Sed0020698 (gene) Chayote v1

Overview


Name	Sed0020698
Type	gene
Organism	Sechium edule (Chayote v1)
Description	auxin-responsive protein SAUR24-like
Location	LG01: 1842015 .. 1842308 (-)
RNA-Seq Expression	Sed0020698
Synteny	Sed0020698

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGATTCGGTTGCTATCGTTTGTTCCTCATGCCAAGCAAATTCTAAAGATGCAGTCAAGTTTCACCAAAAACCAGTTGGATGTTCCAAAAGGCCATGTAGCCGTTTATGTGGGAGAGATCCAAAGGAAGCGGTTTGTGGTTCCGATAACTTACCTAAACCATCCATCGTTCCAGCAACTGCTCAGCCATGCCGAGGAGGAGTTTGGCTTCCATCACCCACAAGGGGGCCTAACAATTCCTTGCAAAGAGGATGCCTTCATTGATCTCACTTCTAGATTGCAAGTATCTTGA

mRNA sequence

ATGGGGATTCGGTTGCTATCGTTTGTTCCTCATGCCAAGCAAATTCTAAAGATGCAGTCAAGTTTCACCAAAAACCAGTTGGATGTTCCAAAAGGCCATGTAGCCGTTTATGTGGGAGAGATCCAAAGGAAGCGGTTTGTGGTTCCGATAACTTACCTAAACCATCCATCGTTCCAGCAACTGCTCAGCCATGCCGAGGAGGAGTTTGGCTTCCATCACCCACAAGGGGGCCTAACAATTCCTTGCAAAGAGGATGCCTTCATTGATCTCACTTCTAGATTGCAAGTATCTTGA

Coding sequence (CDS)

ATGGGGATTCGGTTGCTATCGTTTGTTCCTCATGCCAAGCAAATTCTAAAGATGCAGTCAAGTTTCACCAAAAACCAGTTGGATGTTCCAAAAGGCCATGTAGCCGTTTATGTGGGAGAGATCCAAAGGAAGCGGTTTGTGGTTCCGATAACTTACCTAAACCATCCATCGTTCCAGCAACTGCTCAGCCATGCCGAGGAGGAGTTTGGCTTCCATCACCCACAAGGGGGCCTAACAATTCCTTGCAAAGAGGATGCCTTCATTGATCTCACTTCTAGATTGCAAGTATCTTGA

Protein sequence

MGIRLLSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS

Homology

[Close]

BLAST of Sed0020698 vs. NCBI nr
Match: XP_022947574.1 (auxin-responsive protein SAUR21-like [Cucurbita moschata] >XP_023533291.1 auxin-responsive protein SAUR21-like [Cucurbita pepo subsp. pepo] >KAG6605015.1 Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia] >KAG6605021.1 Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 194.9 bits (494), Expect = 3.2e-46
Identity = 92/97 (94.85%), Postives = 96/97 (98.97%), Query Frame = 0


Query: 1  MGIRLLSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQ 60
          MGIRLLS VPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPI+YLNHPSFQ+
Sbjct: 1  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 98
          LLSHAEEEFGFHHPQGGLTIPC+EDAF+DLTSRLQVS
Sbjct: 61 LLSHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS 97

[Close]

BLAST of Sed0020698 vs. NCBI nr
Match: XP_022146170.1 (auxin-responsive protein SAUR21-like [Momordica charantia])

HSP 1 Score: 194.9 bits (494), Expect = 3.2e-46
Identity = 93/97 (95.88%), Postives = 95/97 (97.94%), Query Frame = 0


Query: 1  MGIRLLSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQ 60
          MGIRLLS VPHAKQILKMQSSFTKNQ+DVPK HVAVYVGEIQRKRFVVPI+YLNHPSFQQ
Sbjct: 1  MGIRLLSLVPHAKQILKMQSSFTKNQMDVPKSHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 98
          LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS
Sbjct: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 97

[Close]

BLAST of Sed0020698 vs. NCBI nr
Match: XP_022944365.1 (auxin-responsive protein SAUR24-like [Cucurbita moschata] >XP_022944367.1 auxin-responsive protein SAUR24-like [Cucurbita moschata] >XP_022986731.1 auxin-responsive protein SAUR24-like [Cucurbita maxima] >XP_022986733.1 auxin-responsive protein SAUR24-like [Cucurbita maxima] >XP_022986734.1 auxin-responsive protein SAUR24-like [Cucurbita maxima] >XP_022986735.1 auxin-responsive protein SAUR24-like [Cucurbita maxima] >KAG6571048.1 Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 193.4 bits (490), Expect = 9.4e-46
Identity = 92/97 (94.85%), Postives = 94/97 (96.91%), Query Frame = 0


Query: 1  MGIRLLSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQ 60
          MGIR LS VPHAKQILKMQS FTKNQLDVPKGHVAVYVGEIQRKRFVVPI+YLNHPSFQQ
Sbjct: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 98
          LLSHAEE+FGFHHPQGGLTIPCKEDAFIDLTSRLQVS
Sbjct: 61 LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 97

[Close]

BLAST of Sed0020698 vs. NCBI nr
Match: XP_022947577.1 (auxin-responsive protein SAUR21-like [Cucurbita moschata] >XP_022947578.1 auxin-responsive protein SAUR21-like [Cucurbita moschata] >KAG6605024.1 Auxin-responsive protein SAUR20, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 193.4 bits (490), Expect = 9.4e-46
Identity = 91/97 (93.81%), Postives = 95/97 (97.94%), Query Frame = 0


Query: 1  MGIRLLSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQ 60
          MGIRLLS VPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPI+YLNHPSFQ+
Sbjct: 1  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 98
          LL HAEEEFGFHHPQGGLTIPC+EDAF+DLTSRLQVS
Sbjct: 61 LLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS 97

[Close]

BLAST of Sed0020698 vs. NCBI nr
Match: XP_022944366.1 (auxin-responsive protein SAUR24-like [Cucurbita moschata] >KAG6571052.1 Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 192.2 bits (487), Expect = 2.1e-45
Identity = 91/97 (93.81%), Postives = 94/97 (96.91%), Query Frame = 0


Query: 1  MGIRLLSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQ 60
          MGIR LS VPHAKQILKMQS FTKNQLDVPKGHVAVYVGEIQRKRF+VPI+YLNHPSFQQ
Sbjct: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFMVPISYLNHPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 98
          LLSHAEE+FGFHHPQGGLTIPCKEDAFIDLTSRLQVS
Sbjct: 61 LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 97

[Close]

BLAST of Sed0020698 vs. ExPASy Swiss-Prot
Match: Q9FK62 (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 1.8e-23
Identity = 53/90 (58.89%), Postives = 65/90 (72.22%), Query Frame = 0


Query: 6  LSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHA 65
          ++FV       K+ S  T      PKG +AVYVGE Q+KR++VP++YLN PSFQ LLS +
Sbjct: 1  MAFVRSLLGAKKILSRSTGAGSAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKS 60

Query: 66 EEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ 96
          EEEFGF HP GGLTIPC ED FI++TSRLQ
Sbjct: 61 EEEFGFDHPMGGLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of Sed0020698 vs. ExPASy Swiss-Prot
Match: Q9FJG0 (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 2.3e-23
Identity = 53/90 (58.89%), Postives = 64/90 (71.11%), Query Frame = 0


Query: 6  LSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHA 65
          ++FV       K+ S  T      PKG +AVYVGE Q+KR++VPI+YLN PSFQ LLS +
Sbjct: 1  MAFVRSLLGAKKILSRSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKS 60

Query: 66 EEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ 96
          EEEFGF HP GGLTIPC ED FI++TSR Q
Sbjct: 61 EEEFGFDHPMGGLTIPCPEDTFINVTSRFQ 90

[Close]

BLAST of Sed0020698 vs. ExPASy Swiss-Prot
Match: Q9FJF7 (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 6.8e-23
Identity = 50/79 (63.29%), Postives = 61/79 (77.22%), Query Frame = 0


Query: 17 KMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQG 76
          K+ S  T      PKG +AVYVGE Q+KR++VP++YLN PSFQ LLS +E+EFGF HP G
Sbjct: 12 KILSRSTAAVSAAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDEFGFDHPMG 71

Query: 77 GLTIPCKEDAFIDLTSRLQ 96
          GLTIPC ED FI++TSRLQ
Sbjct: 72 GLTIPCHEDTFINVTSRLQ 90

[Close]

BLAST of Sed0020698 vs. ExPASy Swiss-Prot
Match: Q9FJG1 (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana OX=3702 GN=SAUR19 PE=2 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 8.9e-23
Identity = 52/90 (57.78%), Postives = 65/90 (72.22%), Query Frame = 0


Query: 6  LSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHA 65
          ++FV       K+ S  T      PKG +AVYVGE Q+KR++VP++YL+ PSFQ LLS +
Sbjct: 1  MAFVRSLLGAKKILSRSTAAGSAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKS 60

Query: 66 EEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ 96
          EEEFGF HP GGLTIPC ED FI++TSRLQ
Sbjct: 61 EEEFGFAHPMGGLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of Sed0020698 vs. ExPASy Swiss-Prot
Match: Q9FJF9 (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.2e-22
Identity = 51/84 (60.71%), Postives = 64/84 (76.19%), Query Frame = 0


Query: 12 AKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGF 71
          AK+IL   ++        PKG +AVYVGE Q+KR++VP++YL+ PSFQ LLS +EEEFGF
Sbjct: 10 AKKILSRSTASA-----APKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGF 69

Query: 72 HHPQGGLTIPCKEDAFIDLTSRLQ 96
           HP GGLTIPC ED FI++TSRLQ
Sbjct: 70 DHPMGGLTIPCPEDTFINVTSRLQ 88

[Close]

BLAST of Sed0020698 vs. ExPASy TrEMBL
Match: A0A6J1CWI9 (auxin-responsive protein SAUR21-like OS=Momordica charantia OX=3673 GN=LOC111015449 PE=3 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 1.6e-46
Identity = 93/97 (95.88%), Postives = 95/97 (97.94%), Query Frame = 0


Query: 1  MGIRLLSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQ 60
          MGIRLLS VPHAKQILKMQSSFTKNQ+DVPK HVAVYVGEIQRKRFVVPI+YLNHPSFQQ
Sbjct: 1  MGIRLLSLVPHAKQILKMQSSFTKNQMDVPKSHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 98
          LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS
Sbjct: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 97

[Close]

BLAST of Sed0020698 vs. ExPASy TrEMBL
Match: A0A6J1G772 (auxin-responsive protein SAUR21-like OS=Cucurbita moschata OX=3662 GN=LOC111451397 PE=3 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 1.6e-46
Identity = 92/97 (94.85%), Postives = 96/97 (98.97%), Query Frame = 0


Query: 1  MGIRLLSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQ 60
          MGIRLLS VPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPI+YLNHPSFQ+
Sbjct: 1  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 98
          LLSHAEEEFGFHHPQGGLTIPC+EDAF+DLTSRLQVS
Sbjct: 61 LLSHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS 97

[Close]

BLAST of Sed0020698 vs. ExPASy TrEMBL
Match: A0A6J1JHE3 (auxin-responsive protein SAUR24-like OS=Cucurbita maxima OX=3661 GN=LOC111484398 PE=3 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 4.5e-46
Identity = 92/97 (94.85%), Postives = 94/97 (96.91%), Query Frame = 0


Query: 1  MGIRLLSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQ 60
          MGIR LS VPHAKQILKMQS FTKNQLDVPKGHVAVYVGEIQRKRFVVPI+YLNHPSFQQ
Sbjct: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 98
          LLSHAEE+FGFHHPQGGLTIPCKEDAFIDLTSRLQVS
Sbjct: 61 LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 97

[Close]

BLAST of Sed0020698 vs. ExPASy TrEMBL
Match: A0A6J1G6U7 (auxin-responsive protein SAUR21-like OS=Cucurbita moschata OX=3662 GN=LOC111451400 PE=3 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 4.5e-46
Identity = 91/97 (93.81%), Postives = 95/97 (97.94%), Query Frame = 0


Query: 1  MGIRLLSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQ 60
          MGIRLLS VPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPI+YLNHPSFQ+
Sbjct: 1  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 98
          LL HAEEEFGFHHPQGGLTIPC+EDAF+DLTSRLQVS
Sbjct: 61 LLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS 97

[Close]

BLAST of Sed0020698 vs. ExPASy TrEMBL
Match: A0A6J1FVI4 (auxin-responsive protein SAUR24-like OS=Cucurbita moschata OX=3662 GN=LOC111448832 PE=3 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 4.5e-46
Identity = 92/97 (94.85%), Postives = 94/97 (96.91%), Query Frame = 0


Query: 1  MGIRLLSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQ 60
          MGIR LS VPHAKQILKMQS FTKNQLDVPKGHVAVYVGEIQRKRFVVPI+YLNHPSFQQ
Sbjct: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 98
          LLSHAEE+FGFHHPQGGLTIPCKEDAFIDLTSRLQVS
Sbjct: 61 LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 97

[Close]

BLAST of Sed0020698 vs. TAIR 10
Match: AT2G21210.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 121.3 bits (303), Expect = 4.2e-28
Identity = 59/98 (60.20%), Postives = 73/98 (74.49%), Query Frame = 0


Query: 1  MGIRLLSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGE-IQRKRFVVPITYLNHPSFQ 60
          M IR+   +  +KQ+LK   S + N + +PKGH+AVYVGE +Q++RFVVP+TYL+HP FQ
Sbjct: 1  MAIRISRVLQSSKQLLK-SLSHSSNNVAIPKGHLAVYVGEMMQKRRFVVPVTYLSHPCFQ 60

Query: 61 QLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 98
          +LL  AEEEFGF HP GGLTIPC E  FIDL SRL  S
Sbjct: 61 KLLRKAEEEFGFDHPMGGLTIPCTEQIFIDLASRLSTS 97

[Close]

BLAST of Sed0020698 vs. TAIR 10
Match: AT4G38840.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 117.9 bits (294), Expect = 4.7e-27
Identity = 58/97 (59.79%), Postives = 71/97 (73.20%), Query Frame = 0


Query: 1  MGIRLLSFVPHAKQILK----MQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHP 60
          M IR+   +  +KQIL+    + SS + + LDVPKG++AVYVGE   KRFVVP++YL+ P
Sbjct: 1  MAIRIPRVLQSSKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQP 60

Query: 61 SFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSR 94
          SFQ LL  AEEEFGF HP GGLTIPC E+ FIDL SR
Sbjct: 61 SFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDLASR 97

[Close]

BLAST of Sed0020698 vs. TAIR 10
Match: AT4G34810.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 117.9 bits (294), Expect = 4.7e-27
Identity = 60/105 (57.14%), Postives = 76/105 (72.38%), Query Frame = 0


Query: 1   MGIRLLSFVPHAKQILKMQSSFTKNQLD------VPKGHVAVYVG---EIQRKRFVVPIT 60
           MG+   +     KQILK+ S   +N+        VPKGHVAVYVG   E+++KRFVVPI+
Sbjct: 1   MGLSRFAISNATKQILKLNSLANRNRTSSSSSDHVPKGHVAVYVGEQIEMEKKRFVVPIS 60

Query: 61  YLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDL-TSRLQ 96
           +LNHPSF++ LS AEEEFGF+HP GGLTIPC+E+ F+DL  SRLQ
Sbjct: 61  FLNHPSFKEFLSRAEEEFGFNHPMGGLTIPCREEVFLDLIASRLQ 105

[Close]

BLAST of Sed0020698 vs. TAIR 10
Match: AT4G34790.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 110.5 bits (275), Expect = 7.5e-25
Identity = 58/108 (53.70%), Postives = 75/108 (69.44%), Query Frame = 0


Query: 1   MGIRLLSFVPHAKQILKMQSSFTKNQLD-----------VPKGHVAVYVGE-IQRKRFVV 60
           MG+ + S +P+AKQI K QS   KN              VPKGHVAVYVGE +++KRFVV
Sbjct: 1   MGL-MRSMLPNAKQIFKSQSMRNKNGSSSPSTTTTTSGLVPKGHVAVYVGEQMEKKRFVV 60

Query: 61  PITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQV 97
           PI+YLNHP F++ L+ AEEE GFHH  GGLTIPC+E++F+ L +  Q+
Sbjct: 61  PISYLNHPLFREFLNRAEEECGFHHSMGGLTIPCREESFLYLITSHQL 107

[Close]

BLAST of Sed0020698 vs. TAIR 10
Match: AT5G18080.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 109.8 bits (273), Expect = 1.3e-24
Identity = 53/90 (58.89%), Postives = 65/90 (72.22%), Query Frame = 0


Query: 6  LSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHA 65
          ++FV       K+ S  T      PKG +AVYVGE Q+KR++VP++YLN PSFQ LLS +
Sbjct: 1  MAFVRSLLGAKKILSRSTGAGSAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKS 60

Query: 66 EEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ 96
          EEEFGF HP GGLTIPC ED FI++TSRLQ
Sbjct: 61 EEEFGFDHPMGGLTIPCPEDTFINVTSRLQ 90

The following BLAST results are available for this feature:

BLAST of Sed0020698 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022947574.1	3.2e-46	94.85	auxin-responsive protein SAUR21-like [Cucurbita moschata] >XP_023533291.1 auxin-...	[more]
XP_022146170.1	3.2e-46	95.88	auxin-responsive protein SAUR21-like [Momordica charantia]	[more]
XP_022944365.1	9.4e-46	94.85	auxin-responsive protein SAUR24-like [Cucurbita moschata] >XP_022944367.1 auxin-...	[more]
XP_022947577.1	9.4e-46	93.81	auxin-responsive protein SAUR21-like [Cucurbita moschata] >XP_022947578.1 auxin-...	[more]
XP_022944366.1	2.1e-45	93.81	auxin-responsive protein SAUR24-like [Cucurbita moschata] >KAG6571052.1 Auxin-re...	[more]

BLAST of Sed0020698 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FK62	1.8e-23	58.89	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 S...	[more]
Q9FJG0	2.3e-23	58.89	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 S...	[more]
Q9FJF7	6.8e-23	63.29	Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 S...	[more]
Q9FJG1	8.9e-23	57.78	Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana OX=3702 GN=SAUR19 PE=2 S...	[more]
Q9FJF9	1.2e-22	60.71	Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 S...	[more]

BLAST of Sed0020698 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CWI9	1.6e-46	95.88	auxin-responsive protein SAUR21-like OS=Momordica charantia OX=3673 GN=LOC111015...	[more]
A0A6J1G772	1.6e-46	94.85	auxin-responsive protein SAUR21-like OS=Cucurbita moschata OX=3662 GN=LOC1114513...	[more]
A0A6J1JHE3	4.5e-46	94.85	auxin-responsive protein SAUR24-like OS=Cucurbita maxima OX=3661 GN=LOC111484398...	[more]
A0A6J1G6U7	4.5e-46	93.81	auxin-responsive protein SAUR21-like OS=Cucurbita moschata OX=3662 GN=LOC1114514...	[more]
A0A6J1FVI4	4.5e-46	94.85	auxin-responsive protein SAUR24-like OS=Cucurbita moschata OX=3662 GN=LOC1114488...	[more]

BLAST of Sed0020698 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G21210.1	4.2e-28	60.20	SAUR-like auxin-responsive protein family	[more]
AT4G38840.1	4.7e-27	59.79	SAUR-like auxin-responsive protein family	[more]
AT4G34810.1	4.7e-27	57.14	SAUR-like auxin-responsive protein family	[more]
AT4G34790.1	7.5e-25	53.70	SAUR-like auxin-responsive protein family	[more]
AT5G18080.1	1.3e-24	58.89	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 13..93 e-value: 4.2E-27 score: 94.2
None	No IPR available	PANTHER	PTHR31929	SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED	coord: 1..95
None	No IPR available	PANTHER	PTHR31929:SF121	AUXIN-RESPONSIVE PROTEIN SAUR21-LIKE	coord: 1..95

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0020698.1	Sed0020698.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin