Sed0020657 (gene) Chayote v1

Overview


Name	Sed0020657
Type	gene
Organism	Sechium edule (Chayote v1)
Description	transcription factor bHLH131-like
Location	LG10: 5991338 .. 5992853 (+)
RNA-Seq Expression	Sed0020657
Synteny	Sed0020657

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAACAAATGTATCCTCCAACAATGAAGCATTACAGCCCACTCTCAAGGAAGGAGCCTAAATTGCATGCAGCTCACAAGCATCGCCTCGCAGAGCAGAACCGAAGAAACAGAATCAGCGGCCAATATGCCACCCTCCGTGCCATCCTCCCCACCCTAATATCCAAAGTTAGTCCAAACTTCCTTTCGTAAGTCTATCTGTGTTAGACACTAATACTTCTGGGCAGGTATCAACACTCGAAATTACTTGTCTTCCTTTATTATTATTATTTTTAATTTCAAACTCTTCGTCATGGGCACACCATTTAAGAATTTTTTTTTTCGAGTAGTCCATGACATAACAACAAGGTAGTGTTGGTGGAGGCGGCCGACAACTACGTCCATGGATGGACAAAAATGAAAAGGGAAAGAAAAAAAAAAGGAAAAGAGGCAAAAACTAAGGCCCCGTTTGATAAACCATTAATTTTGTTTTTTGTTTATGAAATTTAAGCCTATTTCTATTCAAATTTCCTACCATGTGCTTCATCTTTCCTACCATATATCCGTCTTTCCTTAAGAAAGTAGGAGAATACTAACCAAATTTCAAAAAAATAAACAAGTTTTTGGAAACTACTTTTTTTTTTTTTACAAATTTTGATTTTGTTTATTAAAATATAGGTAAGATGTAGATATCCAAATAAGGAAAACCGTATAATAAGGTAGTTGTTGTAGGCTTAAATTTCATAAACAAAAAACAAAAAACAAAATGGTTATTAAACGGGGACCTAAAATATTTGAAATTGTTAAGAGTTAGGCTAATAATTTTGTTTCGTGGGATTTTAGTAGGCTTTTAAAGAATTGTGTGCTTACTAGTGAATTTTCATGTTCCTCCTTAATTTAATTATTTTTCATAGTTGCTATAAAAACTAATTCGATCTTTTTAATAGTAAATAATAATAATAATAATAAACCTCCCTGACCTATTCATGTCCTATATTTTCGAATAATTGTATGTTTCCGTATCTATGTCGTGTTCGTGTTTGTGCTTCTGAGAAATCTATGGTCAATTCAACTCGAAAAGAAATGATTATGAACACAGACAGAGAAGAGCAAGTTCAAAAAGGCATTTGTGCTTTCGGAGACAATCCGAAGAGTGAAGGAGCTTAAGAAGGTTGCGTCAGAAAAGAGAGCAGCCATGGTTCCTAGTGGGGCGGACAGGTTGAGCTTAGAGCAATGCAACGGCAACGGCGTCGAAGGGACGGTGAAGGCGGTAATGAGCTGCGAGGACAGGCAAGAGATCATGGCAGAGTTAGGAAAAGCACTGAAAGCAGTGAAGATGAAGGTGGTGAGAGCTGAGATGGTGACTGTGGGTGGAAGGAACAAATTTGCTTTGTGGTTGGAGGGCCCTAAACAAGGACCTGTTGCTGCTCTTAAGAGAGCTTTGGAGGCTGTTATGAAAAGGCCTTCATGGATTGCTAGAAAACCCAAAAGTGATTGGCTTAACCCTCTCCCAATAGCTAACAAGTATGGCTCTTAG

mRNA sequence

ATGCAACAAATGTATCCTCCAACAATGAAGCATTACAGCCCACTCTCAAGGAAGGAGCCTAAATTGCATGCAGCTCACAAGCATCGCCTCGCAGAGCAGAACCGAAGAAACAGAATCAGCGGCCAATATGCCACCCTCCGTGCCATCCTCCCCACCCTAATATCCAAAACAGAGAAGAGCAAGTTCAAAAAGGCATTTGTGCTTTCGGAGACAATCCGAAGAGTGAAGGAGCTTAAGAAGGTTGCGTCAGAAAAGAGAGCAGCCATGGTTCCTAGTGGGGCGGACAGGTTGAGCTTAGAGCAATGCAACGGCAACGGCGTCGAAGGGACGGTGAAGGCGGTAATGAGCTGCGAGGACAGGCAAGAGATCATGGCAGAGTTAGGAAAAGCACTGAAAGCAGTGAAGATGAAGGTGGTGAGAGCTGAGATGGTGACTGTGGGTGGAAGGAACAAATTTGCTTTGTGGTTGGAGGGCCCTAAACAAGGACCTGTTGCTGCTCTTAAGAGAGCTTTGGAGGCTGTTATGAAAAGGCCTTCATGGATTGCTAGAAAACCCAAAAGTGATTGGCTTAACCCTCTCCCAATAGCTAACAAGTATGGCTCTTAG

Coding sequence (CDS)

ATGCAACAAATGTATCCTCCAACAATGAAGCATTACAGCCCACTCTCAAGGAAGGAGCCTAAATTGCATGCAGCTCACAAGCATCGCCTCGCAGAGCAGAACCGAAGAAACAGAATCAGCGGCCAATATGCCACCCTCCGTGCCATCCTCCCCACCCTAATATCCAAAACAGAGAAGAGCAAGTTCAAAAAGGCATTTGTGCTTTCGGAGACAATCCGAAGAGTGAAGGAGCTTAAGAAGGTTGCGTCAGAAAAGAGAGCAGCCATGGTTCCTAGTGGGGCGGACAGGTTGAGCTTAGAGCAATGCAACGGCAACGGCGTCGAAGGGACGGTGAAGGCGGTAATGAGCTGCGAGGACAGGCAAGAGATCATGGCAGAGTTAGGAAAAGCACTGAAAGCAGTGAAGATGAAGGTGGTGAGAGCTGAGATGGTGACTGTGGGTGGAAGGAACAAATTTGCTTTGTGGTTGGAGGGCCCTAAACAAGGACCTGTTGCTGCTCTTAAGAGAGCTTTGGAGGCTGTTATGAAAAGGCCTTCATGGATTGCTAGAAAACCCAAAAGTGATTGGCTTAACCCTCTCCCAATAGCTAACAAGTATGGCTCTTAG

Protein sequence

MQQMYPPTMKHYSPLSRKEPKLHAAHKHRLAEQNRRNRISGQYATLRAILPTLISKTEKSKFKKAFVLSETIRRVKELKKVASEKRAAMVPSGADRLSLEQCNGNGVEGTVKAVMSCEDRQEIMAELGKALKAVKMKVVRAEMVTVGGRNKFALWLEGPKQGPVAALKRALEAVMKRPSWIARKPKSDWLNPLPIANKYGS

Homology

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BLAST of Sed0020657 vs. NCBI nr
Match: XP_023518416.1 (transcription factor bHLH131-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 279.6 bits (714), Expect = 2.1e-71
Identity = 154/209 (73.68%), Postives = 176/209 (84.21%), Query Frame = 0


Query: 3   QMYPPTMKHYSPLS---RKEPKLHAAHKHRLAEQNRRNRISGQYATLRAILPTLISKTEK 62
           Q  PPT+K+YSP+S   RKEPKL+AA KHRLAEQNRRNRISGQYATLRAILP+L SKT+K
Sbjct: 55  QWQPPTIKNYSPISSLPRKEPKLYAAQKHRLAEQNRRNRISGQYATLRAILPSL-SKTDK 114

Query: 63  SKFKKAFVLSETIRRVKELKKVASEKRAAM-------VPSGADRLSLEQCNGNGVEGTVK 122
            K KKAFVL+ETIRRVKELKK+ SEK AA        +PSGA+RLSLE C  +GVEG VK
Sbjct: 115 RKHKKAFVLAETIRRVKELKKLVSEKTAANRGVKECGIPSGANRLSLENC--DGVEGMVK 174

Query: 123 AVMSCEDRQEIMAELGKALKAVKMKVVRAEMVTVGGRNKFALWLEGPKQGPVA-ALKRAL 182
           AVMSCEDRQ+IMAELGKALK VKMKVVRAEMVTVGGRNKF LW++GPK+GP A  +KRAL
Sbjct: 175 AVMSCEDRQDIMAELGKALKTVKMKVVRAEMVTVGGRNKFVLWMQGPKEGPAAGGVKRAL 234

Query: 183 EAVMKRPSWIARKPKSDWLNPLPIANKYG 201
           +AVM++PSWIARKP++DW   LP  N+YG
Sbjct: 235 DAVMRKPSWIARKPRTDWHTRLPTPNRYG 260

[Close]

BLAST of Sed0020657 vs. NCBI nr
Match: XP_022962807.1 (transcription factor bHLH131-like [Cucurbita moschata])

HSP 1 Score: 278.1 bits (710), Expect = 6.0e-71
Identity = 153/209 (73.21%), Postives = 176/209 (84.21%), Query Frame = 0


Query: 3   QMYPPTMKHYSPLS---RKEPKLHAAHKHRLAEQNRRNRISGQYATLRAILPTLISKTEK 62
           Q  PPT+K+YSP+S   RKEPKL+AA KHRLAEQNRRNRISGQYATLRAILP+L SKT+K
Sbjct: 55  QWLPPTIKNYSPISSLPRKEPKLYAAQKHRLAEQNRRNRISGQYATLRAILPSL-SKTDK 114

Query: 63  SKFKKAFVLSETIRRVKELKKVASEKRAAM-------VPSGADRLSLEQCNGNGVEGTVK 122
            K KKAFVL+ETIRRVKELKK+ SEK AA        +PSGA+RLSLE C  +GVEG VK
Sbjct: 115 RKHKKAFVLAETIRRVKELKKLVSEKTAANRGVKECGIPSGANRLSLENC--DGVEGMVK 174

Query: 123 AVMSCEDRQEIMAELGKALKAVKMKVVRAEMVTVGGRNKFALWLEGPKQGPVA-ALKRAL 182
           AVMSCEDRQ+IMAELGKALK VKMKVVRAEMV+VGGRNKF LW++GPK+GP A  +KRAL
Sbjct: 175 AVMSCEDRQDIMAELGKALKTVKMKVVRAEMVSVGGRNKFVLWMQGPKEGPAAGGVKRAL 234

Query: 183 EAVMKRPSWIARKPKSDWLNPLPIANKYG 201
           +AVM++PSWIARKP++DW   LP  N+YG
Sbjct: 235 DAVMRKPSWIARKPRTDWHTRLPTPNRYG 260

[Close]

BLAST of Sed0020657 vs. NCBI nr
Match: KAG6594901.1 (Transcription factor basic helix-loop-helix 131, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 277.7 bits (709), Expect = 7.8e-71
Identity = 153/209 (73.21%), Postives = 175/209 (83.73%), Query Frame = 0


Query: 3   QMYPPTMKHYSPLS---RKEPKLHAAHKHRLAEQNRRNRISGQYATLRAILPTLISKTEK 62
           Q  PPT+K+YSP+S   RKEPKL+AA KHRLAEQNRRNRISGQYATLRAILP+L SKT+K
Sbjct: 133 QWLPPTIKNYSPISSLPRKEPKLYAALKHRLAEQNRRNRISGQYATLRAILPSL-SKTDK 192

Query: 63  SKFKKAFVLSETIRRVKELKKVASEKRAAM-------VPSGADRLSLEQCNGNGVEGTVK 122
            K KKAFVL+ETIRRVKELKK+ SEK AA        +PSGA+RLSLE C   GVEG VK
Sbjct: 193 RKHKKAFVLAETIRRVKELKKLVSEKTAANRGVKECGIPSGANRLSLENC--GGVEGMVK 252

Query: 123 AVMSCEDRQEIMAELGKALKAVKMKVVRAEMVTVGGRNKFALWLEGPKQGPVA-ALKRAL 182
           AVMSCEDRQ+IMAELGKALK VKMKVVRAEMVTVGGRNKF LW++GPK+GP A  +KRAL
Sbjct: 253 AVMSCEDRQDIMAELGKALKTVKMKVVRAEMVTVGGRNKFVLWMQGPKEGPAAGGVKRAL 312

Query: 183 EAVMKRPSWIARKPKSDWLNPLPIANKYG 201
           +AVM++PSW+ARKP++DW   LP  N+YG
Sbjct: 313 DAVMRKPSWVARKPRTDWHTRLPTPNRYG 338

[Close]

BLAST of Sed0020657 vs. NCBI nr
Match: KAG7026866.1 (Transcription factor bHLH, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 277.3 bits (708), Expect = 1.0e-70
Identity = 153/209 (73.21%), Postives = 174/209 (83.25%), Query Frame = 0


Query: 3   QMYPPTMKHYSPLS---RKEPKLHAAHKHRLAEQNRRNRISGQYATLRAILPTLISKTEK 62
           Q  PPT+K+YSP+S   RKEPKL+AA KHRLAEQNRRNRISGQY TLRAILP+L SKT+K
Sbjct: 33  QWLPPTIKNYSPISSLPRKEPKLYAALKHRLAEQNRRNRISGQYVTLRAILPSL-SKTDK 92

Query: 63  SKFKKAFVLSETIRRVKELKKVASEKRAAM-------VPSGADRLSLEQCNGNGVEGTVK 122
            K KKAFVL+ETIRRVKELKK+ SEK AA        +PSGA+RLSLE C   GVEG VK
Sbjct: 93  RKHKKAFVLAETIRRVKELKKLVSEKTAANRGVKECGIPSGANRLSLENC--GGVEGMVK 152

Query: 123 AVMSCEDRQEIMAELGKALKAVKMKVVRAEMVTVGGRNKFALWLEGPKQGPVA-ALKRAL 182
           AVMSCEDRQ+IMAELGKALK VKMKVVRAEMVTVGGRNKF LW++GPK+GP A  LKRAL
Sbjct: 153 AVMSCEDRQDIMAELGKALKTVKMKVVRAEMVTVGGRNKFVLWMQGPKEGPAAGGLKRAL 212

Query: 183 EAVMKRPSWIARKPKSDWLNPLPIANKYG 201
           +AVM++PSW+ARKP++DW   LP  N+YG
Sbjct: 213 DAVMRKPSWVARKPRTDWHTRLPTPNRYG 238

[Close]

BLAST of Sed0020657 vs. NCBI nr
Match: XP_023004035.1 (transcription factor bHLH131-like [Cucurbita maxima])

HSP 1 Score: 276.6 bits (706), Expect = 1.7e-70
Identity = 153/209 (73.21%), Postives = 175/209 (83.73%), Query Frame = 0


Query: 3   QMYPPTMKHYSPLS---RKEPKLHAAHKHRLAEQNRRNRISGQYATLRAILPTLISKTEK 62
           Q  PPT+K+YSP+S   RKEPKL+AA KHRLAEQNRRNRISGQYATLRAILP+L SKT+K
Sbjct: 55  QWQPPTIKNYSPISSLPRKEPKLYAAQKHRLAEQNRRNRISGQYATLRAILPSL-SKTDK 114

Query: 63  SKFKKAFVLSETIRRVKELKKVASEKRAAM-------VPSGADRLSLEQCNGNGVEGTVK 122
            K KKAFVL+ETIRRVKELKK+ SEK AA        +PSGA+RLSLE C  +GVEG VK
Sbjct: 115 RKHKKAFVLAETIRRVKELKKLVSEKTAANRGVKECGIPSGANRLSLENC--DGVEGMVK 174

Query: 123 AVMSCEDRQEIMAELGKALKAVKMKVVRAEMVTVGGRNKFALWLEGPKQGPVA-ALKRAL 182
           AVMSCEDRQ+IMAELGKALK VKMKVVRAEMVTVGGRNKF LW++GPK+GP A  +KRAL
Sbjct: 175 AVMSCEDRQDIMAELGKALKTVKMKVVRAEMVTVGGRNKFVLWMQGPKEGPAAGGVKRAL 234

Query: 183 EAVMKRPSWIARKPKSDWLNPLPIANKYG 201
           +AVM++ SWIARKP++DW   LP  N+YG
Sbjct: 235 DAVMRKSSWIARKPRTDWHTRLPTPNRYG 260

[Close]

BLAST of Sed0020657 vs. ExPASy Swiss-Prot
Match: P0CB25 (Transcription factor bHLH131 OS=Arabidopsis thaliana OX=3702 GN=BHLH131 PE=2 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.1e-22
Identity = 73/167 (43.71%), Postives = 100/167 (59.88%), Query Frame = 0


Query: 14  PLSRKEPKLHAAHKHRLAEQNRRNRISGQYATLRAILPTLISKTEKSKFKKAFVLSETIR 73
           P S+ E K  AA KH  AE+ RR RI+ Q+ATLR ILP L+      K  KA VL ET+R
Sbjct: 82  PKSKTESKEVAAKKHSDAERRRRLRINSQFATLRTILPNLV------KQDKASVLGETVR 141

Query: 74  RVKELKKVASEKRAAMVPSGADRLSLEQCNGNGVEGTVKAVMSCEDRQEIMAELGKALKA 133
              ELKK+  +      PS  D L L+ CN N      + V SC DR+ +M+E+ +++KA
Sbjct: 142 YFNELKKMVQD--IPTTPSLEDNLRLDHCNNN--RDLARVVFSCSDREGLMSEVAESMKA 201

Query: 134 VKMKVVRAEMVTVGGRNKFALWLEGPKQGP-VAALKRALEAVMKRPS 180
           VK K VRAE++TVGGR K AL+++G      +  LK++L+ V+   S
Sbjct: 202 VKAKAVRAEIMTVGGRTKCALFVQGVNGNEGLVKLKKSLKLVVNGKS 238

[Close]

BLAST of Sed0020657 vs. ExPASy Swiss-Prot
Match: Q9S7Y1 (Transcription factor bHLH30 OS=Arabidopsis thaliana OX=3702 GN=BHLH30 PE=1 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 3.7e-15
Identity = 60/169 (35.50%), Postives = 98/169 (57.99%), Query Frame = 0


Query: 22  LHAAHKHRLAEQNRRNRISGQYATLRAILPTLISKTEKSKFKKAFVLSETIRRVKELKKV 81
           L A+  H  AE+ RR RI+   A LR+ILP        +K  KA +L+E I+ VKELK+ 
Sbjct: 172 LAASKSHSEAERRRRERINNHLAKLRSILP------NTTKTDKASLLAEVIQHVKELKRE 231

Query: 82  ASE-KRAAMVPSGADRLSL----EQCNGNGVEGTVKAVMSCEDRQEIMAELGKALKAVKM 141
            S      +VP+ +D L++    E+  G+G    +KA + CEDR +++ ++ K LKA+++
Sbjct: 232 TSVISETNLVPTESDELTVAFTEEEETGDG-RFVIKASLCCEDRSDLLPDMIKTLKAMRL 291

Query: 142 KVVRAEMVTVGGRNKFALWLEGPKQGP--------VAALKRALEAVMKR 178
           K ++AE+ TVGGR K  L++ G +           +  ++ AL+AVM++
Sbjct: 292 KTLKAEITTVGGRVKNVLFVTGEESSGEEVEEEYCIGTIEEALKAVMEK 333

[Close]

BLAST of Sed0020657 vs. ExPASy Swiss-Prot
Match: O80674 (Transcription factor bHLH106 OS=Arabidopsis thaliana OX=3702 GN=BHLH106 PE=2 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 5.9e-13
Identity = 58/184 (31.52%), Postives = 98/184 (53.26%), Query Frame = 0


Query: 5   YPPTMKHYSPLSRKEPKLHAAHKHRLAEQNRRNRISGQYATLRAILPTLISKTEKSKFKK 64
           YP  +        ++  L A   H+ AE+ RR RI+     LR +L         SK  K
Sbjct: 48  YPLAISGIGETMAQDRALAALRNHKEAERRRRERINSHLNKLRNVLSC------NSKTDK 107

Query: 65  AFVLSETIRRVKELKK---VASEKRAAMVPSGADRLSLEQCNGNGVEGTV--KAVMSCED 124
           A +L++ ++RV+ELK+     S+    ++PS  D +S+        +G +  KA + CED
Sbjct: 108 ATLLAKVVQRVRELKQQTLETSDSDQTLLPSETDEISVLHFGDYSNDGHIIFKASLCCED 167

Query: 125 RQEIMAELGKALKAVKMKVVRAEMVTVGGRNKFALWLEGPKQ----GPVAALKRALEAVM 180
           R +++ +L + LK++ MK +RAEMVT+GGR +  L +   K+      V  L+ AL++++
Sbjct: 168 RSDLLPDLMEILKSLNMKTLRAEMVTIGGRTRSVLVVAADKEMHGVESVHFLQNALKSLL 225

[Close]

BLAST of Sed0020657 vs. ExPASy Swiss-Prot
Match: Q9LS08 (Transcription factor AIG1 OS=Arabidopsis thaliana OX=3702 GN=BHLH32 PE=1 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 2.5e-11
Identity = 51/138 (36.96%), Postives = 83/138 (60.14%), Query Frame = 0


Query: 22  LHAAHKHRLAEQNRRNRISGQYATLRAILPTLISKTEKSKFKKAFVLSETIRRVKELKKV 81
           L A+  H  AE+ RR RI+   A LR+ILP        +K  KA +L+E I+ +KELK+ 
Sbjct: 130 LAASKSHSEAERRRRERINTHLAKLRSILP------NTTKTDKASLLAEVIQHMKELKRQ 189

Query: 82  ASE-KRAAMVPSGADRLSLEQCNGNGVEG--TVKAVMSCEDRQEIMAELGKALKAVKMKV 141
            S+      VP+  D L+++  + N  EG   ++A   C+DR ++M ++  ALK+++++ 
Sbjct: 190 TSQITDTYQVPTECDDLTVDS-SYNDEEGNLVIRASFCCQDRTDLMHDVINALKSLRLRT 249

Query: 142 VRAEMVTVGGRNKFALWL 157
           ++AE+ TVGGR K  L+L
Sbjct: 250 LKAEIATVGGRVKNILFL 260

[Close]

BLAST of Sed0020657 vs. ExPASy Swiss-Prot
Match: Q9LET0 (Putative transcription factor bHLH107 OS=Arabidopsis thaliana OX=3702 GN=BHLH107 PE=3 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 5.6e-11
Identity = 56/170 (32.94%), Postives = 95/170 (55.88%), Query Frame = 0


Query: 18  KEPKLHAAHKHRLAEQNRRNRISGQYATLRAILPTLISKTEKSKFKKAFVLSETIRRVKE 77
           ++  L +   H+ AE+ RR RI+     LR +L +  SKT+KS      +L++ ++RVKE
Sbjct: 39  EDKALASLRNHKEAERKRRARINSHLNKLRKLL-SCNSKTDKST-----LLAKVVQRVKE 98

Query: 78  LKKVASEKRAAMVPSGADRLS---LEQCN-GNGVEGTVKAVMSCEDRQEIMAELGKALKA 137
           LK+   E     +PS  D +S   +E C+ G+      K    CEDR E++ +L + LK+
Sbjct: 99  LKQQTLEITDETIPSETDEISVLNIEDCSRGDDRRIIFKVSFCCEDRPELLKDLMETLKS 158

Query: 138 VKMKVVRAEMVTVGGRNKFALWLEGPKQ----GPVAALKRALEAVMKRPS 180
           ++M+ + A+M TVGGR +  L +   K+      V  L+ AL+++++R S
Sbjct: 159 LQMETLFADMTTVGGRTRNVLVVAADKEHHGVQSVNFLQNALKSLLERSS 202

[Close]

BLAST of Sed0020657 vs. ExPASy TrEMBL
Match: A0A6J1HDK5 (transcription factor bHLH131-like OS=Cucurbita moschata OX=3662 GN=LOC111463190 PE=4 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 2.9e-71
Identity = 153/209 (73.21%), Postives = 176/209 (84.21%), Query Frame = 0


Query: 3   QMYPPTMKHYSPLS---RKEPKLHAAHKHRLAEQNRRNRISGQYATLRAILPTLISKTEK 62
           Q  PPT+K+YSP+S   RKEPKL+AA KHRLAEQNRRNRISGQYATLRAILP+L SKT+K
Sbjct: 55  QWLPPTIKNYSPISSLPRKEPKLYAAQKHRLAEQNRRNRISGQYATLRAILPSL-SKTDK 114

Query: 63  SKFKKAFVLSETIRRVKELKKVASEKRAAM-------VPSGADRLSLEQCNGNGVEGTVK 122
            K KKAFVL+ETIRRVKELKK+ SEK AA        +PSGA+RLSLE C  +GVEG VK
Sbjct: 115 RKHKKAFVLAETIRRVKELKKLVSEKTAANRGVKECGIPSGANRLSLENC--DGVEGMVK 174

Query: 123 AVMSCEDRQEIMAELGKALKAVKMKVVRAEMVTVGGRNKFALWLEGPKQGPVA-ALKRAL 182
           AVMSCEDRQ+IMAELGKALK VKMKVVRAEMV+VGGRNKF LW++GPK+GP A  +KRAL
Sbjct: 175 AVMSCEDRQDIMAELGKALKTVKMKVVRAEMVSVGGRNKFVLWMQGPKEGPAAGGVKRAL 234

Query: 183 EAVMKRPSWIARKPKSDWLNPLPIANKYG 201
           +AVM++PSWIARKP++DW   LP  N+YG
Sbjct: 235 DAVMRKPSWIARKPRTDWHTRLPTPNRYG 260

[Close]

BLAST of Sed0020657 vs. ExPASy TrEMBL
Match: A0A6J1KTG6 (transcription factor bHLH131-like OS=Cucurbita maxima OX=3661 GN=LOC111497466 PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 8.5e-71
Identity = 153/209 (73.21%), Postives = 175/209 (83.73%), Query Frame = 0


Query: 3   QMYPPTMKHYSPLS---RKEPKLHAAHKHRLAEQNRRNRISGQYATLRAILPTLISKTEK 62
           Q  PPT+K+YSP+S   RKEPKL+AA KHRLAEQNRRNRISGQYATLRAILP+L SKT+K
Sbjct: 55  QWQPPTIKNYSPISSLPRKEPKLYAAQKHRLAEQNRRNRISGQYATLRAILPSL-SKTDK 114

Query: 63  SKFKKAFVLSETIRRVKELKKVASEKRAAM-------VPSGADRLSLEQCNGNGVEGTVK 122
            K KKAFVL+ETIRRVKELKK+ SEK AA        +PSGA+RLSLE C  +GVEG VK
Sbjct: 115 RKHKKAFVLAETIRRVKELKKLVSEKTAANRGVKECGIPSGANRLSLENC--DGVEGMVK 174

Query: 123 AVMSCEDRQEIMAELGKALKAVKMKVVRAEMVTVGGRNKFALWLEGPKQGPVA-ALKRAL 182
           AVMSCEDRQ+IMAELGKALK VKMKVVRAEMVTVGGRNKF LW++GPK+GP A  +KRAL
Sbjct: 175 AVMSCEDRQDIMAELGKALKTVKMKVVRAEMVTVGGRNKFVLWMQGPKEGPAAGGVKRAL 234

Query: 183 EAVMKRPSWIARKPKSDWLNPLPIANKYG 201
           +AVM++ SWIARKP++DW   LP  N+YG
Sbjct: 235 DAVMRKSSWIARKPRTDWHTRLPTPNRYG 260

[Close]

BLAST of Sed0020657 vs. ExPASy TrEMBL
Match: A0A6J1BVR4 (transcription factor bHLH131 OS=Momordica charantia OX=3673 GN=LOC111005800 PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 7.9e-69
Identity = 152/208 (73.08%), Postives = 171/208 (82.21%), Query Frame = 0


Query: 1   MQQMY----PPTMKHYSPLS---RKEPKLHAAHKHRLAEQNRRNRISGQYATLRAILPTL 60
           MQQ+Y    PP  KHYSP S   RKEPKLHAA KHRLAEQNRRNRISGQYATLRAILP+L
Sbjct: 23  MQQIYPLGQPPPAKHYSPFSSLPRKEPKLHAAQKHRLAEQNRRNRISGQYATLRAILPSL 82

Query: 61  ISKTEKSKFKKAFVLSETIRRVKELKKVASEKRAAM-------VPSGADRLSLEQCNGNG 120
             KT+KSK KKAFVL+ETIRRVKELKK+ SEKRAA        +PSGADRLSLEQC+G  
Sbjct: 83  -PKTDKSKLKKAFVLAETIRRVKELKKLVSEKRAANREARGCGLPSGADRLSLEQCDGG- 142

Query: 121 VEGTVKAVMSCEDRQEIMAELGKALKAVKMKVVRAEMVTVGGRNKFALWLEGPKQGPVAA 180
            EG VKAV+SCEDRQ+IMAEL +ALK VK+K+VRAEMVTVGGR +FALW++GPK+GP   
Sbjct: 143 -EGMVKAVLSCEDRQDIMAELSRALKTVKVKLVRAEMVTVGGRCRFALWVQGPKEGP-GV 202

Query: 181 LKRALEAVMKRPSWIARKPKSDWLNPLP 195
           LKR LEAVM+RPSWIARKP++DW  P P
Sbjct: 203 LKRVLEAVMRRPSWIARKPRNDWRTPAP 226

[Close]

BLAST of Sed0020657 vs. ExPASy TrEMBL
Match: A0A5D3CNR8 (Transcription factor bHLH131-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G003220 PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 3.8e-63
Identity = 147/214 (68.69%), Postives = 169/214 (78.97%), Query Frame = 0


Query: 1   MQQMYP----PTMKHYS-PLS---RKEPKLHAAHKHRLAEQNRRNRISGQYATLRAILPT 60
           M Q+YP    P +  YS P+S   RKEPKL+AA KHRLAEQNRRNRISGQYATLRAILP+
Sbjct: 13  MHQIYPQAQAPMINPYSCPISSFPRKEPKLNAAVKHRLAEQNRRNRISGQYATLRAILPS 72

Query: 61  LISKTEKSKFKKAFVLSETIRRVKELKKVASEKRAAM-------VPSGADRLSLEQCNGN 120
           L SKT+KSK KKAFVLSETIR VKELKK+ SEKR A        +PSGADRL+LEQCNG 
Sbjct: 73  L-SKTDKSKLKKAFVLSETIRGVKELKKLVSEKRVANREFRDCGIPSGADRLTLEQCNGG 132

Query: 121 GVEGTVKAVMSCEDRQEIMAELGKALKAVKMKVVRAEMVTVGGRNKFALWLEGPKQGPVA 180
             EG VKAVMSCEDRQ+IMAEL KALK +K+K+VRAEMVTVGGRNKF+LW++GPK+G   
Sbjct: 133 --EGMVKAVMSCEDRQDIMAELAKALKTMKVKLVRAEMVTVGGRNKFSLWIQGPKEGH-G 192

Query: 181 ALKRALEAVMKRPSWIARKPKSDWLNPLPIANKY 200
            +KR LEAVMKRPSWIARKP++ W +     N +
Sbjct: 193 GIKRVLEAVMKRPSWIARKPRNVWQSRASTDNNF 222

[Close]

BLAST of Sed0020657 vs. ExPASy TrEMBL
Match: A0A1S3B0Y8 (transcription factor bHLH131-like OS=Cucumis melo OX=3656 GN=LOC103484938 PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 3.8e-63
Identity = 147/214 (68.69%), Postives = 169/214 (78.97%), Query Frame = 0


Query: 1   MQQMYP----PTMKHYS-PLS---RKEPKLHAAHKHRLAEQNRRNRISGQYATLRAILPT 60
           M Q+YP    P +  YS P+S   RKEPKL+AA KHRLAEQNRRNRISGQYATLRAILP+
Sbjct: 13  MHQIYPQAQAPMINPYSCPISSFPRKEPKLNAAVKHRLAEQNRRNRISGQYATLRAILPS 72

Query: 61  LISKTEKSKFKKAFVLSETIRRVKELKKVASEKRAAM-------VPSGADRLSLEQCNGN 120
           L SKT+KSK KKAFVLSETIR VKELKK+ SEKR A        +PSGADRL+LEQCNG 
Sbjct: 73  L-SKTDKSKLKKAFVLSETIRGVKELKKLVSEKRVANREFRDCGIPSGADRLTLEQCNGG 132

Query: 121 GVEGTVKAVMSCEDRQEIMAELGKALKAVKMKVVRAEMVTVGGRNKFALWLEGPKQGPVA 180
             EG VKAVMSCEDRQ+IMAEL KALK +K+K+VRAEMVTVGGRNKF+LW++GPK+G   
Sbjct: 133 --EGMVKAVMSCEDRQDIMAELAKALKTMKVKLVRAEMVTVGGRNKFSLWIQGPKEGH-G 192

Query: 181 ALKRALEAVMKRPSWIARKPKSDWLNPLPIANKY 200
            +KR LEAVMKRPSWIARKP++ W +     N +
Sbjct: 193 GIKRVLEAVMKRPSWIARKPRNVWQSRASTDNNF 222

[Close]

BLAST of Sed0020657 vs. TAIR 10
Match: AT4G38070.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 108.2 bits (269), Expect = 7.7e-24
Identity = 73/167 (43.71%), Postives = 100/167 (59.88%), Query Frame = 0


Query: 14   PLSRKEPKLHAAHKHRLAEQNRRNRISGQYATLRAILPTLISKTEKSKFKKAFVLSETIR 73
            P S+ E K  AA KH  AE+ RR RI+ Q+ATLR ILP L+      K  KA VL ET+R
Sbjct: 1339 PKSKTESKEVAAKKHSDAERRRRLRINSQFATLRTILPNLV------KQDKASVLGETVR 1398

Query: 74   RVKELKKVASEKRAAMVPSGADRLSLEQCNGNGVEGTVKAVMSCEDRQEIMAELGKALKA 133
               ELKK+  +      PS  D L L+ CN N      + V SC DR+ +M+E+ +++KA
Sbjct: 1399 YFNELKKMVQD--IPTTPSLEDNLRLDHCNNN--RDLARVVFSCSDREGLMSEVAESMKA 1458

Query: 134  VKMKVVRAEMVTVGGRNKFALWLEGPKQGP-VAALKRALEAVMKRPS 180
            VK K VRAE++TVGGR K AL+++G      +  LK++L+ V+   S
Sbjct: 1459 VKAKAVRAEIMTVGGRTKCALFVQGVNGNEGLVKLKKSLKLVVNGKS 1495

[Close]

BLAST of Sed0020657 vs. TAIR 10
Match: AT1G68810.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 83.2 bits (204), Expect = 2.6e-16
Identity = 60/169 (35.50%), Postives = 98/169 (57.99%), Query Frame = 0


Query: 22  LHAAHKHRLAEQNRRNRISGQYATLRAILPTLISKTEKSKFKKAFVLSETIRRVKELKKV 81
           L A+  H  AE+ RR RI+   A LR+ILP        +K  KA +L+E I+ VKELK+ 
Sbjct: 172 LAASKSHSEAERRRRERINNHLAKLRSILP------NTTKTDKASLLAEVIQHVKELKRE 231

Query: 82  ASE-KRAAMVPSGADRLSL----EQCNGNGVEGTVKAVMSCEDRQEIMAELGKALKAVKM 141
            S      +VP+ +D L++    E+  G+G    +KA + CEDR +++ ++ K LKA+++
Sbjct: 232 TSVISETNLVPTESDELTVAFTEEEETGDG-RFVIKASLCCEDRSDLLPDMIKTLKAMRL 291

Query: 142 KVVRAEMVTVGGRNKFALWLEGPKQGP--------VAALKRALEAVMKR 178
           K ++AE+ TVGGR K  L++ G +           +  ++ AL+AVM++
Sbjct: 292 KTLKAEITTVGGRVKNVLFVTGEESSGEEVEEEYCIGTIEEALKAVMEK 333

[Close]

BLAST of Sed0020657 vs. TAIR 10
Match: AT2G41130.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 75.9 bits (185), Expect = 4.2e-14
Identity = 58/184 (31.52%), Postives = 98/184 (53.26%), Query Frame = 0


Query: 5   YPPTMKHYSPLSRKEPKLHAAHKHRLAEQNRRNRISGQYATLRAILPTLISKTEKSKFKK 64
           YP  +        ++  L A   H+ AE+ RR RI+     LR +L         SK  K
Sbjct: 48  YPLAISGIGETMAQDRALAALRNHKEAERRRRERINSHLNKLRNVLSC------NSKTDK 107

Query: 65  AFVLSETIRRVKELKK---VASEKRAAMVPSGADRLSLEQCNGNGVEGTV--KAVMSCED 124
           A +L++ ++RV+ELK+     S+    ++PS  D +S+        +G +  KA + CED
Sbjct: 108 ATLLAKVVQRVRELKQQTLETSDSDQTLLPSETDEISVLHFGDYSNDGHIIFKASLCCED 167

Query: 125 RQEIMAELGKALKAVKMKVVRAEMVTVGGRNKFALWLEGPKQ----GPVAALKRALEAVM 180
           R +++ +L + LK++ MK +RAEMVT+GGR +  L +   K+      V  L+ AL++++
Sbjct: 168 RSDLLPDLMEILKSLNMKTLRAEMVTIGGRTRSVLVVAADKEMHGVESVHFLQNALKSLL 225

[Close]

BLAST of Sed0020657 vs. TAIR 10
Match: AT3G25710.1 (basic helix-loop-helix 32 )

HSP 1 Score: 70.5 bits (171), Expect = 1.8e-12
Identity = 51/138 (36.96%), Postives = 83/138 (60.14%), Query Frame = 0


Query: 22  LHAAHKHRLAEQNRRNRISGQYATLRAILPTLISKTEKSKFKKAFVLSETIRRVKELKKV 81
           L A+  H  AE+ RR RI+   A LR+ILP        +K  KA +L+E I+ +KELK+ 
Sbjct: 130 LAASKSHSEAERRRRERINTHLAKLRSILP------NTTKTDKASLLAEVIQHMKELKRQ 189

Query: 82  ASE-KRAAMVPSGADRLSLEQCNGNGVEG--TVKAVMSCEDRQEIMAELGKALKAVKMKV 141
            S+      VP+  D L+++  + N  EG   ++A   C+DR ++M ++  ALK+++++ 
Sbjct: 190 TSQITDTYQVPTECDDLTVDS-SYNDEEGNLVIRASFCCQDRTDLMHDVINALKSLRLRT 249

Query: 142 VRAEMVTVGGRNKFALWL 157
           ++AE+ TVGGR K  L+L
Sbjct: 250 LKAEIATVGGRVKNILFL 260

[Close]

BLAST of Sed0020657 vs. TAIR 10
Match: AT3G56770.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 69.3 bits (168), Expect = 3.9e-12
Identity = 56/170 (32.94%), Postives = 95/170 (55.88%), Query Frame = 0


Query: 18  KEPKLHAAHKHRLAEQNRRNRISGQYATLRAILPTLISKTEKSKFKKAFVLSETIRRVKE 77
           ++  L +   H+ AE+ RR RI+     LR +L +  SKT+KS      +L++ ++RVKE
Sbjct: 39  EDKALASLRNHKEAERKRRARINSHLNKLRKLL-SCNSKTDKST-----LLAKVVQRVKE 98

Query: 78  LKKVASEKRAAMVPSGADRLS---LEQCN-GNGVEGTVKAVMSCEDRQEIMAELGKALKA 137
           LK+   E     +PS  D +S   +E C+ G+      K    CEDR E++ +L + LK+
Sbjct: 99  LKQQTLEITDETIPSETDEISVLNIEDCSRGDDRRIIFKVSFCCEDRPELLKDLMETLKS 158

Query: 138 VKMKVVRAEMVTVGGRNKFALWLEGPKQ----GPVAALKRALEAVMKRPS 180
           ++M+ + A+M TVGGR +  L +   K+      V  L+ AL+++++R S
Sbjct: 159 LQMETLFADMTTVGGRTRNVLVVAADKEHHGVQSVNFLQNALKSLLERSS 202

The following BLAST results are available for this feature:

BLAST of Sed0020657 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023518416.1	2.1e-71	73.68	transcription factor bHLH131-like [Cucurbita pepo subsp. pepo]	[more]
XP_022962807.1	6.0e-71	73.21	transcription factor bHLH131-like [Cucurbita moschata]	[more]
KAG6594901.1	7.8e-71	73.21	Transcription factor basic helix-loop-helix 131, partial [Cucurbita argyrosperma...	[more]
KAG7026866.1	1.0e-70	73.21	Transcription factor bHLH, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023004035.1	1.7e-70	73.21	transcription factor bHLH131-like [Cucurbita maxima]	[more]

BLAST of Sed0020657 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0CB25	1.1e-22	43.71	Transcription factor bHLH131 OS=Arabidopsis thaliana OX=3702 GN=BHLH131 PE=2 SV=...	[more]
Q9S7Y1	3.7e-15	35.50	Transcription factor bHLH30 OS=Arabidopsis thaliana OX=3702 GN=BHLH30 PE=1 SV=1	[more]
O80674	5.9e-13	31.52	Transcription factor bHLH106 OS=Arabidopsis thaliana OX=3702 GN=BHLH106 PE=2 SV=...	[more]
Q9LS08	2.5e-11	36.96	Transcription factor AIG1 OS=Arabidopsis thaliana OX=3702 GN=BHLH32 PE=1 SV=1	[more]
Q9LET0	5.6e-11	32.94	Putative transcription factor bHLH107 OS=Arabidopsis thaliana OX=3702 GN=BHLH107...	[more]

BLAST of Sed0020657 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HDK5	2.9e-71	73.21	transcription factor bHLH131-like OS=Cucurbita moschata OX=3662 GN=LOC111463190 ...	[more]
A0A6J1KTG6	8.5e-71	73.21	transcription factor bHLH131-like OS=Cucurbita maxima OX=3661 GN=LOC111497466 PE...	[more]
A0A6J1BVR4	7.9e-69	73.08	transcription factor bHLH131 OS=Momordica charantia OX=3673 GN=LOC111005800 PE=4...	[more]
A0A5D3CNR8	3.8e-63	68.69	Transcription factor bHLH131-like protein OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A1S3B0Y8	3.8e-63	68.69	transcription factor bHLH131-like OS=Cucumis melo OX=3656 GN=LOC103484938 PE=4 S...	[more]

BLAST of Sed0020657 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38070.1	7.7e-24	43.71	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G68810.1	2.6e-16	35.50	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT2G41130.1	4.2e-14	31.52	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G25710.1	1.8e-12	36.96	basic helix-loop-helix 32	[more]
AT3G56770.1	3.9e-12	32.94	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 29..84 e-value: 3.9E-4 score: 29.7
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 27..78 e-value: 1.7E-6 score: 27.9
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 23..78 score: 11.940886
None	No IPR available	GENE3D	3.30.70.260		coord: 113..179 e-value: 1.5E-5 score: 26.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	PANTHER	PTHR45844:SF17	TRANSCRIPTION FACTOR BHLH131	coord: 12..180
None	No IPR available	PANTHER	PTHR45844	TRANSCRIPTION FACTOR BHLH30	coord: 12..180
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 26..83 e-value: 3.6E-9 score: 38.7
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 27..81

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0020657.1	Sed0020657.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity