Sed0020820 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTATATTCCTCAAAGATCCCAAAAAAAAAAAAAGTTTATTTTTATTTAGGAAATTAAACACACAAACCCAACAACAAGGATTCAAAGTTTTTTCATCTCCTTCACTTCAGCAAAATCCGTTCATTCTTTGCTCTGATTTTTCTCCAATTTCTGTGATTGTTCTTCAGATCTTGAAATGGATGAGGTTTCAGATGAGGTAAATCGGGTCAAGAACGAGTGGAACGACGCTTTCCGGCAGACAATCGACCGGATTCAGGCGATCGAATCGTACGAGAATCAAAGCGGATCGGCGGAGAAGAATTCGCTTCCGAGATTGAATGCTCTTGCTCAAGATGGATTGAACTTGATGTCTTCGTTGGAATTTAAGCTCGATCTTCTTGCGCCTCAGTTGGTGTCTGAATCTGAAGTTGAGGCTGCTCAATCGCTGCTTCAATCTTGGAAAAATCAATCCCTCAAGTAACCGATTTCAACTCTTTACTTTTTTTGTTGCTTCTGTAATTATCAAAATGATCTGCGATTGTCGTTTTGGTTGTCATGGGCTTTGTTTTTTCAACTTTGTGTGTGTGTGTGTGTTTTTGTTTCAGTTTACGATCGAGTCTGAGAAATGCTAATATTCAAGCAAAAGCCAACATGAGAAAAGCTGCTCGGGAGGAGGTGATTAATTCAAACTGGTTTTGTAAAATTATCATAAACAGTTTTTTTTTTCCTTTTTTGAAACTGGGAAATCGGAAATCGGATTTTGGCTCCACTATAAATGGGGTAACCACACGCCCACCCATAGGCCAGCCACTAGGATCCGATTTCACTCTACTATAATCGGGGTAACCATGCCCATCCATAGGCTAGCCGTCGGGATCTGATTTCCCTCTACTATAATCGGGTAACCACGCCCCCATCCATAGGCCAGCCACCGGGATCTGATTTCGCTCTGCTGTAATCAGGGTAACCACGCCCATCTATAGACCAGCCACCGGGATCCGATTTCGTTCTTCTATAATCGGGGGTAACCATGCCCATCCATAGGCCAGCCACTGGGATCTGATTTTGTTATATTATAATCGGGGTAACTACGCCCATCCCTAAGCCATCAGAAGACATGGAAGGAATGGGAACACGAGATGGGTCAAATTAACTTCACAAATGAGTGTTGAACCTGAGACCAAATCTAAGCTTTCGACCATCGCGGCACCCCTTGGGGACCATGATCAATTATTGATTAGCTCTAGTTTGTTTTTTGAAACAAATTAGCTCTAGTTTCCTTATTGTTTAAATGTGGTATTTCTCCATGATTTCCTAAATGTTTCATATTATTTCTTCAAAGTGAAAATTTACATTGCACCCTAAAAAAATCTGGTGAATTTGTAGAGAGAACGACTTCTAGGTGGAGGAGAAGAGTCCACGATTCGCAGACGGAATTTACAGTATGTTTTCAATGCTTAACGTTTTCAGAAGGTTTATCTAATTGTCTCTTGAAATAAATTTTGTAAACTCTAATTTTAAGCTTCATCTCTTTCGTAATGTACTGATTTGTTTTTCTCCTTTGGCAGAACTAAGGCTGGAATGACATCTGCTGCAGAAAGCATCACCGACAGCCTTCGCCGAACCCGTCAGCTTATGGTTCAGGTCTGTTGTTGTTGTTATATTTCTGTCTTTCTATCGTATTTACTTTAATCTTGATTGGATTTTAATTTCATTTCTTTTAGTAATGTAATGTTCTTGAATATCTGATCTGTAGGAGGTAGAAAGAACTGCAAGCACAATTGAGACTTTCGGTATGTTTATGCAAATCTGAGTATGACATCACGTCTCTCTTTCCTGTTCTTTTTTCGAGTCGATTAGTCGTTTTTACATTTGTTTAGTGTATTAAAATGTATCTTGATGTTTGAAATTACTAAGCAAATGAACTTGTAGGAATATGTTGTGTACCATGTGTTGTAGCGGCCTTAAGCATAGCAATTAAAAGAATTTCCTCAGTTGTAGATTTTATCTATTCCCTAAGTTGGCAAACTGGAAACTAAGACATAATTTTGTGTTTTATTATTTGTGTCGGTTGATATAATTAAATTTACCTCAATCCATCAGCTTAGGCTTTTGGATTGATCGGTGGTTTAACATAATTCAACATGGTATCAGAGTCCACAAGTGAGGGGGAGGGTTGGTCTGGATTGATGGGTGGTTTAACATAATTCAACATGGTATCAGAGCAGGAGGTCATGAGTTCGAATTCCTATCATGTCATTTCCTCCCCAATTAAAATTAAATTCCAGCCTTTCTCAAATTTCAAAGCCCACAAGTGAGGGGGAGTGTTGGTTGATATATTAAATTTACCCCAATCCATTAGCTTATGGTGGTTTAACATATTTCAACAATTTGTCTAAGTCTTTGTTTGGCATTTAATATGAGTATCATCTCATCCATTGATCTAGAAGACTGACCATCGTGATCCTAGCAACATGATAAGGAAATGAATAAATTCTTTGTTTCCTTGTTGTTTATAGAATTTTTCTAGAGGAAGTAAAAATTATTCCTTGGTCTGAATGAGGTAGTTTGATTCTATTGTCATTTTCATTCATTTGTTATATGGACTGGACCATCTAAAATCCACATTAAACCCGCTTGCTTTGCAGTTTGCATAGGCTAGGATTAGTAATGTAAGCACAAGTAGCCATGTAAATTTTCTCTCCTCTCTCCTCCCCTCTTTGTCGGCCCTAACTTGTTCACCTAAGTTTGTACATTCTTTTTTTTTTGACAAATACAGTTCGGACATTGTCGCAGCCTGACGTAAAAAACTTTTTTTTTTCGGGTGATGAAAAGCTACTGCTTTCACTCAAATAAATGAAGGTACAAAGATAAGAGAATACATAAACAAAGGTCAACCCGTCGAGGAAAGGAGCATAAAAGAAACTACAAAATATTGGCTCCGATTGGTCCCCAAGGGGTGGCATAGTGGTTAAAGACTTGGCTTTGAAGGTATGCTCCCTTCAAGGTCTCAGGTTCGAGACTCACCTGTGATATTACTCCTTCAATGTCTCCCGATATCTGGCCTAAGGACGGGCATGGTTACCCTTGTTTCAAAAAAAAGAAGAAACAAAGGTCAACCTGTCGAGAAAAGGAGCATAAAAGAAACTACAAAATATTGGCTCCGATTGGTCCCCAAGGGGTGGCATAGTGGTTGAAGACTTGGGTTTGAAGGTATGCTCCCTTCAAGGTCCCAAGTTCGAGACTCACCTGTGACATTACTCCTTCGATGTCTCCCGGTGCCTAGCCTAGGGACGGGCGTTGTTACCCTTGTTTCAAAAAATAATATTGGCTCCCATTGTTACCAAGAATAAAAAAGAAATGGCTAAAGTTTTATCATAACGACTCGAAGCAAAGAATGAAATATATACCAACCTCAAACCTCTTTCCAAGTATTCTCAAATAGTAAAAGGAATCTTGCTCTTTCAAGCCCATGGAATCTATTAGTACCGCAACGAACCTCTTCCATTATAGCACGACGAGGGTTGTTGGAGGCTAACAACCCCAAAAGTATGGAAAACATATGTAAAAACAGGAAATTTTAAATATACTCTTCAACCATGGGACATTTTTAAGCTATGCTGTCATATTTTCTTATTTTATAAGAGGTTTTTTAAAATCATATTATTGAGCACCAGAAGACGGTTCTGTTTCTCTGTATGATGTCATATACAAGCATGTTTTGTGTTTTGGGAACCATGGTCGACAATTAGAACTTACTTTACGTGTATATTTGTGTTGGTTGATATAATTAAATTTATTCCAATTCATAAGTTTAGGCTTTTGGATTGATCGGTAGTTTAACATAATTCAACAATTTGGTTTTTACAGAGGAATCAACTGGTGTGTTGAAAAAGGCTGAGAGTGAATACAAGGGGCACCGCTCATTGTTAGCGCGAACCAGAAACTTACTTTCCACAATTCAACGGCAAGATGTAATGGACAGGTAAATACATGATTACTTGCCAATTTTTTAAATTAAAACTCTTCATTGGTTTACAAATTAAGTATTTGTACTTTTACAGTTTTATGTCCATAAATTTTAAAAAGTTAAATCATGTTTTGAATTTTGATTTTATATAGTCTCTTATTGTTAATAATAGCGTCGCAAGTTTAATAGTTAATGTTGTTTTCATACAATGTGACAGACAAATAGAAGAGAGTGGTTAGACAAAGTAGAATGACAAATCTAGAAAAAGTGATTTGATACATTGCCTCAATATAGATAACTATTCTCTATTCTAAAAAAAAATAGAGCATTATTATAGGTTTTATATTGGAATGAAAATTAGCATATTATAGGGGTATGATAGACAATAGATGGGAGTTCGTTAGAGAATTTTAGTTGTAAATATAGGGATGGAGTGTAGAATAGTAGAGGCAACTCAGGCAAGCATGAAGCCCCCAAGAGGTGACGTGGTGGTCGAAGGCTTAGGCTTTGAAGGTGTGCTCTTCTCAAGGTCCAGGTTCGAGACTCATCTGTGACATTAATTTGTAGATACCTCTCGTGTCTCCATACCTTTGATGTCTCCCAGTGCCTAGGCAAGGGACGGATATGGTTACCCAAGATATAATGGAGTGAAGCTCCAATTTTTCATTTCAAAAAAAAAAAAAAAAAAACTCAGACAAGCATGAATTGAGTGGTTTTTAGGGTACGAGTCTGAGTGCTCAAGAAAGGGAAGTCCAAGTTCCTCGAAAAGCTTAGTTATCTTGTAGTTTTATTATCTTTTTTCGATTTCAGCATAAACCCTATCACATTAGTGCCAAATGAAGAGGGAAACTTTCTTTTAACGGTCTTTAGATATTAAACTGATGTATCCATTTATACATTTAAAGACAAAATTTTGTTATTTAAACCTCTTTTACACTACAAAGAAATCTAACACTGAGAGGCTATATGGACAGGATTATACTTGCAGTCGGATTTTTCTTTTTCTCTCTTGCTGTTCTTTATGTCGTCTCGAAACGTATTGGGCTACTGAAGTTGCAGAGGATGGCCACTGCTGCCATCAAAGCTGGAATGGTCAAGCAAGCAAATCACAATCCTAGAGATATTGACCAAGGTAGGAATCCAGTTCAAGCCAATGAGGATTTAATTCACAGAGTTGCATATCCACAGGAACAACGTTTTCGGGACGAACTTTGAAGCGGAGTATTCATCGGTGGACAAATTGTGTATCTCCAGAGTTACGCCGTTTTGGTCACGGTTTCCTTTTTGACCATTTCTCGATCTTTGCATGCCATCCTTGCGCAGAGGCCATGATAATCTTCTCTATATCGTTTTAGTCATGGTTTCTTGTGCAGTAAAAATTAGATTTCAGTCTCTGAATTTGTCTAAACAGTGTACCTCTGTGTGGGAAAAACTACCCACAAACACAGGACACATTTTTGGCTGTTACACCACTACCAGTAAATATATTTGTGTAAACATTTTTAAGCTGGTTATTTTCTTCCCCTCTC TTTATATTCCTCAAAGATCCCAAAAAAAAAAAAAGTTTATTTTTATTTAGGAAATTAAACACACAAACCCAACAACAAGGATTCAAAGTTTTTTCATCTCCTTCACTTCAGCAAAATCCGTTCATTCTTTGCTCTGATTTTTCTCCAATTTCTGTGATTGTTCTTCAGATCTTGAAATGGATGAGGTTTCAGATGAGGTAAATCGGGTCAAGAACGAGTGGAACGACGCTTTCCGGCAGACAATCGACCGGATTCAGGCGATCGAATCGTACGAGAATCAAAGCGGATCGGCGGAGAAGAATTCGCTTCCGAGATTGAATGCTCTTGCTCAAGATGGATTGAACTTGATGTCTTCGTTGGAATTTAAGCTCGATCTTCTTGCGCCTCAGTTGGTGTCTGAATCTGAAGTTGAGGCTGCTCAATCGCTGCTTCAATCTTGGAAAAATCAATCCCTCAATTTACGATCGAGTCTGAGAAATGCTAATATTCAAGCAAAAGCCAACATGAGAAAAGCTGCTCGGGAGGAGAGAGAACGACTTCTAGGTGGAGGAGAAGAGTCCACGATTCGCAGACGGAATTTACAAACTAAGGCTGGAATGACATCTGCTGCAGAAAGCATCACCGACAGCCTTCGCCGAACCCGTCAGCTTATGGTTCAGGAGGTAGAAAGAACTGCAAGCACAATTGAGACTTTCGAGGAATCAACTGGTGTGTTGAAAAAGGCTGAGAGTGAATACAAGGGGCACCGCTCATTGTTAGCGCGAACCAGAAACTTACTTTCCACAATTCAACGGCAAGATGTAATGGACAGGATTATACTTGCAGTCGGATTTTTCTTTTTCTCTCTTGCTGTTCTTTATGTCGTCTCGAAACGTATTGGGCTACTGAAGTTGCAGAGGATGGCCACTGCTGCCATCAAAGCTGGAATGGTCAAGCAAGCAAATCACAATCCTAGAGATATTGACCAAGGTAGGAATCCAGTTCAAGCCAATGAGGATTTAATTCACAGAGTTGCATATCCACAGGAACAACGTTTTCGGGACGAACTTTGAAGCGGAGTATTCATCGGTGGACAAATTGTGTATCTCCAGAGTTACGCCGTTTTGGTCACGGTTTCCTTTTTGACCATTTCTCGATCTTTGCATGCCATCCTTGCGCAGAGGCCATGATAATCTTCTCTATATCGTTTTAGTCATGGTTTCTTGTGCAGTAAAAATTAGATTTCAGTCTCTGAATTTGTCTAAACAGTGTACCTCTGTGTGGGAAAAACTACCCACAAACACAGGACACATTTTTGGCTGTTACACCACTACCAGTAAATATATTTGTGTAAACATTTTTAAGCTGGTTATTTTCTTCCCCTCTC ATGGATGAGGTTTCAGATGAGGTAAATCGGGTCAAGAACGAGTGGAACGACGCTTTCCGGCAGACAATCGACCGGATTCAGGCGATCGAATCGTACGAGAATCAAAGCGGATCGGCGGAGAAGAATTCGCTTCCGAGATTGAATGCTCTTGCTCAAGATGGATTGAACTTGATGTCTTCGTTGGAATTTAAGCTCGATCTTCTTGCGCCTCAGTTGGTGTCTGAATCTGAAGTTGAGGCTGCTCAATCGCTGCTTCAATCTTGGAAAAATCAATCCCTCAATTTACGATCGAGTCTGAGAAATGCTAATATTCAAGCAAAAGCCAACATGAGAAAAGCTGCTCGGGAGGAGAGAGAACGACTTCTAGGTGGAGGAGAAGAGTCCACGATTCGCAGACGGAATTTACAAACTAAGGCTGGAATGACATCTGCTGCAGAAAGCATCACCGACAGCCTTCGCCGAACCCGTCAGCTTATGGTTCAGGAGGTAGAAAGAACTGCAAGCACAATTGAGACTTTCGAGGAATCAACTGGTGTGTTGAAAAAGGCTGAGAGTGAATACAAGGGGCACCGCTCATTGTTAGCGCGAACCAGAAACTTACTTTCCACAATTCAACGGCAAGATGTAATGGACAGGATTATACTTGCAGTCGGATTTTTCTTTTTCTCTCTTGCTGTTCTTTATGTCGTCTCGAAACGTATTGGGCTACTGAAGTTGCAGAGGATGGCCACTGCTGCCATCAAAGCTGGAATGGTCAAGCAAGCAAATCACAATCCTAGAGATATTGACCAAGGTAGGAATCCAGTTCAAGCCAATGAGGATTTAATTCACAGAGTTGCATATCCACAGGAACAACGTTTTCGGGACGAACTTTGA MDEVSDEVNRVKNEWNDAFRQTIDRIQAIESYENQSGSAEKNSLPRLNALAQDGLNLMSSLEFKLDLLAPQLVSESEVEAAQSLLQSWKNQSLNLRSSLRNANIQAKANMRKAAREERERLLGGGEESTIRRRNLQTKAGMTSAAESITDSLRRTRQLMVQEVERTASTIETFEESTGVLKKAESEYKGHRSLLARTRNLLSTIQRQDVMDRIILAVGFFFFSLAVLYVVSKRIGLLKLQRMATAAIKAGMVKQANHNPRDIDQGRNPVQANEDLIHRVAYPQEQRFRDEL Homology
BLAST of Sed0020820 vs. NCBI nr
Match: XP_038875148.1 (uncharacterized protein LOC120067685 isoform X2 [Benincasa hispida]) HSP 1 Score: 471.9 bits (1213), Expect = 4.1e-129 Identity = 257/291 (88.32%), Postives = 275/291 (94.50%), Query Frame = 0
BLAST of Sed0020820 vs. NCBI nr
Match: XP_022960516.1 (uncharacterized protein LOC111461229 [Cucurbita moschata] >KAG6592931.1 Vesicle transport protein SEC20, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 469.5 bits (1207), Expect = 2.0e-128 Identity = 259/291 (89.00%), Postives = 277/291 (95.19%), Query Frame = 0
BLAST of Sed0020820 vs. NCBI nr
Match: XP_023005057.1 (uncharacterized protein LOC111498164 [Cucurbita maxima]) HSP 1 Score: 469.5 bits (1207), Expect = 2.0e-128 Identity = 258/291 (88.66%), Postives = 277/291 (95.19%), Query Frame = 0
BLAST of Sed0020820 vs. NCBI nr
Match: KAG7025339.1 (Vesicle transport protein SEC20 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 468.4 bits (1204), Expect = 4.5e-128 Identity = 258/291 (88.66%), Postives = 277/291 (95.19%), Query Frame = 0
BLAST of Sed0020820 vs. NCBI nr
Match: XP_023513480.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111778073 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 465.7 bits (1197), Expect = 2.9e-127 Identity = 259/292 (88.70%), Postives = 277/292 (94.86%), Query Frame = 0
BLAST of Sed0020820 vs. ExPASy Swiss-Prot
Match: Q6QD59 (Vesicle transport protein SEC20 OS=Mus musculus OX=10090 GN=Bnip1 PE=1 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 8.3e-08 Identity = 51/197 (25.89%), Postives = 98/197 (49.75%), Query Frame = 0
BLAST of Sed0020820 vs. ExPASy Swiss-Prot
Match: Q12981 (Vesicle transport protein SEC20 OS=Homo sapiens OX=9606 GN=BNIP1 PE=1 SV=3) HSP 1 Score: 58.2 bits (139), Expect = 1.9e-07 Identity = 48/197 (24.37%), Postives = 97/197 (49.24%), Query Frame = 0
BLAST of Sed0020820 vs. ExPASy Swiss-Prot
Match: Q8VHI8 (Vesicle transport protein SEC20 OS=Rattus norvegicus OX=10116 GN=Bnip1 PE=2 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 1.9e-07 Identity = 50/197 (25.38%), Postives = 98/197 (49.75%), Query Frame = 0
BLAST of Sed0020820 vs. ExPASy TrEMBL
Match: A0A6J1KS49 (uncharacterized protein LOC111498164 OS=Cucurbita maxima OX=3661 GN=LOC111498164 PE=4 SV=1) HSP 1 Score: 469.5 bits (1207), Expect = 9.9e-129 Identity = 258/291 (88.66%), Postives = 277/291 (95.19%), Query Frame = 0
BLAST of Sed0020820 vs. ExPASy TrEMBL
Match: A0A6J1H7T9 (uncharacterized protein LOC111461229 OS=Cucurbita moschata OX=3662 GN=LOC111461229 PE=4 SV=1) HSP 1 Score: 469.5 bits (1207), Expect = 9.9e-129 Identity = 259/291 (89.00%), Postives = 277/291 (95.19%), Query Frame = 0
BLAST of Sed0020820 vs. ExPASy TrEMBL
Match: A0A6J1DTI9 (uncharacterized protein LOC111023863 OS=Momordica charantia OX=3673 GN=LOC111023863 PE=4 SV=1) HSP 1 Score: 459.9 bits (1182), Expect = 7.8e-126 Identity = 248/291 (85.22%), Postives = 276/291 (94.85%), Query Frame = 0
BLAST of Sed0020820 vs. ExPASy TrEMBL
Match: A0A5A7TE96 (Putative vesicle transporter Sec20 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002810 PE=4 SV=1) HSP 1 Score: 451.4 bits (1160), Expect = 2.8e-123 Identity = 251/293 (85.67%), Postives = 272/293 (92.83%), Query Frame = 0
BLAST of Sed0020820 vs. ExPASy TrEMBL
Match: E5GCN4 (Vesicle transport protein SEC20 OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 451.4 bits (1160), Expect = 2.8e-123 Identity = 251/293 (85.67%), Postives = 272/293 (92.83%), Query Frame = 0
BLAST of Sed0020820 vs. TAIR 10
Match: AT3G24315.1 (Sec20 family protein ) HSP 1 Score: 307.8 bits (787), Expect = 9.5e-84 Identity = 182/294 (61.90%), Postives = 223/294 (75.85%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|