Sed0020808 (gene) Chayote v1

Overview


Name	Sed0020808
Type	gene
Organism	Sechium edule (Chayote v1)
Description	CSL zinc finger domain-containing protein
Location	LG05: 44725360 .. 44728513 (+)
RNA-Seq Expression	Sed0020808
Synteny	Sed0020808

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTCCTCCAAACCCTACAGGTTCGCATTCACTTTTCATTTTCCCTATTTTCTTCCTTCCATTTCACCCCAAATTTCCCGTTCTTAGGGTTTTTTTTTTTCCATCTCTAATTCAGCATAATCTTCGTAATCGGAGATCAGAAATTGGAAATCGGAACTTACTCCTCCATTCTAGAGATCTTATTTCTGTTGATTCTCAGTTTTTTTTATGCTTTCCTTTTCGTTGCAGATGGTTAGCGAAATCGCCGCGATGACGACGGCGGTGGCTTTGGTTGCGACGGCGGTTATTTTGGTGGCGGAAGGGGCGGATACGAACGATGTGTACAGTCCGTGTTTGGATGCGAAGATTCAGAGATCGGACGGGTTTACTTTTGCCGTAGCGTTTTCGTCCAAGGAATCGTTCTTTCAGGATCAGATCCAATTTTCGCCTTGTGATCGGCGTTTGGCTTTGGCGTCCAAAACCGCTCAGCTTGCTGTTTTCAGGCCTAAGGTCGATCAGCTCGCTTTCCTCACCATTAACAGCACCACCTTCAATCCGGTACGCGTCTGTGATTTATTCTGTGTTCATCTTAGAACAAAATGCTGGTCTGAATTATTTTCATCCATGAAAATTGATTTCGTTTCTTCCTCTGCTTTTGGTCTTTGTATGTGTTATGAAAACGGAAATCAACCATCGATAAACGAAGATATGAAAACAGATAACGATAAACGTGAAAGACGAAAAGAAAACAACACACATTATGTGGTTCACCAACTTGTGTTGGCTAATCCACGGATAGAGAGGGGTGGAGTTTTATTAAGGAGAACGAAATTACAGAGTTTACAGAATGAGTGTCATAATACGATTAGGTTTAATTCGAGTTTATATATGCACTCTCATTAAACACTATTACAGAATGCGTAAGCATTAAACAAAAAGAGGATATAGATGCACGCTGCGGAAACAGAATGCTAATGCGCAAACACATGCGGAATGCATTGTAGCAATGCGCTGTAATGTGAGATGCATTTTCGGGCGGGATATGCTAAGCGAGAGCCCCGCTTACTAATCGCAGGACATCAATGCATTCAAGGCATAATACAACAATATGTGAATTTAGTTTTCATTTGATGTTTGACATTTTAAAAAGAACATGTTTAGTCATCGTCACTTGAGTTTGAATTCTATAGTTTGAAATTTAGAAATGTTAAAGAGAAACAAAATTTAAATCTCAAGTACGAAATCATCCAATAGAAACAAATTTTAAATGCGAGGACAAAAATTGTATCTGGTCTTCAAGCTTTTAGATTTGTAAATTAATGTCTCATTGATTATTAAATTTCAAGAAATCTCCAACTTTTTTTTTTTTGAAACACTAGCTGTTTTTTAAACTTTCATGCTAGGTTCTTAAACTTTAGAACTGTTTTTTTTTATTTCGAACTCAATTTAGTGACTGTATCACATATTCAACGTTTAATAATTAATAGCTTTCTTTGTTAGAAAAATTAATGGATGTGTTATGCCTAAATGCAATGTTTTAATCTAGGATGATCCCTGATGTAATGGTAATTGATGGCTGTCCCATACAAAATGTTTAAGTGTACATAAGCTAATCTAAATATCGACGAATATAATAAAAAAAGTGTCGAATAGCATCTAAACTTGCTCATGGATTTAGAGGAGCAAACCTCCGAGTTCCTTAAAATTTAGGGATGTTAATACAAAAAATGAAAATTTTAAAAAATCCTAGTAAATTTTTTAAGAGTTAAGAAACAAATTAAATACGTTCTAAGTACTAAATTTTTCTAGAGAATTATTACAATTAAAATAGGAGTGTGAATTCACAAATGTTATGTGTTTGACTAAATTTTACATTTGTTTTCATATATGTGTGTGTATGACACACATCTATATGCAGGTGGAGTGAAGATTTTAAACTTCCAACACATTGTTTGGTATCTCAACTAATTTATTATGTTGAGTTAATTGTTCTAGTGAAAACTTATTAATCTTGAGAATTTAAATTTATGATCTTTTGATTTTGATATCGTTGAATCATTGCATCTGCAATAATAATCGGTCCGGATAAAATGGATGACAACTCATTTAAATAGCAATCTACCCATTACAAACAAAATTCCAACCAATTTCAATTAACTTGCTATAAAATTTTACCCTTTTACATATCTAGTTAGGATTTTGAAGCATTTGTAAAGCTGGCACAAATTAGAAAAAAAAAAAATCCATAATCGTATACATAAAAGAACAACAATTCTTTCATTGGTCAAACTTTGGGTGGGTCACTAACTTTAATGTTTTTCCTTGAACAAGAAACTACTTTTTGAAAGTTGAAATAATGGAATATTTGGTAGATGGGGTTTCTATCTGAAGGCTGTGCCGTTTTTAGGAAAAGCAACCCAAGCAATATTTTAGGATATCAATTCCAATTTTTTATTAGTGCAATAGGGGATTGGGAGAATGAAGTACATAATTTATGGTTATTAGTACATCAAGGTGCTAGTGAATTTAAATTAAATAGATATAGTTTTTGTCAAAACAAAAATGCCTACAATTATGAAACCTTGAAGTTATCAACTTTCTTACTATGGATTTTGCTGGTTTGCAGGCTATGTATGGTGGGTATATGGTAGCATTTGCAGGGCAGAAATATGCAGCAAGATCTCTCCCAGTAATGATTACTGATAATTCTCACACCATTACCAGTTTCACTTTGGTAAGCCCATAAAGCAAATGCAAGGAAAAGAAAAATAAAAGTAGAAGTAAAAAATCACCATCTTAATATTAACAAAAATGTTGCTTGTGTCTACTTTACTTTCCAGGTATTTGAATTTCAACAAGGCACTCTTCAAAACCTGTTCTGGAGGAAATTTGGGTGTGATAAATGTTCTGGGCAGTTTTCGGATTGCGTTGACAACCAAGACTGTGCAGTTCAAAGCTCGAAATGTAAGTACAATGGTGGTTCAGTTGACTGCAGTATGAGCATACAACTAGCCTTTTCAGGTACAGACAAGAACCTGGAAGTCCTCAACTCCTGGTTTGAAGTTGACAATCTCAGGCGCTTCTCCCTCTTCGATCTTTTCTCCGATCTTCGTGATACGATCACAAATCCATTCGGGTAAACATCTTTTCACATCTTCAGCTCTGATGGCATGGG

mRNA sequence

CTCTCCTCCAAACCCTACAGATGGTTAGCGAAATCGCCGCGATGACGACGGCGGTGGCTTTGGTTGCGACGGCGGTTATTTTGGTGGCGGAAGGGGCGGATACGAACGATGTGTACAGTCCGTGTTTGGATGCGAAGATTCAGAGATCGGACGGGTTTACTTTTGCCGTAGCGTTTTCGTCCAAGGAATCGTTCTTTCAGGATCAGATCCAATTTTCGCCTTGTGATCGGCGTTTGGCTTTGGCGTCCAAAACCGCTCAGCTTGCTGTTTTCAGGCCTAAGGTCGATCAGCTCGCTTTCCTCACCATTAACAGCACCACCTTCAATCCGGCTATGTATGGTGGGTATATGGTAGCATTTGCAGGGCAGAAATATGCAGCAAGATCTCTCCCAGTAATGATTACTGATAATTCTCACACCATTACCAGTTTCACTTTGGTATTTGAATTTCAACAAGGCACTCTTCAAAACCTGTTCTGGAGGAAATTTGGGTGTGATAAATGTTCTGGGCAGTTTTCGGATTGCGTTGACAACCAAGACTGTGCAGTTCAAAGCTCGAAATGTAAGTACAATGGTGGTTCAGTTGACTGCAGTATGAGCATACAACTAGCCTTTTCAGGTACAGACAAGAACCTGGAAGTCCTCAACTCCTGGTTTGAAGTTGACAATCTCAGGCGCTTCTCCCTCTTCGATCTTTTCTCCGATCTTCGTGATACGATCACAAATCCATTCGGGTAAACATCTTTTCACATCTTCAGCTCTGATGGCATGGG

Coding sequence (CDS)

ATGGTTAGCGAAATCGCCGCGATGACGACGGCGGTGGCTTTGGTTGCGACGGCGGTTATTTTGGTGGCGGAAGGGGCGGATACGAACGATGTGTACAGTCCGTGTTTGGATGCGAAGATTCAGAGATCGGACGGGTTTACTTTTGCCGTAGCGTTTTCGTCCAAGGAATCGTTCTTTCAGGATCAGATCCAATTTTCGCCTTGTGATCGGCGTTTGGCTTTGGCGTCCAAAACCGCTCAGCTTGCTGTTTTCAGGCCTAAGGTCGATCAGCTCGCTTTCCTCACCATTAACAGCACCACCTTCAATCCGGCTATGTATGGTGGGTATATGGTAGCATTTGCAGGGCAGAAATATGCAGCAAGATCTCTCCCAGTAATGATTACTGATAATTCTCACACCATTACCAGTTTCACTTTGGTATTTGAATTTCAACAAGGCACTCTTCAAAACCTGTTCTGGAGGAAATTTGGGTGTGATAAATGTTCTGGGCAGTTTTCGGATTGCGTTGACAACCAAGACTGTGCAGTTCAAAGCTCGAAATGTAAGTACAATGGTGGTTCAGTTGACTGCAGTATGAGCATACAACTAGCCTTTTCAGGTACAGACAAGAACCTGGAAGTCCTCAACTCCTGGTTTGAAGTTGACAATCTCAGGCGCTTCTCCCTCTTCGATCTTTTCTCCGATCTTCGTGATACGATCACAAATCCATTCGGGTAA

Protein sequence

MVSEIAAMTTAVALVATAVILVAEGADTNDVYSPCLDAKIQRSDGFTFAVAFSSKESFFQDQIQFSPCDRRLALASKTAQLAVFRPKVDQLAFLTINSTTFNPAMYGGYMVAFAGQKYAARSLPVMITDNSHTITSFTLVFEFQQGTLQNLFWRKFGCDKCSGQFSDCVDNQDCAVQSSKCKYNGGSVDCSMSIQLAFSGTDKNLEVLNSWFEVDNLRRFSLFDLFSDLRDTITNPFG

Homology

[Close]

BLAST of Sed0020808 vs. NCBI nr
Match: XP_008459230.1 (PREDICTED: uncharacterized protein LOC103498418 [Cucumis melo] >XP_008459231.1 PREDICTED: uncharacterized protein LOC103498418 [Cucumis melo] >KAA0045993.1 uncharacterized protein E6C27_scaffold243G005520 [Cucumis melo var. makuwa] >TYK13592.1 uncharacterized protein E5676_scaffold299G00800 [Cucumis melo var. makuwa])

HSP 1 Score: 403.7 bits (1036), Expect = 1.1e-108
Identity = 193/227 (85.02%), Postives = 215/227 (94.71%), Query Frame = 0


Query: 12  VALVATAVILVAEGADTNDVYSPCLDAKIQRSDGFTFAVAFSSKESFFQDQIQFSPCDRR 71
           VALV T ++LVAEG DTNDVYSPCLD+KIQRSDGFTF VAFSSKESFFQDQIQFSPCD R
Sbjct: 9   VALVVTLLLLVAEGIDTNDVYSPCLDSKIQRSDGFTFGVAFSSKESFFQDQIQFSPCDAR 68

Query: 72  LALASKTAQLAVFRPKVDQLAFLTINSTTFNPAMYGGYMVAFAGQKYAARSLPVMITDNS 131
           L+LASK AQLAVFRPKVDQL+FLTI+++TFNPA+ GGYMVAFAGQKYAARSLPVM+TDNS
Sbjct: 69  LSLASKNAQLAVFRPKVDQLSFLTIDTSTFNPALNGGYMVAFAGQKYAARSLPVMVTDNS 128

Query: 132 HTITSFTLVFEFQQGTLQNLFWRKFGCDKCSGQFSDCVDNQDCAVQSSKCKYNGGSVDCS 191
           HTITSFTLVFEF++GTLQNLFW+KFGCDKCSG FS CVDNQDCA+ SSKCKY+GGSVDC+
Sbjct: 129 HTITSFTLVFEFERGTLQNLFWKKFGCDKCSGDFSLCVDNQDCAILSSKCKYSGGSVDCN 188

Query: 192 MSIQLAFSGTDKNLEVLNSWFEVDNLRRFSLFDLFSDLRDTITNPFG 239
           + IQLAFSGTDKNLEVLNSW+E+DNLRRFSL+ LFSD+RDT+TNPFG
Sbjct: 189 LGIQLAFSGTDKNLEVLNSWYEIDNLRRFSLYQLFSDVRDTVTNPFG 235

[Close]

BLAST of Sed0020808 vs. NCBI nr
Match: XP_011649210.1 (uncharacterized protein LOC101222204 [Cucumis sativus] >XP_011649211.1 uncharacterized protein LOC101222204 [Cucumis sativus] >XP_031736519.1 uncharacterized protein LOC101222204 [Cucumis sativus] >XP_031736520.1 uncharacterized protein LOC101222204 [Cucumis sativus] >KAE8651859.1 hypothetical protein Csa_006582 [Cucumis sativus])

HSP 1 Score: 399.1 bits (1024), Expect = 2.8e-107
Identity = 193/227 (85.02%), Postives = 211/227 (92.95%), Query Frame = 0


Query: 12  VALVATAVILVAEGADTNDVYSPCLDAKIQRSDGFTFAVAFSSKESFFQDQIQFSPCDRR 71
           VALV T ++LV EG DTNDVYSPCLD+KIQRSDGFTF VAFSSKESFFQDQIQFSPCD R
Sbjct: 9   VALVVTLLLLVVEGIDTNDVYSPCLDSKIQRSDGFTFGVAFSSKESFFQDQIQFSPCDTR 68

Query: 72  LALASKTAQLAVFRPKVDQLAFLTINSTTFNPAMYGGYMVAFAGQKYAARSLPVMITDNS 131
           L+LASK AQL VFRPKVDQL+FLTINS+TFNPA+ GGYMVAFAGQKYAARSLPVMITDNS
Sbjct: 69  LSLASKMAQLVVFRPKVDQLSFLTINSSTFNPALNGGYMVAFAGQKYAARSLPVMITDNS 128

Query: 132 HTITSFTLVFEFQQGTLQNLFWRKFGCDKCSGQFSDCVDNQDCAVQSSKCKYNGGSVDCS 191
           +TITSFTLV EFQ+G LQNLFW+KFGCDKCSG FS CVDNQDCA+ +SKCKYNGGSVDC+
Sbjct: 129 NTITSFTLVLEFQRGILQNLFWKKFGCDKCSGDFSLCVDNQDCAIPNSKCKYNGGSVDCN 188

Query: 192 MSIQLAFSGTDKNLEVLNSWFEVDNLRRFSLFDLFSDLRDTITNPFG 239
           + IQLAFSGTDKNLEVLNSW+EVDNLRRFSL+ LFSD+RDT+TNPFG
Sbjct: 189 LGIQLAFSGTDKNLEVLNSWYEVDNLRRFSLYQLFSDVRDTVTNPFG 235

[Close]

BLAST of Sed0020808 vs. NCBI nr
Match: XP_038877911.1 (uncharacterized protein LOC120070122 [Benincasa hispida])

HSP 1 Score: 397.9 bits (1021), Expect = 6.2e-107
Identity = 194/228 (85.09%), Postives = 214/228 (93.86%), Query Frame = 0


Query: 12  VALVATAVILVA-EGADTNDVYSPCLDAKIQRSDGFTFAVAFSSKESFFQDQIQFSPCDR 71
           VAL+   ++L+A EG +TND+YSPCLD+KIQRSDGFTF VAFSSKESFFQDQIQ SPCD 
Sbjct: 9   VALIVMLLLLLAVEGINTNDIYSPCLDSKIQRSDGFTFGVAFSSKESFFQDQIQLSPCDS 68

Query: 72  RLALASKTAQLAVFRPKVDQLAFLTINSTTFNPAMYGGYMVAFAGQKYAARSLPVMITDN 131
           RLALASK AQLAVFRP+VDQL+FLTINS+TFNPAM GGYMVAFAG+KYAARSLPVMITDN
Sbjct: 69  RLALASKNAQLAVFRPEVDQLSFLTINSSTFNPAMNGGYMVAFAGKKYAARSLPVMITDN 128

Query: 132 SHTITSFTLVFEFQQGTLQNLFWRKFGCDKCSGQFSDCVDNQDCAVQSSKCKYNGGSVDC 191
           SHTITSFTLVFEFQ+GTLQNL W+KFGCDKCSG FS C+DNQDCAVQSSKCKYNGGSVDC
Sbjct: 129 SHTITSFTLVFEFQKGTLQNLLWKKFGCDKCSGDFSVCLDNQDCAVQSSKCKYNGGSVDC 188

Query: 192 SMSIQLAFSGTDKNLEVLNSWFEVDNLRRFSLFDLFSDLRDTITNPFG 239
           ++SIQLAFSGTDKNLEVLNSW+EVDNLRRFSL+ LFSD+RDT+TNPFG
Sbjct: 189 NLSIQLAFSGTDKNLEVLNSWYEVDNLRRFSLYKLFSDVRDTVTNPFG 236

[Close]

BLAST of Sed0020808 vs. NCBI nr
Match: XP_022944397.1 (uncharacterized protein LOC111448855 [Cucurbita moschata])

HSP 1 Score: 394.4 bits (1012), Expect = 6.8e-106
Identity = 190/230 (82.61%), Postives = 210/230 (91.30%), Query Frame = 0


Query: 9   TTAVALVATAVILVAEGADTNDVYSPCLDAKIQRSDGFTFAVAFSSKESFFQDQIQFSPC 68
           T  V LV T ++LVAEG DTNDVYSPCLDAKIQ+SDGFTF +AFSSKE+FFQDQIQFSPC
Sbjct: 12  TVTVVLVVTVLVLVAEGIDTNDVYSPCLDAKIQKSDGFTFGIAFSSKEAFFQDQIQFSPC 71

Query: 69  DRRLALASKTAQLAVFRPKVDQLAFLTINSTTFNPAMYGGYMVAFAGQKYAARSLPVMIT 128
           D RLAL  K  QLA+FRPKVDQL+ LTINSTTFNPAM GGYMVAFAG KYAARSLPVMIT
Sbjct: 72  DSRLALIYKNTQLALFRPKVDQLSLLTINSTTFNPAMNGGYMVAFAGLKYAARSLPVMIT 131

Query: 129 DNSHTITSFTLVFEFQQGTLQNLFWRKFGCDKCSGQFSDCVDNQDCAVQSSKCKYNGGSV 188
           DNSHTITSFTLVFEFQ+GTLQNLFW+K+GC+KC+G FS C+DNQDCAV SSKCKY+GGSV
Sbjct: 132 DNSHTITSFTLVFEFQRGTLQNLFWKKYGCEKCTGDFSVCLDNQDCAVSSSKCKYHGGSV 191

Query: 189 DCSMSIQLAFSGTDKNLEVLNSWFEVDNLRRFSLFDLFSDLRDTITNPFG 239
           DC++SIQLAFSGTD+NLEVLNSWFEVDNL RFSLF LF+D+RDT+TNPFG
Sbjct: 192 DCNISIQLAFSGTDRNLEVLNSWFEVDNLMRFSLFKLFADVRDTVTNPFG 241

[Close]

BLAST of Sed0020808 vs. NCBI nr
Match: KAG6571148.1 (hypothetical protein SDJN03_30063, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 394.4 bits (1012), Expect = 6.8e-106
Identity = 190/230 (82.61%), Postives = 210/230 (91.30%), Query Frame = 0


Query: 9   TTAVALVATAVILVAEGADTNDVYSPCLDAKIQRSDGFTFAVAFSSKESFFQDQIQFSPC 68
           T  V LV T ++LVAEG DTNDVYSPCLDAKIQ+SDGFTF +AFSSKE+FFQDQIQFSPC
Sbjct: 3   TVTVVLVVTVLVLVAEGIDTNDVYSPCLDAKIQKSDGFTFGIAFSSKEAFFQDQIQFSPC 62

Query: 69  DRRLALASKTAQLAVFRPKVDQLAFLTINSTTFNPAMYGGYMVAFAGQKYAARSLPVMIT 128
           D RLAL  K  QLA+FRPKVDQL+ LTINSTTFNPAM GGYMVAFAG KYAARSLPVMIT
Sbjct: 63  DSRLALIYKNTQLALFRPKVDQLSLLTINSTTFNPAMNGGYMVAFAGLKYAARSLPVMIT 122

Query: 129 DNSHTITSFTLVFEFQQGTLQNLFWRKFGCDKCSGQFSDCVDNQDCAVQSSKCKYNGGSV 188
           DNSHTITSFTLVFEFQ+GTLQNLFW+K+GC+KC+G FS C+DNQDCAV SSKCKY+GGSV
Sbjct: 123 DNSHTITSFTLVFEFQRGTLQNLFWKKYGCEKCTGDFSVCLDNQDCAVSSSKCKYHGGSV 182

Query: 189 DCSMSIQLAFSGTDKNLEVLNSWFEVDNLRRFSLFDLFSDLRDTITNPFG 239
           DC++SIQLAFSGTD+NLEVLNSWFEVDNL RFSLF LF+D+RDT+TNPFG
Sbjct: 183 DCNISIQLAFSGTDRNLEVLNSWFEVDNLMRFSLFKLFADVRDTVTNPFG 232

[Close]

BLAST of Sed0020808 vs. ExPASy TrEMBL
Match: A0A1S3CA87 (uncharacterized protein LOC103498418 OS=Cucumis melo OX=3656 GN=LOC103498418 PE=4 SV=1)

HSP 1 Score: 403.7 bits (1036), Expect = 5.4e-109
Identity = 193/227 (85.02%), Postives = 215/227 (94.71%), Query Frame = 0


Query: 12  VALVATAVILVAEGADTNDVYSPCLDAKIQRSDGFTFAVAFSSKESFFQDQIQFSPCDRR 71
           VALV T ++LVAEG DTNDVYSPCLD+KIQRSDGFTF VAFSSKESFFQDQIQFSPCD R
Sbjct: 9   VALVVTLLLLVAEGIDTNDVYSPCLDSKIQRSDGFTFGVAFSSKESFFQDQIQFSPCDAR 68

Query: 72  LALASKTAQLAVFRPKVDQLAFLTINSTTFNPAMYGGYMVAFAGQKYAARSLPVMITDNS 131
           L+LASK AQLAVFRPKVDQL+FLTI+++TFNPA+ GGYMVAFAGQKYAARSLPVM+TDNS
Sbjct: 69  LSLASKNAQLAVFRPKVDQLSFLTIDTSTFNPALNGGYMVAFAGQKYAARSLPVMVTDNS 128

Query: 132 HTITSFTLVFEFQQGTLQNLFWRKFGCDKCSGQFSDCVDNQDCAVQSSKCKYNGGSVDCS 191
           HTITSFTLVFEF++GTLQNLFW+KFGCDKCSG FS CVDNQDCA+ SSKCKY+GGSVDC+
Sbjct: 129 HTITSFTLVFEFERGTLQNLFWKKFGCDKCSGDFSLCVDNQDCAILSSKCKYSGGSVDCN 188

Query: 192 MSIQLAFSGTDKNLEVLNSWFEVDNLRRFSLFDLFSDLRDTITNPFG 239
           + IQLAFSGTDKNLEVLNSW+E+DNLRRFSL+ LFSD+RDT+TNPFG
Sbjct: 189 LGIQLAFSGTDKNLEVLNSWYEIDNLRRFSLYQLFSDVRDTVTNPFG 235

[Close]

BLAST of Sed0020808 vs. ExPASy TrEMBL
Match: A0A5D3CQC8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G00800 PE=4 SV=1)

HSP 1 Score: 403.7 bits (1036), Expect = 5.4e-109
Identity = 193/227 (85.02%), Postives = 215/227 (94.71%), Query Frame = 0


Query: 12  VALVATAVILVAEGADTNDVYSPCLDAKIQRSDGFTFAVAFSSKESFFQDQIQFSPCDRR 71
           VALV T ++LVAEG DTNDVYSPCLD+KIQRSDGFTF VAFSSKESFFQDQIQFSPCD R
Sbjct: 9   VALVVTLLLLVAEGIDTNDVYSPCLDSKIQRSDGFTFGVAFSSKESFFQDQIQFSPCDAR 68

Query: 72  LALASKTAQLAVFRPKVDQLAFLTINSTTFNPAMYGGYMVAFAGQKYAARSLPVMITDNS 131
           L+LASK AQLAVFRPKVDQL+FLTI+++TFNPA+ GGYMVAFAGQKYAARSLPVM+TDNS
Sbjct: 69  LSLASKNAQLAVFRPKVDQLSFLTIDTSTFNPALNGGYMVAFAGQKYAARSLPVMVTDNS 128

Query: 132 HTITSFTLVFEFQQGTLQNLFWRKFGCDKCSGQFSDCVDNQDCAVQSSKCKYNGGSVDCS 191
           HTITSFTLVFEF++GTLQNLFW+KFGCDKCSG FS CVDNQDCA+ SSKCKY+GGSVDC+
Sbjct: 129 HTITSFTLVFEFERGTLQNLFWKKFGCDKCSGDFSLCVDNQDCAILSSKCKYSGGSVDCN 188

Query: 192 MSIQLAFSGTDKNLEVLNSWFEVDNLRRFSLFDLFSDLRDTITNPFG 239
           + IQLAFSGTDKNLEVLNSW+E+DNLRRFSL+ LFSD+RDT+TNPFG
Sbjct: 189 LGIQLAFSGTDKNLEVLNSWYEIDNLRRFSLYQLFSDVRDTVTNPFG 235

[Close]

BLAST of Sed0020808 vs. ExPASy TrEMBL
Match: A0A6J1FVK1 (uncharacterized protein LOC111448855 OS=Cucurbita moschata OX=3662 GN=LOC111448855 PE=4 SV=1)

HSP 1 Score: 394.4 bits (1012), Expect = 3.3e-106
Identity = 190/230 (82.61%), Postives = 210/230 (91.30%), Query Frame = 0


Query: 9   TTAVALVATAVILVAEGADTNDVYSPCLDAKIQRSDGFTFAVAFSSKESFFQDQIQFSPC 68
           T  V LV T ++LVAEG DTNDVYSPCLDAKIQ+SDGFTF +AFSSKE+FFQDQIQFSPC
Sbjct: 12  TVTVVLVVTVLVLVAEGIDTNDVYSPCLDAKIQKSDGFTFGIAFSSKEAFFQDQIQFSPC 71

Query: 69  DRRLALASKTAQLAVFRPKVDQLAFLTINSTTFNPAMYGGYMVAFAGQKYAARSLPVMIT 128
           D RLAL  K  QLA+FRPKVDQL+ LTINSTTFNPAM GGYMVAFAG KYAARSLPVMIT
Sbjct: 72  DSRLALIYKNTQLALFRPKVDQLSLLTINSTTFNPAMNGGYMVAFAGLKYAARSLPVMIT 131

Query: 129 DNSHTITSFTLVFEFQQGTLQNLFWRKFGCDKCSGQFSDCVDNQDCAVQSSKCKYNGGSV 188
           DNSHTITSFTLVFEFQ+GTLQNLFW+K+GC+KC+G FS C+DNQDCAV SSKCKY+GGSV
Sbjct: 132 DNSHTITSFTLVFEFQRGTLQNLFWKKYGCEKCTGDFSVCLDNQDCAVSSSKCKYHGGSV 191

Query: 189 DCSMSIQLAFSGTDKNLEVLNSWFEVDNLRRFSLFDLFSDLRDTITNPFG 239
           DC++SIQLAFSGTD+NLEVLNSWFEVDNL RFSLF LF+D+RDT+TNPFG
Sbjct: 192 DCNISIQLAFSGTDRNLEVLNSWFEVDNLMRFSLFKLFADVRDTVTNPFG 241

[Close]

BLAST of Sed0020808 vs. ExPASy TrEMBL
Match: A0A6J1JGG7 (uncharacterized protein LOC111484289 OS=Cucurbita maxima OX=3661 GN=LOC111484289 PE=4 SV=1)

HSP 1 Score: 391.7 bits (1005), Expect = 2.1e-105
Identity = 189/233 (81.12%), Postives = 210/233 (90.13%), Query Frame = 0


Query: 6   AAMTTAVALVATAVILVAEGADTNDVYSPCLDAKIQRSDGFTFAVAFSSKESFFQDQIQF 65
           A  T  V LV T ++LVAEG DTN++YSPCLDAKIQ+SDGFTF +AFSSKE+FFQDQIQF
Sbjct: 12  AMRTVTVVLVVTVLVLVAEGTDTNEIYSPCLDAKIQKSDGFTFGLAFSSKEAFFQDQIQF 71

Query: 66  SPCDRRLALASKTAQLAVFRPKVDQLAFLTINSTTFNPAMYGGYMVAFAGQKYAARSLPV 125
           SPCD RLAL  K  QLA+FRPKVDQL+ LTINSTTFNPAM GGYMVAFAG KYAARSLPV
Sbjct: 72  SPCDSRLALVYKNTQLALFRPKVDQLSLLTINSTTFNPAMNGGYMVAFAGLKYAARSLPV 131

Query: 126 MITDNSHTITSFTLVFEFQQGTLQNLFWRKFGCDKCSGQFSDCVDNQDCAVQSSKCKYNG 185
           MITDNSHTITSFTLVFEFQ+GTLQNLFW+K+GC+KC+G FS C+DNQDC V SSKCKY+G
Sbjct: 132 MITDNSHTITSFTLVFEFQRGTLQNLFWKKYGCEKCTGDFSVCLDNQDCVVSSSKCKYHG 191

Query: 186 GSVDCSMSIQLAFSGTDKNLEVLNSWFEVDNLRRFSLFDLFSDLRDTITNPFG 239
           GSVDC++SIQLAFSGTD+NLEVLNSWFEVDNL RFSLF LFSD+RDT+TNPFG
Sbjct: 192 GSVDCNISIQLAFSGTDRNLEVLNSWFEVDNLMRFSLFKLFSDVRDTVTNPFG 244

[Close]

BLAST of Sed0020808 vs. ExPASy TrEMBL
Match: A0A6J1D4C1 (uncharacterized protein LOC111017155 OS=Momordica charantia OX=3673 GN=LOC111017155 PE=4 SV=1)

HSP 1 Score: 391.7 bits (1005), Expect = 2.1e-105
Identity = 194/242 (80.17%), Postives = 219/242 (90.50%), Query Frame = 0


Query: 5   IAAMTTA-VALVATAVILVAEGADTNDVYSPCLDAKIQRSDGFTFAVAFSSKESFFQDQI 64
           +AAM TA +AL A  +ILVAEG DTNDV+SPCLDAK+QRSDGFTF VAFSSKESFFQDQI
Sbjct: 1   MAAMRTATMALAAMMLILVAEGTDTNDVFSPCLDAKVQRSDGFTFGVAFSSKESFFQDQI 60

Query: 65  QFSPCDRRLALASKTAQLAVFRPKVDQLAFLTINSTTFNPAMYGGYMVAFAGQKYAARSL 124
           QFSPCDRRL LASK AQL VFRP+VDQL+ LTINSTTFNPA+YGGYMVAFAGQKYAARSL
Sbjct: 61  QFSPCDRRLGLASKNAQLVVFRPRVDQLSLLTINSTTFNPALYGGYMVAFAGQKYAARSL 120

Query: 125 PVMITDNSHTITSFTLVFEFQQGTLQNLFWRKFGCDKCSGQFSDCVDNQDCAVQSSKCKY 184
           PV+ITDNS+TITSFTLV EFQ+GTLQNLFW+KFGCDKC+G +S C+DNQDCAV ++KCK+
Sbjct: 121 PVLITDNSNTITSFTLVLEFQKGTLQNLFWKKFGCDKCTGDYSVCLDNQDCAVPNTKCKF 180

Query: 185 NGGSVDCSMSIQLAFSGTDKNLEVLNSWFEVDNLRRFSLFDLFSDLR-------DTITNP 239
           NGGS+DC++SIQLAFSGTD+NLEVLNSWFEVDNLRR+SL+ LFSD+R       DTITNP
Sbjct: 181 NGGSIDCNLSIQLAFSGTDRNLEVLNSWFEVDNLRRYSLYKLFSDVRDTISDVHDTITNP 240

[Close]

BLAST of Sed0020808 vs. TAIR 10
Match: AT3G44150.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11800.1); Has 76 Blast hits to 75 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 269.6 bits (688), Expect = 2.4e-72
Identity = 135/237 (56.96%), Postives = 182/237 (76.79%), Query Frame = 0


Query: 10  TAVALVATAVIL-VAEGAD------TNDVYSPCLDAKIQRSDGFTFAVAFSSKESFFQDQ 69
           T   LV +AVIL VA G D      TN +YSPC D +IQRSDGFTF +AFSS+ SFF +Q
Sbjct: 6   TLTLLVFSAVILTVALGGDSGGSGNTNTIYSPCSDTRIQRSDGFTFGIAFSSRPSFFINQ 65

Query: 70  -IQFSPCDRRLALASKTAQLAVFRPKVDQLAFLTINSTTFNPAMYGGYMVAFAGQKYAAR 129
            +  SPCDRRL+LA+  +Q +VFRPK+D+++ L+IN++ F P  YGGYMVAFAG+KYAAR
Sbjct: 66  TVLLSPCDRRLSLAAMNSQFSVFRPKIDEISLLSINTSAFFPDNYGGYMVAFAGRKYAAR 125

Query: 130 SLPVMITDNSHTITSFTLVFEFQQGTLQNLFWRKFGCDKCSG-QFSDCVDNQDCAVQSSK 189
           S+P  I +++  +TSFTLV EFQ+G LQNL+W++ GC  C G Q   C++ QDCA+++  
Sbjct: 126 SIPAFIANSTFIVTSFTLVMEFQKGRLQNLYWKRDGCASCKGNQNFVCLNKQDCAIRTPS 185

Query: 190 CKYNGGSVDCSMSIQLAFSGTDKNLEVLNSWFEVDNLRRFSLFDLFSDLRDTITNPF 238
           CK  GG+VDCS+ IQLAFSGTDK+L VLNSW+EV+NL+++SL+ L+S+L+ ++TN F
Sbjct: 186 CKGRGGAVDCSLGIQLAFSGTDKHLAVLNSWYEVENLKQYSLYGLYSNLKSSLTNQF 242

[Close]

BLAST of Sed0020808 vs. TAIR 10
Match: AT2G15910.1 (CSL zinc finger domain-containing protein )

HSP 1 Score: 262.7 bits (670), Expect = 2.9e-70
Identity = 129/241 (53.53%), Postives = 176/241 (73.03%), Query Frame = 0


Query: 9   TTAVALVATAVILVAE---GADTNDVYSPCLDAKIQRSDGFTFAVAFSSKESFFQDQIQF 68
           +T + ++   V++V +    AD N VYSPC D +I + DGFT  +A SSKE+FF DQ+Q 
Sbjct: 123 STTIMMIMMIVMMVDDWVGAADNNPVYSPCSDTQISKGDGFTIGIAISSKEAFFLDQVQL 182

Query: 69  SPCDRRLALASKTAQLAVFRPKVDQLAFLTINSTTFNPAMYGGYMVAFAGQKYAARSLPV 128
           SPCD RL LA+K AQLA+FRPKVD+++ L+I+++ FNP+  GG+MV FAG KYAARS PV
Sbjct: 183 SPCDTRLGLAAKMAQLALFRPKVDEISLLSIDTSKFNPSEAGGFMVGFAGSKYAARSYPV 242

Query: 129 MITDNSHTITSFT---------LVFEFQQGTLQNLFWRKFGCDKCSGQFSD---CVDNQD 188
            + D S+TIT+FT         LV EFQ+G LQNLFW+ FGCD C G  S    C++  D
Sbjct: 243 KVADGSNTITAFTLVMKLTLSPLVLEFQKGVLQNLFWKSFGCDLCKGTGSSSSVCLNGTD 302

Query: 189 CAVQSSKCKYNGGSVDCSMSIQLAFSGTDKNLEVLNSWFEVDNLRRFSLFDLFSDLRDTI 235
           CAV +SKCK NGG  +C++ IQ+AFSGTD+NLE LN+W+EV+NLR++SL DL+++  D++
Sbjct: 303 CAVPTSKCKANGGQANCNIGIQVAFSGTDRNLESLNTWYEVNNLRQYSLTDLYANAVDSL 362

[Close]

BLAST of Sed0020808 vs. TAIR 10
Match: AT3G11800.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G44150.1); Has 74 Blast hits to 73 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 256.5 bits (654), Expect = 2.1e-68
Identity = 120/224 (53.57%), Postives = 164/224 (73.21%), Query Frame = 0


Query: 22  VAEGADTNDVYSPCLDAKIQRSDGFTFAVAFSSKESFF----QDQIQFSPCDRRLALASK 81
           + E  D N VYSPC D+ +   DGFTF +AF++K+SFF       +Q+SPCD R    + 
Sbjct: 19  LTEAGDNNQVYSPCSDSTVAIGDGFTFGIAFAAKDSFFSTNRSKSVQYSPCDHRHLSLNG 78

Query: 82  TAQLAVFRPKVDQLAFLTIN---STTFNPAMYGGYMVAFAGQKYAARSLPVMITDNSHTI 141
            +++AVFRPKVD++  LTIN   S++F P    GYMVAFAG KYAARSLP+M+ D++H +
Sbjct: 79  NSEVAVFRPKVDEITLLTINTSSSSSFRPDASKGYMVAFAGAKYAARSLPIMVADSNHIV 138

Query: 142 TSFTLVFEFQQGTLQNLFWRKFGCDKCSGQFS-DCVDNQDCAVQSSKCKYNGGSVDCSMS 201
           TSFTLV EFQ+G L+N+FW+K GC KCSG     C++ ++CA++   CK  GG VDCS+ 
Sbjct: 139 TSFTLVLEFQKGRLENMFWKKDGCSKCSGDSKFVCLNKEECAIKPQNCKNQGGQVDCSLG 198

Query: 202 IQLAFSGTDKNLEVLNSWFEVDNLRRFSLFDLFSDLRDTITNPF 238
           IQLAFSGTDK+   LNSW+EV NL+++SL+ L+S+L+D++TNPF
Sbjct: 199 IQLAFSGTDKHYTALNSWYEVANLKQYSLYGLYSNLKDSLTNPF 242

[Close]

BLAST of Sed0020808 vs. TAIR 10
Match: AT3G48630.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G44150.1); Has 64 Blast hits to 64 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 46.2 bits (108), Expect = 4.2e-05
Identity = 21/52 (40.38%), Postives = 31/52 (59.62%), Query Frame = 0


Query: 109 YMVAFAGQKYAARSLPVMITDNSHTITSFTLVFEFQQGTLQNLFWRKFGCDK 161
           Y V   G +  +   P  I +++  +TSFT V EFQ+G LQNL+W++  C K
Sbjct: 2   YNVGTRGSEIRSEVDPAFIANSTFIVTSFTWVMEFQKGRLQNLYWKRDVCAK 53

The following BLAST results are available for this feature:

BLAST of Sed0020808 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008459230.1	1.1e-108	85.02	PREDICTED: uncharacterized protein LOC103498418 [Cucumis melo] >XP_008459231.1 P...	[more]
XP_011649210.1	2.8e-107	85.02	uncharacterized protein LOC101222204 [Cucumis sativus] >XP_011649211.1 uncharact...	[more]
XP_038877911.1	6.2e-107	85.09	uncharacterized protein LOC120070122 [Benincasa hispida]	[more]
XP_022944397.1	6.8e-106	82.61	uncharacterized protein LOC111448855 [Cucurbita moschata]	[more]
KAG6571148.1	6.8e-106	82.61	hypothetical protein SDJN03_30063, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Sed0020808 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0020808 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CA87	5.4e-109	85.02	uncharacterized protein LOC103498418 OS=Cucumis melo OX=3656 GN=LOC103498418 PE=...	[more]
A0A5D3CQC8	5.4e-109	85.02	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1FVK1	3.3e-106	82.61	uncharacterized protein LOC111448855 OS=Cucurbita moschata OX=3662 GN=LOC1114488...	[more]
A0A6J1JGG7	2.1e-105	81.12	uncharacterized protein LOC111484289 OS=Cucurbita maxima OX=3661 GN=LOC111484289...	[more]
A0A6J1D4C1	2.1e-105	80.17	uncharacterized protein LOC111017155 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]

BLAST of Sed0020808 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G44150.1	2.4e-72	56.96	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G15910.1	2.9e-70	53.53	CSL zinc finger domain-containing protein	[more]
AT3G11800.1	2.1e-68	53.57	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G48630.1	4.2e-05	40.38	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR044248	Diphthamide biosynthesis protein 3/4-like	PANTHER	PTHR21454	DPH3 HOMOLOG-RELATED	coord: 8..237
None	No IPR available	PANTHER	PTHR21454:SF33	SUBFAMILY NOT NAMED	coord: 8..237

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0020808.1	Sed0020808.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0017183	peptidyl-diphthamide biosynthetic process from peptidyl-histidine
biological_process	GO:0002098	tRNA wobble uridine modification
cellular_component	GO:0005829	cytosol
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding