Sed0020873 (gene) Chayote v1

Overview


Name	Sed0020873
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Adenine nucleotide alpha hydrolases-like superfamily protein
Location	LG02: 50417533 .. 50419145 (+)
RNA-Seq Expression	Sed0020873
Synteny	Sed0020873

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAGCGGCGACGTCGAGGGTTGAATTGGAAGGAAAAGACAAAGCCGCCATGATTATTGCTCAAACCATAGCTCTCGGTGTTGATCTGCACAGCAATCTTAGGGTTTGTCTTCTTCCCTTCACATCAAAATCTCTCGGCATTAATGTTTCTCTCAAGTTTTAATTGCATTTTGGTCAATGAATTGTATTGTTCTGCTTTGATTTTGGAGCTTTCTTAGCTCCGAAACTGACTTTTGGTCCCTGTTTAGTAGATGTATGAGACTTTTGAATATGCATATTAATTTCCTGATATGAGTATGTATTGAAGACAACCACTCCGGATTGGCATCGTTGTCAATGAAGAGGCAGGCTTGTTCAATGAGAATAATCAAAAAGGAAAAAAAATAAAATATGTAAGCTAGGTCGGTTGAGCATGTATAGACCTGTTGACTTAGAGTATATATTGGAGCCAAGTAGGTTAGGTTGGTTTGAGATAATGTGTATTTACTTGTTGATTTGAGTATGTATTGTAGTCAAGTCACATTGCTTAGGTTGGTCCAGAAAATTTGTGTTGACTTGTTGTTTAGTTTAGCATACGTATTGGAATCCAGTAGGTTAGGTTGGTTAAGATGGATGTTCGGTAGAGAGAAACTAATGAAATGACGAAATAAAGACGAAGACACAATTTGAAATAGATCGGGTTTCCTTGATATCCAAATGTGGTAGGATCAAACGGTATCTTTTGTGAGAGCAGTTGACTGCACATATGTTTGCCTGGATACTTGTGGATAAAAAAAAAACTTTGATACCCAAAACAAGATAAGGTCCTCATGAGGTGGTGCGGTAGTCAAAGGCTTGAGCTTTCAAGGTGTGCTCTCCTCAATATCTCAATTCTCATGTTCGAGACTCACTTGTGACATTAATTTGTAGATACCTCCCATGTCTTCATTCCTTCTATGTTTCTTGATGCCTGGCTTGGTATAGCGGAGTGAAGCTCTGATTTCCCGGTTTACAAAAAGAAAAAAACAAGATAAGTTTTCTGTGTCCTATCAAAAAAAAAACCAAAACACGTTAATCTTACTCTATGAAATCTTAAAATACCTGAATACAGTTGTGAAATTAATACCCTCAATTGGTTGAGTAATTTTCTTGAAGAACCATGGCTACATGCTGAGTGTTTCTGCAGTTAGGCTTAGGACTTGGGGTGAGAATAGTGCTACAAGTGTATATTTGATATCTGTTTTTGGTTGGGCAGAATCGTTTTTGTGTATAGGTTGGATTTGTTCTGCTTCTTTTGGACCTGTTTGTGACATGGGACTTTTTGGAATTGAATATTGGAAGTTTATAGTTGATTGGCCTCAGGATCGTTTTTATCATTTTTTAATAAAACATTGTATTGTGTTGTGTAGATAAAAGGGTTGGAATGAAACTAACGAACTATAAATTATGTTGAAGTTGTCCAACTTAAGATAATTGATCATCTTGTTGATTGTGAAATTATGAAATGCAGATATAAACGGTCAGTTGATTGAAAACAGCAAATGCACTTGTGTTGCCGTACAAAAGAAGGGTCAAAATGCAGGCTATCTTTTGAGCACCAAAACCCACAAAAACTTCTGGCTGTTGGCTTGA

mRNA sequence

ATGAAAGCGGCGACGTCGAGGGTTGAATTGGAAGGAAAAGACAAAGCCGCCATGATTATTGCTCAAACCATAGCTCTCGGTGTTGATCTGCACAGCAATCTTAGGGTTTGTCTTCTTCCCTTCACATCAAAATCTCTCGGCATTAATTTGATTGAAAACAGCAAATGCACTTGTGTTGCCGTACAAAAGAAGGGTCAAAATGCAGGCTATCTTTTGAGCACCAAAACCCACAAAAACTTCTGGCTGTTGGCTTGA

Coding sequence (CDS)

ATGAAAGCGGCGACGTCGAGGGTTGAATTGGAAGGAAAAGACAAAGCCGCCATGATTATTGCTCAAACCATAGCTCTCGGTGTTGATCTGCACAGCAATCTTAGGGTTTGTCTTCTTCCCTTCACATCAAAATCTCTCGGCATTAATTTGATTGAAAACAGCAAATGCACTTGTGTTGCCGTACAAAAGAAGGGTCAAAATGCAGGCTATCTTTTGAGCACCAAAACCCACAAAAACTTCTGGCTGTTGGCTTGA

Protein sequence

MKAATSRVELEGKDKAAMIIAQTIALGVDLHSNLRVCLLPFTSKSLGINLIENSKCTCVAVQKKGQNAGYLLSTKTHKNFWLLA

Homology

[Close]

BLAST of Sed0020873 vs. NCBI nr
Match: XP_038881793.1 (homeobox protein 5 [Benincasa hispida])

HSP 1 Score: 101.7 bits (252), Expect = 3.2e-18
Identity = 59/99 (59.60%), Postives = 69/99 (69.70%), Query Frame = 0


Query: 1   MKAATSRVELEGKDKAAMIIAQTIALGVDL-----HSNLRVCLLPF--------TSKSLG 60
           +K  T RVELEGKDKA+MI+AQT ALG+DL       +L   +L +         +K L 
Sbjct: 126 LKVGTLRVELEGKDKASMIMAQTKALGIDLLVIGQRRSLSTAILGYRRSGGPMKAAKMLD 185

Query: 61  I--NLIENSKCTCVAVQKKGQNAGYLLSTKTHKNFWLLA 85
               LIENSKCTCVAVQKKGQNAGYLL+TKTH+NFWLLA
Sbjct: 186 TAEYLIENSKCTCVAVQKKGQNAGYLLNTKTHRNFWLLA 224

[Close]

BLAST of Sed0020873 vs. NCBI nr
Match: KAG7028797.1 (hypothetical protein SDJN02_09978, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 100.9 bits (250), Expect = 5.5e-18
Identity = 58/97 (59.79%), Postives = 68/97 (70.10%), Query Frame = 0


Query: 1   MKAATSRVELEGKDKAAMIIAQTIALGVDL-----HSNLRVCLLPFTSKSLGI------- 60
           +K  T+RVELEGKDKAAMI+AQT AL +DL       +L   +L +  K  G+       
Sbjct: 117 LKVRTARVELEGKDKAAMIMAQTKALDIDLLVIGQRRSLSTAILGY--KRAGVAKMLDTA 176

Query: 61  -NLIENSKCTCVAVQKKGQNAGYLLSTKTHKNFWLLA 85
             LIENS CTCVAVQKKGQNAGYLL+TKTH+NFWLLA
Sbjct: 177 EYLIENSNCTCVAVQKKGQNAGYLLNTKTHRNFWLLA 211

[Close]

BLAST of Sed0020873 vs. NCBI nr
Match: KAG6597331.1 (hypothetical protein SDJN03_10511, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 100.9 bits (250), Expect = 5.5e-18
Identity = 58/97 (59.79%), Postives = 68/97 (70.10%), Query Frame = 0


Query: 1   MKAATSRVELEGKDKAAMIIAQTIALGVDL-----HSNLRVCLLPFTSKSLGI------- 60
           +K  T+RVELEGKDKAAMI+AQT AL +DL       +L   +L +  K  G+       
Sbjct: 117 LKVRTARVELEGKDKAAMIMAQTKALDIDLLVIGQRRSLSTAILGY--KRAGVAKMLDTA 176

Query: 61  -NLIENSKCTCVAVQKKGQNAGYLLSTKTHKNFWLLA 85
             LIENS CTCVAVQKKGQNAGYLL+TKTH+NFWLLA
Sbjct: 177 EYLIENSNCTCVAVQKKGQNAGYLLNTKTHRNFWLLA 211

[Close]

BLAST of Sed0020873 vs. NCBI nr
Match: XP_008438448.1 (PREDICTED: uncharacterized protein LOC103483538 [Cucumis melo] >KAA0049204.1 uncharacterized protein E6C27_scaffold171G004420 [Cucumis melo var. makuwa] >TYK17355.1 uncharacterized protein E5676_scaffold434G002120 [Cucumis melo var. makuwa])

HSP 1 Score: 100.5 bits (249), Expect = 7.2e-18
Identity = 57/99 (57.58%), Postives = 67/99 (67.68%), Query Frame = 0


Query: 1   MKAATSRVELEGKDKAAMIIAQTIALGVDL-----HSNLRVCLLPFTSKSLGIN------ 60
           +K  T RVELEGKDKA+MI+AQT +LGVDL       +L   +L +      +       
Sbjct: 117 VKVGTLRVELEGKDKASMIMAQTKSLGVDLLVIGQRRSLSTAILGYRRTGGAMKGAKMLD 176

Query: 61  ----LIENSKCTCVAVQKKGQNAGYLLSTKTHKNFWLLA 85
               LIENSKCTCVAVQKKGQNAGYLL+TKTH+NFWLLA
Sbjct: 177 TAEYLIENSKCTCVAVQKKGQNAGYLLNTKTHRNFWLLA 215

[Close]

BLAST of Sed0020873 vs. NCBI nr
Match: XP_022974544.1 (uncharacterized protein LOC111473211 isoform X1 [Cucurbita maxima] >XP_022974545.1 uncharacterized protein LOC111473211 isoform X2 [Cucurbita maxima])

HSP 1 Score: 100.1 bits (248), Expect = 9.4e-18
Identity = 57/97 (58.76%), Postives = 68/97 (70.10%), Query Frame = 0


Query: 1   MKAATSRVELEGKDKAAMIIAQTIALGVDL-----HSNLRVCLLPFTSKSLGI------- 60
           +K  T+RVE+EGKDKAAMI+AQT AL +DL       +L   +L +  K  G+       
Sbjct: 117 LKVRTARVEMEGKDKAAMIMAQTKALDIDLLVIGQRRSLSTAILGY--KRAGVVKMLDTA 176

Query: 61  -NLIENSKCTCVAVQKKGQNAGYLLSTKTHKNFWLLA 85
             LIENS CTCVAVQKKGQNAGYLL+TKTH+NFWLLA
Sbjct: 177 EYLIENSNCTCVAVQKKGQNAGYLLNTKTHRNFWLLA 211

[Close]

BLAST of Sed0020873 vs. ExPASy TrEMBL
Match: A0A5A7U1M3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G002120 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 3.5e-18
Identity = 57/99 (57.58%), Postives = 67/99 (67.68%), Query Frame = 0


Query: 1   MKAATSRVELEGKDKAAMIIAQTIALGVDL-----HSNLRVCLLPFTSKSLGIN------ 60
           +K  T RVELEGKDKA+MI+AQT +LGVDL       +L   +L +      +       
Sbjct: 117 VKVGTLRVELEGKDKASMIMAQTKSLGVDLLVIGQRRSLSTAILGYRRTGGAMKGAKMLD 176

Query: 61  ----LIENSKCTCVAVQKKGQNAGYLLSTKTHKNFWLLA 85
               LIENSKCTCVAVQKKGQNAGYLL+TKTH+NFWLLA
Sbjct: 177 TAEYLIENSKCTCVAVQKKGQNAGYLLNTKTHRNFWLLA 215

[Close]

BLAST of Sed0020873 vs. ExPASy TrEMBL
Match: A0A1S3AWE0 (uncharacterized protein LOC103483538 OS=Cucumis melo OX=3656 GN=LOC103483538 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 3.5e-18
Identity = 57/99 (57.58%), Postives = 67/99 (67.68%), Query Frame = 0


Query: 1   MKAATSRVELEGKDKAAMIIAQTIALGVDL-----HSNLRVCLLPFTSKSLGIN------ 60
           +K  T RVELEGKDKA+MI+AQT +LGVDL       +L   +L +      +       
Sbjct: 117 VKVGTLRVELEGKDKASMIMAQTKSLGVDLLVIGQRRSLSTAILGYRRTGGAMKGAKMLD 176

Query: 61  ----LIENSKCTCVAVQKKGQNAGYLLSTKTHKNFWLLA 85
               LIENSKCTCVAVQKKGQNAGYLL+TKTH+NFWLLA
Sbjct: 177 TAEYLIENSKCTCVAVQKKGQNAGYLLNTKTHRNFWLLA 215

[Close]

BLAST of Sed0020873 vs. ExPASy TrEMBL
Match: A0A6J1IE79 (uncharacterized protein LOC111473211 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111473211 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 4.5e-18
Identity = 57/97 (58.76%), Postives = 68/97 (70.10%), Query Frame = 0


Query: 1   MKAATSRVELEGKDKAAMIIAQTIALGVDL-----HSNLRVCLLPFTSKSLGI------- 60
           +K  T+RVE+EGKDKAAMI+AQT AL +DL       +L   +L +  K  G+       
Sbjct: 117 LKVRTARVEMEGKDKAAMIMAQTKALDIDLLVIGQRRSLSTAILGY--KRAGVVKMLDTA 176

Query: 61  -NLIENSKCTCVAVQKKGQNAGYLLSTKTHKNFWLLA 85
             LIENS CTCVAVQKKGQNAGYLL+TKTH+NFWLLA
Sbjct: 177 EYLIENSNCTCVAVQKKGQNAGYLLNTKTHRNFWLLA 211

[Close]

BLAST of Sed0020873 vs. ExPASy TrEMBL
Match: A0A0A0L6Y4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G134530 PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 7.7e-18
Identity = 56/99 (56.57%), Postives = 67/99 (67.68%), Query Frame = 0


Query: 1   MKAATSRVELEGKDKAAMIIAQTIALGVDL-----HSNLRVCLLPFTSKSLGIN------ 60
           ++  T RVELEGKDKA+MI+AQT +LGVDL       +L   +L +      +       
Sbjct: 117 LEVGTLRVELEGKDKASMIMAQTKSLGVDLLVIGQRRSLSTAILGYRRTGGAMKGAKMLD 176

Query: 61  ----LIENSKCTCVAVQKKGQNAGYLLSTKTHKNFWLLA 85
               LIENSKCTCVAVQKKGQNAGYLL+TKTH+NFWLLA
Sbjct: 177 TAEYLIENSKCTCVAVQKKGQNAGYLLNTKTHRNFWLLA 215

[Close]

BLAST of Sed0020873 vs. ExPASy TrEMBL
Match: A0A6J1FDQ7 (uncharacterized protein LOC111444812 OS=Cucurbita moschata OX=3662 GN=LOC111444812 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 1.3e-17
Identity = 57/97 (58.76%), Postives = 67/97 (69.07%), Query Frame = 0


Query: 1   MKAATSRVELEGKDKAAMIIAQTIALGVDL-----HSNLRVCLLPFTSKSLGI------- 60
           +K   +RVELEGKDKAAMI+AQT AL +DL       +L   +L +  K  G+       
Sbjct: 117 LKVRMARVELEGKDKAAMIMAQTKALDIDLLVIGQRRSLSTAILGY--KRAGVAKMLDTA 176

Query: 61  -NLIENSKCTCVAVQKKGQNAGYLLSTKTHKNFWLLA 85
             LIENS CTCVAVQKKGQNAGYLL+TKTH+NFWLLA
Sbjct: 177 EYLIENSNCTCVAVQKKGQNAGYLLNTKTHRNFWLLA 211

[Close]

BLAST of Sed0020873 vs. TAIR 10
Match: AT4G13450.1 (Adenine nucleotide alpha hydrolases-like superfamily protein )

HSP 1 Score: 69.3 bits (168), Expect = 1.6e-12
Identity = 30/35 (85.71%), Postives = 32/35 (91.43%), Query Frame = 0


Query: 50  LIENSKCTCVAVQKKGQNAGYLLSTKTHKNFWLLA 85
           LIENSKCTCV V KKGQN GY+L+TKTHKNFWLLA
Sbjct: 185 LIENSKCTCVGVTKKGQNGGYVLNTKTHKNFWLLA 219

[Close]

BLAST of Sed0020873 vs. TAIR 10
Match: AT2G03720.1 (Adenine nucleotide alpha hydrolases-like superfamily protein )

HSP 1 Score: 51.6 bits (122), Expect = 3.6e-07
Identity = 21/34 (61.76%), Postives = 26/34 (76.47%), Query Frame = 0


Query: 51  IENSKCTCVAVQKKGQNAGYLLSTKTHKNFWLLA 85
           I NS C  +AV+KK  N GYL++TK HK+FWLLA
Sbjct: 132 IHNSDCMAIAVRKKSNNGGYLITTKRHKDFWLLA 165

[Close]

BLAST of Sed0020873 vs. TAIR 10
Match: AT1G69080.1 (Adenine nucleotide alpha hydrolases-like superfamily protein )

HSP 1 Score: 45.8 bits (107), Expect = 2.0e-05
Identity = 22/46 (47.83%), Postives = 28/46 (60.87%), Query Frame = 0


Query: 40  PFTSKSLGINLIENSKCTCVAVQKKGQN-AGYLLSTKTHKNFWLLA 85
           P T        I NS C  +AV+K+G+   GY L+TK HK+FWLLA
Sbjct: 178 PVTKHDFVEYCINNSPCMAIAVRKRGKKLGGYTLTTKRHKDFWLLA 223

[Close]

BLAST of Sed0020873 vs. TAIR 10
Match: AT1G69080.2 (Adenine nucleotide alpha hydrolases-like superfamily protein )

HSP 1 Score: 45.4 bits (106), Expect = 2.5e-05
Identity = 33/98 (33.67%), Postives = 48/98 (48.98%), Query Frame = 0


Query: 2   KAATSRVELEGKDKAAMII-------AQTIALG-VDLHSNLRVCLL------PFTSKSLG 61
           K  T  V ++G +K   I+       A  + LG    H+  R+ ++      P T     
Sbjct: 112 KVKTEVVFVKGDEKGPTIVKEAREREASLLVLGQKKQHATWRLLMVWASQARPVTKHDFV 171

Query: 62  INLIENSKCTCVAVQKKGQN-AGYLLSTKTHKNFWLLA 85
              I NS C  +AV+K+G+   GY L+TK HK+FWLLA
Sbjct: 172 EYCINNSPCMAIAVRKRGKKLGGYTLTTKRHKDFWLLA 209

[Close]

BLAST of Sed0020873 vs. TAIR 10
Match: AT5G17390.1 (Adenine nucleotide alpha hydrolases-like superfamily protein )

HSP 1 Score: 44.7 bits (104), Expect = 4.3e-05
Identity = 19/35 (54.29%), Postives = 26/35 (74.29%), Query Frame = 0


Query: 51  IENSKCTCVAVQKKGQN-AGYLLSTKTHKNFWLLA 85
           +EN+ C  +AV+ K +   GYL++TK HKNFWLLA
Sbjct: 251 LENASCMTIAVKPKNRKLGGYLITTKRHKNFWLLA 285

The following BLAST results are available for this feature:

BLAST of Sed0020873 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038881793.1	3.2e-18	59.60	homeobox protein 5 [Benincasa hispida]	[more]
KAG7028797.1	5.5e-18	59.79	hypothetical protein SDJN02_09978, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6597331.1	5.5e-18	59.79	hypothetical protein SDJN03_10511, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_008438448.1	7.2e-18	57.58	PREDICTED: uncharacterized protein LOC103483538 [Cucumis melo] >KAA0049204.1 unc...	[more]
XP_022974544.1	9.4e-18	58.76	uncharacterized protein LOC111473211 isoform X1 [Cucurbita maxima] >XP_022974545...	[more]

BLAST of Sed0020873 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0020873 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U1M3	3.5e-18	57.58	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3AWE0	3.5e-18	57.58	uncharacterized protein LOC103483538 OS=Cucumis melo OX=3656 GN=LOC103483538 PE=...	[more]
A0A6J1IE79	4.5e-18	58.76	uncharacterized protein LOC111473211 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A0A0L6Y4	7.7e-18	56.57	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G134530 PE=4 SV=1	[more]
A0A6J1FDQ7	1.3e-17	58.76	uncharacterized protein LOC111444812 OS=Cucurbita moschata OX=3662 GN=LOC1114448...	[more]

BLAST of Sed0020873 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G13450.1	1.6e-12	85.71	Adenine nucleotide alpha hydrolases-like superfamily protein	[more]
AT2G03720.1	3.6e-07	61.76	Adenine nucleotide alpha hydrolases-like superfamily protein	[more]
AT1G69080.1	2.0e-05	47.83	Adenine nucleotide alpha hydrolases-like superfamily protein	[more]
AT1G69080.2	2.5e-05	33.67	Adenine nucleotide alpha hydrolases-like superfamily protein	[more]
AT5G17390.1	4.3e-05	54.29	Adenine nucleotide alpha hydrolases-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR47867	ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN	coord: 2..84

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0020873.1	Sed0020873.1	mRNA