Sed0020871 (gene) Chayote v1

Overview
NameSed0020871
Typegene
OrganismSechium edule (Chayote v1)
Descriptionstress-response A/B barrel domain-containing protein UP3-like
LocationLG03: 12061562 .. 12062584 (+)
RNA-Seq ExpressionSed0020871
SyntenySed0020871
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GCGTTTTAATTTGTATTTGTTTATGGTTCGTTGGTGGTGCTGAGCGCATCACGTCCTTGTCGCCCAATTTTCTCAATATTTCATTTTTTTCAAAATTCCGCCCTAAAATGCTGTCCGTCGCTCTCCGATCATTCTCCGCCCTTCCTTCCAAAACCCTCCGCCTCCGCCACCGCCGGAACCCTAATTTTCCCTCTTTCAAACCCTTCTCCGTCAAAATGTCCTCCCAAACCCAACCGATCGAACACACCGTCCTCTTCAAGCTCAAAGACGGCGTCGATTCCTCCAAGATCGCCGCCATGCTCTCCGGCCTCAACGGCCTCGTCTCTCTCGACCCGGTCCTCCACCTCTCCGCCGGTCCCCTCCTCCGCAACCGCTCCGCCGCCGCCAACTTCACTCACCTCCTCCACAGCCGCTACGCTTCCAAAGAGGAACTGTCACTTTACTCCGCGCATCCTAGCCATGTGAGCGTCGTCAAGGAATGCGTTCTCCCCATCTGCGACGACATCATGGCCGTCGATTGGGTCGCCGATGATCTCCAAGGCCCCGTTGTTGCACCGCCGGGCTCGGTCGTCCGAGTCACGTTCCTGAAACTGAAGGAGGATCTGGGCGAGGAGGTTAAGCGCGAGGTCTTGGAGGTTGTTGCTGGGTTGAGGGATAAATTGGGGCCGAATGTACAGCTGACTGTGGGCGAGAACTTTTCCCCTGCTAGAGCTAAGGGGTTTTCAATCGCTTCGATTGCTGTTTTTCCTGGGGTGAAGGAGTTGGAGGCGGTGGATTCTGATCAAGAAATGGCGGAATTGCAGAAGGAGAAGGTTCGGGAGCGTTTGGAGAGTGTGATTGTGGTGGATTATGTAGTTCCGCCGCCGCATACGGCGAGCCTGTAAGTCCCTGCCCTGTCACTTTAAATTTCTGATGAACAATGAATAACAAAAGCTGTATGTTGATCAGATTCGCTTTTGCAATGTTAGCATTTTGATGTCTTTGAGTTTCTGCTCTGTTTATGTTACTCATTATCAGTCCTAT

mRNA sequence

GCGTTTTAATTTGTATTTGTTTATGGTTCGTTGGTGGTGCTGAGCGCATCACGTCCTTGTCGCCCAATTTTCTCAATATTTCATTTTTTTCAAAATTCCGCCCTAAAATGCTGTCCGTCGCTCTCCGATCATTCTCCGCCCTTCCTTCCAAAACCCTCCGCCTCCGCCACCGCCGGAACCCTAATTTTCCCTCTTTCAAACCCTTCTCCGTCAAAATGTCCTCCCAAACCCAACCGATCGAACACACCGTCCTCTTCAAGCTCAAAGACGGCGTCGATTCCTCCAAGATCGCCGCCATGCTCTCCGGCCTCAACGGCCTCGTCTCTCTCGACCCGGTCCTCCACCTCTCCGCCGGTCCCCTCCTCCGCAACCGCTCCGCCGCCGCCAACTTCACTCACCTCCTCCACAGCCGCTACGCTTCCAAAGAGGAACTGTCACTTTACTCCGCGCATCCTAGCCATGTGAGCGTCGTCAAGGAATGCGTTCTCCCCATCTGCGACGACATCATGGCCGTCGATTGGGTCGCCGATGATCTCCAAGGCCCCGTTGTTGCACCGCCGGGCTCGGTCGTCCGAGTCACGTTCCTGAAACTGAAGGAGGATCTGGGCGAGGAGGTTAAGCGCGAGGTCTTGGAGGTTGTTGCTGGGTTGAGGGATAAATTGGGGCCGAATGTACAGCTGACTGTGGGCGAGAACTTTTCCCCTGCTAGAGCTAAGGGGTTTTCAATCGCTTCGATTGCTGTTTTTCCTGGGGTGAAGGAGTTGGAGGCGGTGGATTCTGATCAAGAAATGGCGGAATTGCAGAAGGAGAAGGTTCGGGAGCGTTTGGAGAGTGTGATTGTGGTGGATTATGTAGTTCCGCCGCCGCATACGGCGAGCCTGTAAGTCCCTGCCCTGTCACTTTAAATTTCTGATGAACAATGAATAACAAAAGCTGTATGTTGATCAGATTCGCTTTTGCAATGTTAGCATTTTGATGTCTTTGAGTTTCTGCTCTGTTTATGTTACTCATTATCAGTCCTAT

Coding sequence (CDS)

ATGCTGTCCGTCGCTCTCCGATCATTCTCCGCCCTTCCTTCCAAAACCCTCCGCCTCCGCCACCGCCGGAACCCTAATTTTCCCTCTTTCAAACCCTTCTCCGTCAAAATGTCCTCCCAAACCCAACCGATCGAACACACCGTCCTCTTCAAGCTCAAAGACGGCGTCGATTCCTCCAAGATCGCCGCCATGCTCTCCGGCCTCAACGGCCTCGTCTCTCTCGACCCGGTCCTCCACCTCTCCGCCGGTCCCCTCCTCCGCAACCGCTCCGCCGCCGCCAACTTCACTCACCTCCTCCACAGCCGCTACGCTTCCAAAGAGGAACTGTCACTTTACTCCGCGCATCCTAGCCATGTGAGCGTCGTCAAGGAATGCGTTCTCCCCATCTGCGACGACATCATGGCCGTCGATTGGGTCGCCGATGATCTCCAAGGCCCCGTTGTTGCACCGCCGGGCTCGGTCGTCCGAGTCACGTTCCTGAAACTGAAGGAGGATCTGGGCGAGGAGGTTAAGCGCGAGGTCTTGGAGGTTGTTGCTGGGTTGAGGGATAAATTGGGGCCGAATGTACAGCTGACTGTGGGCGAGAACTTTTCCCCTGCTAGAGCTAAGGGGTTTTCAATCGCTTCGATTGCTGTTTTTCCTGGGGTGAAGGAGTTGGAGGCGGTGGATTCTGATCAAGAAATGGCGGAATTGCAGAAGGAGAAGGTTCGGGAGCGTTTGGAGAGTGTGATTGTGGTGGATTATGTAGTTCCGCCGCCGCATACGGCGAGCCTGTAA

Protein sequence

MLSVALRSFSALPSKTLRLRHRRNPNFPSFKPFSVKMSSQTQPIEHTVLFKLKDGVDSSKIAAMLSGLNGLVSLDPVLHLSAGPLLRNRSAAANFTHLLHSRYASKEELSLYSAHPSHVSVVKECVLPICDDIMAVDWVADDLQGPVVAPPGSVVRVTFLKLKEDLGEEVKREVLEVVAGLRDKLGPNVQLTVGENFSPARAKGFSIASIAVFPGVKELEAVDSDQEMAELQKEKVRERLESVIVVDYVVPPPHTASL
Homology
BLAST of Sed0020871 vs. NCBI nr
Match: XP_038889133.1 (stress-response A/B barrel domain-containing protein UP3 [Benincasa hispida])

HSP 1 Score: 381.3 bits (978), Expect = 6.5e-102
Identity = 197/258 (76.36%), Postives = 226/258 (87.60%), Query Frame = 0

Query: 1   MLSVALRSFSALPSKTLRLRHRRNPNFPSFKPFSVKMSSQTQPIEHTVLFKLKDGVDSSK 60
           MLS ALRSFS LPS +  LR RR    PSF+PFSV MS+ TQPIEH VLFK+KDG+DSSK
Sbjct: 1   MLSSALRSFSTLPSTSRHLRLRRLNPSPSFRPFSVNMSAHTQPIEHVVLFKVKDGLDSSK 60

Query: 61  IAAMLSGLNGLVSLDPVLHLSAGPLLRNRSAAANFTHLLHSRYASKEELSLYSAHPSHVS 120
           +  ML+GLNGL+SLD VLH++AGP+LRNRS+++ FTHLLHSRY+SKE+LS+YSAHP+H +
Sbjct: 61  VNDMLTGLNGLISLDQVLHITAGPILRNRSSSSTFTHLLHSRYSSKEDLSIYSAHPAHTN 120

Query: 121 VVKECVLPICDDIMAVDWVADDLQGPVVAPPGSVVRVTFLKLKEDLGEEVKREVLEVVAG 180
           VVK+ VLPICDDIMAVDWVAD L+GP+VAP GS +R+TFLKLKE+LGEEVK E+LEV+AG
Sbjct: 121 VVKQFVLPICDDIMAVDWVADALKGPIVAPSGSALRLTFLKLKENLGEEVKSEILEVIAG 180

Query: 181 LRDKLGPNVQLTVGENFSPARAKGFSIASIAVFPGVKELEAVDSDQEMAELQKEKVRERL 240
           LR+KLGPNVQLTVGENFSPARAKGFSIASIA+FPG  ELEA  SDQEM ELQKEKVRE L
Sbjct: 181 LREKLGPNVQLTVGENFSPARAKGFSIASIAIFPGPNELEAAVSDQEMVELQKEKVREHL 240

Query: 241 ESVIVVDYVVPPPHTASL 259
           ESVIVVDYVV  P TASL
Sbjct: 241 ESVIVVDYVV--PQTASL 256

BLAST of Sed0020871 vs. NCBI nr
Match: XP_011648585.1 (stress-response A/B barrel domain-containing protein UP3 [Cucumis sativus] >KGN60510.1 hypothetical protein Csa_019495 [Cucumis sativus])

HSP 1 Score: 376.3 bits (965), Expect = 2.1e-100
Identity = 192/258 (74.42%), Postives = 225/258 (87.21%), Query Frame = 0

Query: 1   MLSVALRSFSALPSKTLRLRHRRNPNFPSFKPFSVKMSSQTQPIEHTVLFKLKDGVDSSK 60
           MLS ALR+ + LPS +  LR  R    PS +PFSVKMS+ TQPIEH VLFK+K+G+DSSK
Sbjct: 25  MLSSALRTLTTLPSTSRNLRLLRLNPCPSSRPFSVKMSAHTQPIEHIVLFKVKEGIDSSK 84

Query: 61  IAAMLSGLNGLVSLDPVLHLSAGPLLRNRSAAANFTHLLHSRYASKEELSLYSAHPSHVS 120
           +  ML+GLNGL+SLD VLHL+AGP+LRNRS++++FTHLLHSRY SKE+LS+YSAHP+H++
Sbjct: 85  VNDMLNGLNGLISLDQVLHLTAGPILRNRSSSSSFTHLLHSRYPSKEDLSIYSAHPAHMN 144

Query: 121 VVKECVLPICDDIMAVDWVADDLQGPVVAPPGSVVRVTFLKLKEDLGEEVKREVLEVVAG 180
           VVK+ VLPICDDIMAVDWVAD LQG +V PPGS +RVTFLKLKE+LG+EVK ++LEV+AG
Sbjct: 145 VVKQFVLPICDDIMAVDWVADALQGSLVPPPGSALRVTFLKLKENLGDEVKGQILEVIAG 204

Query: 181 LRDKLGPNVQLTVGENFSPARAKGFSIASIAVFPGVKELEAVDSDQEMAELQKEKVRERL 240
           LR+KLGPNVQLTVGENFSPARAKGFSIASIA+ PG  ELEA  SD+EM ELQKEKVRE L
Sbjct: 205 LREKLGPNVQLTVGENFSPARAKGFSIASIAILPGPNELEAAASDKEMVELQKEKVREHL 264

Query: 241 ESVIVVDYVVPPPHTASL 259
           ESVIVVDYVVPPP TASL
Sbjct: 265 ESVIVVDYVVPPPQTASL 282

BLAST of Sed0020871 vs. NCBI nr
Match: XP_023521400.1 (stress-response A/B barrel domain-containing protein UP3-like [Cucurbita pepo subsp. pepo] >XP_023546924.1 stress-response A/B barrel domain-containing protein UP3-like [Cucurbita pepo subsp. pepo] >KAG6599531.1 Stress-response A/B barrel domain-containing protein UP3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030509.1 Stress-response A/B barrel domain-containing protein UP3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 370.9 bits (951), Expect = 8.7e-99
Identity = 193/258 (74.81%), Postives = 218/258 (84.50%), Query Frame = 0

Query: 1   MLSVALRSFSALPSKTLRLRHRRNPNFPSFKPFSVKMSSQTQPIEHTVLFKLKDGVDSSK 60
           MLS+ALR+ S LPS +  LR R N + PSF+PFSV MS+ T PIEH VLFK+KDGVDSSK
Sbjct: 1   MLSLALRTISTLPSSSRHLRLRPN-HRPSFRPFSVNMSTHTPPIEHVVLFKVKDGVDSSK 60

Query: 61  IAAMLSGLNGLVSLDPVLHLSAGPLLRNRSAAANFTHLLHSRYASKEELSLYSAHPSHVS 120
           +  ML+GLN L SL+ VLHL+A P+LRN S+A+NFTHLLHSRY SKE+LS YSAH +HV 
Sbjct: 61  VNDMLTGLNSLTSLEQVLHLTAAPVLRNCSSASNFTHLLHSRYPSKEDLSSYSAHSAHVD 120

Query: 121 VVKECVLPICDDIMAVDWVADDLQGPVVAPPGSVVRVTFLKLKEDLGEEVKREVLEVVAG 180
           VVK+ VLPICDDIMAVDWVAD LQGPV APPGS +R+TFLKLKE+L EEVK E+LEV+AG
Sbjct: 121 VVKQFVLPICDDIMAVDWVADALQGPVAAPPGSALRITFLKLKENLAEEVKNEILEVIAG 180

Query: 181 LRDKLGPNVQLTVGENFSPARAKGFSIASIAVFPGVKELEAVDSDQEMAELQKEKVRERL 240
           LR+KLGPNVQLTVGENFSP RAKG+SIASIA+FPG KELEA  SD EM EL KEKVRE L
Sbjct: 181 LREKLGPNVQLTVGENFSPGRAKGYSIASIAIFPGPKELEAASSDPEMVELHKEKVREHL 240

Query: 241 ESVIVVDYVVPPPHTASL 259
           ESVIVVDYVVPP  TASL
Sbjct: 241 ESVIVVDYVVPPAQTASL 257

BLAST of Sed0020871 vs. NCBI nr
Match: XP_022946739.1 (stress-response A/B barrel domain-containing protein UP3-like [Cucurbita moschata])

HSP 1 Score: 370.5 bits (950), Expect = 1.1e-98
Identity = 193/258 (74.81%), Postives = 218/258 (84.50%), Query Frame = 0

Query: 1   MLSVALRSFSALPSKTLRLRHRRNPNFPSFKPFSVKMSSQTQPIEHTVLFKLKDGVDSSK 60
           MLS+ALR+ S LPS +  LR R N + PSF+PFSV MS+ T PIEH VLFK+KDGVDSSK
Sbjct: 1   MLSLALRTISMLPSSSRHLRLRPN-HRPSFRPFSVNMSTHTTPIEHVVLFKVKDGVDSSK 60

Query: 61  IAAMLSGLNGLVSLDPVLHLSAGPLLRNRSAAANFTHLLHSRYASKEELSLYSAHPSHVS 120
           +  ML+GLN L SL+ VLHL+A P+LRN S+A+NFTHLLHSRY SKE+LS YSAH +HV 
Sbjct: 61  VNDMLTGLNSLTSLEQVLHLTAAPVLRNCSSASNFTHLLHSRYPSKEDLSSYSAHSAHVD 120

Query: 121 VVKECVLPICDDIMAVDWVADDLQGPVVAPPGSVVRVTFLKLKEDLGEEVKREVLEVVAG 180
           VVK+ VLPICDDIMAVDWVAD LQGPV APPGS +R+TFLKLKE+L EEVK E+LEV+AG
Sbjct: 121 VVKQFVLPICDDIMAVDWVADALQGPVAAPPGSALRITFLKLKENLAEEVKNEILEVIAG 180

Query: 181 LRDKLGPNVQLTVGENFSPARAKGFSIASIAVFPGVKELEAVDSDQEMAELQKEKVRERL 240
           LR+KLGPNVQLTVGENFSP RAKG+SIASIA+FPG KELEA  SD EM EL KEKVRE L
Sbjct: 181 LREKLGPNVQLTVGENFSPGRAKGYSIASIAIFPGPKELEAASSDPEMVELHKEKVREHL 240

Query: 241 ESVIVVDYVVPPPHTASL 259
           ESVIVVDYVVPP  TASL
Sbjct: 241 ESVIVVDYVVPPAQTASL 257

BLAST of Sed0020871 vs. NCBI nr
Match: XP_022999224.1 (stress-response A/B barrel domain-containing protein UP3-like [Cucurbita maxima])

HSP 1 Score: 368.2 bits (944), Expect = 5.7e-98
Identity = 191/258 (74.03%), Postives = 218/258 (84.50%), Query Frame = 0

Query: 1   MLSVALRSFSALPSKTLRLRHRRNPNFPSFKPFSVKMSSQTQPIEHTVLFKLKDGVDSSK 60
           MLS+ALR+ S LPS +  LR R + + PSF+PFSV MS+ T PIEH VLFK+KDGVDSSK
Sbjct: 1   MLSLALRTISTLPSSSRHLRPRPH-HRPSFRPFSVNMSTHTPPIEHVVLFKVKDGVDSSK 60

Query: 61  IAAMLSGLNGLVSLDPVLHLSAGPLLRNRSAAANFTHLLHSRYASKEELSLYSAHPSHVS 120
           +  ML+GLN L SL+ VLHL+A P+LRN S+A+NFTHLLHSRY SKE+LS YSAH +HV 
Sbjct: 61  VNDMLTGLNSLTSLEQVLHLTAAPVLRNCSSASNFTHLLHSRYPSKEDLSSYSAHSAHVD 120

Query: 121 VVKECVLPICDDIMAVDWVADDLQGPVVAPPGSVVRVTFLKLKEDLGEEVKREVLEVVAG 180
           VVK+ VLPICDDIMAVDWVAD LQGPV APPGS +R+TFLKLKE+L +EVK E+LEV+AG
Sbjct: 121 VVKQFVLPICDDIMAVDWVADALQGPVAAPPGSALRITFLKLKENLAQEVKNEILEVIAG 180

Query: 181 LRDKLGPNVQLTVGENFSPARAKGFSIASIAVFPGVKELEAVDSDQEMAELQKEKVRERL 240
           LR+KLGPNVQLTVGENFSP RAKG+SIASIA+FPG KELEA  SD EM EL KEKVRE L
Sbjct: 181 LREKLGPNVQLTVGENFSPGRAKGYSIASIAIFPGPKELEAASSDPEMVELHKEKVREHL 240

Query: 241 ESVIVVDYVVPPPHTASL 259
           ESVIVVDYVVPP  TASL
Sbjct: 241 ESVIVVDYVVPPAQTASL 257

BLAST of Sed0020871 vs. ExPASy Swiss-Prot
Match: Q9SIP1 (Stress-response A/B barrel domain-containing protein UP3 OS=Arabidopsis thaliana OX=3702 GN=UP3 PE=1 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 6.6e-65
Identity = 139/252 (55.16%), Postives = 176/252 (69.84%), Query Frame = 0

Query: 8   SFSALPSKTLRLRHRRNPNFPSFKPFSVKMSS--QTQPIEHTVLFKLKDGVDSSKIAAML 67
           +F+   +K  R+  R  P     + FSV  SS  Q+Q IEH VLFK KD  DS+KI +M+
Sbjct: 15  AFTISTTKHSRINLRLLPR----RSFSVMSSSTPQSQIIEHIVLFKTKDDADSTKITSMI 74

Query: 68  SGLNGLVSLDPVLHLSAGPLLRNRSAAANFTHLLHSRYASKEELSLYSAHPSHVSVVKEC 127
           + LN L  LD VLH+S  PL R  SA A FTH+LHSRY SKE+L+ Y+AHP HV VVKE 
Sbjct: 75  NNLNALAYLDQVLHISTSPLHRISSATA-FTHVLHSRYESKEDLASYAAHPDHVRVVKES 134

Query: 128 VLPICDDIMAVDWVADDLQGPVVAPPGSVVRVTFLKLKEDLGEEVKREVLEVVAGLRDKL 187
           VLPICDDIMAVDW+AD + G V   PGSV ++T LKLKED+ +E K E+  V+ GL +K 
Sbjct: 135 VLPICDDIMAVDWIADRIPGTVAPLPGSVAKLTLLKLKEDVADEAKSEITGVIKGLSEKF 194

Query: 188 GPNVQLTVGENFSPARAKGFSIASIAVFPGVKELEAVDSDQEMAELQKEKVRERLESVIV 247
               Q+TVGENFSPARAKGFSIASIA F  + E+EAVD+ +E+   QK+KVR+ ++S IV
Sbjct: 195 PGIDQITVGENFSPARAKGFSIASIAYFKDLSEMEAVDAQKELVNSQKDKVRDYVDSTIV 254

Query: 248 VDYVVPPPHTAS 258
           V++VVP    +S
Sbjct: 255 VEFVVPSSSQSS 261

BLAST of Sed0020871 vs. ExPASy Swiss-Prot
Match: Q9SYD8 (Stress-response A/B barrel domain-containing protein DABB1 OS=Arabidopsis thaliana OX=3702 GN=DABB1 PE=1 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 7.5e-45
Identity = 104/210 (49.52%), Postives = 146/210 (69.52%), Query Frame = 0

Query: 44  IEHTVLFKLK-DGVDSSKIAAMLSGLNGLVSLDPVLHLSAGPLLR-NRSAAANFTHLLHS 103
           +EH VLFKL  D VDS KI +M++G+N LV+LD VLHL  G + R   + A++FTH+LHS
Sbjct: 5   VEHVVLFKLNDDDVDSGKINSMVNGINELVNLDQVLHLYCGSIHRLITTTASDFTHVLHS 64

Query: 104 RYASKEELSLYSAHPSHVSVVKECVLPICDDIMAVDWVADDLQGPVVAPPGSVVRVTFLK 163
           RY SKE+L+ Y+ HP HV VVKE    I +DIMAVDW+A+     +  P GS+ ++T LK
Sbjct: 65  RYRSKEDLNAYAIHPDHVRVVKESE-SIREDIMAVDWIAEQAPEALAPPLGSIGKITLLK 124

Query: 164 LKEDLGEEVKREVLEVVAGLRDKLGPNVQLTVGENFSPARAKGFSIASIAVFPGVKELEA 223
           LKE++ EE K E++EV   +++K     Q+TVGENFSP R+K FSI SI+ F  + E+EA
Sbjct: 125 LKENVMEEAKLEIMEV---MKEKFEGIDQITVGENFSPGRSKDFSIGSISYFRDLGEIEA 184

Query: 224 VDSDQEMAELQKEKVRERLESVIVVDYVVP 252
           VD   +  +LQ +K+R+ ++  IVV++ VP
Sbjct: 185 VD---DQMKLQNDKIRDYVDDTIVVEFNVP 207

BLAST of Sed0020871 vs. ExPASy TrEMBL
Match: A0A0A0LET1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G000190 PE=4 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 1.0e-100
Identity = 192/258 (74.42%), Postives = 225/258 (87.21%), Query Frame = 0

Query: 1   MLSVALRSFSALPSKTLRLRHRRNPNFPSFKPFSVKMSSQTQPIEHTVLFKLKDGVDSSK 60
           MLS ALR+ + LPS +  LR  R    PS +PFSVKMS+ TQPIEH VLFK+K+G+DSSK
Sbjct: 25  MLSSALRTLTTLPSTSRNLRLLRLNPCPSSRPFSVKMSAHTQPIEHIVLFKVKEGIDSSK 84

Query: 61  IAAMLSGLNGLVSLDPVLHLSAGPLLRNRSAAANFTHLLHSRYASKEELSLYSAHPSHVS 120
           +  ML+GLNGL+SLD VLHL+AGP+LRNRS++++FTHLLHSRY SKE+LS+YSAHP+H++
Sbjct: 85  VNDMLNGLNGLISLDQVLHLTAGPILRNRSSSSSFTHLLHSRYPSKEDLSIYSAHPAHMN 144

Query: 121 VVKECVLPICDDIMAVDWVADDLQGPVVAPPGSVVRVTFLKLKEDLGEEVKREVLEVVAG 180
           VVK+ VLPICDDIMAVDWVAD LQG +V PPGS +RVTFLKLKE+LG+EVK ++LEV+AG
Sbjct: 145 VVKQFVLPICDDIMAVDWVADALQGSLVPPPGSALRVTFLKLKENLGDEVKGQILEVIAG 204

Query: 181 LRDKLGPNVQLTVGENFSPARAKGFSIASIAVFPGVKELEAVDSDQEMAELQKEKVRERL 240
           LR+KLGPNVQLTVGENFSPARAKGFSIASIA+ PG  ELEA  SD+EM ELQKEKVRE L
Sbjct: 205 LREKLGPNVQLTVGENFSPARAKGFSIASIAILPGPNELEAAASDKEMVELQKEKVREHL 264

Query: 241 ESVIVVDYVVPPPHTASL 259
           ESVIVVDYVVPPP TASL
Sbjct: 265 ESVIVVDYVVPPPQTASL 282

BLAST of Sed0020871 vs. ExPASy TrEMBL
Match: A0A6J1G4Q8 (stress-response A/B barrel domain-containing protein UP3-like OS=Cucurbita moschata OX=3662 GN=LOC111450717 PE=4 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 5.5e-99
Identity = 193/258 (74.81%), Postives = 218/258 (84.50%), Query Frame = 0

Query: 1   MLSVALRSFSALPSKTLRLRHRRNPNFPSFKPFSVKMSSQTQPIEHTVLFKLKDGVDSSK 60
           MLS+ALR+ S LPS +  LR R N + PSF+PFSV MS+ T PIEH VLFK+KDGVDSSK
Sbjct: 1   MLSLALRTISMLPSSSRHLRLRPN-HRPSFRPFSVNMSTHTTPIEHVVLFKVKDGVDSSK 60

Query: 61  IAAMLSGLNGLVSLDPVLHLSAGPLLRNRSAAANFTHLLHSRYASKEELSLYSAHPSHVS 120
           +  ML+GLN L SL+ VLHL+A P+LRN S+A+NFTHLLHSRY SKE+LS YSAH +HV 
Sbjct: 61  VNDMLTGLNSLTSLEQVLHLTAAPVLRNCSSASNFTHLLHSRYPSKEDLSSYSAHSAHVD 120

Query: 121 VVKECVLPICDDIMAVDWVADDLQGPVVAPPGSVVRVTFLKLKEDLGEEVKREVLEVVAG 180
           VVK+ VLPICDDIMAVDWVAD LQGPV APPGS +R+TFLKLKE+L EEVK E+LEV+AG
Sbjct: 121 VVKQFVLPICDDIMAVDWVADALQGPVAAPPGSALRITFLKLKENLAEEVKNEILEVIAG 180

Query: 181 LRDKLGPNVQLTVGENFSPARAKGFSIASIAVFPGVKELEAVDSDQEMAELQKEKVRERL 240
           LR+KLGPNVQLTVGENFSP RAKG+SIASIA+FPG KELEA  SD EM EL KEKVRE L
Sbjct: 181 LREKLGPNVQLTVGENFSPGRAKGYSIASIAIFPGPKELEAASSDPEMVELHKEKVREHL 240

Query: 241 ESVIVVDYVVPPPHTASL 259
           ESVIVVDYVVPP  TASL
Sbjct: 241 ESVIVVDYVVPPAQTASL 257

BLAST of Sed0020871 vs. ExPASy TrEMBL
Match: A0A6J1KGF6 (stress-response A/B barrel domain-containing protein UP3-like OS=Cucurbita maxima OX=3661 GN=LOC111493663 PE=4 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 2.7e-98
Identity = 191/258 (74.03%), Postives = 218/258 (84.50%), Query Frame = 0

Query: 1   MLSVALRSFSALPSKTLRLRHRRNPNFPSFKPFSVKMSSQTQPIEHTVLFKLKDGVDSSK 60
           MLS+ALR+ S LPS +  LR R + + PSF+PFSV MS+ T PIEH VLFK+KDGVDSSK
Sbjct: 1   MLSLALRTISTLPSSSRHLRPRPH-HRPSFRPFSVNMSTHTPPIEHVVLFKVKDGVDSSK 60

Query: 61  IAAMLSGLNGLVSLDPVLHLSAGPLLRNRSAAANFTHLLHSRYASKEELSLYSAHPSHVS 120
           +  ML+GLN L SL+ VLHL+A P+LRN S+A+NFTHLLHSRY SKE+LS YSAH +HV 
Sbjct: 61  VNDMLTGLNSLTSLEQVLHLTAAPVLRNCSSASNFTHLLHSRYPSKEDLSSYSAHSAHVD 120

Query: 121 VVKECVLPICDDIMAVDWVADDLQGPVVAPPGSVVRVTFLKLKEDLGEEVKREVLEVVAG 180
           VVK+ VLPICDDIMAVDWVAD LQGPV APPGS +R+TFLKLKE+L +EVK E+LEV+AG
Sbjct: 121 VVKQFVLPICDDIMAVDWVADALQGPVAAPPGSALRITFLKLKENLAQEVKNEILEVIAG 180

Query: 181 LRDKLGPNVQLTVGENFSPARAKGFSIASIAVFPGVKELEAVDSDQEMAELQKEKVRERL 240
           LR+KLGPNVQLTVGENFSP RAKG+SIASIA+FPG KELEA  SD EM EL KEKVRE L
Sbjct: 181 LREKLGPNVQLTVGENFSPGRAKGYSIASIAIFPGPKELEAASSDPEMVELHKEKVREHL 240

Query: 241 ESVIVVDYVVPPPHTASL 259
           ESVIVVDYVVPP  TASL
Sbjct: 241 ESVIVVDYVVPPAQTASL 257

BLAST of Sed0020871 vs. ExPASy TrEMBL
Match: A0A5D3CI21 (Stress-response A/B barrel domain-containing protein UP3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G001200 PE=4 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 2.3e-97
Identity = 190/258 (73.64%), Postives = 221/258 (85.66%), Query Frame = 0

Query: 1   MLSVALRSFSALPSKTLRLRHRRNPNFPSFKPFSVKMSSQTQPIEHTVLFKLKDGVDSSK 60
           MLS ALR++S LP  +  LR  R     S +PFSV MS+ TQPIEH VLFK+KDG+DSSK
Sbjct: 1   MLSSALRTWSTLPFSSRNLRRLRLNPCHSSRPFSVNMSAHTQPIEHIVLFKVKDGLDSSK 60

Query: 61  IAAMLSGLNGLVSLDPVLHLSAGPLLRNRSAAANFTHLLHSRYASKEELSLYSAHPSHVS 120
           +  ML+GLNGL SLD VLHL+AGP+LRNRS ++ FTHLLHSRY SKE+LS+YSAHP+H++
Sbjct: 61  VNDMLNGLNGLNSLDQVLHLTAGPILRNRS-SSTFTHLLHSRYPSKEDLSIYSAHPAHMN 120

Query: 121 VVKECVLPICDDIMAVDWVADDLQGPVVAPPGSVVRVTFLKLKEDLGEEVKREVLEVVAG 180
           VVK+ VLPICDDIMAVDWVAD LQGP+V  PGS +RVTFLKLKE+LG+EVK ++LEV+AG
Sbjct: 121 VVKQFVLPICDDIMAVDWVADALQGPLVPSPGSALRVTFLKLKENLGDEVKGQILEVIAG 180

Query: 181 LRDKLGPNVQLTVGENFSPARAKGFSIASIAVFPGVKELEAVDSDQEMAELQKEKVRERL 240
           +R+KLGPNVQLTVG+NFSPARAKGFSIASIA+FPG  ELEA  SD+EM ELQKEKVRE L
Sbjct: 181 MREKLGPNVQLTVGDNFSPARAKGFSIASIAIFPGPNELEAAASDKEMVELQKEKVREHL 240

Query: 241 ESVIVVDYVVPPPHTASL 259
           ESVIVVDYVVPPP TASL
Sbjct: 241 ESVIVVDYVVPPPKTASL 257

BLAST of Sed0020871 vs. ExPASy TrEMBL
Match: A0A1S3CBB4 (stress-response A/B barrel domain-containing protein UP3 OS=Cucumis melo OX=3656 GN=LOC103498768 PE=4 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 2.3e-97
Identity = 190/258 (73.64%), Postives = 221/258 (85.66%), Query Frame = 0

Query: 1   MLSVALRSFSALPSKTLRLRHRRNPNFPSFKPFSVKMSSQTQPIEHTVLFKLKDGVDSSK 60
           MLS ALR++S LP  +  LR  R     S +PFSV MS+ TQPIEH VLFK+KDG+DSSK
Sbjct: 1   MLSSALRTWSTLPFSSRNLRRLRLNPCHSSRPFSVNMSAHTQPIEHIVLFKVKDGLDSSK 60

Query: 61  IAAMLSGLNGLVSLDPVLHLSAGPLLRNRSAAANFTHLLHSRYASKEELSLYSAHPSHVS 120
           +  ML+GLNGL SLD VLHL+AGP+LRNRS ++ FTHLLHSRY SKE+LS+YSAHP+H++
Sbjct: 61  VNDMLNGLNGLNSLDQVLHLTAGPILRNRS-SSTFTHLLHSRYPSKEDLSIYSAHPAHMN 120

Query: 121 VVKECVLPICDDIMAVDWVADDLQGPVVAPPGSVVRVTFLKLKEDLGEEVKREVLEVVAG 180
           VVK+ VLPICDDIMAVDWVAD LQGP+V  PGS +RVTFLKLKE+LG+EVK ++LEV+AG
Sbjct: 121 VVKQFVLPICDDIMAVDWVADALQGPLVPSPGSALRVTFLKLKENLGDEVKGQILEVIAG 180

Query: 181 LRDKLGPNVQLTVGENFSPARAKGFSIASIAVFPGVKELEAVDSDQEMAELQKEKVRERL 240
           +R+KLGPNVQLTVG+NFSPARAKGFSIASIA+FPG  ELEA  SD+EM ELQKEKVRE L
Sbjct: 181 MREKLGPNVQLTVGDNFSPARAKGFSIASIAIFPGPNELEAAASDKEMVELQKEKVREHL 240

Query: 241 ESVIVVDYVVPPPHTASL 259
           ESVIVVDYVVPPP TASL
Sbjct: 241 ESVIVVDYVVPPPKTASL 257

BLAST of Sed0020871 vs. TAIR 10
Match: AT2G31670.1 (Stress responsive alpha-beta barrel domain protein )

HSP 1 Score: 248.8 bits (634), Expect = 4.7e-66
Identity = 139/252 (55.16%), Postives = 176/252 (69.84%), Query Frame = 0

Query: 8   SFSALPSKTLRLRHRRNPNFPSFKPFSVKMSS--QTQPIEHTVLFKLKDGVDSSKIAAML 67
           +F+   +K  R+  R  P     + FSV  SS  Q+Q IEH VLFK KD  DS+KI +M+
Sbjct: 15  AFTISTTKHSRINLRLLPR----RSFSVMSSSTPQSQIIEHIVLFKTKDDADSTKITSMI 74

Query: 68  SGLNGLVSLDPVLHLSAGPLLRNRSAAANFTHLLHSRYASKEELSLYSAHPSHVSVVKEC 127
           + LN L  LD VLH+S  PL R  SA A FTH+LHSRY SKE+L+ Y+AHP HV VVKE 
Sbjct: 75  NNLNALAYLDQVLHISTSPLHRISSATA-FTHVLHSRYESKEDLASYAAHPDHVRVVKES 134

Query: 128 VLPICDDIMAVDWVADDLQGPVVAPPGSVVRVTFLKLKEDLGEEVKREVLEVVAGLRDKL 187
           VLPICDDIMAVDW+AD + G V   PGSV ++T LKLKED+ +E K E+  V+ GL +K 
Sbjct: 135 VLPICDDIMAVDWIADRIPGTVAPLPGSVAKLTLLKLKEDVADEAKSEITGVIKGLSEKF 194

Query: 188 GPNVQLTVGENFSPARAKGFSIASIAVFPGVKELEAVDSDQEMAELQKEKVRERLESVIV 247
               Q+TVGENFSPARAKGFSIASIA F  + E+EAVD+ +E+   QK+KVR+ ++S IV
Sbjct: 195 PGIDQITVGENFSPARAKGFSIASIAYFKDLSEMEAVDAQKELVNSQKDKVRDYVDSTIV 254

Query: 248 VDYVVPPPHTAS 258
           V++VVP    +S
Sbjct: 255 VEFVVPSSSQSS 261

BLAST of Sed0020871 vs. TAIR 10
Match: AT1G51360.1 (dimeric A/B barrel domainS-protein 1 )

HSP 1 Score: 182.2 bits (461), Expect = 5.4e-46
Identity = 104/210 (49.52%), Postives = 146/210 (69.52%), Query Frame = 0

Query: 44  IEHTVLFKLK-DGVDSSKIAAMLSGLNGLVSLDPVLHLSAGPLLR-NRSAAANFTHLLHS 103
           +EH VLFKL  D VDS KI +M++G+N LV+LD VLHL  G + R   + A++FTH+LHS
Sbjct: 5   VEHVVLFKLNDDDVDSGKINSMVNGINELVNLDQVLHLYCGSIHRLITTTASDFTHVLHS 64

Query: 104 RYASKEELSLYSAHPSHVSVVKECVLPICDDIMAVDWVADDLQGPVVAPPGSVVRVTFLK 163
           RY SKE+L+ Y+ HP HV VVKE    I +DIMAVDW+A+     +  P GS+ ++T LK
Sbjct: 65  RYRSKEDLNAYAIHPDHVRVVKESE-SIREDIMAVDWIAEQAPEALAPPLGSIGKITLLK 124

Query: 164 LKEDLGEEVKREVLEVVAGLRDKLGPNVQLTVGENFSPARAKGFSIASIAVFPGVKELEA 223
           LKE++ EE K E++EV   +++K     Q+TVGENFSP R+K FSI SI+ F  + E+EA
Sbjct: 125 LKENVMEEAKLEIMEV---MKEKFEGIDQITVGENFSPGRSKDFSIGSISYFRDLGEIEA 184

Query: 224 VDSDQEMAELQKEKVRERLESVIVVDYVVP 252
           VD   +  +LQ +K+R+ ++  IVV++ VP
Sbjct: 185 VD---DQMKLQNDKIRDYVDDTIVVEFNVP 207

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038889133.16.5e-10276.36stress-response A/B barrel domain-containing protein UP3 [Benincasa hispida][more]
XP_011648585.12.1e-10074.42stress-response A/B barrel domain-containing protein UP3 [Cucumis sativus] >KGN6... [more]
XP_023521400.18.7e-9974.81stress-response A/B barrel domain-containing protein UP3-like [Cucurbita pepo su... [more]
XP_022946739.11.1e-9874.81stress-response A/B barrel domain-containing protein UP3-like [Cucurbita moschat... [more]
XP_022999224.15.7e-9874.03stress-response A/B barrel domain-containing protein UP3-like [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
Q9SIP16.6e-6555.16Stress-response A/B barrel domain-containing protein UP3 OS=Arabidopsis thaliana... [more]
Q9SYD87.5e-4549.52Stress-response A/B barrel domain-containing protein DABB1 OS=Arabidopsis thalia... [more]
Match NameE-valueIdentityDescription
A0A0A0LET11.0e-10074.42Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G000190 PE=4 SV=1[more]
A0A6J1G4Q85.5e-9974.81stress-response A/B barrel domain-containing protein UP3-like OS=Cucurbita mosch... [more]
A0A6J1KGF62.7e-9874.03stress-response A/B barrel domain-containing protein UP3-like OS=Cucurbita maxim... [more]
A0A5D3CI212.3e-9773.64Stress-response A/B barrel domain-containing protein UP3 OS=Cucumis melo var. ma... [more]
A0A1S3CBB42.3e-9773.64stress-response A/B barrel domain-containing protein UP3 OS=Cucumis melo OX=3656... [more]
Match NameE-valueIdentityDescription
AT2G31670.14.7e-6655.16Stress responsive alpha-beta barrel domain protein [more]
AT1G51360.15.4e-4649.52dimeric A/B barrel domainS-protein 1 [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 221..241
NoneNo IPR availableGENE3D3.30.70.100coord: 35..142
e-value: 3.3E-22
score: 80.9
coord: 149..250
e-value: 6.0E-13
score: 51.0
NoneNo IPR availablePANTHERPTHR33178:SF3STRESS-RESPONSE A/B BARREL DOMAIN-CONTAINING PROTEIN UP3coord: 32..257
IPR013097Stress responsive alpha-beta barrelSMARTSM00886Dabb_2coord: 44..140
e-value: 4.8E-20
score: 82.6
coord: 154..250
e-value: 5.6E-8
score: 42.5
IPR013097Stress responsive alpha-beta barrelPFAMPF07876Dabbcoord: 155..250
e-value: 5.8E-13
score: 49.3
coord: 44..139
e-value: 4.6E-20
score: 72.0
IPR013097Stress responsive alpha-beta barrelPROSITEPS51502S_R_A_B_BARRELcoord: 154..248
score: 20.319962
IPR013097Stress responsive alpha-beta barrelPROSITEPS51502S_R_A_B_BARRELcoord: 44..138
score: 23.874588
IPR044662Stress-response A/B barrel domain-containing protein HS1/DABB1-likePANTHERPTHR33178FAMILY NOT NAMEDcoord: 32..257
IPR011008Dimeric alpha-beta barrelSUPERFAMILY54909Dimeric alpha+beta barrelcoord: 151..252
IPR011008Dimeric alpha-beta barrelSUPERFAMILY54909Dimeric alpha+beta barrelcoord: 42..145

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0020871.1Sed0020871.1mRNA