Sed0020906 (gene) Chayote v1

Overview
NameSed0020906
Typegene
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
LocationLG06: 32884697 .. 32891220 (+)
RNA-Seq ExpressionSed0020906
SyntenySed0020906
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAGGTGCATTTGTGAACTTCCGGGAAGTGTACGGTACGTTTTCGATTTCGTATTTTTGAACATTTAGGGTTTTGTTTTGACAATGTAGGTTTAATTGGGGGTTTTCAAATCGAAAGATTAGGGTGCCGATTGTTGAAAGTTTATGCACATGAGGTTGAAAAACTTGTGCAAAAACTTATGCATGGTAGATTAAGGAGCCGATTGTTCATAGTTTATGCACATTAGGTTGATGCATGTATGGTCGGAGGTACGTATGTTAGAAGGGTTCGGTTACGGTTTTGGTTGGAAGTATTTAGGGTAGTAGGGTTCTGTTACAGGTTAGGTTCACTTTTAATTTGTTGCAAGATTGCTGATGAAATCTGGTCATACTGTTAAGTAGTTTAAAAATGGTGTAGCTAAGTTGGTTCATCTGTTTATCAGAGTATTAAAATGGTGAAAGCAGAGAAAGGTGTAGAAAAAAAAAAGACTTCCAGTTAGACGTAGCCAATGAACAATTGGGACGTATGTAGACTATTATGGAAAACAAAAAGTGGACAATACTGTAATTACAATAGGAGAGGTATACTTTGTACGGATCGGGATATGTGTGTTTTTCATTTGTTTTCTGAACCTATGAACTACTCTCTTATTTGTTTGTTTGTTTGTAGACACCAAGCTCATCTGAGGATCTTTGTAGGGAAGAAAATAAGTTAACAGATAGTGAAATGGAAGGAAGTATGGTGTAACAGCCCGGAAATTTCATCCCGGTCTTCTCGGGAGGCCTAGGGGCATTTTGGTAATTTTGGGTCGGGCCGACAGGGCCGGTTATGTAATTGAAAATTGCCAGAAAAATTATGAGTCGATTTGAATAGGATCGGGAATTTTGGTGAAGACATTTGGGCTTGGGAAAAAGTAAAAATAAATAGGGAATTAAATAACGCGTCGAGTGAGATTCAAGCCAGGAGCGTGTCGCGTGCTAGGCAGAGGGCGCTGCCAGTCGAGCCACTGGGCGCGTTTGTTAATCTAAACGCGCGATCTAATACATATCCCTTGTTTCGTGCCTTCGGATTTAAAAGCCAAAATCGCCCGAGCTTCTTCCCCATTTCTTCTTCTTCCTTCGCGAAATTCTCCTCCGACCGACTCACTTTTCCTTCACAATTTCTTCTTTCTCCAGCTCCAATTCGACCGAGTTCCTCTCCCAAATCCGAAGCAAAATCGTGAGCAGCTGGTAAGTTTCTCCTTCTCTTCTTTTCCTTCGCGTTTCCGTCTCCCCTGTTCCGATTTCGAGTTTTCCGGCCGAGTCGAGGTAATTTGAGGTATGGGTTTTGTGCAGCTAGTGTAGGGGAGTTCGCCATCAAAGAATCGCTCGTCGAATCCCCTTGGATCGCTCGATTTTGGGTTTTCTCCATCGCCCCTGTTCGCGCGCAGGAACAGAGCGCTCCGCCGAGCCACGCCGCTCATCGCCTCGCGCCCGCGCGCACGCCTCGCCCAGCTCCGCAACGCGTCGCCCGAGCCCCTGCTCGCCCAGCCGAGCCGCATCGCCCAGTGCCGCTCGTGTCCGCGCGCAACTCGCGCCCCTGCATAGCTAGCATCCGTCCGCGCCCCAGCGCGCCCAGCTAGCCCCGTTGCTGCCCCGTTCGTGCAATCGGCCCGTTCGTGCGTTCGTCGTGCCTCGTGAGTTGCTCCCTAGCTGAGCCTCATTTATTTTATTATATTTAGGCCTATTGTGTGATTTTTGTTGTGATTGATAGGTTCTCGGTAGCTAGTTCGGGTTCGTTCGCCATTTAGGTTTTCATGTCAATTCGTCCCCGACCAAGGTAAGGATTTCTTACCGGAGTTGTGTGGTCCCTGTGATATTATATGTGATTGCTGATTGATTGCTTGTTTGTGTTTATTGACATGTATAGCTAGGTACTCAATTCTGAATTCCCGATTAGCATGTTGTTCCTGATTAATTCTCATGTTAATCCATGCTAGGTTGTTCCTTTCTAGCATGCTCGTATCTGTTCCTTGCTTCGTAGTATCATGCTAGGCTCGTTGTATTCTTATTGAGCACGTATTGGATTTTATGGAATTGTTTGCTTTGTTTGCTAGGGGCAGAGTTAGAGTTGCGGTAGATAGCATCATCCGGGCCGATGCATAAAGTACCTTGCATCCATGGCGGGGGCGTCGAGCAAGTCATTCCGTCCCGGACCTCGTGAGGATTAGCTAACCCAAGCGGTAGGCCCTGCAATCTTGGGTGAGGGTGGCAGTTGTTAATGCCCCAACGGTCGGGATGATGACTTGGCATTGCCTCGTCCTCGGCAGCCGGCATGTCCTCAGCATGTTTGGCAGTAGCCCCTGATTGCCACCTGTTAAGGTAAGGACGGCTTCCTGGTGTAAGCCTACCACAACCGTTCCTTGGCCCCAGGTGCGGTGGTTCAGGCTGACATAGTTTACGTGTCCAGGTCTCACACCCCTATGTCAGTGACACCGATCCAAAGATTTAGTTAGGCGTGGTGACTGGATATGGGCGACTTGTCTTCGACACCCGCAACCCCCATAGTCTGCGAGTGAGCACGCGTGCATGCTTACGCTCATTACAGCGCCGACTGGAGAGCTCCTCGGGATTGTGAGCTAGTGTACCTTTCGTCGACAGTAGACAGGCTGAGGCCGGGACTTGTTTCTCGTATAGGGCGACTTGTGTGGTGATATTATTTCCAGACTAAGACCCTAAATTGGCATCCGAGGCCCAAGTGTGGTCTAAGCTATGTGCTCTATTCTGTGTTTATATTCATAGCTTGCATACGCTCATCGAGATGACCATGTATATCGTATTGTACCCCGGTTGGGGATTCTTACTGAGTAATTCGTTACTCACCCTTATTACTGTGGTTTTTTCCACAGGTAACCAAGTTGCGAGACAGGATGGCTGAAGGAGGAGCTGTGATCATGGGGCCCAGTCTTCCAACTTTGATTTTTGTATTATGACTCTTTATGTTTTGTTTTCCCCTGAATGCATATAGCCGGGCACGGAGCCCTAGGATGTTTTGTAAATATTTGTGGATTCCAGCATTTTGTATCTGAACAGGTTTCGAATGGTTTTTAGTAAATCTCTGATCAGAGTAAACTTTGGAAATGTATTTATCTTGGAACAAGTGCTTGGAAATAGGGACAGGTTCTAGGGAAATTGTCTAGTTTTTAAAGGGGTTATTTTGAATGTTTTTGTTTTAATTGGAATCCGAAATCATGTCTGTTTAAATGTCCTTTACTTTGAATGCATGCATTGGGGTAAGGGCCCATTTAGTGCCCCATTCAGGTCGGTCCCTTACATATGGACACACGAAAAGGAGTTGACGAGGCTTGTGCAGATAAAACAGTACTTTCTGCAAATGTAGTGGCAACTGCTGATATAGAAGTTAGAATGTATTGTAAGGAAATTGTACCATTCAGCTTCGACTTTAAGGTATTTACATAGTAATATAAACAATACTGTTCTGTATTGTTGTAGTTGTAGATGCTTGTTCGTTTAAGTATGTACATTACTTACTGTAGACTTTGGAGGTTGGAAGAACGGAAAAAAAATGTAGAGGAAGTTGTATAAGAGTCTAGTGATGAGGACGAGCACATACAGGGTGATGTTGTTCTAGAAGATGATGTGGAGAATAGGGATATGGGAAACACAAGTGACGAGGTAATGGAATATTGAACTTAATTAAAAAACAATGTTCAATAATTGTTGAGTGAATGTGATTTTGGTTTCTTATTACAAGATGATAACATACCAATAGCACAAAAAAGAAGAAAACAAACAGAAATGAAGGCCATGGCGAACTAGAAAAGAAGAAAAAGGTAACATCTTTGGATACACTGTTTTTTTATGCTTGTCGTACAATGCTGGAATAATTCTAATTTTCATAAATTGTAGTCAAAGCAAATTAACGAGAAGGAAAAGGGGAAAAGAAAGGTGCATGTTGGAGAGGTATATTGATTATACAAAAATATATCTTTGTATATTGGATATTTGTCAATTTTTTGGTTGTATAATGTTCTGAAATGTAGGTTGAAAGTGTACATAGCAAGCGCAAGAAACCGTGTTTGGGTATAGAGGAATCAAATTGGGAAGATACTCCAAAGAAGGTTAAAATATTTATGAACTGTTCTGTTGATACCGTATATTGTATAAATTACTGACGCAAATTAACTGTATGGTACAGTCAAAAGAACATAAATATGATTCGAAAGATGAAATTACTCCGAGTAAGAGAACACGGGCAAGGGCATGGGTTTCAATGCCAAAAAAGGTTCATACATTTCTGTACTGTTTTGCGAGTACCGTATATTGTATAACTTACTTATGCAACTTAACGGTATGGTACAGAAATGAAACGAAGAATACGATTCAGAAGATGAAGGTACTCGTGGTAAGAGATCGCAGACGAGGGCAAGTGTTTCACTGACGAAGAAGAAGGGTGATAAAATAGGGAGCAAATAGAAGGATATTTATGAGGTACATAACATACTGTATATAATTTTAAGTATGGTTTATAAGATGATGAATTTTGATCTAAATGTGTTAACTAAAAACAGGCCGCCCCACTCCTTTAGCCACGGTCTAATTGGAATTTTAAGCAGAAGTTAAATGTTTTTGGAACATTTGACACAATAAAACAAATTAGACATAACTTGACTAATGAACAAATAGTAAAGTTCAGGACATGAGTGTTCGGTAGGTTATTAAATTTATCAATAGCAAGGTTCCAATCCCAAATGTTGAACTCTTTAATCCGTAGAATGTGTAAGTCTCCAAAAAAGGATGAGTTGTGGTTCAACCTAGAAGGAAGAGTTGTTAAATTCGGTATTGGTGAATTCGAGAAAATAATTGGTCTTAATTGTTGCAAAGAGGTTGAGGTGGATGATAGTAAATTCAAGGGGAGGTTCATGAGAAAGTACTTTCCAAATAAAAAATAAATTACTAGGGTGGACATAGTCGAACTCTTCAAGAAGGAAACTACTGTACATGAAAACATATGGTCCGCTTAGCAGAACTGTATTGTTTGGAGTGCTTCATTGACGCAAAGAACTTCAAACAGAATGTGGACAATGTGAGATTTTTACTATTTGAGGATGAAGAACAGTTCAACAAATATAACTGGGGTAGGATAGCCTTCGAGACAACGTTGAAGTATATTAAATCTGGAATCCAACACCCAAACTCTTCGACAATTGGTGTAGGGGGATTCCCGTATGCACTTCTCATTTGGGCATTTGAATGTATTCTTCTGATATCACATGAGTCAAATCTTTTTGTGATCAAATACTCCAATAATGCTAAACTGGGAAAGTGACGAGCAGCCGAAATGGAAGGATTTACAAGAAAAGGTTTTCGAAAACCCCAGGTAAATTTTGTACATACTACTCTATAATATTGTAATAGTGGAATCTGAAAATTAATTATGTTGTTTGTTTAAACTTGTTCAAATGCAGTTCGTGTTTGTTGATATGGATGGAGGTGTTGTTGGTGAGAAGAATGGGAAGGATAGTTAGTCTAGAGAAACTGTAAGTACTATTTAATATTGACAAGACAGTCTTTCATTAATGTATAGTATTATGAATCTGTGATTATTTTGATTTGATAGGATAAGGAAAAGGGTGGAAACTCGAGTGATTTCGATAAATGGTTTGAGGATGAGGTGGGTGAGGCCTATAATGAAATAATGAAAGAACAACCCATATTCGAGGTTGGAGGGACTTCAAAGGGTAATGTTATGGATACTACTAGTGGGGTCCCTACTAATGATGGATTGTTAGGAAGGAACAATGACGAGGATGTGGAATTAACAATGTTCGTGAAGAGGATGCTGAGAACAACATTTACAATACTGTAGTGGCTCTAACCGAGTACATGAAGTCGTCACCGACTGTGTAAATAAACGGTTAGATGAAATGTGGACGATACTGAACAGCATAGCTGATGATGTAAAGGAGTTAAAAGGAGTTGTTAATAATGTTCATGAAAAGGTGGATGATGAAGAGGGTGATGAAAATGAAGGTGATGGTGGAGATCGTTTGGACGAGAACAACAATGAAGGGAAACAAGTTGACAAAGGCAGTAATGGGAATGAAGATTACAACACTGAAAATGCTGGGGCTGAAGATCAAATCAATGAAGGAAAATCAAAGGAAGGGAGAAGCGATAATACAACCAAAGAGGTACAAAAAGTGTTTATAATGCAGTGTTATTATATATATACATGTACTTCAATTTCAATGTTATCAGGTGCCACAGGCGGAGGAGTTCATTCAAAGTGTTGTTCAATATGGGCCAGGGATTTATATTGATGCGGTATATACCATATTATTTAAAGTGTATTGTATGGATACTTTACTTTACTGTATACATTAATAATGAAACTTTGATCTCTAGTGTTGCAGCTGAAGGGACAAGGGATGTTTTTAGATACCCAAATTGCTAAGTGGGAAGCAAGAAAAAAGAAGCCGTCAAAATGCATGCTCTCTCCTAAGTTTGGGTCGGTAGAGGAGAAGAAGGAGAAAAAGTAA

mRNA sequence

ATGAAGAGGTGCATTTGTGAACTTCCGGGAAGTGTACGTGATGAGGACGAGCACATACAGGGTGATGTTGTTCTAGAAGATGATGTGGAGAATAGGGATATGGGAAACACAAGTGACGAGTCAAAGCAAATTAACGAGAAGGAAAAGGGGAAAAGAAAGGTGCATGTTGGAGAGGTTGAAAGTGTACATAGCAAGCGCAAGAAACCGTGTTTGGGTATAGAGGAATCAAATTGGGAAGATACTCCAAAGAAGGATAAGGAAAAGGGTGGAAACTCGAGTGATTTCGATAAATGGTTTGAGGATGAGGTGGGTGAGGCCTATAATGAAATAATGAAAGAACAACCCATATTCGAGGTTGGAGGGACTTCAAAGGGTAATGTTATGGATACTACTAGTGGGGTCCCTACTAATGATGGATTGTTAGGAAGGAACAATGACGAGGATGTGGAATTAACAATTGGCTCTAACCGAGTACATGAAGTCGTCACCGACTGTGTAAATAAACGGTTAGATGAAATGTGGACGATACTGAACAGCATAGCTGATGATGTAAAGGAGTTAAAAGGAGTTGTTAATAATGTTCATGAAAAGGTGGATGATGAAGAGGGTGATGAAAATGAAGGTGATGGTGGAGATCGTTTGGACGAGAACAACAATGAAGGGAAACAAGTTGACAAAGGCAGTAATGGGAATGAAGATTACAACACTGAAAATGCTGGGGCTGAAGATCAAATCAATGAAGGAAAATCAAAGGAAGGGAGAAGCGATAATACAACCAAAGAGGTGCCACAGGCGGAGGAGTTCATTCAAAGTGTTGTTCAATATGGGCCAGGGATTTATATTGATGCGCTGAAGGGACAAGGGATGTTTTTAGATACCCAAATTGCTAAGTGGGAAGCAAGAAAAAAGAAGCCGTCAAAATGCATGCTCTCTCCTAAGTTTGGGTCGGTAGAGGAGAAGAAGGAGAAAAAGTAA

Coding sequence (CDS)

ATGAAGAGGTGCATTTGTGAACTTCCGGGAAGTGTACGTGATGAGGACGAGCACATACAGGGTGATGTTGTTCTAGAAGATGATGTGGAGAATAGGGATATGGGAAACACAAGTGACGAGTCAAAGCAAATTAACGAGAAGGAAAAGGGGAAAAGAAAGGTGCATGTTGGAGAGGTTGAAAGTGTACATAGCAAGCGCAAGAAACCGTGTTTGGGTATAGAGGAATCAAATTGGGAAGATACTCCAAAGAAGGATAAGGAAAAGGGTGGAAACTCGAGTGATTTCGATAAATGGTTTGAGGATGAGGTGGGTGAGGCCTATAATGAAATAATGAAAGAACAACCCATATTCGAGGTTGGAGGGACTTCAAAGGGTAATGTTATGGATACTACTAGTGGGGTCCCTACTAATGATGGATTGTTAGGAAGGAACAATGACGAGGATGTGGAATTAACAATTGGCTCTAACCGAGTACATGAAGTCGTCACCGACTGTGTAAATAAACGGTTAGATGAAATGTGGACGATACTGAACAGCATAGCTGATGATGTAAAGGAGTTAAAAGGAGTTGTTAATAATGTTCATGAAAAGGTGGATGATGAAGAGGGTGATGAAAATGAAGGTGATGGTGGAGATCGTTTGGACGAGAACAACAATGAAGGGAAACAAGTTGACAAAGGCAGTAATGGGAATGAAGATTACAACACTGAAAATGCTGGGGCTGAAGATCAAATCAATGAAGGAAAATCAAAGGAAGGGAGAAGCGATAATACAACCAAAGAGGTGCCACAGGCGGAGGAGTTCATTCAAAGTGTTGTTCAATATGGGCCAGGGATTTATATTGATGCGCTGAAGGGACAAGGGATGTTTTTAGATACCCAAATTGCTAAGTGGGAAGCAAGAAAAAAGAAGCCGTCAAAATGCATGCTCTCTCCTAAGTTTGGGTCGGTAGAGGAGAAGAAGGAGAAAAAGTAA

Protein sequence

MKRCICELPGSVRDEDEHIQGDVVLEDDVENRDMGNTSDESKQINEKEKGKRKVHVGEVESVHSKRKKPCLGIEESNWEDTPKKDKEKGGNSSDFDKWFEDEVGEAYNEIMKEQPIFEVGGTSKGNVMDTTSGVPTNDGLLGRNNDEDVELTIGSNRVHEVVTDCVNKRLDEMWTILNSIADDVKELKGVVNNVHEKVDDEEGDENEGDGGDRLDENNNEGKQVDKGSNGNEDYNTENAGAEDQINEGKSKEGRSDNTTKEVPQAEEFIQSVVQYGPGIYIDALKGQGMFLDTQIAKWEARKKKPSKCMLSPKFGSVEEKKEKK
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 231..251
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 15..96
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 302..324
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 195..263
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 244..261
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 223..243

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0020906.1Sed0020906.1mRNA