEGIASFASNCKTLKKFSCSSCVL 180
           RCNRK+SRINDD+L+LVSIRCRSLTRIKLSGRFQLTD GIA+FASNCKTLKKFSCSSC L
Sbjct: 121 RCNRKISRINDDALILVSIRCRSLTRIKLSGRFQLTDMGIATFASNCKTLKKFSCSSCAL 180

Query: 181 GANSINALLKYCNSLEELSLKSLRSVVAGTEPIVPG--AASLKSIVLKELIDGLSLIPLI 240
           GANSINALLK  ++LEELSLK LR V+AGTEPIVPG  AASLKSI+LK+L+DGLSL PLI
Sbjct: 181 GANSINALLKNSSTLEELSLKGLRGVIAGTEPIVPGVAAASLKSILLKDLVDGLSLTPLI 240

Query: 241 MGSRNLKALKIIRCQGNWDDLFKLFGCRNGMASLVEVHIERIQVSDVGLSAISNCLNLEI 300
           MGS+NLKALKIIRCQGNWD+LF+ FG  N MASL+EVHIERIQVSD G+SAISNCLNLEI
Sbjct: 241 MGSKNLKALKIIRCQGNWDELFQFFGHGNSMASLIEVHIERIQVSDCGVSAISNCLNLEI 300

Query: 301 LHLIKVWECTNVGLACIAEHCKRIRKLHIDGWRTDRIGDEGLMAIAKQCIDLQELVLIAV 360
           LHLIKVW+C+N GLACIAEHCKR+RKLHIDGWR +RIGDEGL+AIAKQC+DLQELVLI V
Sbjct: 301 LHLIKVWDCSNFGLACIAEHCKRLRKLHIDGWRINRIGDEGLIAIAKQCLDLQELVLIGV 360

Query: 361 NPTCLSLSLLGKNCLNLERLAICGSRVGDEEIACIAAKCKSLKKLCIKGCPISNIGIESL 420
           NPTCLSLS+L  NC+NLERLA+CGSRVGDEEIACIAAKCKSLKKLCIKGCPISNIGIESL
Sbjct: 361 NPTCLSLSMLASNCVNLERLALCGSRVGDEEIACIAAKCKSLKKLCIKGCPISNIGIESL 420

Query: 421 AWGCPNLAKIKVKKCRGVTGEIKEWLVEKRRSLSLNWDVEEIDHLDASCSDNGSAREVVV 480
           AWGCPNLAKIKVKKCRGVTGEIKEWLVEKR SLS+NWDVEEIDHLDAS SD GS +EV V
Sbjct: 421 AWGCPNLAKIKVKKCRGVTGEIKEWLVEKRTSLSVNWDVEEIDHLDASSSDAGSGQEVAV 480

Query: 481 AESRPVETRVVAAVNAGRRLTILKGTLGVLVGRSLMACTIGRWSNCTGSSSS 531
            E+R VET   A V   R LTILK TL  L GRSLMACT GRW N   SS+S
Sbjct: 481 LETRLVETGGEAPVVGDRWLTILKTTLSGLSGRSLMACTFGRWPNSPNSSNS 530

[Close]

BLAST of Sed0020917 vs. NCBI nr
Match: XP_022944421.1 (F-box protein SKIP2-like [Cucurbita moschata])

HSP 1 Score: 838.6 bits (2165), Expect = 3.0e-239
Identity = 430/532 (80.83%), Postives = 465/532 (87.41%), Query Frame = 0


Query: 1   MGQFYSSARTSLQLNYYQNRPLGCLITGLSSPLPLESPKKNDGVLLDCDDFTYSLPDECL 60
           MGQFYSS  TSLQL  +Q  P G  +  LSS  PL  P  ++G LL+  DFT+ LPDECL
Sbjct: 1   MGQFYSSPETSLQLRDHQQWPPGSQVGALSSS-PLVLPSMDEG-LLNFVDFTFPLPDECL 60

Query: 61  ASVFRFLNSGDRKSCSLVCKRWFQVEGQSRHRLSLNAQDEILPFLPSLFTRFDSLKKLSL 120
           AS+FRFLNSGDRKSCSLVCKRWFQVEG+SRHRLSLNAQDEILPFLPSLF RFDS+KKLSL
Sbjct: 61  ASIFRFLNSGDRKSCSLVCKRWFQVEGESRHRLSLNAQDEILPFLPSLFARFDSVKKLSL 120

Query: 121 RCNRKVSRINDDSLVLVSIRCRSLTRIKLSGRFQLTDEGIASFASNCKTLKKFSCSSCVL 180
           RCNRK+SRINDD+L+LVSIRCRSLTRIKLSGRFQLTD GIA+FASNCKTLKKFSCSSC L
Sbjct: 121 RCNRKISRINDDALILVSIRCRSLTRIKLSGRFQLTDMGIATFASNCKTLKKFSCSSCAL 180

Query: 181 GANSINALLKYCNSLEELSLKSLRSVVAGTEPIVPG--AASLKSIVLKELIDGLSLIPLI 240
           GANSINALLK  ++LEELSLK LR V+AGTEPIVPG  AASLKSI+LK+L+DGLSL PLI
Sbjct: 181 GANSINALLKNSSTLEELSLKGLRGVIAGTEPIVPGVAAASLKSILLKDLVDGLSLTPLI 240

Query: 241 MGSRNLKALKIIRCQGNWDDLFKLFGCRNGMASLVEVHIERIQVSDVGLSAISNCLNLEI 300
           MGS+NLKALKIIRCQGNWD+LF+ FG  N MASL+EVHIERIQVSD G+SAISNCLNLEI
Sbjct: 241 MGSKNLKALKIIRCQGNWDELFQFFGHGNAMASLIEVHIERIQVSDCGVSAISNCLNLEI 300

Query: 301 LHLIKVWECTNVGLACIAEHCKRIRKLHIDGWRTDRIGDEGLMAIAKQCIDLQELVLIAV 360
           LHLIKVW+C+N GLA IAEHCKR+RKLHIDGWR +RIGDEGL+AIAKQC+DLQELVLI V
Sbjct: 301 LHLIKVWDCSNFGLASIAEHCKRLRKLHIDGWRINRIGDEGLIAIAKQCLDLQELVLIGV 360

Query: 361 NPTCLSLSLLGKNCLNLERLAICGSRVGDEEIACIAAKCKSLKKLCIKGCPISNIGIESL 420
           NPTCLSLSLL  NC+NLERLA+CGSRVGDEEIACIAAKCKSLKKLCIKGCPISNIGIESL
Sbjct: 361 NPTCLSLSLLASNCVNLERLALCGSRVGDEEIACIAAKCKSLKKLCIKGCPISNIGIESL 420

Query: 421 AWGCPNLAKIKVKKCRGVTGEIKEWLVEKRRSLSLNWDVEEIDHLDASCSDNGSAREVVV 480
           AWGCPNLAKIKVKKCRGVTGEIKEWLVEKR SLS+NWDVEEIDHLDAS SD GS +EV V
Sbjct: 421 AWGCPNLAKIKVKKCRGVTGEIKEWLVEKRTSLSVNWDVEEIDHLDASSSDAGSGQEVAV 480

Query: 481 AESRPVETRVVAAVNAGRRLTILKGTLGVLVGRSLMACTIGRWSNCTGSSSS 531
            E+R VET   A V   R LTILK TL  L GRSLMACT GRW N    SSS
Sbjct: 481 PETRLVETGGEAPVVGDRWLTILKTTLSGLSGRSLMACTFGRWPNSPNGSSS 530

[Close]

BLAST of Sed0020917 vs. ExPASy Swiss-Prot
Match: Q9FE83 (F-box protein SKIP2 OS=Arabidopsis thaliana OX=3702 GN=SKIP2 PE=1 SV=1)

HSP 1 Score: 516.9 bits (1330), Expect = 2.7e-145
Identity = 268/492 (54.47%), Postives = 354/492 (71.95%), Query Frame = 0


Query: 50  DFTYSLPDECLASVFRFLNSGDRKSCSLVCKRWFQVEGQSRHRLSLNAQDEILPFLPSLF 109
           DFT  LPDECLA VF+FL +GDRK CSLVCKRW  V+GQSRHRLSL+A+DEI  FL S+F
Sbjct: 41  DFTGDLPDECLAHVFQFLGAGDRKRCSLVCKRWLLVDGQSRHRLSLDAKDEISSFLTSMF 100

Query: 110 TRFDSLKKLSLRCNRKVSRINDDSLVLVSIRCRSLTRIKLSGRFQLTDEGIASFASNCKT 169
            RFDS+ KL+LRC+RK   ++D++L ++S+RC +LTR+KL G  ++TD G+  FA NCK 
Sbjct: 101 NRFDSVTKLALRCDRKSVSLSDEALAMISVRCLNLTRVKLRGCREITDLGMEDFAKNCKN 160

Query: 170 LKKFSCSSCVLGANSINALLKYCNSLEELSLKSLRSVVAGTE----PIVPGAASLKSIVL 229
           LKK S  SC  GA  +NA+L++C  LEELS+K LR +    E    P    ++SL+SI L
Sbjct: 161 LKKLSVGSCNFGAKGVNAMLEHCKLLEELSVKRLRGIHEAAELIHLPDDASSSSLRSICL 220

Query: 230 KELIDGLSLIPLIMGSRNLKALKIIRCQGNWDDLFKLFGCRNGMASLVEVHIERIQVSDV 289
           KEL++G    PL+  +R LK LKIIRC G+WD + ++    NG +SL E+H+ER+QVSD+
Sbjct: 221 KELVNGQVFEPLLATTRTLKTLKIIRCLGDWDKVLQMIA--NGKSSLSEIHLERLQVSDI 280

Query: 290 GLSAISNCLNLEILHLIKVWECTNVGLACIAEHCKRIRKLHIDGWRTDRIGDEGLMAIAK 349
           GLSAIS C N+E LH++K  EC+N GL  +AE CK +RKLHIDGWRT+RIGDEGL+++AK
Sbjct: 281 GLSAISKCSNVETLHIVKTPECSNFGLIYVAERCKLLRKLHIDGWRTNRIGDEGLLSVAK 340

Query: 350 QCIDLQELVLIAVNPTCLSLSLLGKNCLNLERLAICGS-RVGDEEIACIAAKCKSLKKLC 409
            C++LQELVLI VN T +SL+ +  NC  LERLA+CGS  +GD EIACIA KC +L+K C
Sbjct: 341 HCLNLQELVLIGVNATHMSLAAIASNCEKLERLALCGSGTIGDTEIACIARKCGALRKFC 400

Query: 410 IKGCPISNIGIESLAWGCPNLAKIKVKKCRGVTGEIKEWLVEKRRSLSLNWDVEEIDHLD 469
           IKGCP+S+ GIE+LA GCPNL K+KVKKC+ VTGEI +WL E+RR+L ++ D +E    +
Sbjct: 401 IKGCPVSDRGIEALAVGCPNLVKLKVKKCKVVTGEIGDWLREQRRTLVVSMDGDE---TE 460

Query: 470 ASCSDNGSAREVVVAESRPVET-RVVAAVNA-----GRRLTILKGTLGVLVGRSLMACTI 529
           A    +G   E VV E R  +   +VA + +     G RL +++  LG L GR+L+ CT 
Sbjct: 461 AVVVVDGEV-ETVVEEPRVAQAGGIVAEIGSSNGGGGSRLAMIRSKLGFLAGRNLVTCTF 520

Query: 530 GRWSNCTGSSSS 531
            RWS+   +SSS
Sbjct: 521 RRWSHNDNASSS 526

[Close]

BLAST of Sed0020917 vs. ExPASy Swiss-Prot
Match: Q9SN10 (F-box/LRR-repeat protein 16 OS=Arabidopsis thaliana OX=3702 GN=FBL16 PE=2 SV=1)

HSP 1 Score: 506.9 bits (1304), Expect = 2.8e-142
Identity = 261/499 (52.30%), Postives = 356/499 (71.34%), Query Frame = 0


Query: 46  LDCD---------DFTYSLPDECLASVFRFLNSGDRKSCSLVCKRWFQVEGQSRHRLSLN 105
           LDC+         DFT +LPD+CLA +F+FL++GDRK CSLV KRW  V+GQ+RHRLSL+
Sbjct: 26  LDCESIGFEDGDYDFTANLPDDCLAHIFQFLSAGDRKRCSLVSKRWLLVDGQNRHRLSLD 85

Query: 106 AQDEILPFLPSLFTRFDSLKKLSLRCNRKVSRINDDSLVLVSIRCRSLTRIKLSGRFQLT 165
           A+ EILPFLP +F RFDS+ KL+LRC+R+   ++D++L +VSIRC +L R+KL G  ++T
Sbjct: 86  AKSEILPFLPCIFNRFDSVTKLALRCDRRSFSLSDEALFIVSIRCSNLIRVKLRGCREIT 145

Query: 166 DEGIASFASNCKTLKKFSCSSCVLGANSINALLKYCNSLEELSLKSLRSVVAGTEPI-VP 225
           D G+ SFA NCK+L+K SC SC  GA  INA+L++C  LEELSLK +R +    EPI + 
Sbjct: 146 DLGMESFARNCKSLRKLSCGSCTFGAKGINAMLEHCKVLEELSLKRIRGLHELAEPIKLS 205

Query: 226 GAASLKSIVLKELIDGLSLIPLIMGSRNLKALKIIRCQGNWDDLFKLFGCRNGMASLVEV 285
            +ASL+S+ LKEL++G  +   ++ +R LK +KIIRC GNWD +F++ G  NG +SL E+
Sbjct: 206 LSASLRSVFLKELVNG-QVFGSLVATRTLKKVKIIRCLGNWDRVFEMNG--NGNSSLTEI 265

Query: 286 HIERIQVSDVGLSAISNCLNLEILHLIKVWECTNVGLACIAEHCKRIRKLHIDGWRTDRI 345
            +ER+QV+D+GL  IS C NLE LH++K  +C+N+GLA + E CK +RKLHIDGWR  RI
Sbjct: 266 RLERLQVTDIGLFGISKCSNLETLHIVKTPDCSNLGLASVVERCKLLRKLHIDGWRVKRI 325

Query: 346 GDEGLMAIAKQCIDLQELVLIAVNPTCLSLSLLGKNCLNLERLAICGS-RVGDEEIACIA 405
           GD+GLM++AK C++LQELVLI V+ T +SLS +  NC  LERLA+CGS  +GD EI CIA
Sbjct: 326 GDQGLMSVAKHCLNLQELVLIGVDATYMSLSAIASNCKKLERLALCGSGTIGDAEIGCIA 385

Query: 406 AKCKSLKKLCIKGCPISNIGIESLAWGCPNLAKIKVKKCRGVTGEIKEWLVEKRRSLSLN 465
            KC +L+K CIKGC IS++G+++LA GCP L K+KVKKC  VTGE++EWL E+R +L ++
Sbjct: 386 EKCVTLRKFCIKGCLISDVGVQALALGCPKLVKLKVKKCSLVTGEVREWLRERRMTLVVS 445

Query: 466 WDVEEIDHLDASCSDNGSAREVVVAESRP--VETRVVAAVNAGRR--LTILKGTLGVLVG 525
            D +E + +      +    E VV E  P  ++      V  G R  L ILK  LG+L G
Sbjct: 446 MDDDETNGVGLVDGGDQRVLETVVEEEAPPVIDGDGGLGVAGGGRLGLAILKTKLGLLAG 505

Query: 526 RSLMACTIGRWSNCTGSSS 530
           R+L+ACT+ RWS    +SS
Sbjct: 506 RNLVACTLRRWSQSEATSS 521

[Close]

BLAST of Sed0020917 vs. ExPASy Swiss-Prot
Match: Q9C626 (F-box protein At1g47056 OS=Arabidopsis thaliana OX=3702 GN=At1g47056 PE=2 SV=1)

HSP 1 Score: 493.0 bits (1268), Expect = 4.1e-138
Identity = 267/524 (50.95%), Postives = 361/524 (68.89%), Query Frame = 0


Query: 1   MGQFYSSARTSLQLNYYQNRPLGCLITGLSSPLPLESPKKNDGVLLDCDDFTYSLPDECL 60
           MGQ  S+A  S+ LN  +++         +   P+ES +      +   D+T SLPDECL
Sbjct: 1   MGQSTSAAGNSI-LNRRRSK-------SFTLKFPIESIESE----ISQPDYTSSLPDECL 60

Query: 61  ASVFRFLNSGDRKSCSLVCKRWFQVEGQSRHRLSLNAQDEILPFLPSLFTRFDSLKKLSL 120
           A VF+FLNSG+RK C+LVC+RW  VEGQ+R+RLSL+A+ +++  +PSLF+RFDS+ KLSL
Sbjct: 61  ALVFQFLNSGNRKRCALVCRRWMIVEGQNRYRLSLHARSDLITSIPSLFSRFDSVTKLSL 120

Query: 121 RCNRKVSRINDDSLVLVSIRCRSLTRIKLSGRFQLTDEGIASFASNCKTLKKFSCSSCVL 180
           +C+R+   I D++LV +S+RCR+L R+KL    +LTD G+A+FA NCK LK FSC SC  
Sbjct: 121 KCDRRSVSIGDEALVKISLRCRNLKRLKLRACRELTDVGMAAFAENCKDLKIFSCGSCDF 180

Query: 181 GANSINALLKYCNSLEELSLKSLRSVV-AGTEPIVPG--AASLKSIVLKELIDGLSLIPL 240
           GA  + A+L +C++LEELS+K LR       E I PG  A+SLKSI LKEL +G    P+
Sbjct: 181 GAKGVKAVLDHCSNLEELSIKRLRGFTDIAPEMIGPGVAASSLKSICLKELYNGQCFGPV 240

Query: 241 IMGSRNLKALKIIRCQGNWDDLFKLFGCRNGMASLVEVHIERIQVSDVGLSAISNCLNLE 300
           I+G++NLK+LK+ RC G+WD L +    ++    +VE+H+ER+QVSDV LSAIS C +LE
Sbjct: 241 IVGAKNLKSLKLFRCSGDWDLLLQEMSGKD--HGVVEIHLERMQVSDVALSAISYCSSLE 300

Query: 301 ILHLIKVWECTNVGLACIAEHCKRIRKLHIDGWRTDRIGDEGLMAIAKQCIDLQELVLIA 360
            LHL+K  ECTN GLA IAE CKR+RKLHIDGW+ + IGDEGL+A+AK C  LQELVLI 
Sbjct: 301 SLHLVKTPECTNFGLAAIAEKCKRLRKLHIDGWKANLIGDEGLVAVAKFCSQLQELVLIG 360

Query: 361 VNPTCLSLSLLGKNCLNLERLAICG-SRVGDEEIACIAAKCKSLKKLCIKGCPISNIGIE 420
           VNPT LSL +L   CLNLERLA+CG    GD E++CIAAKC +L+KLCIK CPIS++GIE
Sbjct: 361 VNPTTLSLGMLAAKCLNLERLALCGCDTFGDPELSCIAAKCPALRKLCIKNCPISDVGIE 420

Query: 421 SLAWGCPNLAKIKVKKCRGVTGEIKEWLVEKRRSLSLNWDVEEIDHLDASCSDNGSAREV 480
           +LA GCP L K+K+KKC+GV G   +WL   R  LS+N D  E +H +A+ +D     + 
Sbjct: 421 NLANGCPGLTKVKIKKCKGVLGGCADWLRTVRPMLSVNADTMEQEHEEAASNDVVGGSQE 480

Query: 481 VVAESRPVETRVVA---AVNAGRRLTILKGTLGVLVGRSLMACT 518
              E   + ++++A   A ++  R    K  +G+  G SL+ CT
Sbjct: 481 NGIEFPQLNSQIMASSIASSSRNRSGYFKSGIGLFSGMSLVPCT 510

[Close]

BLAST of Sed0020917 vs. ExPASy Swiss-Prot
Match: Q9S9X4 (Putative F-box/LRR-repeat protein 8 OS=Arabidopsis thaliana OX=3702 GN=FBL8 PE=4 SV=1)

HSP 1 Score: 466.5 bits (1199), Expect = 4.1e-130
Identity = 243/475 (51.16%), Postives = 327/475 (68.84%), Query Frame = 0


Query: 50  DFTYSLPDECLASVFRFLNSGDRKSCSLVCKRWFQVEGQSRHRLSLNAQDEILPFLPSLF 109
           D+  +LPDECL+ +F+ L   D K CSLVC+RW  +EGQ RHRLSL AQ +++  +PSLF
Sbjct: 72  DYISNLPDECLSLIFQSLTCADLKRCSLVCRRWLTIEGQCRHRLSLKAQSDLISVIPSLF 131

Query: 110 TRFDSLKKLSLRCNRKVSRINDDSLVLVSIRCRSLTRIKLSGRFQLTDEGIASFASNCKT 169
           TRFDS+ KL LR +R+   I D++ V++S+RCR+LTR+KL G  +++D GI  F  NC++
Sbjct: 132 TRFDSVTKLVLRSDRRSLGICDNAFVMISVRCRNLTRLKLRGCPEISDLGIIGFTENCRS 191

Query: 170 LKKFSCSSCVLGANSINALLKYCNSLEELSLKSLRSVVAGTEPIVPG--AASLKSIVLKE 229
           LKK S  SC  G   +NALL  C  LEELS+K LR + AG E I PG  A SLK I LKE
Sbjct: 192 LKKVSFGSCGFGVKGMNALLNTCLGLEELSVKRLRGIGAGAELIGPGGAAGSLKVICLKE 251

Query: 230 LIDGLSLIPLIMGSRNLKALKIIRCQGNWDDLFKLFGCRNGMASLVEVHIERIQVSDVGL 289
           L +G    PL+ G++ L+ LKI RC G+WD +F+    R+ + ++VE+H+ERIQ+SD+GL
Sbjct: 252 LHNGQCFAPLLSGAKGLRILKIFRCSGDWDRVFE--AVRDKVNAIVEIHLERIQMSDLGL 311

Query: 290 SAISNCLNLEILHLIKVWECTNVGLACIAEHCKRIRKLHIDGWRTDRIGDEGLMAIAKQC 349
           +A+S C  +E+LHL+K  +CTNVGLA +AE CK +RKLHIDGW+T+RIGDEGL+ +AK C
Sbjct: 312 TALSKCSGVEVLHLVKTPDCTNVGLALVAERCKLLRKLHIDGWKTNRIGDEGLIVVAKYC 371

Query: 350 IDLQELVLIAVNPTCLSLSLLGKNCLNLERLAICGS-RVGDEEIACIAAKCKSLKKLCIK 409
            +LQELVLI VNPT LSL  +  NCLNLERLA+CGS  VGD E+ CIA KC +L+KLCIK
Sbjct: 372 WNLQELVLIGVNPTKLSLEAIVSNCLNLERLALCGSDTVGDTELCCIAEKCLALRKLCIK 431

Query: 410 GCPISNIGIESLAWGCPNLAKIKVKKCRGVTGEIKEWLVEKRRSLSLNWDVEEIDHLDAS 469
            CPI++ GI++L  GCPNL K+KVKKCRGVT +  + L ++R  L +N D  E   ++ S
Sbjct: 432 NCPITDDGIKALGNGCPNLLKVKVKKCRGVTTQGADLLRKRRALLVVNLDAPETPIVEGS 491

Query: 470 CSDNGSAREVV-VAESRPVETRVVAAVNAGRRLTILKGTLGVLVGRSLMACTIGR 521
             + G+    V    SR     +  A  +  R +  K  LG L  R+ ++C + R
Sbjct: 492 VGEGGAQENAVEFPPSRLQIPTIGLASGSTSRSSSFKLRLGFLSQRNFVSCALRR 544

[Close]

BLAST of Sed0020917 vs. ExPASy Swiss-Prot
Match: Q9C5D2 (F-box/LRR-repeat protein 4 OS=Arabidopsis thaliana OX=3702 GN=FBL4 PE=2 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 7.2e-26
Identity = 123/459 (26.80%), Postives = 191/459 (41.61%), Query Frame = 0


Query: 49  DDFTYSLPDECLASVFRFLNS-GDRKSCSLVCKRWFQVEGQSRHRLSLNAQ---DEILPF 108
           D     LP+E +  +FR L S  +R +CSLVCKRW  +E  SR  L + A    D+ +  
Sbjct: 5   DRINNCLPEELILEIFRRLESKPNRDACSLVCKRWLSLERFSRTTLRIGASFSPDDFISL 64

Query: 109 LPSLFTRFDSL---------------------------------KKLSLRC-----NRKV 168
           L   F    S+                                 KKL+ +      N + 
Sbjct: 65  LSRRFLYITSIHVDERISVSLPSLSPSPKRKRGRDSSSPSSSKRKKLTDKTHSGAENVES 124

Query: 169 SRINDDSLVLVSIRCRSLTRIKLSGRFQLTDEGIASFASNCKTLKKFSCSSCVLGANSIN 228
           S + D  L  ++     +  + L     ++  G+ S A  C +LK      C +G   + 
Sbjct: 125 SSLTDTGLTALANGFPRIENLSLIWCPNVSSVGLCSLAQKCTSLKSLDLQGCYVGDQGLA 184

Query: 229 ALLKYCNSLEELSLKSLRSVV-AGTEPIVPGAA-SLKSIVLKELIDGLSLIPLIMGSRNL 288
           A+ K+C  LEEL+L+    +   G   +V G + SLKSI +        L    +GS + 
Sbjct: 185 AVGKFCKQLEELNLRFCEGLTDVGVIDLVVGCSKSLKSIGVAASAKITDLSLEAVGS-HC 244

Query: 289 KALKIIRCQGNWDDLFKLFGCRNGMASLVEVHIERIQVSDVGLSAISN-CLNLEILHLIK 348
           K L+++     +     L     G   L  + ++ + V+DV  +A+   C +LE L L  
Sbjct: 245 KLLEVLYLDSEYIHDKGLIAVAQGCHRLKNLKLQCVSVTDVAFAAVGELCTSLERLALYS 304

Query: 349 VWECTN--------------------------VGLACIAEHCKRIRKLHIDGWRTDRIGD 408
               T+                           GL  IA  CK + ++ I+G     IG 
Sbjct: 305 FQHFTDKGMRAIGKGSKKLKDLTLSDCYFVSCKGLEAIAHGCKELERVEING--CHNIGT 364

Query: 409 EGLMAIAKQCIDLQELVLIAVNPTCLS-LSLLGKNCLNLERLAICG-SRVGDEEIACIAA 434
            G+ AI K C  L+EL L+       S L  +GK C +LE L +   S +GD  +  IA 
Sbjct: 365 RGIEAIGKSCPRLKELALLYCQRIGNSALQEIGKGCKSLEILHLVDCSGIGDIAMCSIAK 424

[Close]

BLAST of Sed0020917 vs. ExPASy TrEMBL
Match: A0A5A7VE64 (F-box protein SKIP2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold602G00280 PE=4 SV=1)

HSP 1 Score: 866.7 bits (2238), Expect = 5.1e-248
Identity = 440/532 (82.71%), Postives = 472/532 (88.72%), Query Frame = 0


Query: 1   MGQFYSSARTSLQLNYYQNRPLGCLITGLSSPLPLESPKKNDGVLLDCDDFTYSLPDECL 60
           MGQFYSSA TS  LN  Q  P G  I G SSPL L S ++ND  LLD  DFT+SLPDECL
Sbjct: 1   MGQFYSSAGTSPDLNCLQRWPPGSQIGGFSSPLALPSTEQNDEGLLDFVDFTFSLPDECL 60

Query: 61  ASVFRFLNSGDRKSCSLVCKRWFQVEGQSRHRLSLNAQDEILPFLPSLFTRFDSLKKLSL 120
           AS+FRFLNSGDRK CSLVCKRWFQVEGQSRHRLSLNAQDEILPFLPSLFTRFDS+KKLSL
Sbjct: 61  ASIFRFLNSGDRKICSLVCKRWFQVEGQSRHRLSLNAQDEILPFLPSLFTRFDSVKKLSL 120

Query: 121 RCNRKVSRINDDSLVLVSIRCRSLTRIKLSGRFQLTDEGIASFASNCKTLKKFSCSSCVL 180
           RCNRK+SRINDD+L LVSIRCR+LTRIKLSGRFQLTD GIA+FASNCKTLKKFSCSSC L
Sbjct: 121 RCNRKISRINDDALSLVSIRCRNLTRIKLSGRFQLTDMGIAAFASNCKTLKKFSCSSCTL 180

Query: 181 GANSINALLKYCNSLEELSLKSLRSVVAGTEPIVPG--AASLKSIVLKELIDGLSLIPLI 240
           G NSINALLK+C++LEELSLK LR V+AG EPIVPG  AASL+SI+LK+L DGLSLIPLI
Sbjct: 181 GGNSINALLKHCSTLEELSLKGLRGVIAGNEPIVPGAAAASLRSILLKDLADGLSLIPLI 240

Query: 241 MGSRNLKALKIIRCQGNWDDLFKLFGCRNGMASLVEVHIERIQVSDVGLSAISNCLNLEI 300
           MGS+NLKALKIIRCQGNWDDLF+LFG  N MASL EVHIERIQVSD G+SAISNCL+LEI
Sbjct: 241 MGSKNLKALKIIRCQGNWDDLFQLFGNGNAMASLTEVHIERIQVSDCGVSAISNCLDLEI 300

Query: 301 LHLIKVWECTNVGLACIAEHCKRIRKLHIDGWRTDRIGDEGLMAIAKQCIDLQELVLIAV 360
           LHLIKVW+C+N GLA IAEHCK+IRKLHIDGWR +RIGDEGLMAIAKQC+DLQELVLI V
Sbjct: 301 LHLIKVWDCSNFGLARIAEHCKKIRKLHIDGWRINRIGDEGLMAIAKQCLDLQELVLIGV 360

Query: 361 NPTCLSLSLLGKNCLNLERLAICGSRVGDEEIACIAAKCKSLKKLCIKGCPISNIGIESL 420
           NPTCLSLSLL  NC+NLERLA+CGSRVGDEEIACIAAKCKSLKKLCIKGCPISNIGIESL
Sbjct: 361 NPTCLSLSLLASNCVNLERLALCGSRVGDEEIACIAAKCKSLKKLCIKGCPISNIGIESL 420

Query: 421 AWGCPNLAKIKVKKCRGVTGEIKEWLVEKRRSLSLNWDVEEIDHLDASCSDNGSAREVVV 480
           AWGCPNLAKIKVKKC+GVTGEIKEWLVEKR SLS+NWDVEEIDHLDAS SD GSAREV +
Sbjct: 421 AWGCPNLAKIKVKKCKGVTGEIKEWLVEKRTSLSVNWDVEEIDHLDASSSDAGSAREVAI 480

Query: 481 AESRPVETRVVAAVNAGRRLTILKGTLGVLVGRSLMACTIGRWSNCTGSSSS 531
            E RP+ET V A V    RLTILK TLG+L GRSLMACT GRWSN T  SSS
Sbjct: 481 LEPRPMETGVEAPVAGDGRLTILKTTLGLLAGRSLMACTFGRWSNTTPDSSS 532

[Close]

BLAST of Sed0020917 vs. ExPASy TrEMBL
Match: A0A1S3CIC5 (F-box protein SKIP2 OS=Cucumis melo OX=3656 GN=LOC103501119 PE=4 SV=1)

HSP 1 Score: 866.7 bits (2238), Expect = 5.1e-248
Identity = 440/532 (82.71%), Postives = 472/532 (88.72%), Query Frame = 0


Query: 1   MGQFYSSARTSLQLNYYQNRPLGCLITGLSSPLPLESPKKNDGVLLDCDDFTYSLPDECL 60
           MGQFYSSA TS  LN  Q  P G  I G SSPL L S ++ND  LLD  DFT+SLPDECL
Sbjct: 1   MGQFYSSAGTSPDLNCLQRWPPGSQIGGFSSPLALPSTEQNDEGLLDFVDFTFSLPDECL 60

Query: 61  ASVFRFLNSGDRKSCSLVCKRWFQVEGQSRHRLSLNAQDEILPFLPSLFTRFDSLKKLSL 120
           AS+FRFLNSGDRK CSLVCKRWFQVEGQSRHRLSLNAQDEILPFLPSLFTRFDS+KKLSL
Sbjct: 61  ASIFRFLNSGDRKICSLVCKRWFQVEGQSRHRLSLNAQDEILPFLPSLFTRFDSVKKLSL 120

Query: 121 RCNRKVSRINDDSLVLVSIRCRSLTRIKLSGRFQLTDEGIASFASNCKTLKKFSCSSCVL 180
           RCNRK+SRINDD+L LVSIRCR+LTRIKLSGRFQLTD GIA+FASNCKTLKKFSCSSC L
Sbjct: 121 RCNRKISRINDDALSLVSIRCRNLTRIKLSGRFQLTDMGIAAFASNCKTLKKFSCSSCTL 180

Query: 181 GANSINALLKYCNSLEELSLKSLRSVVAGTEPIVPG--AASLKSIVLKELIDGLSLIPLI 240
           G NSINALLK+C++LEELSLK LR V+AG EPIVPG  AASL+SI+LK+L DGLSLIPLI
Sbjct: 181 GGNSINALLKHCSTLEELSLKGLRGVIAGNEPIVPGAAAASLRSILLKDLADGLSLIPLI 240

Query: 241 MGSRNLKALKIIRCQGNWDDLFKLFGCRNGMASLVEVHIERIQVSDVGLSAISNCLNLEI 300
           MGS+NLKALKIIRCQGNWDDLF+LFG  N MASL EVHIERIQVSD G+SAISNCL+LEI
Sbjct: 241 MGSKNLKALKIIRCQGNWDDLFQLFGNGNAMASLTEVHIERIQVSDCGVSAISNCLDLEI 300

Query: 301 LHLIKVWECTNVGLACIAEHCKRIRKLHIDGWRTDRIGDEGLMAIAKQCIDLQELVLIAV 360
           LHLIKVW+C+N GLA IAEHCK+IRKLHIDGWR +RIGDEGLMAIAKQC+DLQELVLI V
Sbjct: 301 LHLIKVWDCSNFGLARIAEHCKKIRKLHIDGWRINRIGDEGLMAIAKQCLDLQELVLIGV 360

Query: 361 NPTCLSLSLLGKNCLNLERLAICGSRVGDEEIACIAAKCKSLKKLCIKGCPISNIGIESL 420
           NPTCLSLSLL  NC+NLERLA+CGSRVGDEEIACIAAKCKSLKKLCIKGCPISNIGIESL
Sbjct: 361 NPTCLSLSLLASNCVNLERLALCGSRVGDEEIACIAAKCKSLKKLCIKGCPISNIGIESL 420

Query: 421 AWGCPNLAKIKVKKCRGVTGEIKEWLVEKRRSLSLNWDVEEIDHLDASCSDNGSAREVVV 480
           AWGCPNLAKIKVKKC+GVTGEIKEWLVEKR SLS+NWDVEEIDHLDAS SD GSAREV +
Sbjct: 421 AWGCPNLAKIKVKKCKGVTGEIKEWLVEKRTSLSVNWDVEEIDHLDASSSDAGSAREVAI 480

Query: 481 AESRPVETRVVAAVNAGRRLTILKGTLGVLVGRSLMACTIGRWSNCTGSSSS 531
            E RP+ET V A V    RLTILK TLG+L GRSLMACT GRWSN T  SSS
Sbjct: 481 LEPRPMETGVEAPVAGDGRLTILKTTLGLLAGRSLMACTFGRWSNTTPDSSS 532

[Close]

BLAST of Sed0020917 vs. ExPASy TrEMBL
Match: A0A0A0LQM7 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G427880 PE=4 SV=1)

HSP 1 Score: 860.9 bits (2223), Expect = 2.8e-246
Identity = 435/525 (82.86%), Postives = 471/525 (89.71%), Query Frame = 0


Query: 1   MGQFYSSARTSLQLNYYQNRPLGCLITGLSSPLPLESPKKNDGVLLDCDDFTYSLPDECL 60
           MGQFYSSA TS  LN  Q  P G  I G SSPL L S ++ND  LLD  DFT+SLPDECL
Sbjct: 1   MGQFYSSAGTSPDLNCLQQWPPGSQIGGFSSPLALPSTEQNDEGLLDFVDFTFSLPDECL 60

Query: 61  ASVFRFLNSGDRKSCSLVCKRWFQVEGQSRHRLSLNAQDEILPFLPSLFTRFDSLKKLSL 120
           AS+FRFLNSGDRKSCSLVCKRWFQVEGQSRHRLSLNAQDEILPFLPSLFTRFDS+KKLSL
Sbjct: 61  ASIFRFLNSGDRKSCSLVCKRWFQVEGQSRHRLSLNAQDEILPFLPSLFTRFDSVKKLSL 120

Query: 121 RCNRKVSRINDDSLVLVSIRCRSLTRIKLSGRFQLTDEGIASFASNCKTLKKFSCSSCVL 180
           RCNRK+SRINDD+L+LVSIRCR+LTRIKLSGRFQLTD GIA+FASNCKTLKKFSCS+C L
Sbjct: 121 RCNRKISRINDDALILVSIRCRNLTRIKLSGRFQLTDLGIAAFASNCKTLKKFSCSTCAL 180

Query: 181 GANSINALLKYCNSLEELSLKSLRSVVAGTEPIVPGAA--SLKSIVLKELIDGLSLIPLI 240
           G NSINALLK+C++LEELSLK LR V+AGTEPIVPGAA  SLKSI+LK+L+DGLSLIPLI
Sbjct: 181 GGNSINALLKHCSTLEELSLKGLRGVIAGTEPIVPGAAATSLKSILLKDLVDGLSLIPLI 240

Query: 241 MGSRNLKALKIIRCQGNWDDLFKLFGCRNGMASLVEVHIERIQVSDVGLSAISNCLNLEI 300
           MGS+NLKALKIIRCQGNWDDLF+LFG  N MASL+EVHIERIQVSD G+SAISNCL+LEI
Sbjct: 241 MGSKNLKALKIIRCQGNWDDLFQLFGHGNAMASLIEVHIERIQVSDCGVSAISNCLDLEI 300

Query: 301 LHLIKVWECTNVGLACIAEHCKRIRKLHIDGWRTDRIGDEGLMAIAKQCIDLQELVLIAV 360
           LHLIKVW+C+N GLA IAE+CK+IRKLHIDGWR +RIGDEGLMAIAKQC+DLQELVLI V
Sbjct: 301 LHLIKVWDCSNFGLARIAEYCKKIRKLHIDGWRINRIGDEGLMAIAKQCVDLQELVLIGV 360

Query: 361 NPTCLSLSLLGKNCLNLERLAICGSRVGDEEIACIAAKCKSLKKLCIKGCPISNIGIESL 420
           NPTCLSLSLL  NC+NLERLA+CGSRVGDEEIACIAAKCKSLKKLCIKGCPISNIGIESL
Sbjct: 361 NPTCLSLSLLASNCVNLERLALCGSRVGDEEIACIAAKCKSLKKLCIKGCPISNIGIESL 420

Query: 421 AWGCPNLAKIKVKKCRGVTGEIKEWLVEKRRSLSLNWDVEEIDHLDASCSDNGSAREVVV 480
           AWGCPNLAKIKVKKC+GVTGEIKEWLVEKR SLS+NWDVEEIDHLDAS SD GSA EV V
Sbjct: 421 AWGCPNLAKIKVKKCKGVTGEIKEWLVEKRTSLSVNWDVEEIDHLDASSSDAGSAGEVAV 480

Query: 481 AESRPVETRVVAAVNAGRRLTILKGTLGVLVGRSLMACTIGRWSN 524
            E R +ET V A V    RLTILK TLG+L GRSLMACT GRWS+
Sbjct: 481 LEPRLMETGVGAPVAGDGRLTILKTTLGLLAGRSLMACTFGRWSS 525

[Close]

BLAST of Sed0020917 vs. ExPASy TrEMBL
Match: A0A6J1JBA7 (F-box protein SKIP2-like OS=Cucurbita maxima OX=3661 GN=LOC111484217 PE=4 SV=1)

HSP 1 Score: 840.5 bits (2170), Expect = 3.9e-240
Identity = 429/532 (80.64%), Postives = 467/532 (87.78%), Query Frame = 0


Query: 1   MGQFYSSARTSLQLNYYQNRPLGCLITGLSSPLPLESPKKNDGVLLDCDDFTYSLPDECL 60
           MGQFYSS  TSL L+ +Q  P G L+  LSS  PL  P  ++G LL+  DFT+ LPDECL
Sbjct: 1   MGQFYSSPETSLDLHDHQQWPPGSLVGALSSS-PLVLPSTDEG-LLNFVDFTFPLPDECL 60

Query: 61  ASVFRFLNSGDRKSCSLVCKRWFQVEGQSRHRLSLNAQDEILPFLPSLFTRFDSLKKLSL 120
           AS+FRFLNSGDRKSCSLVCKRWFQVE +SRHRLSLNAQDEILPFLPSLF RFDS+KKLSL
Sbjct: 61  ASIFRFLNSGDRKSCSLVCKRWFQVESESRHRLSLNAQDEILPFLPSLFARFDSVKKLSL 120

Query: 121 RCNRKVSRINDDSLVLVSIRCRSLTRIKLSGRFQLTDEGIASFASNCKTLKKFSCSSCVL 180
           RCNRK+SRINDD+L+LVSIRCRSLTRIKLSGRFQLTD GIA+FASNCKTLKKFSCSSC L
Sbjct: 121 RCNRKISRINDDALILVSIRCRSLTRIKLSGRFQLTDMGIATFASNCKTLKKFSCSSCAL 180

Query: 181 GANSINALLKYCNSLEELSLKSLRSVVAGTEPIVPG--AASLKSIVLKELIDGLSLIPLI 240
           GANSINALLK  ++LEELSLK LR V+AGTEPIVPG  AASLKSI+LK+L+DGLSL PLI
Sbjct: 181 GANSINALLKNSSTLEELSLKGLRGVIAGTEPIVPGVAAASLKSILLKDLVDGLSLTPLI 240

Query: 241 MGSRNLKALKIIRCQGNWDDLFKLFGCRNGMASLVEVHIERIQVSDVGLSAISNCLNLEI 300
           MGS+NLKALKIIRCQGNWD+LF+ FG  N MASL+EVHIERIQVSD G+SAISNCLNLEI
Sbjct: 241 MGSKNLKALKIIRCQGNWDELFQFFGHGNSMASLIEVHIERIQVSDCGVSAISNCLNLEI 300

Query: 301 LHLIKVWECTNVGLACIAEHCKRIRKLHIDGWRTDRIGDEGLMAIAKQCIDLQELVLIAV 360
           LHLIKVW+C+N GLACIAEHCKR+RKLHIDGWR +RIGDEGL+AIAKQC+DLQELVLI V
Sbjct: 301 LHLIKVWDCSNFGLACIAEHCKRLRKLHIDGWRINRIGDEGLIAIAKQCLDLQELVLIGV 360

Query: 361 NPTCLSLSLLGKNCLNLERLAICGSRVGDEEIACIAAKCKSLKKLCIKGCPISNIGIESL 420
           NPTCLSLS+L  NC+NLERLA+CGSRVGDEEIACIAAKCKSLKKLCIKGCPISNIGIESL
Sbjct: 361 NPTCLSLSMLASNCVNLERLALCGSRVGDEEIACIAAKCKSLKKLCIKGCPISNIGIESL 420

Query: 421 AWGCPNLAKIKVKKCRGVTGEIKEWLVEKRRSLSLNWDVEEIDHLDASCSDNGSAREVVV 480
           AWGCPNLAKIKVKKCRGVTGEIKEWLVEKR SLS+NWDVEEIDHLDAS SD GS +EV V
Sbjct: 421 AWGCPNLAKIKVKKCRGVTGEIKEWLVEKRTSLSVNWDVEEIDHLDASSSDAGSGQEVAV 480

Query: 481 AESRPVETRVVAAVNAGRRLTILKGTLGVLVGRSLMACTIGRWSNCTGSSSS 531
            E+R VET   A V   R LTILK TL  L GRSLMACT GRW N   SS+S
Sbjct: 481 LETRLVETGGEAPVVGDRWLTILKTTLSGLSGRSLMACTFGRWPNSPNSSNS 530

[Close]

BLAST of Sed0020917 vs. ExPASy TrEMBL
Match: A0A6J1FUD4 (F-box protein SKIP2-like OS=Cucurbita moschata OX=3662 GN=LOC111448876 PE=4 SV=1)

HSP 1 Score: 838.6 bits (2165), Expect = 1.5e-239
Identity = 430/532 (80.83%), Postives = 465/532 (87.41%), Query Frame = 0


Query: 1   MGQFYSSARTSLQLNYYQNRPLGCLITGLSSPLPLESPKKNDGVLLDCDDFTYSLPDECL 60
           MGQFYSS  TSLQL  +Q  P G  +  LSS  PL  P  ++G LL+  DFT+ LPDECL
Sbjct: 1   MGQFYSSPETSLQLRDHQQWPPGSQVGALSSS-PLVLPSMDEG-LLNFVDFTFPLPDECL 60

Query: 61  ASVFRFLNSGDRKSCSLVCKRWFQVEGQSRHRLSLNAQDEILPFLPSLFTRFDSLKKLSL 120
           AS+FRFLNSGDRKSCSLVCKRWFQVEG+SRHRLSLNAQDEILPFLPSLF RFDS+KKLSL
Sbjct: 61  ASIFRFLNSGDRKSCSLVCKRWFQVEGESRHRLSLNAQDEILPFLPSLFARFDSVKKLSL 120

Query: 121 RCNRKVSRINDDSLVLVSIRCRSLTRIKLSGRFQLTDEGIASFASNCKTLKKFSCSSCVL 180
           RCNRK+SRINDD+L+LVSIRCRSLTRIKLSGRFQLTD GIA+FASNCKTLKKFSCSSC L
Sbjct: 121 RCNRKISRINDDALILVSIRCRSLTRIKLSGRFQLTDMGIATFASNCKTLKKFSCSSCAL 180

Query: 181 GANSINALLKYCNSLEELSLKSLRSVVAGTEPIVPG--AASLKSIVLKELIDGLSLIPLI 240
           GANSINALLK  ++LEELSLK LR V+AGTEPIVPG  AASLKSI+LK+L+DGLSL PLI
Sbjct: 181 GANSINALLKNSSTLEELSLKGLRGVIAGTEPIVPGVAAASLKSILLKDLVDGLSLTPLI 240

Query: 241 MGSRNLKALKIIRCQGNWDDLFKLFGCRNGMASLVEVHIERIQVSDVGLSAISNCLNLEI 300
           MGS+NLKALKIIRCQGNWD+LF+ FG  N MASL+EVHIERIQVSD G+SAISNCLNLEI
Sbjct: 241 MGSKNLKALKIIRCQGNWDELFQFFGHGNAMASLIEVHIERIQVSDCGVSAISNCLNLEI 300

Query: 301 LHLIKVWECTNVGLACIAEHCKRIRKLHIDGWRTDRIGDEGLMAIAKQCIDLQELVLIAV 360
           LHLIKVW+C+N GLA IAEHCKR+RKLHIDGWR +RIGDEGL+AIAKQC+DLQELVLI V
Sbjct: 301 LHLIKVWDCSNFGLASIAEHCKRLRKLHIDGWRINRIGDEGLIAIAKQCLDLQELVLIGV 360

Query: 361 NPTCLSLSLLGKNCLNLERLAICGSRVGDEEIACIAAKCKSLKKLCIKGCPISNIGIESL 420
           NPTCLSLSLL  NC+NLERLA+CGSRVGDEEIACIAAKCKSLKKLCIKGCPISNIGIESL
Sbjct: 361 NPTCLSLSLLASNCVNLERLALCGSRVGDEEIACIAAKCKSLKKLCIKGCPISNIGIESL 420

Query: 421 AWGCPNLAKIKVKKCRGVTGEIKEWLVEKRRSLSLNWDVEEIDHLDASCSDNGSAREVVV 480
           AWGCPNLAKIKVKKCRGVTGEIKEWLVEKR SLS+NWDVEEIDHLDAS SD GS +EV V
Sbjct: 421 AWGCPNLAKIKVKKCRGVTGEIKEWLVEKRTSLSVNWDVEEIDHLDASSSDAGSGQEVAV 480

Query: 481 AESRPVETRVVAAVNAGRRLTILKGTLGVLVGRSLMACTIGRWSNCTGSSSS 531
            E+R VET   A V   R LTILK TL  L GRSLMACT GRW N    SSS
Sbjct: 481 PETRLVETGGEAPVVGDRWLTILKTTLSGLSGRSLMACTFGRWPNSPNGSSS 530

[Close]

BLAST of Sed0020917 vs. TAIR 10
Match: AT5G67250.1 (SKP1/ASK1-interacting protein 2 )

HSP 1 Score: 516.9 bits (1330), Expect = 1.9e-146
Identity = 268/492 (54.47%), Postives = 354/492 (71.95%), Query Frame = 0


Query: 50  DFTYSLPDECLASVFRFLNSGDRKSCSLVCKRWFQVEGQSRHRLSLNAQDEILPFLPSLF 109
           DFT  LPDECLA VF+FL +GDRK CSLVCKRW  V+GQSRHRLSL+A+DEI  FL S+F
Sbjct: 41  DFTGDLPDECLAHVFQFLGAGDRKRCSLVCKRWLLVDGQSRHRLSLDAKDEISSFLTSMF 100

Query: 110 TRFDSLKKLSLRCNRKVSRINDDSLVLVSIRCRSLTRIKLSGRFQLTDEGIASFASNCKT 169
            RFDS+ KL+LRC+RK   ++D++L ++S+RC +LTR+KL G  ++TD G+  FA NCK 
Sbjct: 101 NRFDSVTKLALRCDRKSVSLSDEALAMISVRCLNLTRVKLRGCREITDLGMEDFAKNCKN 160

Query: 170 LKKFSCSSCVLGANSINALLKYCNSLEELSLKSLRSVVAGTE----PIVPGAASLKSIVL 229
           LKK S  SC  GA  +NA+L++C  LEELS+K LR +    E    P    ++SL+SI L
Sbjct: 161 LKKLSVGSCNFGAKGVNAMLEHCKLLEELSVKRLRGIHEAAELIHLPDDASSSSLRSICL 220

Query: 230 KELIDGLSLIPLIMGSRNLKALKIIRCQGNWDDLFKLFGCRNGMASLVEVHIERIQVSDV 289
           KEL++G    PL+  +R LK LKIIRC G+WD + ++    NG +SL E+H+ER+QVSD+
Sbjct: 221 KELVNGQVFEPLLATTRTLKTLKIIRCLGDWDKVLQMIA--NGKSSLSEIHLERLQVSDI 280

Query: 290 GLSAISNCLNLEILHLIKVWECTNVGLACIAEHCKRIRKLHIDGWRTDRIGDEGLMAIAK 349
           GLSAIS C N+E LH++K  EC+N GL  +AE CK +RKLHIDGWRT+RIGDEGL+++AK
Sbjct: 281 GLSAISKCSNVETLHIVKTPECSNFGLIYVAERCKLLRKLHIDGWRTNRIGDEGLLSVAK 340

Query: 350 QCIDLQELVLIAVNPTCLSLSLLGKNCLNLERLAICGS-RVGDEEIACIAAKCKSLKKLC 409
            C++LQELVLI VN T +SL+ +  NC  LERLA+CGS  +GD EIACIA KC +L+K C
Sbjct: 341 HCLNLQELVLIGVNATHMSLAAIASNCEKLERLALCGSGTIGDTEIACIARKCGALRKFC 400

Query: 410 IKGCPISNIGIESLAWGCPNLAKIKVKKCRGVTGEIKEWLVEKRRSLSLNWDVEEIDHLD 469
           IKGCP+S+ GIE+LA GCPNL K+KVKKC+ VTGEI +WL E+RR+L ++ D +E    +
Sbjct: 401 IKGCPVSDRGIEALAVGCPNLVKLKVKKCKVVTGEIGDWLREQRRTLVVSMDGDE---TE 460

Query: 470 ASCSDNGSAREVVVAESRPVET-RVVAAVNA-----GRRLTILKGTLGVLVGRSLMACTI 529
           A    +G   E VV E R  +   +VA + +     G RL +++  LG L GR+L+ CT 
Sbjct: 461 AVVVVDGEV-ETVVEEPRVAQAGGIVAEIGSSNGGGGSRLAMIRSKLGFLAGRNLVTCTF 520

Query: 530 GRWSNCTGSSSS 531
            RWS+   +SSS
Sbjct: 521 RRWSHNDNASSS 526

[Close]

BLAST of Sed0020917 vs. TAIR 10
Match: AT3G50080.1 (VIER F-box proteine 2 )

HSP 1 Score: 506.9 bits (1304), Expect = 2.0e-143
Identity = 261/499 (52.30%), Postives = 356/499 (71.34%), Query Frame = 0


Query: 46  LDCD---------DFTYSLPDECLASVFRFLNSGDRKSCSLVCKRWFQVEGQSRHRLSLN 105
           LDC+         DFT +LPD+CLA +F+FL++GDRK CSLV KRW  V+GQ+RHRLSL+
Sbjct: 26  LDCESIGFEDGDYDFTANLPDDCLAHIFQFLSAGDRKRCSLVSKRWLLVDGQNRHRLSLD 85

Query: 106 AQDEILPFLPSLFTRFDSLKKLSLRCNRKVSRINDDSLVLVSIRCRSLTRIKLSGRFQLT 165
           A+ EILPFLP +F RFDS+ KL+LRC+R+   ++D++L +VSIRC +L R+KL G  ++T
Sbjct: 86  AKSEILPFLPCIFNRFDSVTKLALRCDRRSFSLSDEALFIVSIRCSNLIRVKLRGCREIT 145

Query: 166 DEGIASFASNCKTLKKFSCSSCVLGANSINALLKYCNSLEELSLKSLRSVVAGTEPI-VP 225
           D G+ SFA NCK+L+K SC SC  GA  INA+L++C  LEELSLK +R +    EPI + 
Sbjct: 146 DLGMESFARNCKSLRKLSCGSCTFGAKGINAMLEHCKVLEELSLKRIRGLHELAEPIKLS 205

Query: 226 GAASLKSIVLKELIDGLSLIPLIMGSRNLKALKIIRCQGNWDDLFKLFGCRNGMASLVEV 285
            +ASL+S+ LKEL++G  +   ++ +R LK +KIIRC GNWD +F++ G  NG +SL E+
Sbjct: 206 LSASLRSVFLKELVNG-QVFGSLVATRTLKKVKIIRCLGNWDRVFEMNG--NGNSSLTEI 265

Query: 286 HIERIQVSDVGLSAISNCLNLEILHLIKVWECTNVGLACIAEHCKRIRKLHIDGWRTDRI 345
            +ER+QV+D+GL  IS C NLE LH++K  +C+N+GLA + E CK +RKLHIDGWR  RI
Sbjct: 266 RLERLQVTDIGLFGISKCSNLETLHIVKTPDCSNLGLASVVERCKLLRKLHIDGWRVKRI 325

Query: 346 GDEGLMAIAKQCIDLQELVLIAVNPTCLSLSLLGKNCLNLERLAICGS-RVGDEEIACIA 405
           GD+GLM++AK C++LQELVLI V+ T +SLS +  NC  LERLA+CGS  +GD EI CIA
Sbjct: 326 GDQGLMSVAKHCLNLQELVLIGVDATYMSLSAIASNCKKLERLALCGSGTIGDAEIGCIA 385

Query: 406 AKCKSLKKLCIKGCPISNIGIESLAWGCPNLAKIKVKKCRGVTGEIKEWLVEKRRSLSLN 465
            KC +L+K CIKGC IS++G+++LA GCP L K+KVKKC  VTGE++EWL E+R +L ++
Sbjct: 386 EKCVTLRKFCIKGCLISDVGVQALALGCPKLVKLKVKKCSLVTGEVREWLRERRMTLVVS 445

Query: 466 WDVEEIDHLDASCSDNGSAREVVVAESRP--VETRVVAAVNAGRR--LTILKGTLGVLVG 525
            D +E + +      +    E VV E  P  ++      V  G R  L ILK  LG+L G
Sbjct: 446 MDDDETNGVGLVDGGDQRVLETVVEEEAPPVIDGDGGLGVAGGGRLGLAILKTKLGLLAG 505

Query: 526 RSLMACTIGRWSNCTGSSS 530
           R+L+ACT+ RWS    +SS
Sbjct: 506 RNLVACTLRRWSQSEATSS 521

[Close]

BLAST of Sed0020917 vs. TAIR 10
Match: AT1G47056.1 (VIER F-box proteine 1 )

HSP 1 Score: 493.0 bits (1268), Expect = 2.9e-139
Identity = 267/524 (50.95%), Postives = 361/524 (68.89%), Query Frame = 0


Query: 1   MGQFYSSARTSLQLNYYQNRPLGCLITGLSSPLPLESPKKNDGVLLDCDDFTYSLPDECL 60
           MGQ  S+A  S+ LN  +++         +   P+ES +      +   D+T SLPDECL
Sbjct: 1   MGQSTSAAGNSI-LNRRRSK-------SFTLKFPIESIESE----ISQPDYTSSLPDECL 60

Query: 61  ASVFRFLNSGDRKSCSLVCKRWFQVEGQSRHRLSLNAQDEILPFLPSLFTRFDSLKKLSL 120
           A VF+FLNSG+RK C+LVC+RW  VEGQ+R+RLSL+A+ +++  +PSLF+RFDS+ KLSL
Sbjct: 61  ALVFQFLNSGNRKRCALVCRRWMIVEGQNRYRLSLHARSDLITSIPSLFSRFDSVTKLSL 120

Query: 121 RCNRKVSRINDDSLVLVSIRCRSLTRIKLSGRFQLTDEGIASFASNCKTLKKFSCSSCVL 180
           +C+R+   I D++LV +S+RCR+L R+KL    +LTD G+A+FA NCK LK FSC SC  
Sbjct: 121 KCDRRSVSIGDEALVKISLRCRNLKRLKLRACRELTDVGMAAFAENCKDLKIFSCGSCDF 180

Query: 181 GANSINALLKYCNSLEELSLKSLRSVV-AGTEPIVPG--AASLKSIVLKELIDGLSLIPL 240
           GA  + A+L +C++LEELS+K LR       E I PG  A+SLKSI LKEL +G    P+
Sbjct: 181 GAKGVKAVLDHCSNLEELSIKRLRGFTDIAPEMIGPGVAASSLKSICLKELYNGQCFGPV 240

Query: 241 IMGSRNLKALKIIRCQGNWDDLFKLFGCRNGMASLVEVHIERIQVSDVGLSAISNCLNLE 300
           I+G++NLK+LK+ RC G+WD L +    ++    +VE+H+ER+QVSDV LSAIS C +LE
Sbjct: 241 IVGAKNLKSLKLFRCSGDWDLLLQEMSGKD--HGVVEIHLERMQVSDVALSAISYCSSLE 300

Query: 301 ILHLIKVWECTNVGLACIAEHCKRIRKLHIDGWRTDRIGDEGLMAIAKQCIDLQELVLIA 360
            LHL+K  ECTN GLA IAE CKR+RKLHIDGW+ + IGDEGL+A+AK C  LQELVLI 
Sbjct: 301 SLHLVKTPECTNFGLAAIAEKCKRLRKLHIDGWKANLIGDEGLVAVAKFCSQLQELVLIG 360

Query: 361 VNPTCLSLSLLGKNCLNLERLAICG-SRVGDEEIACIAAKCKSLKKLCIKGCPISNIGIE 420
           VNPT LSL +L   CLNLERLA+CG    GD E++CIAAKC +L+KLCIK CPIS++GIE
Sbjct: 361 VNPTTLSLGMLAAKCLNLERLALCGCDTFGDPELSCIAAKCPALRKLCIKNCPISDVGIE 420

Query: 421 SLAWGCPNLAKIKVKKCRGVTGEIKEWLVEKRRSLSLNWDVEEIDHLDASCSDNGSAREV 480
           +LA GCP L K+K+KKC+GV G   +WL   R  LS+N D  E +H +A+ +D     + 
Sbjct: 421 NLANGCPGLTKVKIKKCKGVLGGCADWLRTVRPMLSVNADTMEQEHEEAASNDVVGGSQE 480

Query: 481 VVAESRPVETRVVA---AVNAGRRLTILKGTLGVLVGRSLMACT 518
              E   + ++++A   A ++  R    K  +G+  G SL+ CT
Sbjct: 481 NGIEFPQLNSQIMASSIASSSRNRSGYFKSGIGLFSGMSLVPCT 510

[Close]

BLAST of Sed0020917 vs. TAIR 10
Match: AT4G07400.1 (VIER F-box proteine 3 )

HSP 1 Score: 466.5 bits (1199), Expect = 2.9e-131
Identity = 243/475 (51.16%), Postives = 327/475 (68.84%), Query Frame = 0


Query: 50  DFTYSLPDECLASVFRFLNSGDRKSCSLVCKRWFQVEGQSRHRLSLNAQDEILPFLPSLF 109
           D+  +LPDECL+ +F+ L   D K CSLVC+RW  +EGQ RHRLSL AQ +++  +PSLF
Sbjct: 72  DYISNLPDECLSLIFQSLTCADLKRCSLVCRRWLTIEGQCRHRLSLKAQSDLISVIPSLF 131

Query: 110 TRFDSLKKLSLRCNRKVSRINDDSLVLVSIRCRSLTRIKLSGRFQLTDEGIASFASNCKT 169
           TRFDS+ KL LR +R+   I D++ V++S+RCR+LTR+KL G  +++D GI  F  NC++
Sbjct: 132 TRFDSVTKLVLRSDRRSLGICDNAFVMISVRCRNLTRLKLRGCPEISDLGIIGFTENCRS 191

Query: 170 LKKFSCSSCVLGANSINALLKYCNSLEELSLKSLRSVVAGTEPIVPG--AASLKSIVLKE 229
           LKK S  SC  G   +NALL  C  LEELS+K LR + AG E I PG  A SLK I LKE
Sbjct: 192 LKKVSFGSCGFGVKGMNALLNTCLGLEELSVKRLRGIGAGAELIGPGGAAGSLKVICLKE 251

Query: 230 LIDGLSLIPLIMGSRNLKALKIIRCQGNWDDLFKLFGCRNGMASLVEVHIERIQVSDVGL 289
           L +G    PL+ G++ L+ LKI RC G+WD +F+    R+ + ++VE+H+ERIQ+SD+GL
Sbjct: 252 LHNGQCFAPLLSGAKGLRILKIFRCSGDWDRVFE--AVRDKVNAIVEIHLERIQMSDLGL 311

Query: 290 SAISNCLNLEILHLIKVWECTNVGLACIAEHCKRIRKLHIDGWRTDRIGDEGLMAIAKQC 349
           +A+S C  +E+LHL+K  +CTNVGLA +AE CK +RKLHIDGW+T+RIGDEGL+ +AK C
Sbjct: 312 TALSKCSGVEVLHLVKTPDCTNVGLALVAERCKLLRKLHIDGWKTNRIGDEGLIVVAKYC 371

Query: 350 IDLQELVLIAVNPTCLSLSLLGKNCLNLERLAICGS-RVGDEEIACIAAKCKSLKKLCIK 409
            +LQELVLI VNPT LSL  +  NCLNLERLA+CGS  VGD E+ CIA KC +L+KLCIK
Sbjct: 372 WNLQELVLIGVNPTKLSLEAIVSNCLNLERLALCGSDTVGDTELCCIAEKCLALRKLCIK 431

Query: 410 GCPISNIGIESLAWGCPNLAKIKVKKCRGVTGEIKEWLVEKRRSLSLNWDVEEIDHLDAS 469
            CPI++ GI++L  GCPNL K+KVKKCRGVT +  + L ++R  L +N D  E   ++ S
Sbjct: 432 NCPITDDGIKALGNGCPNLLKVKVKKCRGVTTQGADLLRKRRALLVVNLDAPETPIVEGS 491

Query: 470 CSDNGSAREVV-VAESRPVETRVVAAVNAGRRLTILKGTLGVLVGRSLMACTIGR 521
             + G+    V    SR     +  A  +  R +  K  LG L  R+ ++C + R
Sbjct: 492 VGEGGAQENAVEFPPSRLQIPTIGLASGSTSRSSSFKLRLGFLSQRNFVSCALRR 544

[Close]

BLAST of Sed0020917 vs. TAIR 10
Match: AT4G15475.1 (F-box/RNI-like superfamily protein )

HSP 1 Score: 120.2 bits (300), Expect = 5.1e-27
Identity = 123/459 (26.80%), Postives = 191/459 (41.61%), Query Frame = 0


Query: 49  DDFTYSLPDECLASVFRFLNS-GDRKSCSLVCKRWFQVEGQSRHRLSLNAQ---DEILPF 108
           D     LP+E +  +FR L S  +R +CSLVCKRW  +E  SR  L + A    D+ +  
Sbjct: 5   DRINNCLPEELILEIFRRLESKPNRDACSLVCKRWLSLERFSRTTLRIGASFSPDDFISL 64

Query: 109 LPSLFTRFDSL---------------------------------KKLSLRC-----NRKV 168
           L   F    S+                                 KKL+ +      N + 
Sbjct: 65  LSRRFLYITSIHVDERISVSLPSLSPSPKRKRGRDSSSPSSSKRKKLTDKTHSGAENVES 124

Query: 169 SRINDDSLVLVSIRCRSLTRIKLSGRFQLTDEGIASFASNCKTLKKFSCSSCVLGANSIN 228
           S + D  L  ++     +  + L     ++  G+ S A  C +LK      C +G   + 
Sbjct: 125 SSLTDTGLTALANGFPRIENLSLIWCPNVSSVGLCSLAQKCTSLKSLDLQGCYVGDQGLA 184

Query: 229 ALLKYCNSLEELSLKSLRSVV-AGTEPIVPGAA-SLKSIVLKELIDGLSLIPLIMGSRNL 288
           A+ K+C  LEEL+L+    +   G   +V G + SLKSI +        L    +GS + 
Sbjct: 185 AVGKFCKQLEELNLRFCEGLTDVGVIDLVVGCSKSLKSIGVAASAKITDLSLEAVGS-HC 244

Query: 289 KALKIIRCQGNWDDLFKLFGCRNGMASLVEVHIERIQVSDVGLSAISN-CLNLEILHLIK 348
           K L+++     +     L     G   L  + ++ + V+DV  +A+   C +LE L L  
Sbjct: 245 KLLEVLYLDSEYIHDKGLIAVAQGCHRLKNLKLQCVSVTDVAFAAVGELCTSLERLALYS 304

Query: 349 VWECTN--------------------------VGLACIAEHCKRIRKLHIDGWRTDRIGD 408
               T+                           GL  IA  CK + ++ I+G     IG 
Sbjct: 305 FQHFTDKGMRAIGKGSKKLKDLTLSDCYFVSCKGLEAIAHGCKELERVEING--CHNIGT 364

Query: 409 EGLMAIAKQCIDLQELVLIAVNPTCLS-LSLLGKNCLNLERLAICG-SRVGDEEIACIAA 434
            G+ AI K C  L+EL L+       S L  +GK C +LE L +   S +GD  +  IA 
Sbjct: 365 RGIEAIGKSCPRLKELALLYCQRIGNSALQEIGKGCKSLEILHLVDCSGIGDIAMCSIAK 424

The following BLAST results are available for this feature:

BLAST of Sed0020917 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038901763.1	5.3e-252	83.11	F-box protein SKIP2-like [Benincasa hispida]	[more]
XP_008462840.1	1.0e-247	82.71	PREDICTED: F-box protein SKIP2 [Cucumis melo] >KAA0066413.1 F-box protein SKIP2 ...	[more]
XP_004151915.1	5.7e-246	82.86	F-box protein SKIP2 [Cucumis sativus] >KGN63314.1 hypothetical protein Csa_02243...	[more]
XP_022986496.1	8.0e-240	80.64	F-box protein SKIP2-like [Cucurbita maxima]	[more]
XP_022944421.1	3.0e-239	80.83	F-box protein SKIP2-like [Cucurbita moschata]	[more]

BLAST of Sed0020917 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FE83	2.7e-145	54.47	F-box protein SKIP2 OS=Arabidopsis thaliana OX=3702 GN=SKIP2 PE=1 SV=1	[more]
Q9SN10	2.8e-142	52.30	F-box/LRR-repeat protein 16 OS=Arabidopsis thaliana OX=3702 GN=FBL16 PE=2 SV=1	[more]
Q9C626	4.1e-138	50.95	F-box protein At1g47056 OS=Arabidopsis thaliana OX=3702 GN=At1g47056 PE=2 SV=1	[more]
Q9S9X4	4.1e-130	51.16	Putative F-box/LRR-repeat protein 8 OS=Arabidopsis thaliana OX=3702 GN=FBL8 PE=4...	[more]
Q9C5D2	7.2e-26	26.80	F-box/LRR-repeat protein 4 OS=Arabidopsis thaliana OX=3702 GN=FBL4 PE=2 SV=1	[more]

BLAST of Sed0020917 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VE64	5.1e-248	82.71	F-box protein SKIP2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold602G...	[more]
A0A1S3CIC5	5.1e-248	82.71	F-box protein SKIP2 OS=Cucumis melo OX=3656 GN=LOC103501119 PE=4 SV=1	[more]
A0A0A0LQM7	2.8e-246	82.86	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G427880 PE=4 ...	[more]
A0A6J1JBA7	3.9e-240	80.64	F-box protein SKIP2-like OS=Cucurbita maxima OX=3661 GN=LOC111484217 PE=4 SV=1	[more]
A0A6J1FUD4	1.5e-239	80.83	F-box protein SKIP2-like OS=Cucurbita moschata OX=3662 GN=LOC111448876 PE=4 SV=1	[more]

BLAST of Sed0020917 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G67250.1	1.9e-146	54.47	SKP1/ASK1-interacting protein 2	[more]
AT3G50080.1	2.0e-143	52.30	VIER F-box proteine 2	[more]
AT1G47056.1	2.9e-139	50.95	VIER F-box proteine 1	[more]
AT4G07400.1	2.9e-131	51.16	VIER F-box proteine 3	[more]
AT4G15475.1	5.1e-27	26.80	F-box/RNI-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	SMART	SM00256	fbox_2	coord: 55..95 e-value: 0.0048 score: 26.1
IPR006553	Leucine-rich repeat, cysteine-containing subtype	SMART	SM00367	LRR_CC_2	coord: 372..396 e-value: 47.0 score: 9.3 coord: 397..421 e-value: 0.23 score: 20.5 coord: 293..318 e-value: 120.0 score: 6.2 coord: 319..346 e-value: 34.0 score: 10.4 coord: 167..191 e-value: 160.0 score: 5.1 coord: 141..166 e-value: 0.074 score: 22.2
IPR041567	COI1, F-box	PFAM	PF18511	F-box_5	coord: 53..91 e-value: 2.7E-9 score: 36.4
None	No IPR available	GENE3D	1.20.1280.50		coord: 51..87 e-value: 1.6E-15 score: 58.3
None	No IPR available	PANTHER	PTHR13318:SF133	F-BOX PROTEIN SKIP2	coord: 36..463
None	No IPR available	PANTHER	PTHR13318	UNCHARACTERIZED	coord: 36..463
None	No IPR available	SUPERFAMILY	52047	RNI-like	coord: 98..463
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 88..492 e-value: 4.4E-53 score: 182.3
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 48..85

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0020917.1	Sed0020917.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051716	cellular response to stimulus
biological_process	GO:0031146	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
cellular_component	GO:0019005	SCF ubiquitin ligase complex
molecular_function	GO:0005515	protein binding