Sed0020773 (gene) Chayote v1

Overview
NameSed0020773
Typegene
OrganismSechium edule (Chayote v1)
DescriptionNDR1/HIN1-like protein 6
LocationLG04: 43601453 .. 43602160 (+)
RNA-Seq ExpressionSed0020773
SyntenySed0020773
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGCGCCATCAAACCCGAAATATGTCATGCTGTCCGACGACAACCACCAAACCGGCCTCCGTCCTCCGCCCTACCGCCGCAACGTCCCCCGATACCACAACAAACCCCACGGCAGCAGCGGCGGGAACTGTTGCCTAAAATGCATCTGTTGCTGTTACTGTCTCATTATCCTCCTCATCGCCGCTCTGCTCGGCACCGTCTATTACGTCTATGCCTTCTACAACCCCCAGGTCCCTTCCTACAAAGTCGCTAACTTCAAAGTCCAAACCTTCAATGTCAAGCCCGATTTCAGCCTCTACACGGAATTCATCGTCATCGTCGACGCCGACAACCCGAACGAGAACATCGATTTCATCTACGGGAAAGACAGCTCGGTCTCTGTTGTGTACAATGAGTCGGAGCTGTGCGCGGGGACGATCCCGAATTTCCGGCAGCCGTCGAAGAACGTGACGGCGATAAGCATAATGCTGAGGGGGAAAAGCGAGTTCGGGTCGGGGCTGCAAGAGGCGGTGATGCAGAATAAACATACTAAGAAGATTCCTCTGCTTGTGGAGGTTAAGGTTCCGGTGACGGTTGTGATCGGAGGGCTGTCGTTGAGGAAGGTTACTGTTCTTGTTAATTGTTCGTTGGTGGTTGATAATTTGTCTCCGGATAAGAAAGTTGGGATTTTGTCCACTAATTATACTTATGCTGCTACCTTCTGA

mRNA sequence

ATGGAAGCGCCATCAAACCCGAAATATGTCATGCTGTCCGACGACAACCACCAAACCGGCCTCCGTCCTCCGCCCTACCGCCGCAACGTCCCCCGATACCACAACAAACCCCACGGCAGCAGCGGCGGGAACTGTTGCCTAAAATGCATCTGTTGCTGTTACTGTCTCATTATCCTCCTCATCGCCGCTCTGCTCGGCACCGTCTATTACGTCTATGCCTTCTACAACCCCCAGGTCCCTTCCTACAAAGTCGCTAACTTCAAAGTCCAAACCTTCAATGTCAAGCCCGATTTCAGCCTCTACACGGAATTCATCGTCATCGTCGACGCCGACAACCCGAACGAGAACATCGATTTCATCTACGGGAAAGACAGCTCGGTCTCTGTTGTGTACAATGAGTCGGAGCTGTGCGCGGGGACGATCCCGAATTTCCGGCAGCCGTCGAAGAACGTGACGGCGATAAGCATAATGCTGAGGGGGAAAAGCGAGTTCGGGTCGGGGCTGCAAGAGGCGGTGATGCAGAATAAACATACTAAGAAGATTCCTCTGCTTGTGGAGGTTAAGGTTCCGGTGACGGTTGTGATCGGAGGGCTGTCGTTGAGGAAGGTTACTGTTCTTGTTAATTGTTCGTTGGTGGTTGATAATTTGTCTCCGGATAAGAAAGTTGGGATTTTGTCCACTAATTATACTTATGCTGCTACCTTCTGA

Coding sequence (CDS)

ATGGAAGCGCCATCAAACCCGAAATATGTCATGCTGTCCGACGACAACCACCAAACCGGCCTCCGTCCTCCGCCCTACCGCCGCAACGTCCCCCGATACCACAACAAACCCCACGGCAGCAGCGGCGGGAACTGTTGCCTAAAATGCATCTGTTGCTGTTACTGTCTCATTATCCTCCTCATCGCCGCTCTGCTCGGCACCGTCTATTACGTCTATGCCTTCTACAACCCCCAGGTCCCTTCCTACAAAGTCGCTAACTTCAAAGTCCAAACCTTCAATGTCAAGCCCGATTTCAGCCTCTACACGGAATTCATCGTCATCGTCGACGCCGACAACCCGAACGAGAACATCGATTTCATCTACGGGAAAGACAGCTCGGTCTCTGTTGTGTACAATGAGTCGGAGCTGTGCGCGGGGACGATCCCGAATTTCCGGCAGCCGTCGAAGAACGTGACGGCGATAAGCATAATGCTGAGGGGGAAAAGCGAGTTCGGGTCGGGGCTGCAAGAGGCGGTGATGCAGAATAAACATACTAAGAAGATTCCTCTGCTTGTGGAGGTTAAGGTTCCGGTGACGGTTGTGATCGGAGGGCTGTCGTTGAGGAAGGTTACTGTTCTTGTTAATTGTTCGTTGGTGGTTGATAATTTGTCTCCGGATAAGAAAGTTGGGATTTTGTCCACTAATTATACTTATGCTGCTACCTTCTGA

Protein sequence

MEAPSNPKYVMLSDDNHQTGLRPPPYRRNVPRYHNKPHGSSGGNCCLKCICCCYCLIILLIAALLGTVYYVYAFYNPQVPSYKVANFKVQTFNVKPDFSLYTEFIVIVDADNPNENIDFIYGKDSSVSVVYNESELCAGTIPNFRQPSKNVTAISIMLRGKSEFGSGLQEAVMQNKHTKKIPLLVEVKVPVTVVIGGLSLRKVTVLVNCSLVVDNLSPDKKVGILSTNYTYAATF
Homology
BLAST of Sed0020773 vs. NCBI nr
Match: XP_038888833.1 (NDR1/HIN1-like protein 6 [Benincasa hispida])

HSP 1 Score: 367.1 bits (941), Expect = 1.1e-97
Identity = 179/235 (76.17%), Postives = 203/235 (86.38%), Query Frame = 0

Query: 1   MEAPSNPKYVMLSDDNHQTGLRPPPYRRNVPRYHNKPHGSSGG-NCCLKCICCCYCLIIL 60
           MEAP  PKYVMLSD++HQ  LRPPPYRRNVPRYH+K HG  GG  CCLKCICCCYC +  
Sbjct: 1   MEAPPKPKYVMLSDNHHQASLRPPPYRRNVPRYHSKAHGGGGGIGCCLKCICCCYCFLFF 60

Query: 61  LIAALLGTVYYVYAFYNPQVPSYKVANFKVQTFNVKPDFSLYTEFIVIVDADNPNENIDF 120
           +I AL G  Y+ + ++NPQ+PSYKV NF+V  FNVK DFSLYTEFIVIV ADNPNENIDF
Sbjct: 61  IIFALFGLGYFFFYYFNPQIPSYKVTNFRVHAFNVKSDFSLYTEFIVIVKADNPNENIDF 120

Query: 121 IYGKDSSVSVVYNESELCAGTIPNFRQPSKNVTAISIMLRGKSEFGSGLQEAVMQNKHTK 180
           IYG+DSSVSV+Y+ESELCAG IP+FRQP+KNVT ISIML G SEFGSGLQEA+MQN+H+ 
Sbjct: 121 IYGRDSSVSVMYSESELCAGKIPDFRQPAKNVTDISIMLSGNSEFGSGLQEALMQNRHSG 180

Query: 181 KIPLLVEVKVPVTVVIGGLSLRKVTVLVNCSLVVDNLSPDKKVGILSTNYTYAAT 235
           KIPLLVEVKVPVTVV+G LSL+KV V VNCSLVVDNLSP+KKVGILS+NYTY A+
Sbjct: 181 KIPLLVEVKVPVTVVVGSLSLKKVYVFVNCSLVVDNLSPNKKVGILSSNYTYGAS 235

BLAST of Sed0020773 vs. NCBI nr
Match: XP_008455332.1 (PREDICTED: NDR1/HIN1-Like protein 3-like [Cucumis melo])

HSP 1 Score: 366.3 bits (939), Expect = 2.0e-97
Identity = 182/238 (76.47%), Postives = 205/238 (86.13%), Query Frame = 0

Query: 1   MEAPSNPKYVMLSDDNHQTGLRPPPYRRNVPRYHNKPHGSSGG---NCCLKCICCCYCLI 60
           MEAP  PKYVMLSD++HQT LRPPPYRRNVPRY +K HG  GG    CCLKCICC YC I
Sbjct: 1   MEAPPKPKYVMLSDNHHQTSLRPPPYRRNVPRYQSKAHGGGGGGGVGCCLKCICCFYCFI 60

Query: 61  ILLIAALLGTVYYVYAFYNPQVPSYKVANFKVQTFNVKPDFSLYTEFIVIVDADNPNENI 120
             LI AL G  Y++Y +Y+PQ+PSYKV+NF V  FNVKPDFSLYTEFIVIV ADNPN+NI
Sbjct: 61  FFLIFALFGFGYFLYYYYDPQIPSYKVSNFSVHAFNVKPDFSLYTEFIVIVKADNPNQNI 120

Query: 121 DFIYGKDSSVSVVYNESELCAGTIPNFRQPSKNVTAISIMLRGKSEFGSGLQEAVMQNKH 180
            FIYGK+SSVSV+Y++SELC+G IPNFRQPSKNVT ISI+L G SEFGSGLQEA+MQN+H
Sbjct: 121 GFIYGKNSSVSVMYSKSELCSGKIPNFRQPSKNVTDISILLSGNSEFGSGLQEALMQNRH 180

Query: 181 TKKIPLLVEVKVPVTVVIGGLSLRKVTVLVNCSLVVDNLSPDKKVGILSTNYTYAATF 236
           + KIPLLVEVKVPVTVVIG LSL+KV VLVNCSLVVDNLSP+KKVGILS+NYTY A+F
Sbjct: 181 SGKIPLLVEVKVPVTVVIGSLSLKKVNVLVNCSLVVDNLSPNKKVGILSSNYTYGASF 238

BLAST of Sed0020773 vs. NCBI nr
Match: KAE8645768.1 (hypothetical protein Csa_020499 [Cucumis sativus])

HSP 1 Score: 359.4 bits (921), Expect = 2.4e-95
Identity = 178/237 (75.11%), Postives = 201/237 (84.81%), Query Frame = 0

Query: 1   MEAPSNPKYVMLSDDNHQTGLRPPPYRRNVPRYHNKPHGSSGG--NCCLKCICCCYCLII 60
           MEAP  PKYVMLSDD+HQ  LRPPPYRRNVPRYH+K +G  GG   CCLKCICCCYC I 
Sbjct: 1   MEAPPKPKYVMLSDDHHQASLRPPPYRRNVPRYHSKANGGGGGGVGCCLKCICCCYCFIF 60

Query: 61  LLIAALLGTVYYVYAFYNPQVPSYKVANFKVQTFNVKPDFSLYTEFIVIVDADNPNENID 120
            LI AL G  Y+++ +YNPQVPSYKV++F V  FNVK DFSLYTEFIVIV ADNPN NI 
Sbjct: 61  FLIFALFGLGYFLFYYYNPQVPSYKVSDFSVHAFNVKSDFSLYTEFIVIVKADNPNANIG 120

Query: 121 FIYGKDSSVSVVYNESELCAGTIPNFRQPSKNVTAISIMLRGKSEFGSGLQEAVMQNKHT 180
           F+YGKDSSVSV+Y++SELC+G IPNFRQPSKNVT ISI+L G SEFGSGLQEA+MQN+H+
Sbjct: 121 FVYGKDSSVSVMYSKSELCSGQIPNFRQPSKNVTDISILLSGNSEFGSGLQEALMQNRHS 180

Query: 181 KKIPLLVEVKVPVTVVIGGLSLRKVTVLVNCSLVVDNLSPDKKVGILSTNYTYAATF 236
            KIPLLV+VKVPVTVVIG LSL+KV V VNCSLVVD LSP+KKV ILS+NYTY A+F
Sbjct: 181 GKIPLLVKVKVPVTVVIGSLSLKKVNVFVNCSLVVDKLSPNKKVEILSSNYTYGASF 237

BLAST of Sed0020773 vs. NCBI nr
Match: XP_011658744.1 (NDR1/HIN1-like protein 6 [Cucumis sativus])

HSP 1 Score: 357.1 bits (915), Expect = 1.2e-94
Identity = 177/236 (75.00%), Postives = 200/236 (84.75%), Query Frame = 0

Query: 1   MEAPSNPKYVMLSDDNHQTGLRPPPYRRNVPRYHNKPHGSSGG--NCCLKCICCCYCLII 60
           MEAP  PKYVMLSDD+HQ  LRPPPYRRNVPRYH+K +G  GG   CCLKCICCCYC I 
Sbjct: 1   MEAPPKPKYVMLSDDHHQASLRPPPYRRNVPRYHSKANGGGGGGVGCCLKCICCCYCFIF 60

Query: 61  LLIAALLGTVYYVYAFYNPQVPSYKVANFKVQTFNVKPDFSLYTEFIVIVDADNPNENID 120
            LI AL G  Y+++ +YNPQVPSYKV++F V  FNVK DFSLYTEFIVIV ADNPN NI 
Sbjct: 61  FLIFALFGLGYFLFYYYNPQVPSYKVSDFSVHAFNVKSDFSLYTEFIVIVKADNPNANIG 120

Query: 121 FIYGKDSSVSVVYNESELCAGTIPNFRQPSKNVTAISIMLRGKSEFGSGLQEAVMQNKHT 180
           F+YGKDSSVSV+Y++SELC+G IPNFRQPSKNVT ISI+L G SEFGSGLQEA+MQN+H+
Sbjct: 121 FVYGKDSSVSVMYSKSELCSGQIPNFRQPSKNVTDISILLSGNSEFGSGLQEALMQNRHS 180

Query: 181 KKIPLLVEVKVPVTVVIGGLSLRKVTVLVNCSLVVDNLSPDKKVGILSTNYTYAAT 235
            KIPLLV+VKVPVTVVIG LSL+KV V VNCSLVVD LSP+KKV ILS+NYTY A+
Sbjct: 181 GKIPLLVKVKVPVTVVIGSLSLKKVNVFVNCSLVVDKLSPNKKVEILSSNYTYGAS 236

BLAST of Sed0020773 vs. NCBI nr
Match: XP_023554601.1 (NDR1/HIN1-like protein 6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 351.3 bits (900), Expect = 6.5e-93
Identity = 172/235 (73.19%), Postives = 198/235 (84.26%), Query Frame = 0

Query: 1   MEAPSNPKYVMLSDDNHQTGLRPPPYRRNVPRYHNKPHGSSGG--NCCLKCICCCYCLII 60
           M+    PKYVMLS DNHQ  LRPPPYRR+VPRYH+K HG  GG   CCLKCICCCYC ++
Sbjct: 1   MDTAPKPKYVMLS-DNHQGSLRPPPYRRHVPRYHSKTHGGGGGCAGCCLKCICCCYCFLL 60

Query: 61  LLIAALLGTVYYVYAFYNPQVPSYKVANFKVQTFNVKPDFSLYTEFIVIVDADNPNENID 120
            LI +L G  Y ++++YNPQ+PSYKV++F V+ F+VKPDFSLYTEFIVIV ADNPN+NID
Sbjct: 61  FLIFSLFGLAYVLFSYYNPQIPSYKVSSFNVRVFDVKPDFSLYTEFIVIVTADNPNQNID 120

Query: 121 FIYGKDSSVSVVYNESELCAGTIPNFRQPSKNVTAISIMLRGKSEFGSGLQEAVMQNKHT 180
           F+YGKDS VSV+YN+S LC G IPNFRQPSKNVT ISI L GKSEFGSGLQEA+MQN+H+
Sbjct: 121 FVYGKDSYVSVLYNQSVLCTGDIPNFRQPSKNVTDISISLTGKSEFGSGLQEALMQNRHS 180

Query: 181 KKIPLLVEVKVPVTVVIGGLSLRKVTVLVNCSLVVDNLSPDKKVGILSTNYTYAA 234
            +IPLLV VKVPVT+VIG LSL+KV V VNCSL+VDNLSPDKKVGILS NYTY A
Sbjct: 181 GRIPLLVVVKVPVTIVIGRLSLKKVNVFVNCSLIVDNLSPDKKVGILSNNYTYGA 234

BLAST of Sed0020773 vs. ExPASy Swiss-Prot
Match: Q8LD98 (NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=NHL6 PE=1 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 3.9e-24
Identity = 63/186 (33.87%), Postives = 104/186 (55.91%), Query Frame = 0

Query: 44  NCCLKCICCCYCLIILLIAALLGTVYYVYAFYNPQVPSYKVANFKVQTFNVKPDFSLYTE 103
           +CC +C C  +C ++LL+ A+  ++  +Y  + P++P Y +   ++  F +  D SL T 
Sbjct: 60  SCCCRCFCYTFCFLLLLVVAVGASIGILYLVFKPKLPDYSIDRLQLTRFALNQDSSLTTA 119

Query: 104 FIVIVDADNPNENIDFIYGKDSSVSVVYNESELCAGTIPNFRQPSKNVTAISIMLRGKSE 163
           F V + A NPNE I   Y   S ++V Y E +L  G++P F Q  +N T I + + G+++
Sbjct: 120 FNVTITAKNPNEKIGIYYEDGSKITVWYMEHQLSNGSLPKFYQGHENTTVIYVEMTGQTQ 179

Query: 164 FGSGLQEAV-MQNKHTKKIPLLVEVKVPVTVVIGGLSLRKVTVLVNCSLVVDNLSPDKKV 223
             SGL+  +  Q + T  IPL + V  PV V  G L L +V  LV C + VD+L+ +  +
Sbjct: 180 NASGLRTTLEEQQQRTGNIPLRIRVNQPVRVKFGKLKLFEVRFLVRCGVFVDSLATNNVI 239

Query: 224 GILSTN 229
            I S++
Sbjct: 240 KIQSSS 245

BLAST of Sed0020773 vs. ExPASy TrEMBL
Match: A0A1S3C0T7 (NDR1/HIN1-Like protein 3-like OS=Cucumis melo OX=3656 GN=LOC103495521 PE=4 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 9.5e-98
Identity = 182/238 (76.47%), Postives = 205/238 (86.13%), Query Frame = 0

Query: 1   MEAPSNPKYVMLSDDNHQTGLRPPPYRRNVPRYHNKPHGSSGG---NCCLKCICCCYCLI 60
           MEAP  PKYVMLSD++HQT LRPPPYRRNVPRY +K HG  GG    CCLKCICC YC I
Sbjct: 1   MEAPPKPKYVMLSDNHHQTSLRPPPYRRNVPRYQSKAHGGGGGGGVGCCLKCICCFYCFI 60

Query: 61  ILLIAALLGTVYYVYAFYNPQVPSYKVANFKVQTFNVKPDFSLYTEFIVIVDADNPNENI 120
             LI AL G  Y++Y +Y+PQ+PSYKV+NF V  FNVKPDFSLYTEFIVIV ADNPN+NI
Sbjct: 61  FFLIFALFGFGYFLYYYYDPQIPSYKVSNFSVHAFNVKPDFSLYTEFIVIVKADNPNQNI 120

Query: 121 DFIYGKDSSVSVVYNESELCAGTIPNFRQPSKNVTAISIMLRGKSEFGSGLQEAVMQNKH 180
            FIYGK+SSVSV+Y++SELC+G IPNFRQPSKNVT ISI+L G SEFGSGLQEA+MQN+H
Sbjct: 121 GFIYGKNSSVSVMYSKSELCSGKIPNFRQPSKNVTDISILLSGNSEFGSGLQEALMQNRH 180

Query: 181 TKKIPLLVEVKVPVTVVIGGLSLRKVTVLVNCSLVVDNLSPDKKVGILSTNYTYAATF 236
           + KIPLLVEVKVPVTVVIG LSL+KV VLVNCSLVVDNLSP+KKVGILS+NYTY A+F
Sbjct: 181 SGKIPLLVEVKVPVTVVIGSLSLKKVNVLVNCSLVVDNLSPNKKVGILSSNYTYGASF 238

BLAST of Sed0020773 vs. ExPASy TrEMBL
Match: A0A0A0K2B4 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G047380 PE=4 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 5.8e-95
Identity = 177/236 (75.00%), Postives = 200/236 (84.75%), Query Frame = 0

Query: 1   MEAPSNPKYVMLSDDNHQTGLRPPPYRRNVPRYHNKPHGSSGG--NCCLKCICCCYCLII 60
           MEAP  PKYVMLSDD+HQ  LRPPPYRRNVPRYH+K +G  GG   CCLKCICCCYC I 
Sbjct: 1   MEAPPKPKYVMLSDDHHQASLRPPPYRRNVPRYHSKANGGGGGGVGCCLKCICCCYCFIF 60

Query: 61  LLIAALLGTVYYVYAFYNPQVPSYKVANFKVQTFNVKPDFSLYTEFIVIVDADNPNENID 120
            LI AL G  Y+++ +YNPQVPSYKV++F V  FNVK DFSLYTEFIVIV ADNPN NI 
Sbjct: 61  FLIFALFGLGYFLFYYYNPQVPSYKVSDFSVHAFNVKSDFSLYTEFIVIVKADNPNANIG 120

Query: 121 FIYGKDSSVSVVYNESELCAGTIPNFRQPSKNVTAISIMLRGKSEFGSGLQEAVMQNKHT 180
           F+YGKDSSVSV+Y++SELC+G IPNFRQPSKNVT ISI+L G SEFGSGLQEA+MQN+H+
Sbjct: 121 FVYGKDSSVSVMYSKSELCSGQIPNFRQPSKNVTDISILLSGNSEFGSGLQEALMQNRHS 180

Query: 181 KKIPLLVEVKVPVTVVIGGLSLRKVTVLVNCSLVVDNLSPDKKVGILSTNYTYAAT 235
            KIPLLV+VKVPVTVVIG LSL+KV V VNCSLVVD LSP+KKV ILS+NYTY A+
Sbjct: 181 GKIPLLVKVKVPVTVVIGSLSLKKVNVFVNCSLVVDKLSPNKKVEILSSNYTYGAS 236

BLAST of Sed0020773 vs. ExPASy TrEMBL
Match: A0A6J1GLR6 (NDR1/HIN1-like protein 6 OS=Cucurbita moschata OX=3662 GN=LOC111455415 PE=4 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 3.9e-91
Identity = 170/235 (72.34%), Postives = 196/235 (83.40%), Query Frame = 0

Query: 1   MEAPSNPKYVMLSDDNHQTGLRPPPYRRNVPRYHNKPHGSSGG--NCCLKCICCCYCLII 60
           M+    PKYVMLS DNHQ  LRPPPYRR+VPRYH+K HG  GG   CCLKCICCCYC ++
Sbjct: 1   MDTAPKPKYVMLS-DNHQGSLRPPPYRRHVPRYHSKAHGGGGGCAGCCLKCICCCYCFLL 60

Query: 61  LLIAALLGTVYYVYAFYNPQVPSYKVANFKVQTFNVKPDFSLYTEFIVIVDADNPNENID 120
            LI +L G  Y ++++YNPQ+PSYKV++F V+ F+VKPDFSLYTEFIVIV ADNPN+NID
Sbjct: 61  FLIFSLFGLAYVLFSYYNPQIPSYKVSSFNVRVFDVKPDFSLYTEFIVIVTADNPNQNID 120

Query: 121 FIYGKDSSVSVVYNESELCAGTIPNFRQPSKNVTAISIMLRGKSEFGSGLQEAVMQNKHT 180
           F+YGK S VSV+YN+S LC G IPNFRQPSKNVT ISI L GKSEFGSG QEA+MQN+H+
Sbjct: 121 FVYGKGSYVSVLYNQSVLCTGDIPNFRQPSKNVTDISISLTGKSEFGSGPQEALMQNRHS 180

Query: 181 KKIPLLVEVKVPVTVVIGGLSLRKVTVLVNCSLVVDNLSPDKKVGILSTNYTYAA 234
            +IPLLV VKVPVT+VIG LSL+KV V VNCSL+VDNLSPDKKVGILSTN TY A
Sbjct: 181 GRIPLLVVVKVPVTIVIGRLSLKKVNVFVNCSLIVDNLSPDKKVGILSTNSTYGA 234

BLAST of Sed0020773 vs. ExPASy TrEMBL
Match: A0A6J1I215 (NDR1/HIN1-like protein 6 OS=Cucurbita maxima OX=3661 GN=LOC111468301 PE=4 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 1.5e-90
Identity = 168/235 (71.49%), Postives = 196/235 (83.40%), Query Frame = 0

Query: 1   MEAPSNPKYVMLSDDNHQTGLRPPPYRRNVPRYHNKPHGSSGG--NCCLKCICCCYCLII 60
           M+    PKYVMLS DNHQ  LRPPPYRR+VPRYH+K  G  GG   CCLKCICCCYC ++
Sbjct: 1   MDTAPKPKYVMLS-DNHQGSLRPPPYRRHVPRYHSKAQGGGGGCAGCCLKCICCCYCFLL 60

Query: 61  LLIAALLGTVYYVYAFYNPQVPSYKVANFKVQTFNVKPDFSLYTEFIVIVDADNPNENID 120
            LI +L G  Y ++++YNPQ+PSY+V++F V+ F+VKPDFSLYTEFIVIV ADNPN+NID
Sbjct: 61  FLIFSLFGLAYVLFSYYNPQIPSYEVSSFNVRVFDVKPDFSLYTEFIVIVTADNPNQNID 120

Query: 121 FIYGKDSSVSVVYNESELCAGTIPNFRQPSKNVTAISIMLRGKSEFGSGLQEAVMQNKHT 180
           F+YGK S VSV+YN+S LC G IPNFRQPSKNVT ISI L G SEFGSGLQEA+MQN+H+
Sbjct: 121 FVYGKGSYVSVLYNQSVLCTGDIPNFRQPSKNVTDISISLTGNSEFGSGLQEALMQNRHS 180

Query: 181 KKIPLLVEVKVPVTVVIGGLSLRKVTVLVNCSLVVDNLSPDKKVGILSTNYTYAA 234
            +IPLLV VKVPVT+VIG LSL+KV V VNCSL+VDNLSPDKKVGILS+NYTY A
Sbjct: 181 GRIPLLVVVKVPVTIVIGRLSLKKVNVFVNCSLIVDNLSPDKKVGILSSNYTYGA 234

BLAST of Sed0020773 vs. ExPASy TrEMBL
Match: A0A6J1D1Q8 (NDR1/HIN1-like protein 6 OS=Momordica charantia OX=3673 GN=LOC111016797 PE=4 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 4.3e-90
Identity = 165/228 (72.37%), Postives = 196/228 (85.96%), Query Frame = 0

Query: 7   PKYVMLSDDNHQTGLRPPPYRRNVPRYHNKPHGSSGGNCCLKCICCCYCLIILLIAALLG 66
           PKYVMLSD   Q  LRPPPYRRN+PRYH+K HG  G  CC KCICCCYC +  LI AL+G
Sbjct: 8   PKYVMLSDS--QASLRPPPYRRNIPRYHSKSHG-GGCGCCFKCICCCYCFLFFLIFALIG 67

Query: 67  TVYYVYAFYNPQVPSYKVANFKVQTFNVKPDFSLYTEFIVIVDADNPNENIDFIYGKDSS 126
             Y+++++Y+PQ+PSYKV++F V  F+VKPDFSL+TEFIVIV ADNPN NI+F+YGKDSS
Sbjct: 68  FGYFLWSYYSPQIPSYKVSDFSVHAFDVKPDFSLHTEFIVIVRADNPNNNIEFVYGKDSS 127

Query: 127 VSVVYNESELCAGTIPNFRQPSKNVTAISIMLRGKSEFGSGLQEAVMQNKHTKKIPLLVE 186
           VSV+Y++S+LCAG IPNFRQPSKNVT I+I+L G SEFGSGLQEA+MQN+H+ KIPL V+
Sbjct: 128 VSVLYSKSQLCAGKIPNFRQPSKNVTDINILLSGNSEFGSGLQEALMQNRHSGKIPLFVQ 187

Query: 187 VKVPVTVVIGGLSLRKVTVLVNCSLVVDNLSPDKKVGILSTNYTYAAT 235
           VKVPVTVV+GG S RK+TVLVNCSLVVDNLSP+KK GILSTNY+Y AT
Sbjct: 188 VKVPVTVVVGGFSFRKITVLVNCSLVVDNLSPNKKAGILSTNYSYGAT 232

BLAST of Sed0020773 vs. TAIR 10
Match: AT1G54540.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 131.3 bits (329), Expect = 9.9e-31
Identity = 67/194 (34.54%), Postives = 116/194 (59.79%), Query Frame = 0

Query: 40  SSGGNCCLKCICCCYCLIILLIAALLGTVYYVYAFYNPQVPSYKVANFKVQTFNVKPDFS 99
           S   N C K  C    L+++ + AL   V  VY  ++P++PSY+V + +V    +  D S
Sbjct: 44  SKNRNMCCKIFCWVLSLLVIALIALAIAVAVVYFVFHPKLPSYEVNSLRVTNLGINLDLS 103

Query: 100 LYTEFIVIVDADNPNENIDFIYGKDSSVSVVYNESELCAGTIPNFRQPSKNVTAISIMLR 159
           L  EF V + A NPNE I   Y K   + V Y++++LC G IP F Q  +NVT +++ L 
Sbjct: 104 LSAEFKVEITARNPNEKIGIYYEKGGHIGVWYDKTKLCEGPIPRFYQGHRNVTKLNVALT 163

Query: 160 GKSEFGSGLQEAVMQNKHTKKIPLLVEVKVPVTVVIGGLSLRKVTVLVNCSLVVDNLSPD 219
           G++++G+ +  A+ Q + T ++PL ++V  PV + +G L ++K+ +L +C LVVD+LS +
Sbjct: 164 GRAQYGNTVLAALQQQQQTGRVPLDLKVNAPVAIKLGNLKMKKIRILGSCKLVVDSLSTN 223

Query: 220 KKVGILSTNYTYAA 234
             + I +++ ++ A
Sbjct: 224 NNINIKASDCSFKA 237

BLAST of Sed0020773 vs. TAIR 10
Match: AT1G65690.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 113.2 bits (282), Expect = 2.8e-25
Identity = 63/186 (33.87%), Postives = 104/186 (55.91%), Query Frame = 0

Query: 44  NCCLKCICCCYCLIILLIAALLGTVYYVYAFYNPQVPSYKVANFKVQTFNVKPDFSLYTE 103
           +CC +C C  +C ++LL+ A+  ++  +Y  + P++P Y +   ++  F +  D SL T 
Sbjct: 60  SCCCRCFCYTFCFLLLLVVAVGASIGILYLVFKPKLPDYSIDRLQLTRFALNQDSSLTTA 119

Query: 104 FIVIVDADNPNENIDFIYGKDSSVSVVYNESELCAGTIPNFRQPSKNVTAISIMLRGKSE 163
           F V + A NPNE I   Y   S ++V Y E +L  G++P F Q  +N T I + + G+++
Sbjct: 120 FNVTITAKNPNEKIGIYYEDGSKITVWYMEHQLSNGSLPKFYQGHENTTVIYVEMTGQTQ 179

Query: 164 FGSGLQEAV-MQNKHTKKIPLLVEVKVPVTVVIGGLSLRKVTVLVNCSLVVDNLSPDKKV 223
             SGL+  +  Q + T  IPL + V  PV V  G L L +V  LV C + VD+L+ +  +
Sbjct: 180 NASGLRTTLEEQQQRTGNIPLRIRVNQPVRVKFGKLKLFEVRFLVRCGVFVDSLATNNVI 239

Query: 224 GILSTN 229
            I S++
Sbjct: 240 KIQSSS 245

BLAST of Sed0020773 vs. TAIR 10
Match: AT5G36970.1 (NDR1/HIN1-like 25 )

HSP 1 Score: 106.3 bits (264), Expect = 3.4e-23
Identity = 65/201 (32.34%), Postives = 104/201 (51.74%), Query Frame = 0

Query: 37  PHGSSGGNCCLKCICCCYCLIIL-----LIAALLGTVYYVYAFYNPQVPSYKVANFKVQT 96
           P    G   C  C C CY L++L     ++ A++G +Y V   + P+ P Y +   ++  
Sbjct: 48  PREKKGSRSCW-CRCVCYTLLVLFLLIVIVGAIVGILYLV---FRPKFPDYNIDRLQLTR 107

Query: 97  FNVKPDFSLYTEFIVIVDADNPNENIDFIYGKDSSVSVVYNESELCAGTIPNFRQPSKNV 156
           F +  D SL T F V + A NPNE I   Y   S +SV+Y ++ +  G++P F Q  +N 
Sbjct: 108 FQLNQDLSLSTAFNVTITAKNPNEKIGIYYEDGSKISVLYMQTRISNGSLPKFYQGHENT 167

Query: 157 TAISIMLRGKSEFGSGLQEAVM-QNKHTKKIPLLVEVKVPVTVVIGGLSLRKVTVLVNCS 216
           T I + + G ++  + L   +  Q + T  IPL + V  PV + +G L L KV  LV C 
Sbjct: 168 TIILVEMTGFTQNATSLMTTLQEQQRLTGSIPLRIRVTQPVRIKLGKLKLMKVRFLVRCG 227

Query: 217 LVVDNLSPDKKVGILSTNYTY 232
           + VD+L+ +  + + S+N  Y
Sbjct: 228 VSVDSLAANSVIRVRSSNCKY 244

BLAST of Sed0020773 vs. TAIR 10
Match: AT5G21130.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 81.3 bits (199), Expect = 1.2e-15
Identity = 55/203 (27.09%), Postives = 95/203 (46.80%), Query Frame = 0

Query: 23  PPPYRRNVPRYHNKPHGSSGGNCCLKCICCCYCLIILLIAALLGTVY--YVYAFYNPQVP 82
           PPP   N  RY       +  +CC +C+  CY L  LLI  +L  +   + Y  Y P  P
Sbjct: 71  PPP--ENAHRYEYLSRRKTNKSCCRRCL--CYSLSALLIIIVLAAIAFGFFYLVYQPHKP 130

Query: 83  SYKVANFKVQTFNVKPDFSLYTEFIVIVDADNPNENIDFIYGKDSSVSVVYNESELCAGT 142
            + V+   V   N+           + + + N    +  IY K +   V +N ++L  G 
Sbjct: 131 QFSVSGVSVTGINLTSSSPFSPVIRIKLRSQNVKGKLGLIYEKGNEADVFFNGTKLGNGE 190

Query: 143 IPNFRQPSKNVTAISIMLRGKS-EFGSGLQEAVMQNKHTKKIPLLVEVKVPVTVVIGGLS 202
              F+QP+ NVT I  +L+G S +  S  ++ + +++   K+P  + +K PV   +G ++
Sbjct: 191 FTAFKQPAGNVTVIVTVLKGSSVKLKSSSRKELTESQKKGKVPFGLRIKAPVKFKVGSVT 250

Query: 203 LRKVTVLVNCSLVVDNLSPDKKV 223
              +T+ V+C + VD L+    V
Sbjct: 251 TWTMTITVDCKITVDKLTASATV 269

BLAST of Sed0020773 vs. TAIR 10
Match: AT2G46300.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 72.4 bits (176), Expect = 5.4e-13
Identity = 58/216 (26.85%), Postives = 106/216 (49.07%), Query Frame = 0

Query: 21  LRPPPYRRNVPRYHNKPHGSSGGNCCLKCICC-CYCLIILLIAALLGTVYYVYAFYNPQV 80
           ++  P R+ VP   +        +CC  C CC C  L++ +   L+GT  + Y +++P++
Sbjct: 31  IQQQPMRKAVPMPTSYRPKKKRRSCCRFCCCCICITLVLFIFLLLVGTAVF-YLWFDPKL 90

Query: 81  PSYKVANFKVQTFNVKPD---FSLYTEFIVIVDADNPNENIDFIYGK---DSSVSVVYNE 140
           P++ +A+F++  F +  D    SL    +  V+  NPN  + F YG    D SV    +E
Sbjct: 91  PTFSLASFRLDGFKLADDPDGASLSATAVARVEMKNPNSKLVFYYGNTAVDLSVGSGNDE 150

Query: 141 SELCAGTIPNFRQPSKNVTAISIMLRGKSEF-GSGLQEAVMQNKHTKKIPLLVEVKVPVT 200
           + +   T+  FRQ  KN T++ +    K++    GL + +     +K + + V  K  V 
Sbjct: 151 TGMGETTMNGFRQGPKNSTSVKVETTVKNQLVERGLAKRLAAKFQSKDLVINVVAKTKVG 210

Query: 201 VVIGGLSLRKVTVLVNCSLV-VDNLSPDKKVGILST 228
           + +GG+ +  + V + C  V ++ L  D    IL+T
Sbjct: 211 LGVGGIKIGMLAVNLRCGGVSLNKLDTDSPKCILNT 245

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038888833.11.1e-9776.17NDR1/HIN1-like protein 6 [Benincasa hispida][more]
XP_008455332.12.0e-9776.47PREDICTED: NDR1/HIN1-Like protein 3-like [Cucumis melo][more]
KAE8645768.12.4e-9575.11hypothetical protein Csa_020499 [Cucumis sativus][more]
XP_011658744.11.2e-9475.00NDR1/HIN1-like protein 6 [Cucumis sativus][more]
XP_023554601.16.5e-9373.19NDR1/HIN1-like protein 6 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
Q8LD983.9e-2433.87NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=NHL6 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A1S3C0T79.5e-9876.47NDR1/HIN1-Like protein 3-like OS=Cucumis melo OX=3656 GN=LOC103495521 PE=4 SV=1[more]
A0A0A0K2B45.8e-9575.00LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G047380 PE=4 ... [more]
A0A6J1GLR63.9e-9172.34NDR1/HIN1-like protein 6 OS=Cucurbita moschata OX=3662 GN=LOC111455415 PE=4 SV=1[more]
A0A6J1I2151.5e-9071.49NDR1/HIN1-like protein 6 OS=Cucurbita maxima OX=3661 GN=LOC111468301 PE=4 SV=1[more]
A0A6J1D1Q84.3e-9072.37NDR1/HIN1-like protein 6 OS=Momordica charantia OX=3673 GN=LOC111016797 PE=4 SV=... [more]
Match NameE-valueIdentityDescription
AT1G54540.19.9e-3134.54Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
AT1G65690.12.8e-2533.87Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
AT5G36970.13.4e-2332.34NDR1/HIN1-like 25 [more]
AT5G21130.11.2e-1527.09Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
AT2G46300.15.4e-1326.85Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004864Late embryogenesis abundant protein, LEA_2 subgroupPFAMPF03168LEA_2coord: 108..210
e-value: 2.7E-7
score: 31.1
NoneNo IPR availablePANTHERPTHR31852:SF176HIN1-LIKE PROTEINcoord: 36..231
NoneNo IPR availablePANTHERPTHR31852LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILYcoord: 36..231

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0020773.1Sed0020773.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane